prot_D-herbacea_F_contig105.561.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig105.561.1
Unique Nameprot_D-herbacea_F_contig105.561.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length202
Homology
BLAST of mRNA_D-herbacea_F_contig105.561.1 vs. uniprot
Match: A0A6H5L805_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L805_9PHAE)

HSP 1 Score: 355 bits (912), Expect = 8.740e-116
Identity = 169/203 (83.25%), Postives = 182/203 (89.66%), Query Frame = 0
Query:    1 SSRRRGTRHYGSAGSEHG-----RMNFFTEGDLDELLHSTFFIKMCDDASWLYVEEHPFQPELSWLLSLWGGYKIAPRFPGEVKQNEAHRMLFQCESGRHKGQVRIRSRATNTFLYFLGVKQPLTWVAWDRDVVGGDWEDLKLEWVGKPAGPDGVLVGDERGRVVFHSRPMNAYVSWNGTRFTHVPGREGASVFMLQRMAPSS 198
            S+RRR +R  G+A  E G     +MNFFTE DLDELLHSTFFIKMCDDASWLYVE+HPFQPEL+WLLSLWGGYKIAPRF GEVKQNEAHRMLFQ E+GRH+  VRIRSRATNTFL+FLG+KQPLTWVAWDRDVVGG+WEDLKLEWVGKP GPDGVLVGDERGRVV  SRPM  YVSWNG+RFTHVPGREGA+VFMLQRMAPSS
Sbjct:  534 STRRRTSRQGGAARGEGGEGSEQKMNFFTEKDLDELLHSTFFIKMCDDASWLYVEDHPFQPELNWLLSLWGGYKIAPRFQGEVKQNEAHRMLFQAENGRHRDHVRIRSRATNTFLFFLGIKQPLTWVAWDRDVVGGEWEDLKLEWVGKPQGPDGVLVGDERGRVVIRSRPMKGYVSWNGSRFTHVPGREGATVFMLQRMAPSS 736          
BLAST of mRNA_D-herbacea_F_contig105.561.1 vs. uniprot
Match: D8LSC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC8_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 3.650e-63
Identity = 102/127 (80.31%), Postives = 112/127 (88.19%), Query Frame = 0
Query:    1 SSRRRGTRHYGSAGSEHG-----RMNFFTEGDLDELLHSTFFIKMCDDASWLYVEEHPFQPELSWLLSLWGGYKIAPRFPGEVKQNEAHRMLFQCESGRHKGQVRIRSRATNTFLYFLGVKQPLTWV 122
            S+RRR +R  G+A  E G     +MNFFTE DLDELLHSTFFIKMCDDASWLYVE+HPFQPEL+WLLSLWGGYKIAPRF GEVKQNEAHRMLFQ E+GRH+G VRIRSRATNTFL+FLG+KQPLTWV
Sbjct:  333 STRRRTSRQGGAARGEGGEGSEQKMNFFTEKDLDELLHSTFFIKMCDDASWLYVEDHPFQPELNWLLSLWGGYKIAPRFQGEVKQNEAHRMLFQAENGRHRGHVRIRSRATNTFLFFLGIKQPLTWV 459          
BLAST of mRNA_D-herbacea_F_contig105.561.1 vs. uniprot
Match: A0A835ZHV2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHV2_9STRA)

HSP 1 Score: 162 bits (409), Expect = 8.990e-44
Identity = 87/200 (43.50%), Postives = 118/200 (59.00%), Query Frame = 0
Query:    3 RRRGTRHYG-SAGSEHGRMNF----FTEGDLDELLHSTFFIKMCDDASWLYVEEHPFQPE----LSWLLSLWG-GYKIAPRFPGEVKQNEAHRMLFQCESGRHKGQVRIRSRATNTFLYFLGVKQPLTWVAWDRDVVGGDWEDLKLEWVGKPAGPDGVLVGDERGRVVFHSRPMNAYVSWNGTRFTHVPGREGASVFMLQ 192
            RRR  RH G   G   G ++     FT     EL+ S FF+++ DD SW+YVE   +QP+    L W ++L+  GYK+  R+ G+V  ++A+RMLFQCE GR  G V +RSR TNT L+ LG+++P T VAWDR+V GGDWED+++EW             +  G VV   +    Y+ W G RF HV  R+ AS FMLQ
Sbjct:  322 RRRRRRHGGIERGRSEGGLDLQPYLFTRATAHELMDSLFFMRVVDDDSWVYVEHDLYQPQEGAGLGWAMNLFHRGYKVGVRYAGDVDPHDANRMLFQCEPGRASGHVWLRSRGTNTLLFMLGLRKPRTLVAWDREVPGGDWEDMRIEWC-----------PEHNGHVVISCKRAGGYLQWTGDRFGHVDERDCASRFMLQ 510          
BLAST of mRNA_D-herbacea_F_contig105.561.1 vs. uniprot
Match: A0A835YVS8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVS8_9STRA)

HSP 1 Score: 162 bits (409), Expect = 2.960e-43
Identity = 77/182 (42.31%), Postives = 115/182 (63.19%), Query Frame = 0
Query:   19 RMNFFTEGDLDELLHSTFFIKMCDD-ASWLYVEEHPFQPE----LSWLLSLWG-GYKIAPRFPGEVKQNEAHRMLFQCESGRHKGQVRIRSRATNTFLYFLGVKQPLTWVAWDRDVVGGDWEDLKLEWVGKPAGPDGVLVGDERGRVVFHSRPMNAYVSWNGTRFTHVPGREGASVFMLQRM 194
            R   FT     ELL S FFIK+ D+  +W++VE+   +      L W +SL+  GY++  R+ G+V  ++AHR++FQCE GR  G VRIRSR +NT+L+ LG+++PLT VAWDR+V GGDWED+++ W+ +          ++ GRV+   +    Y+ W GT+F H P ++ AS FMLQ +
Sbjct:  428 RPRHFTAETAHELLDSMFFIKLVDEEGAWMFVEDDLHESREGGGLGWAMSLFHRGYRVGARYAGDVGPHDAHRLVFQCEPGRAAGHVRIRSRGSNTYLFMLGLRRPLTLVAWDREVAGGDWEDMRIVWLPR---------AEDEGRVLIRCKTAGGYLQWTGTKFVHTPVKDSASRFMLQSL 600          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig105.561.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L805_9PHAE8.740e-11683.25Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LSC8_ECTSI3.650e-6380.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZHV2_9STRA8.990e-4443.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YVS8_9STRA2.960e-4342.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig105contigD-herbacea_F_contig105:804511..811108 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig105.561.1mRNA_D-herbacea_F_contig105.561.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig105 804510..811108 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig105.561.1 ID=prot_D-herbacea_F_contig105.561.1|Name=mRNA_D-herbacea_F_contig105.561.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=202bp
SSRRRGTRHYGSAGSEHGRMNFFTEGDLDELLHSTFFIKMCDDASWLYVE
EHPFQPELSWLLSLWGGYKIAPRFPGEVKQNEAHRMLFQCESGRHKGQVR
IRSRATNTFLYFLGVKQPLTWVAWDRDVVGGDWEDLKLEWVGKPAGPDGV
LVGDERGRVVFHSRPMNAYVSWNGTRFTHVPGREGASVFMLQRMAPSSSK
SR
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