prot_D-herbacea_F_contig107.665.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig107.665.1
Unique Nameprot_D-herbacea_F_contig107.665.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length372
Homology
BLAST of mRNA_D-herbacea_F_contig107.665.1 vs. uniprot
Match: A0A126X2D5_9PHAE (Putative LOV domain-containing protein n=1 Tax=Scytosiphon dotyi TaxID=180438 RepID=A0A126X2D5_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 5.730e-33
Identity = 150/388 (38.66%), Postives = 181/388 (46.65%), Query Frame = 0
Query:   18 GGAGGAWSDAGGATPLPPVFGNANAQGGDALGDMGFKGINLDDVFSGVFFSPEGDLLDIPSEDDEEGNSLNLTLSSATISDGARHPQFAQFAVLGGSAGRESVSDLEQFMTPLYKPEEEQRQLEGMIDAPPSSATHEASAVQQQAAAGITVQASSAERTSVGGDQAPVLAPAALGTVAGGTSSARTPLQVEVGAVLPMENTAAAVEAGAQAMRTAQETAVAQAAETARAPAVHAQQAHAPVHIGGPIAGKVDPSATAATATVGVLPTGGITGPLGPHGARASPL----PTMAAGWGMGRGARGKAAAVATV-----GSGGVSGSL-------------------------ARGAYSGRVGGGSAAAPRRQRHKVSSKDLTEEQRIERR 371
            G AGG    A G  PLPP+FGNANA+ GD      FKGINLDDVFSGVFFSPEGDLLDIPS+ D+   SLNLTLSSA+IS+GA HPQFAQFAVL G     + +D E  +  L    +   QL+ ++ A               AA G +V                         V G  +                +      +A     R AQ+ AV++A +     AV A QA+A   +  P+ G    S    TA    LPTGGI GPL PHGA  +P     PT          A G A  + +      G G + G +                          RGAY+G   G S+  PRRQRHKVSSKDLTEEQRIERR
Sbjct:   26 GSAGGEVPWATGDAPLPPIFGNANAEAGDE-----FKGINLDDVFSGVFFSPEGDLLDIPSDGDD---SLNLTLSSASISEGASHPQFAQFAVLRGGDEGAAGADAEAAL--LNPARDSSHQLQDLLGA--------------GAAGGSSV-------------------------VGGSVTMDXXXXXXXXXXXXXXDXXXXXXQA-----RAAQDMAVSKAEQ-----AVKAAQAYAQAQMRTPLGGSGG-SGVGNTAGGLTLPTGGIVGPLAPHGALPAPAAAATPTATXXXXXXLPAAGGATGLPSSLPLPGGIGSLGGGVXXXXXXXXXXXXXXXXXXXXXXXAWGRGAYAGA--GASSGPPRRQRHKVSSKDLTEEQRIERR 351          
BLAST of mRNA_D-herbacea_F_contig107.665.1 vs. uniprot
Match: A0A6H5L7C4_9PHAE (BZIP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L7C4_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 1.700e-21
Identity = 59/87 (67.82%), Postives = 66/87 (75.86%), Query Frame = 0
Query:   31 TPLPPVFGNANAQGGDALGDMGFKG--INLDDVFSGVFFSPEGDLLDIPSEDDEEGNSLNLTLSSATISDGARHPQFAQFAVLGGSA 115
             PLPP+FGNANA+ G       FKG  +NLDDVFSGVFFSP+GDLLDIPS+ DE   SLNLTLSS +ISDG  H  FAQFAVL G+A
Sbjct:   29 APLPPIFGNANAEPGHE-----FKGMDLNLDDVFSGVFFSPDGDLLDIPSDGDE---SLNLTLSSTSISDGTTHTPFAQFAVLSGTA 107          
BLAST of mRNA_D-herbacea_F_contig107.665.1 vs. uniprot
Match: A0A126X308_SARHM (Putative LOV domain-containing protein n=2 Tax=Sargassum TaxID=3015 RepID=A0A126X308_SARHM)

HSP 1 Score: 99.8 bits (247), Expect = 3.650e-19
Identity = 54/104 (51.92%), Postives = 69/104 (66.35%), Query Frame = 0
Query:   30 ATPLPPVFGNANAQGGDALGDMGFKGINLDDVFSGVFFSPEGDLLDIPSEDDEEGNSLNLTLSSATISDGARHPQFAQFAVLGGSAGRESVSDLEQFMTPLYKP 133
            A P PPVFGNANA    +  +  F+GINLDD+FSGV F+P+G+LLDIPS+DDE   +LN+TLS+ +IS+G     FAQFAV+G +   E      QF   L  P
