prot_D-herbacea_F_contig105.540.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig105.540.1
Unique Nameprot_D-herbacea_F_contig105.540.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length158
Homology
BLAST of mRNA_D-herbacea_F_contig105.540.1 vs. uniprot
Match: D8LSE4_ECTSI (Glutaredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSE4_ECTSI)

HSP 1 Score: 217 bits (553), Expect = 4.100e-70
Identity = 118/159 (74.21%), Postives = 134/159 (84.28%), Query Frame = 0
Query:    1 MRPVFNLFFLFGSSVGFYANPAIRSVSTAAVGSIVGSSLIRSASAVS--SQPKARFTTTSMNTVDFVENEIEGNNVVIFSKSYCPFCSRTKALFTTLGVKHTVYELDERNDGDQIQAILGAKTGQTTVPNVFVKGKHVGGNDAVQAANSSGALKDLLEG 157
            MRPV NLFFLFGSSVGFYANP +R V   AV S  GS+++R+ASA +  SQ +A+FTT SMN+VDFVE EI+ NNVV+FSKSYCPFC+RTK LF  LGV  TVYELD+ +DG+ IQAILGAKTGQTTVPNVFVKG HVGGNDAVQAANSSGALK LL+G
Sbjct:    1 MRPVLNLFFLFGSSVGFYANPMMRRV---AVSSFAGSTIVRAASATAFPSQRQAKFTT-SMNSVDFVEKEIDSNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGEAIQAILGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLLDG 155          
BLAST of mRNA_D-herbacea_F_contig105.540.1 vs. uniprot
Match: A0A835YTN8_9STRA (Glutaredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTN8_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.050e-33
Identity = 72/133 (54.14%), Postives = 87/133 (65.41%), Query Frame = 0
Query:   28 TAAVGSIVGSSLIRSAS---AVSSQPKARFTTTSMNTVDFVENEIEGNNVVIFSKSYCPFCSRTKALFTTLGVKHTVYELDERNDGDQIQAILGAKTGQTTVPNVFVKGKHVGGNDAVQAANSSGALKDLLEG 157
            TAA  +  GSS I  AS   A S+ PK       +   DFV+ +I   ++V+FSKSYCP+C++TKALF +L    TV ELD+R+DG  IQA L   TGQ TVPNVFVKG HVGGNDA Q ANS G LK L+ G
Sbjct:   32 TAATVTGQGSSFINGASMPMADSAPPKMAM----LAPADFVKQQIASQDIVVFSKSYCPYCAKTKALFQSLDAGATVIELDQRDDGGDIQAALAEITGQRTVPNVFVKGTHVGGNDATQKANSDGTLKSLMNG 160          
BLAST of mRNA_D-herbacea_F_contig105.540.1 vs. uniprot
Match: A0A7S3NI43_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NI43_9STRA)

HSP 1 Score: 120 bits (301), Expect = 4.070e-32
Identity = 55/91 (60.44%), Postives = 75/91 (82.42%), Query Frame = 0
Query:   65 VENEIEGNNVVIFSKSYCPFCSRTKALFTTLGVKHTVYELDERNDGDQIQAILGAKTGQTTVPNVFVKGKHVGGNDAVQAANSSGALKDLL 155
            +++ I+ N+VVIFSKSYCPFC++TKALF +L V   +YELD+R+DG +IQ+ L  KTGQ+TVPNVF+KG+H+GGND  Q A++SG L +LL
Sbjct:   43 IDDTIKANDVVIFSKSYCPFCAKTKALFQSLNVDADIYELDQRDDGAEIQSKLKEKTGQSTVPNVFIKGEHLGGNDDTQRAHASGKLAELL 133          
BLAST of mRNA_D-herbacea_F_contig105.540.1 vs. uniprot
Match: A0A7S4TBW2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4TBW2_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.490e-31
Identity = 58/101 (57.43%), Postives = 71/101 (70.30%), Query Frame = 0
Query:   55 TTTSMNTVDFVENEIEGNNVVIFSKSYCPFCSRTKALFTTLGVKHTVYELDERNDGDQIQAILGAKTGQTTVPNVFVKGKHVGGNDAVQAANSSGALKDLL 155
            T T  +  +FV+ EI  NNVV+FSKSYCP+C+ TK L + +  K  ++ELDE NDGDQIQ  L   TGQ TVPNVFVKGKH+GGND   AA  SG L ++L
Sbjct:   65 TRTMASPAEFVKTEITNNNVVVFSKSYCPYCTSTKRLLSEMNAKPKIFELDEMNDGDQIQRTLHELTGQRTVPNVFVKGKHLGGNDDTHAAARSGRLNEML 165          
BLAST of mRNA_D-herbacea_F_contig105.540.1 vs. uniprot
Match: A0A7S1CWF6_9CHLO (Hypothetical protein n=1 Tax=Picochlorum oklahomense TaxID=249345 RepID=A0A7S1CWF6_9CHLO)

