prot_D-herbacea_F_contig107.675.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig107.675.1
Unique Nameprot_D-herbacea_F_contig107.675.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length91
Homology
BLAST of mRNA_D-herbacea_F_contig107.675.1 vs. uniprot
Match: D7FRV6_ECTSI (Complex1_LYR_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRV6_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 2.020e-41
Identity = 71/87 (81.61%), Postives = 78/87 (89.66%), Query Frame = 0
Query:    1 MAQPSRAAVLGLYKGLRRQGARLMDYNYREYALRRARTGFEMARGYAPADAAAAFITGQQQLEVVRRQATISELYPHQTSVMETMLP 87
            MAQPSR AVLGLYKGLRRQGA LMDYNYREYALRRAR GFE+ARG+AP +A AAF  GQ++LE+VRRQA IS+LYPHQTSVMETM P
Sbjct:    1 MAQPSRTAVLGLYKGLRRQGALLMDYNYREYALRRARRGFELARGFAPEEAEAAFKKGQRELEIVRRQAAISQLYPHQTSVMETMTP 87          
BLAST of mRNA_D-herbacea_F_contig107.675.1 vs. uniprot
Match: A0A7S2P523_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P523_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 5.360e-15
Identity = 37/76 (48.68%), Postives = 53/76 (69.74%), Query Frame = 0
Query:    8 AVLGLYKGLRRQGARLMDYNYREYALRRARTGFEMARGYAPADAAAAFITGQQQLEVVRRQATISELYPHQTSVME 83
            AV  LY+ L R+  RL DYN+R YA+RR + GFE+ R  A  +  AA   G++QL++++RQ+TI ++YP  TSVME
Sbjct:   32 AVKSLYRSLAREAKRLSDYNFRTYAIRRVKKGFELNRNLAGLEINAAIEDGKRQLDMLKRQSTIGQMYPGATSVME 107          
BLAST of mRNA_D-herbacea_F_contig107.675.1 vs. uniprot
Match: W7TGY8_9STRA (Complex 1 LYR protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TGY8_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 3.910e-13
Identity = 38/79 (48.10%), Postives = 50/79 (63.29%), Query Frame = 0
Query:    2 AQPSRAAVLGLYKGLRRQGARLMDYNYREYALRRARTGFEMARGYAPADAAAAFITGQQQLEVVRRQATISELYPHQTS 80
            A PSR  VLGL++ L RQ  RL DYN+R YA RR   GF+  R  +  +AA  +  G + LE+++RQA IS LYP + S
Sbjct:   17 ATPSRQHVLGLFRSLLRQAGRLEDYNFRSYAKRRVALGFQEGRSSSGEEAAREYRDGVKNLEMLKRQALISHLYPSKRS 95          
BLAST of mRNA_D-herbacea_F_contig107.675.1 vs. uniprot
Match: A0A1Y2GLY9_9FUNG (Complex1_LYR_dom domain-containing protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GLY9_9FUNG)

HSP 1 Score: 68.2 bits (165), Expect = 5.600e-13
Identity = 40/80 (50.00%), Postives = 50/80 (62.50%), Query Frame = 0
Query:    6 RAAVLGLYKGLRRQGARLMDYNYREYALRRARTGFEMARGYAPADAAAAFI-TGQQQLEVVRRQATISELYPHQTSVMET 84
            RA VLGLY+ L    +R   YN+R+YA+RR R GF  A+     D   A I   QQQLEVV+RQA IS+LY  +  V+ET
Sbjct:   11 RAQVLGLYRNLLHYSSRFAAYNFRDYAIRRTRDGFHAAKNETDPDKIQALIHKAQQQLEVVKRQAFISQLYSGEKLVLET 90          
BLAST of mRNA_D-herbacea_F_contig107.675.1 vs. uniprot
Match: A0A8J5XP77_DIALT (Complex1_LYR_dom domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XP77_DIALT)

HSP 1 Score: 65.1 bits (157), Expect = 6.410e-12
Identity = 40/79 (50.63%), Postives = 46/79 (58.23%), Query Frame = 0
Query:    6 RAAVLGLYKGLRRQGARLMDYNYREYALRRARTGFEMARGYA-PADAAAAFITGQQQLEVVRRQATISELYPHQTSVME 83
            R  VL L+K L R       YN+REYALRR R GF    G + PA  A     G +QLEVVR+QA IS+LYP    VME
Sbjct:    4 RTQVLALFKKLMRASRSFTHYNFREYALRRVRLGFREKAGVSDPAQIAELVGEGSKQLEVVRKQALISQLYPQARHVME 82          
BLAST of mRNA_D-herbacea_F_contig107.675.1 vs. uniprot
Match: A0A0C2GDP2_9BILA (Complex 1 protein (Fragment) n=1 Tax=Ancylostoma duodenale TaxID=51022 RepID=A0A0C2GDP2_9BILA)

