prot_D-herbacea_F_contig109.776.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig109.776.1
Unique Nameprot_D-herbacea_F_contig109.776.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length213
Homology
BLAST of mRNA_D-herbacea_F_contig109.776.1 vs. uniprot
Match: D7G3H8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3H8_ECTSI)

HSP 1 Score: 171 bits (433), Expect = 1.680e-45
Identity = 95/193 (49.22%), Postives = 115/193 (59.59%), Query Frame = 0
Query:    1 MVMFESLDADCDGVLCREELDAFLRTTEGLPLRDDVYCWLVQNYSSCPRPP-----NASNPMGTP-------------------LGPSQTEN------------ARTTDLCLTRRGFVDMYRCMWQASGRAIQVVLRDLRLAGCSSIDHPTAPQRRVSVVISMHSDTPGFDLVAQPPDPALHEAALTLATKRW 157
            M MFE LDADCDGVLCREELDAFLRTTEG+PL+DDVY WLV+++SSCPRP      + S    TP                     P+  E+                DLCLTR GFV+MYR +WQA+GR   VV+RDLR A C       + + R SVV+++HSD  GFD +AQPPDP L EAA+ L  +RW
Sbjct:  802 MTMFEGLDADCDGVLCREELDAFLRTTEGIPLQDDVYVWLVRSFSSCPRPSVLKDTHVSGHAETPRRVGAKGRRRPQRQGRASRAPPAGIEDDGGCDGCHGGGGVHDVDLCLTRHGFVEMYRYIWQAAGRDFGVVMRDLRFAECHDA---RSEENRPSVVVAVHSDVQGFDFLAQPPDPELLEAAVALPIQRW 991          
BLAST of mRNA_D-herbacea_F_contig109.776.1 vs. uniprot
Match: A0A835ZL00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL00_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.420e-13
Identity = 48/132 (36.36%), Postives = 63/132 (47.73%), Query Frame = 0
Query:    3 MFESLDADCDGVLCREELDAFLRTTEGLPLRDDVYCWLVQNYSSCPRPPNASNPMGTPLGPSQTENARTTDLCLTRRGFVDMYRCMWQASGRAIQVVLRDLRLAG--CSSIDHPTAPQRRVSVVISMHSDTP 132
            +FE LDADCDGVL REEL  FL  TEG  L D  + WL+ ++ S                          D  LTR G +  YR MWQ +GR  +V+ RDLR  G    ++    AP R  +  + +H+  P
Sbjct:  693 VFEDLDADCDGVLSREELAGFLAATEGAALEDGAHAWLLSHFDS-------------------------RDGGLTRAGLLQAYRFMWQDAGRDARVLTRDLRRFGFDARALSRAAAP-RSAAAALVVHASAP 798          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig109.776.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G3H8_ECTSI1.680e-4549.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZL00_9STRA1.420e-1336.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 1..109
e-value: 2.1E-6
score: 29.9
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 8..20
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 1..30
score: 10.19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig109contigD-herbacea_F_contig109:644693..650442 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig109.776.1mRNA_D-herbacea_F_contig109.776.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig109 643875..650463 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig109.776.1 ID=prot_D-herbacea_F_contig109.776.1|Name=mRNA_D-herbacea_F_contig109.776.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=213bp
MVMFESLDADCDGVLCREELDAFLRTTEGLPLRDDVYCWLVQNYSSCPRP
PNASNPMGTPLGPSQTENARTTDLCLTRRGFVDMYRCMWQASGRAIQVVL
RDLRLAGCSSIDHPTAPQRRVSVVISMHSDTPGFDLVAQPPDPALHEAAL
TLATKRWPRMAHRIVGGIAGGDDEPRSIKEKQPADTSPSSSSSSSSPPSS
SPSLVNSLEKPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS