prot_D-herbacea_F_contig1055.598.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig1055.598.1
Unique Nameprot_D-herbacea_F_contig1055.598.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length88
Homology
BLAST of mRNA_D-herbacea_F_contig1055.598.1 vs. uniprot
Match: D7G6K9_ECTSI (Chaperonin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6K9_ECTSI)

HSP 1 Score: 141 bits (356), Expect = 7.020e-40
Identity = 68/75 (90.67%), Postives = 71/75 (94.67%), Query Frame = 0
Query:    1 LQPVSNYILVKMFPAISRTAGGIVLPDEAQDVPCEGSVVAAGPGRTHPLTGTLIPMCVSEGDTVLFSRFSGRKVR 75
            LQPV NYILVKMF A+SRTAGGIVLPDEAQDVPCEG VVA GPGRTHPLTGTLIPMCVSEGDTVLFSR+SGRKV+
Sbjct:   77 LQPVGNYILVKMFAAVSRTAGGIVLPDEAQDVPCEGLVVAHGPGRTHPLTGTLIPMCVSEGDTVLFSRWSGRKVK 151          
BLAST of mRNA_D-herbacea_F_contig1055.598.1 vs. uniprot
Match: A0A835YHA6_9STRA (Chaperonin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHA6_9STRA)

HSP 1 Score: 100 bits (248), Expect = 6.860e-24
Identity = 46/79 (58.23%), Postives = 61/79 (77.22%), Query Frame = 0
Query:    1 LQPVSNYILVKMFPAISRTAGGIVLPDEAQDVPCEGSVVAAGPGRTHPLTGTLIPMCVSEGDTVLFSRFSGRKVREENI 79
            LQPVSN+ILVK+  + S T GGIVLPD++ D P EG VVA GPGR+HP T  LIPMCV+ G  V++S++SG+KV+ + +
Sbjct:   65 LQPVSNFILVKIRDSASLTTGGIVLPDQSIDKPSEGEVVATGPGRSHPHTAELIPMCVAPGQRVMYSKYSGKKVKYDGL 143          
BLAST of mRNA_D-herbacea_F_contig1055.598.1 vs. uniprot
Match: F0Y075_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y075_AURAN)

HSP 1 Score: 92.0 bits (227), Expect = 1.530e-22
Identity = 44/85 (51.76%), Postives = 63/85 (74.12%), Query Frame = 0
Query:    1 LQPVSNYILVKMFPAISRTAGGIVLPDEAQDVPCEGSVVAAGPGRTHPLTGTLIPMCVSEGDTVLFSRFSGRKVR---EENIVVK 82
            L PV NY LVK+      T GG++LPD+A++ P EGSVVAAGPGR+HP TGTLI M V+EG++VL+ +F G  V+   E++++++
Sbjct:    2 LSPVGNYALVKITEGKDATKGGVLLPDQAKEKPSEGSVVAAGPGRSHPDTGTLIAMPVAEGESVLYGKFDGTPVKYCGEDHMLIR 86          
BLAST of mRNA_D-herbacea_F_contig1055.598.1 vs. uniprot
Match: A0A7R9UAA2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAA2_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 2.500e-18
Identity = 38/85 (44.71%), Postives = 62/85 (72.94%), Query Frame = 0
Query:    1 LQPVSNYILVKMFPAISRTAGGIVLPDEAQDVPCEGSVVAAGPGRTHPLTGTLIPMCVSEGDTVLFSRFSGRKVR---EENIVVK 82
            LQPVSN++LVK+  A+++TAGGI++P+ A+  P +G  VA GPGR HP TG L+P+ V  G+ V++  + G K++   E++++V+
Sbjct:   42 LQPVSNFVLVKLRDAMAQTAGGIIMPETAKKRPNDGLAVAVGPGRYHPETGKLMPVSVKAGERVMYGEYMGTKIKYNEEDHVLVR 126          
BLAST of mRNA_D-herbacea_F_contig1055.598.1 vs. uniprot
Match: A0A8J2WID0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WID0_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 2.680e-18
Identity = 39/75 (52.00%), Postives = 53/75 (70.67%), Query Frame = 0
Query:    1 LQPVSNYILVKMFPAISRTAGGIVLPDEAQDVPCEGSVVAAGPGRTHPLTGTLIPMCVSEGDTVLFSRFSGRKVR 75
            L+PV+NYILVK+   I  T GG+ LPD+A++ P  G VVAAG G+ HP TG ++P  V+EGD VL+ +F G  V+
Sbjct:   42 LEPVANYILVKIDDGIDATKGGVFLPDQAKEKPSAGIVVAAGAGKAHPDTGVVVPNPVTEGDRVLYGKFDGTSVK 116          
BLAST of mRNA_D-herbacea_F_contig1055.598.1 vs. uniprot
Match: A0A2M7I0G4_9BACT (Co-chaperonin GroES n=1 Tax=Ignavibacteriales bacterium CG12_big_fil_rev_8_21_14_0_65_30_8 TaxID=1974046 RepID=A0A2M7I0G4_9BACT)