Sbjct:   29 AAPSPPVFGNANANRTGS--ETNFRGINLDDIFSGVLFTPDGELLDIPSDDDE---NLNITLSTTSISEGRAQTPFAQFAVVGDTFASEESGSSGQFQDVLISP 127          
BLAST of mRNA_D-herbacea_F_contig107.665.1 vs. uniprot
Match: A0A126WV07_9PHAE (Putative LOV domain-containing protein n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A126WV07_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 3.940e-17
Identity = 55/102 (53.92%), Postives = 64/102 (62.75%), Query Frame = 0
Query:   32 PLPPVFGNANAQGGDALGDMGFKGINLDDVFSGVFFSPEGDLLDIPSEDDEEGNSLNLTLSSATISDGA----------------RHPQFAQFAVLGGSAGR 117
            P PPVFGNAN Q     GDM FKG+NLDD+FSGVFFSPEGDLL +PS  DEE    NLTLSS+   +GA                + PQFAQ+AVLG +  +
Sbjct:   20 PSPPVFGNANGQ--TTSGDMMFKGMNLDDIFSGVFFSPEGDLLTLPS--DEEDALFNLTLSSSGGGEGAGSVAKMDGSAEDGDMGQQPQFAQYAVLGSAVSQ 117          
BLAST of mRNA_D-herbacea_F_contig107.665.1 vs. uniprot
Match: A0A126WXQ5_9PHAE (Putative LOV domain-containing protein n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A126WXQ5_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 1.770e-10
Identity = 44/48 (91.67%), Postives = 46/48 (95.83%), Query Frame = 0
Query:  324 VGSGGVSGSLARGAYSGRVGGGSAAAPRRQRHKVSSKDLTEEQRIERR 371
            +GSGGVSGSL RGAYSGR+GG SAAAPRRQRHKVSSKDLTEEQRIERR
Sbjct:    1 MGSGGVSGSLGRGAYSGRMGG-SAAAPRRQRHKVSSKDLTEEQRIERR 47          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig107.665.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A126X2D5_9PHAE5.730e-3338.66Putative LOV domain-containing protein n=1 Tax=Scy... [more]
A0A6H5L7C4_9PHAE1.700e-2167.82BZIP domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A126X308_SARHM3.650e-1951.92Putative LOV domain-containing protein n=2 Tax=Sar... [more]
A0A126WV07_9PHAE3.940e-1753.92Putative LOV domain-containing protein n=1 Tax=Ish... [more]
A0A126WXQ5_9PHAE1.770e-1091.67Putative LOV domain-containing protein n=1 Tax=Des... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig107contigD-herbacea_F_contig107:150749..158650 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig107.665.1mRNA_D-herbacea_F_contig107.665.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig107 150463..162780 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig107.665.1 ID=prot_D-herbacea_F_contig107.665.1|Name=mRNA_D-herbacea_F_contig107.665.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=372bp
MDELGGSSIQEKGGGGEGGAGGAWSDAGGATPLPPVFGNANAQGGDALGD
MGFKGINLDDVFSGVFFSPEGDLLDIPSEDDEEGNSLNLTLSSATISDGA
RHPQFAQFAVLGGSAGRESVSDLEQFMTPLYKPEEEQRQLEGMIDAPPSS
ATHEASAVQQQAAAGITVQASSAERTSVGGDQAPVLAPAALGTVAGGTSS
ARTPLQVEVGAVLPMENTAAAVEAGAQAMRTAQETAVAQAAETARAPAVH
AQQAHAPVHIGGPIAGKVDPSATAATATVGVLPTGGITGPLGPHGARASP
LPTMAAGWGMGRGARGKAAAVATVGSGGVSGSLARGAYSGRVGGGSAAAP
RRQRHKVSSKDLTEEQRIERR*
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