prot_D-herbacea_F_contig107.678.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig107.678.1
Unique Nameprot_D-herbacea_F_contig107.678.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length267
Homology
BLAST of mRNA_D-herbacea_F_contig107.678.1 vs. uniprot
Match: D7FRV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV5_ECTSI)

HSP 1 Score: 243 bits (621), Expect = 2.310e-72
Identity = 121/200 (60.50%), Postives = 155/200 (77.50%), Query Frame = 0
Query:   32 PPKHRPKAKAAGLRVIGSTAFLADWIGGSELKREGLCFAKYVAGVYTVLPGEALDQAVAEMADLEAPWEALTREGG---CYCKGKILLLVVDMLTYPRPVRKFEVLLEKDMDLLTLREMIFAQVKVESLSKLVLLTKGRPLGHEKNKLSLADLGFKNRQQLVVSQVLGGKPQDETGIEEKNRQFVGDLLFGGTTPSDASS 228
            PPKH PK  A+GLRVIG  AF+ADW+G  E++    C+ KY+AGV+ +   E LD+AV+ M+++E PW  +  E G   CYCKGK++L VVDMLTYPRPVRKFEVL+E  M LL LRE++   VK+ES +KLVLLT+GR +G EKN  +L +LGFKNRQQ+VVSQVLGG   D++G EEKNRQFVGDLLFGG+TP++A++
Sbjct:  112 PPKHSPKPTASGLRVIGDKAFMADWVGWPEMQMRWPCYVKYLAGVFALQQTEVLDRAVSAMSEIEEPWRPVPPEPGDRGCYCKGKLILKVVDMLTYPRPVRKFEVLVEDQMSLLGLREIMLVNVKLESATKLVLLTRGRAIGPEKNNHTLQELGFKNRQQVVVSQVLGGPSTDDSGTEEKNRQFVGDLLFGGSTPNEATA 311          
BLAST of mRNA_D-herbacea_F_contig107.678.1 vs. uniprot
Match: A0A6H5JCE8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCE8_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 9.840e-60
Identity = 105/179 (58.66%), Postives = 140/179 (78.21%), Query Frame = 0
Query:   53 LADWIGGSELKREGLCFAKYVAGVYTVLPGEALDQAVAEMADLEAPWEALTREGG---CYCKGKILLLVVDMLTYPRPVRKFEVLLEKDMDLLTLREMIFAQVKVESLSKLVLLTKGRPLGHEKNKLSLADLGFKNRQQLVVSQVLGGKPQDETGIEEKNRQFVGDLLFGGTTPSDASS 228
            +ADW+G  E++    C+ KY+AGV+ + P E LD+AV+ M+++E PW  +  E G   CYCKGK++L VVDMLTYPRPVRKFEVL+E  M LL LRE++   VK+ES +KLVLLT+GR +G EKN  +L +LGFKN+QQ+VVSQVLGG   +++G EEKNRQFVGDLLFGG+TP++A++
Sbjct:    1 MADWVGWPEMQMRWPCYVKYLAGVFALQPTEVLDRAVSAMSEIEEPWRPMPPEPGDRGCYCKGKLILKVVDMLTYPRPVRKFEVLVEDQMSLLGLREIMLVNVKLESATKLVLLTRGRAIGPEKNNHTLQELGFKNKQQVVVSQVLGGPSTNDSGTEEKNRQFVGDLLFGGSTPNEATA 179          
BLAST of mRNA_D-herbacea_F_contig107.678.1 vs. uniprot
Match: A0A835ZFQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFQ4_9STRA)

HSP 1 Score: 107 bits (266), Expect = 1.720e-22
Identity = 55/111 (49.55%), Postives = 81/111 (72.97%), Query Frame = 0
Query:  109 YCKGKILLLVVDMLTYPRPVRKFEVLLEKDMDLLTLREMIFAQVKVESLSKLVLLTKGRPLGHEKNKLSLADLGFKNRQQLVVSQVLGGKPQDETGIEEKNRQFVGDLLFG 219
            YC+GK+ +  VD LTYPRP RKF +LL++ M L  LREM+ A+  ++S ++LVLL +GRP+  EK+ ++LADL  K+   + +S+ LG   +++ G +EKN+QFVGDLLFG
Sbjct:  215 YCQGKLNVRFVDTLTYPRPARKFRLLLDRSMLLGALREMMAAEAGLDSAAQLVLLYRGRPVPREKDYMTLADLDVKSNGMIAISRTLGASVEED-GADEKNKQFVGDLLFG 324          
BLAST of mRNA_D-herbacea_F_contig107.678.1 vs. uniprot
Match: A0A4D9CSN0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSN0_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 1.690e-15
Identity = 54/123 (43.90%), Postives = 77/123 (62.60%), Query Frame = 0
Query:  109 YCKGKILLLVVDMLTYPRPVRKFEVLLEKDMDLLTLREMIFAQVKVESLSKLVLLTKGRPL--------GHEKNKLSLADLGFKNRQQLVVSQVLGGKPQ--DETGIEEKNRQFVGDLLFGGT 221
            +C  K+ +  VDMLTYPRPVRKF +LL K M + +LREM++ +V +E  + L +  + R L        G E++ L    +G ++  Q+VVS+VLGG  +  D  G+  KN+QFVGDLLFG T
Sbjct:  272 FCADKVFVRFVDMLTYPRPVRKFSMLLSKRMRIGSLREMLWREVGLEKEALLEIRIRNRRLTAGQGDAGGGEEDTLEA--VGIRDGVQVVVSKVLGGDGEEGDRAGVNAKNKQFVGDLLFGQT 392          
BLAST of mRNA_D-herbacea_F_contig107.678.1 vs. uniprot
Match: A0A7S2RBA8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RBA8_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 8.630e-6
Identity = 29/62 (46.77%), Postives = 46/62 (74.19%), Query Frame = 0
Query:  109 YCKGKILLLVVDMLTYPRPVRKFEVLLEKDMDLLTLREMIFAQVKV-ESLSKLVLLTKGRPL 169
            YC+ K+ L  VDMLTYPRP+R+F +L+  DM L +LR+++  +V + +S  +LV+L +G+PL
Sbjct:  201 YCRDKLRLRFVDMLTYPRPIRQFWMLINGDMRLGSLRDLLAIEVNMSDSAEELVMLLRGKPL 262          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig107.678.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FRV5_ECTSI2.310e-7260.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCE8_9PHAE9.840e-6058.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZFQ4_9STRA1.720e-2249.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CSN0_9STRA1.690e-1543.90Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2RBA8_9STRA8.630e-646.77Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig107contigD-herbacea_F_contig107:396120..417655 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig107.678.1mRNA_D-herbacea_F_contig107.678.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig107 396119..417655 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig107.678.1 ID=prot_D-herbacea_F_contig107.678.1|Name=mRNA_D-herbacea_F_contig107.678.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=267bp
EAKVDVAPPPPANSPSHPPPSGGGGGKAKAKPPKHRPKAKAAGLRVIGST
AFLADWIGGSELKREGLCFAKYVAGVYTVLPGEALDQAVAEMADLEAPWE
ALTREGGCYCKGKILLLVVDMLTYPRPVRKFEVLLEKDMDLLTLREMIFA
QVKVESLSKLVLLTKGRPLGHEKNKLSLADLGFKNRQQLVVSQVLGGKPQ
DETGIEEKNRQFVGDLLFGGTTPSDASSSAQKLSKRTSSPSPPSSITSPT
MASTVLPPPPPPPPPPP
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