prot_D-herbacea_F_contig106.608.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig106.608.1
Unique Nameprot_D-herbacea_F_contig106.608.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length691
Homology
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BLAST of mRNA_D-herbacea_F_contig106.608.1 vs. uniprot
Match: D8LBP2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP2_ECTSI)

HSP 1 Score: 204 bits (518), Expect = 8.050e-54
Identity = 229/566 (40.46%), Postives = 276/566 (48.76%), Query Frame = 0 
Query:  148 MACMLYLRKK----RASTTKGHLA---------AATAGKANNEEEETGRVLPPSKYNAHYLSPRPAMAA--APAPFGSVGETAGNSISSCQAARIASS-----PSPFSAGMKRELDTFVKARPENTNDGGNSAAVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVADFQKLKASRRAALARVASRKHKESAQKQXXXXXXXXXXRRNDAEMAAGVALSQAAAVARVGSVAAEMRQRQRQMEEVRKAEECAKRERVAAVLAFDGANVDERERQVRTETYRRIQREERRRELVLQRQEDERMERMRLYEAGERYIAAAP-SLHLP-PHPPVHSARSFFSMTGSASVAETVGGDNDPTTAASSCASRECRVTDDIGPDG-----QVSAGVSKHSGVDSAPRVARHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHTLPQTATTTRAINATAEIGSNFAPPAHEGGGINPPVLLASAGAIRVPAVLSPTLSSXXXXXXXXXXXXXXXXXXXXXXXXXSQRP----RKRIAVTPVWKRPVVPLSKPYVPVPKK 682
            M CMLYLRKK    +  T   H+           A  G++  EE      L PSK    +    P  +A  APAPFGSVGET   +++     R   S     PSPFSAGM+RELD FV +RP++ +  G S+AV                                     TVAD ++LKASRRAALAR AS+  K      XXXXXXXXXX                    R   VAAE +QR+RQ+  VR+AE  AKRERVAAVLA+D A  DERER+VR ETY RI+REERRREL LQRQEDER+E MR+YEAGERY   +P +  LP P P VHSARSFFS+T SAS+AETV GDN P  A+S  ASR  +    + PD          G   +SG     R A                         XXXXXXXXXXXXXX                          P  + G      ++  +  +R P +LSPT  S                         +++     R+RI+ TPVWKRP VPLSKPYVPVP+K
Sbjct:    1 MECMLYLRKKARKKKVMTATTHVKDSATGQTGRVAALGESGKEEAPCAAALAPSKVECSFTPVPPPQSATMAPAPFGSVGETPKPAVTMSAGDRAPPSRTTGPPSPFSAGMERELDVFVMSRPKDKS--GMSSAVVLEAQRRARRRALSMQKRKTAEEERKAGALESAKKPPTVADIERLKASRRAALARAASQIQKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGSIVAAEKKQRERQLGLVRQAEAEAKRERVAAVLAYDEAQADERERRVRNETYARIRREERRRELALQRQEDERVEMMRMYEAGERYKGTSPVATVLPAPVPAVHSARSFFSITDSASIAETVVGDNGPGVASS--ASRRRKTWRRVDPDHIEEVQDALEGACSNSGGAQDVRKAELDALKSTHHQPQANQQGSTPAQHTXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXLPDDDSG-----EMVTVSRRLRKPPLLSPTRPSFSSRYARSASASATTGVAASAYGSRNRKQGALGRRRISTTPVWKRPAVPLSKPYVPVPQK 552
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig106.608.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBP2_ECTSI8.050e-5440.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 271..291
NoneNo IPR availableCOILSCoilCoilcoord: 320..342
NoneNo IPR availableCOILSCoilCoilcoord: 369..389

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig106contigD-herbacea_F_contig106:181498..184806 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig106.608.1mRNA_D-herbacea_F_contig106.608.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig106 181498..184806 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig106.608.1 ID=prot_D-herbacea_F_contig106.608.1|Name=mRNA_D-herbacea_F_contig106.608.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=691bp
SPDDNATFGLDGLSLIDRARALCAAADDVQRATIEASRRISAIHGSPERP
KRAKASRKKITKEPPDICSRPPSDVPPPRGEGWRRLGPVSVVRGSNRISA
QPQARRALTRETEVFVDGVRYCVVPAEIESGGGFCVSLDRDFEGETNMAC
MLYLRKKRASTTKGHLAAATAGKANNEEEETGRVLPPSKYNAHYLSPRPA
MAAAPAPFGSVGETAGNSISSCQAARIASSPSPFSAGMKRELDTFVKARP
ENTNDGGNSAAVREAQRRARRRAQMQQKREAAQQHRRYQRKTTKRKKPPT
VADFQKLKASRRAALARVASRKHKESAQKQEAEKAAAEEARRNDAEMAAG
VALSQAAAVARVGSVAAEMRQRQRQMEEVRKAEECAKRERVAAVLAFDGA
NVDERERQVRTETYRRIQREERRRELVLQRQEDERMERMRLYEAGERYIA
AAPSLHLPPHPPVHSARSFFSMTGSASVAETVGGDNDPTTAASSCASREC
RVTDDIGPDGQVSAGVSKHSGVDSAPRVARHHHHHQHAEQISSRRRRQRT
PPGVAAVHGAAATDRGGGNHTLPQTATTTRAINATAEIGSNFAPPAHEGG
GINPPVLLASAGAIRVPAVLSPTLSSSSSVGSGGGSSSSNNNSNNNNNNN
NSQRPRKRIAVTPVWKRPVVPLSKPYVPVPKKADDRFGAS*
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