HSP 1 Score: 65.1 bits (157), Expect = 1.160e-11
Identity = 38/86 (44.19%), Postives = 52/86 (60.47%), Query Frame = 0
Query:    2 AQPSRAAVLGLYKGLRRQGARLMDYNYREYALRRARTGFEMARGYA-PADAAAAFITGQQQLEVVRRQATISELYPHQTSVMETML 86
            AQ +++  + LYK L R+ A+   YN R +A RR R  FE  RG   PA        G++QLEV+RRQ  IS+LYPH+ +V+E  L
Sbjct:    3 AQVAKSVWVNLYKQLEREAAKFPQYNIRVFAQRRIREHFEANRGVTDPAVQKELLKKGKEQLEVIRRQVVISQLYPHKKTVVEAQL 88          
BLAST of mRNA_D-herbacea_F_contig107.675.1 vs. uniprot
Match: A0A7S1G6K1_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G6K1_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 2.110e-11
Identity = 40/80 (50.00%), Postives = 48/80 (60.00%), Query Frame = 0
Query:    5 SRAAVLGLYKGLRRQGARLMDYNYREYALRRARTGFEMARGYAPADAAAAFITGQQQLEVVRRQATISELYPHQ-TSVME 83
            +R+  + LY+   R+     DYN+REYALRRAR GFE  R  +   AAAA   G   LEV+RRQA IS LY     SVME
Sbjct:    6 ARSQAISLYRSFVREAKGFKDYNFREYALRRARAGFEENRAASGDAAAAALAEGNAALEVLRRQALISSLYTKGGASVME 85          
BLAST of mRNA_D-herbacea_F_contig107.675.1 vs. uniprot
Match: A0A1G4IP04_9SACH (LADA_0A05622g1_1 n=1 Tax=Lachancea dasiensis TaxID=1072105 RepID=A0A1G4IP04_9SACH)

HSP 1 Score: 62.4 bits (150), Expect = 9.630e-11
Identity = 33/86 (38.37%), Postives = 54/86 (62.79%), Query Frame = 0
Query:    1 MAQPSRAAVLGLYKGLRRQGARLMDYNYREYALRRARTGFEMARGYAPADAAA-AFITGQQQLEVVRRQATISELYPHQTSVMETM 85
            M  PSR+ VL LYK + +  +   +Y+YR Y LR+A+TGF + R     +A   AF++ Q++L V++RQ+ IS++Y     V+E +
Sbjct:    1 MPAPSRSQVLALYKQIIKNASNFNNYSYRNYFLRKAKTGFRVTRDLKDPEAVEEAFVSAQRELGVLKRQSAISQMYTFDKQVVEPL 86          
BLAST of mRNA_D-herbacea_F_contig107.675.1 vs. uniprot
Match: A0A1E7FPY9_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FPY9_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 1.510e-10
Identity = 36/85 (42.35%), Postives = 51/85 (60.00%), Query Frame = 0
Query:    1 MAQPSRAAVLGLYKGLRRQGARLMDYNYREYALRRARTGFEMARGYAPADAAAAFITGQQQLEVVRRQATISELYPHQTSVMETM 85
            M+QP     + L++ L +Q  ++ DYN+R YA+RR R GF+  R      A  A   GQ+QL V+ RQ+ IS LYP   SVM+T+
Sbjct:    1 MSQPQ----IVLFRNLMKQATQMNDYNFRAYAIRRIRGGFDQNRLLEGNTAQMAIKEGQEQLAVLTRQSVISRLYPSAKSVMDTL 81          
BLAST of mRNA_D-herbacea_F_contig107.675.1 vs. uniprot
Match: UPI00035A1C09 (LYR motif-containing protein 4 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00035A1C09)

HSP 1 Score: 61.6 bits (148), Expect = 1.670e-10
Identity = 34/85 (40.00%), Postives = 52/85 (61.18%), Query Frame = 0
Query:    1 MAQPSRAAVLGLYKGLRRQGARLMDYNYREYALRRARTGFEMARGYAPADAAAAFIT-GQQQLEVVRRQATISELYPHQTSVMET 84
            MA  +R  VL LYK L ++  R+ DYN+R YALRR R  F+  +    A    A +   Q+ LE++RRQAT+S+L+  +  ++E+
Sbjct:    1 MAASTRTKVLSLYKELLKESKRVTDYNFRNYALRRTRDAFKENKAITDAGQIQALVVKAQENLEMLRRQATVSQLFGSEKLIIES 85          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig107.675.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRV6_ECTSI2.020e-4181.61Complex1_LYR_dom domain-containing protein n=2 Tax... [more]
A0A7S2P523_9STRA5.360e-1548.68Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
W7TGY8_9STRA3.910e-1348.10Complex 1 LYR protein n=1 Tax=Nannochloropsis gadi... [more]
A0A1Y2GLY9_9FUNG5.600e-1350.00Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A8J5XP77_DIALT6.410e-1250.63Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A0C2GDP2_9BILA1.160e-1144.19Complex 1 protein (Fragment) n=1 Tax=Ancylostoma d... [more]
A0A7S1G6K1_9STRA2.110e-1150.00Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A1G4IP04_9SACH9.630e-1138.37LADA_0A05622g1_1 n=1 Tax=Lachancea dasiensis TaxID... [more]
A0A1E7FPY9_9STRA1.510e-1042.35Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
UPI00035A1C091.670e-1040.00LYR motif-containing protein 4 n=1 Tax=Aplysia cal... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR proteinPFAMPF05347Complex1_LYRcoord: 8..62
e-value: 6.8E-8
score: 32.4
NoneNo IPR availablePANTHERPTHR13166PROTEIN C6ORF149coord: 1..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig107contigD-herbacea_F_contig107:371574..379559 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig107.675.1mRNA_D-herbacea_F_contig107.675.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig107 371491..381296 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig107.675.1 ID=prot_D-herbacea_F_contig107.675.1|Name=mRNA_D-herbacea_F_contig107.675.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=91bp
MAQPSRAAVLGLYKGLRRQGARLMDYNYREYALRRARTGFEMARGYAPAD
AAAAFITGQQQLEVVRRQATISELYPHQTSVMETMLPLKP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008011Complex1_LYR