HSP 1 Score: 77.0 bits (188), Expect = 1.560e-16
Identity = 36/77 (46.75%), Postives = 55/77 (71.43%), Query Frame = 0
Query:    1 LQPVSNYILVKMFPAISRTAGGIVLPDEAQDVPCEGSVVAAGPGRTHPLTGTLIPMCVSEGDTVLFSRFSGRKVREE 77
            L+P+++ ++VK   A  +T GGI+LPD A++ P EG++VAAGPGRT    G ++PM V +GD VL+ ++SG +V  E
Sbjct:    6 LKPLADRVIVKPMEADEKTKGGIILPDTAKEKPVEGTIVAAGPGRTSD-EGKVVPMSVKKGDKVLYGKYSGSEVTVE 81          
BLAST of mRNA_D-herbacea_F_contig1055.598.1 vs. uniprot
Match: A0A2E5GEI2_9BACT (Co-chaperonin GroES n=2 Tax=root TaxID=1 RepID=A0A2E5GEI2_9BACT)

HSP 1 Score: 76.3 bits (186), Expect = 2.970e-16
Identity = 36/77 (46.75%), Postives = 56/77 (72.73%), Query Frame = 0
Query:    1 LQPVSNYILVKMFPAISRTAGGIVLPDEAQDVPCEGSVVAAGPGRTHPLTGTLIPMCVSEGDTVLFSRFSGRKVREE 77
            L+P+++ ++V+  PA  ++AGGI+LPD AQ+ P +GSVVA GPG++  + G LI M V EGD VL+ ++SG ++  E
Sbjct:    5 LKPLADRVVVEPAPAEDKSAGGIILPDTAQEKPQQGSVVAVGPGKSSDV-GNLIEMTVKEGDKVLYGKYSGSEITHE 80          
BLAST of mRNA_D-herbacea_F_contig1055.598.1 vs. uniprot
Match: A0A5D3YJD1_9BACT (Co-chaperonin GroES n=1 Tax=Fodinibius salinus TaxID=860790 RepID=A0A5D3YJD1_9BACT)

HSP 1 Score: 75.9 bits (185), Expect = 4.330e-16
Identity = 37/91 (40.66%), Postives = 62/91 (68.13%), Query Frame = 0
Query:    1 LQPVSNYILVKMFPAISRTAGGIVLPDEAQDVPCEGSVVAAGPGRTHPLTGTLIPMCVSEGDTVLFSRFSGRKVR---EENIVVKTLSLIG 88
            ++P+S+ +LV+  PA  +T  GI++PD A++ P EG+VV+AGPG+     G  I M VSEGDTVL+ ++SG ++    EE ++++   ++G
Sbjct:    6 IKPLSDRVLVQPEPADDKTESGIIIPDSAKEKPQEGTVVSAGPGKVE--NGNKIDMSVSEGDTVLYGKYSGTEITLDGEEYLIMRESDILG 94          
BLAST of mRNA_D-herbacea_F_contig1055.598.1 vs. uniprot
Match: A0A6N2DQZ4_9ACTN (Co-chaperonin GroES n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DQZ4_9ACTN)

