prot_D-herbacea_F_contig105.544.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig105.544.1
Unique Nameprot_D-herbacea_F_contig105.544.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length516
Homology
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BLAST of mRNA_D-herbacea_F_contig105.544.1 vs. uniprot
Match: D7FZT4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZT4_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 3.930e-48
Identity = 115/189 (60.85%), Postives = 136/189 (71.96%), Query Frame = 0 
Query:  331 AEKLGCSTITTEVVVPSSELNFQSSQGQWRYLEADSAQLDGDDAVEVTKGVKFSTSLDDEGGGEAEASVRILELSDKYAEADFRVRAAETMVKSLQPAPS---GPSSRKKSTGGTGGRKSAMKK-KGGTRAIKSYSGKGKSAAGVVSAAFGKACGKAKQAGVFAWGARNLVFFVSAVAVIHLHGDYLAV 515
            A  LGCST TTEVVVPSSEL+F+ SQGQWRYLEADS  + GD AVEVTKG++FSTSL  +     E   RI+ELS+K ++A+ RVRAAE M+K LQP+ +               G RKSA+KK KGGTRA+KS + K + AAG +SAA G A GKAK AG  AWGARNLVFF +AVA +HLHGDYLAV
Sbjct:  289 AAALGCSTGTTEVVVPSSELDFKLSQGQWRYLEADSTPVHGDGAVEVTKGIRFSTSL--KAVDSREDDDRIVELSEKLSDAERRVRAAEAMIKKLQPSSATAXXXXXXXXXXXXAGVRKSALKKSKGGTRAVKSDAAKRRGAAGALSAAVGNAYGKAKTAGALAWGARNLVFFAAAVAAMHLHGDYLAV 475
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig105.544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZT4_ECTSI3.930e-4860.85Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 8..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig105contigD-herbacea_F_contig105:454245..468008 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig105.544.1mRNA_D-herbacea_F_contig105.544.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig105 454219..468060 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig105.544.1 ID=prot_D-herbacea_F_contig105.544.1|Name=mRNA_D-herbacea_F_contig105.544.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=516bp
MSQSGANLASARRELAERRDEAAQCMAELKAAQDIMASKGSSPKVLTVTV
QEIFGAIAVDRVAVRPDMAPAQEKVMAEGIPCKFALAAGVDKFDLVLMAE
HSPASPETTPEHERASAADSSSGAATGTIPPVAASDADAAAVVAAAEGDA
VAAAAMAAMAEVQEVGGVPAEAEGEAVTSPDGATETVDAEVDSDAAEPEA
ADKPEEAAAVAGEGEGASVPALGTEIETVVEEPKNVESEENATAEAAGAE
ATAEETVKGAVAAPVEADGDGALPSTAVEKSEAEAVTGEGLSTGGDGGGV
VDATVAAAVADVAVPPPVAAEIAEATTEVAAEKLGCSTITTEVVVPSSEL
NFQSSQGQWRYLEADSAQLDGDDAVEVTKGVKFSTSLDDEGGGEAEASVR
ILELSDKYAEADFRVRAAETMVKSLQPAPSGPSSRKKSTGGTGGRKSAMK
KKGGTRAIKSYSGKGKSAAGVVSAAFGKACGKAKQAGVFAWGARNLVFFV
SAVAVIHLHGDYLAV*
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