prot_D-herbacea_F_contig107.677.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig107.677.1
Unique Nameprot_D-herbacea_F_contig107.677.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length470
Homology
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BLAST of mRNA_D-herbacea_F_contig107.677.1 vs. uniprot
Match: D7FRV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV5_ECTSI)

HSP 1 Score: 84.3 bits (207), Expect = 1.280e-13
Identity = 41/57 (71.93%), Postives = 48/57 (84.21%), Query Frame = 0 
Query:    1 GRVPSVIANHGFQVLGKTLTRLARAQVAAAWKLELKAREYEARLLKELEAEEGAGDD 57
            GRVPS+ ANHGFQVLG+TL+RLAR  +A AWK ELKAREYE+ LLKELEAE+G   +
Sbjct:  513 GRVPSLFANHGFQVLGQTLSRLARGNIAQAWKAELKAREYESSLLKELEAEQGGAGE 569
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BLAST of mRNA_D-herbacea_F_contig107.677.1 vs. uniprot
Match: A0A6H5JCE8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCE8_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 2.150e-13
Identity = 41/57 (71.93%), Postives = 48/57 (84.21%), Query Frame = 0 
Query:    1 GRVPSVIANHGFQVLGKTLTRLARAQVAAAWKLELKAREYEARLLKELEAEEGAGDD 57
            GRVPS+ ANHGFQVLG+TL+RLAR  +A AWK ELKAREYE+ LLKELEAE+G   +
Sbjct:  382 GRVPSLFANHGFQVLGQTLSRLARRNIAQAWKAELKAREYESSLLKELEAEQGGAGE 438
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig107.677.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FRV5_ECTSI1.280e-1371.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCE8_9PHAE2.150e-1371.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 106..155
NoneNo IPR availableCOILSCoilCoilcoord: 299..319
NoneNo IPR availableCOILSCoilCoilcoord: 69..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig107contigD-herbacea_F_contig107:383588..395870 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig107.677.1mRNA_D-herbacea_F_contig107.677.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig107 383587..395870 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig107.677.1 ID=prot_D-herbacea_F_contig107.677.1|Name=mRNA_D-herbacea_F_contig107.677.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=470bp
GRVPSVIANHGFQVLGKTLTRLARAQVAAAWKLELKAREYEARLLKELEA
EEGAGDDEAGCSKRRGKKAKKKERDKKRREEEKRLQAEEDAKRELLRQEK
VKLAEQRVVEERRARVLQERAEHERQEAQWKLAQERRQLAERDQLEAQMA
FLRVQDDKNASLAKIAAAAAQETTGRAISNPPAGAGGKGKEKGPKWQQGQ
KQEQQRRQGGGQAATAHQQYAGTGSGTAPGSGSDQRSRYQQQQQQQQQQQ
QQQHGYEGGAAHVANGGNHASRRIIAVSSNGSANISDTISQFAGISQQHH
QQQQQQQQQQQQQQQQQQQHSPPASVPASAAAAPPPVGSSSSSSSSSSSP
GSNCSSSVVASSPNHQQNQQRHAHAHVPPGPIGPPPTCTAGRNTATAAVT
SLQHPAGHHHQQQQQPATTTSTGYAIAHLSSSAPLVMSRVVGPVPSSHEL
APSRGVTAAMMSVPPSASAA
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