HSP 1 Score: 75.5 bits (184), Expect = 6.140e-16
Identity = 36/74 (48.65%), Postives = 53/74 (71.62%), Query Frame = 0
Query:    1 LQPVSNYILVKMFPAISRTAGGIVLPDEAQDVPCEGSVVAAGPGRTHPLTGTLIPMCVSEGDTVLFSRFSGRKV 74
            L+P+ + I+VK   A  RTA G+V+PD A++ P +GSV+A GPG+    +G LIPM VS GDTVL+S++ G ++
Sbjct:    3 LKPLDDRIVVKPNEAEERTASGLVIPDTAKEKPQQGSVLAVGPGKRSDQSGELIPMDVSVGDTVLYSKYGGTEI 76          
BLAST of mRNA_D-herbacea_F_contig1055.598.1 vs. uniprot
Match: F8ETZ1_ZYMMT (Co-chaperonin GroES n=1 Tax=Zymomonas mobilis subsp. pomaceae (strain ATCC 29192 / DSM 22645 / JCM 10191 / CCUG 17912 / NBRC 13757 / NCIMB 11200 / NRRL B-4491 / Barker I) TaxID=579138 RepID=F8ETZ1_ZYMMT)

HSP 1 Score: 75.1 bits (183), Expect = 8.260e-16
Identity = 38/90 (42.22%), Postives = 60/90 (66.67%), Query Frame = 0
Query:    2 QPVSNYILVKMFPAISRTAGGIVLPDEAQDVPCEGSVVAAGPGRTHPLTGTLIPMCVSEGDTVLFSRFSGRKVR---EENIVVKTLSLIG 88
            +P+ + +LV+   A  +TAGGI++PD AQ+ P EG V+AAG G TH   G L+P+ V  GD +LF ++SG +VR   E+ +++K   ++G
Sbjct:    4 RPLHDRVLVRRVKAEEKTAGGIIIPDTAQEKPQEGEVIAAGTG-THSEEGKLLPLDVKPGDRILFGKWSGTEVRVDGEDLLIMKESDILG 92          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1055.598.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6K9_ECTSI7.020e-4090.67Chaperonin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G... [more]
A0A835YHA6_9STRA6.860e-2458.23Chaperonin n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
F0Y075_AURAN1.530e-2251.76Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7R9UAA2_9STRA2.500e-1844.71Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A8J2WID0_9STRA2.680e-1852.00Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A2M7I0G4_9BACT1.560e-1646.75Co-chaperonin GroES n=1 Tax=Ignavibacteriales bact... [more]
A0A2E5GEI2_9BACT2.970e-1646.75Co-chaperonin GroES n=2 Tax=root TaxID=1 RepID=A0A... [more]
A0A5D3YJD1_9BACT4.330e-1640.66Co-chaperonin GroES n=1 Tax=Fodinibius salinus Tax... [more]
A0A6N2DQZ4_9ACTN6.140e-1648.65Co-chaperonin GroES n=1 Tax=Ilumatobacter sp. TaxI... [more]
F8ETZ1_ZYMMT8.260e-1642.22Co-chaperonin GroES n=1 Tax=Zymomonas mobilis subs... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020818GroES chaperonin familyPRINTSPR00297CHAPERONIN10coord: 23..44
score: 46.92
coord: 1..11
score: 20.12
coord: 59..71
score: 45.35
IPR020818GroES chaperonin familySMARTSM00883Cpn10_2coord: 1..83
e-value: 2.3E-10
score: 50.4
IPR020818GroES chaperonin familyPFAMPF00166Cpn10coord: 2..77
e-value: 4.5E-18
score: 65.1
IPR020818GroES chaperonin familyPANTHERPTHR1077210 KDA HEAT SHOCK PROTEINcoord: 1..78
IPR037124GroES chaperonin superfamilyGENE3D2.30.33.40coord: 1..88
e-value: 2.2E-21
score: 77.6
NoneNo IPR availablePANTHERPTHR10772:SF2410 KDA CHAPERONINcoord: 1..78
IPR011032GroES-like superfamilySUPERFAMILY50129GroES-likecoord: 1..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1055contigD-herbacea_F_contig1055:8980..9830 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1055.598.1mRNA_D-herbacea_F_contig1055.598.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig1055 8980..9830 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig1055.598.1 ID=prot_D-herbacea_F_contig1055.598.1|Name=mRNA_D-herbacea_F_contig1055.598.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=88bp
LQPVSNYILVKMFPAISRTAGGIVLPDEAQDVPCEGSVVAAGPGRTHPLT
GTLIPMCVSEGDTVLFSRFSGRKVREENIVVKTLSLIG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011032GroES-like_sf
IPR037124Chaperonin_GroES_sf
IPR020818Chaperonin_GroES