HSP 1 Score: 119 bits (297), Expect = 2.070e-31
Identity = 54/92 (58.70%), Postives = 72/92 (78.26%), Query Frame = 0
Query:   65 VENEIEGNNVVIFSKSYCPFCSRTKALFTTLGVKHTVYELDERNDGDQIQAILGAKTGQTTVPNVFVKGKHVGGNDAVQAANSSGALKDLLE 156
            V++ I+  +VV+FSKS+CPFC++TK LF  LGV   +YELD+R+DG +IQA L   TGQ+TVPNVF+KG+H+GGND  Q AN+SG L  +LE
Sbjct:   50 VDDAIKAKDVVVFSKSFCPFCAKTKTLFRELGVDADIYELDQRDDGSEIQATLKEMTGQSTVPNVFIKGEHLGGNDDTQQANASGELAKMLE 141          
BLAST of mRNA_D-herbacea_F_contig105.540.1 vs. uniprot
Match: A0A1Z5KQE3_FISSO (Glutaredoxin 3 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQE3_FISSO)

HSP 1 Score: 119 bits (297), Expect = 2.460e-31
Identity = 65/136 (47.79%), Postives = 86/136 (63.24%), Query Frame = 0
Query:   22 AIRSVSTAAVGSIVGSSLIRSASAVSSQPKARFTTTS--MNTVDFVENEIEGNNVVIFSKSYCPFCSRTKALFTTLGVKHTVYELDERNDGDQIQAILGAKTGQTTVPNVFVKGKHVGGNDAVQAANSSGALKDLL 155
            A  + ST A    + S  + +A+A+ +QP + + T     +  DF+ +EI  N V IFSKSYCPFCS+TKA F  LGV   ++EL++ +DG  IQ  L   TGQ TVPNVFV GKH+GGND  Q A +SG +K LL
Sbjct:   11 AFAATSTKAFAPSIKSRPLAAANAIVTQPSSNYLTVRHMASKTDFITSEINSNQVTIFSKSYCPFCSKTKASFAELGVDAKIFELNQMDDGADIQDTLFEMTGQKTVPNVFVNGKHIGGNDDTQKAIASGEMKKLL 146          
BLAST of mRNA_D-herbacea_F_contig105.540.1 vs. uniprot
Match: A0A1X2GSF3_9FUNG (Glutaredoxin n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GSF3_9FUNG)

HSP 1 Score: 117 bits (292), Expect = 4.370e-31
Identity = 58/92 (63.04%), Postives = 66/92 (71.74%), Query Frame = 0
Query:   65 VENEIEGNNVVIFSKSYCPFCSRTKALFTTLGVKHTVYELDERNDGDQIQAILGAKTGQTTVPNVFVKGKHVGGNDAVQAANSSGALKDLLE 156
            VE  I  N +VIFSK+YCP+C+ TK LF  LG   T+ ELD RNDG  IQ  L  KTGQ TVPNVFVK +H+GGND VQAAN +G LK LLE
Sbjct:   16 VEELIANNKIVIFSKTYCPYCTSTKTLFKKLGQDATIIELDTRNDGSAIQNYLLTKTGQRTVPNVFVKQQHIGGNDNVQAANGNGTLKKLLE 107          
BLAST of mRNA_D-herbacea_F_contig105.540.1 vs. uniprot
Match: A0A1Z5KSJ8_FISSO (Glutaredoxin 3 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KSJ8_FISSO)

HSP 1 Score: 113 bits (283), Expect = 7.980e-30
Identity = 53/93 (56.99%), Postives = 70/93 (75.27%), Query Frame = 0
Query:   63 DFVENEIEGNNVVIFSKSYCPFCSRTKALFTTLGVKHTVYELDERNDGDQIQAILGAKTGQTTVPNVFVKGKHVGGNDAVQAANSSGALKDLL 155
            DF++ E + + VV++SKSYCP+C+ TK LF  L V H V+ELD+ ++G+ IQA L   TGQ TVPNVF+KGKH+GGND  QAA+ SG L+ LL
Sbjct:    6 DFIQKEHDASPVVVWSKSYCPYCTATKNLFQKLNVPHKVHELDQMSNGNDIQAALQQMTGQRTVPNVFIKGKHLGGNDDTQAAHRSGHLQQLL 98          
BLAST of mRNA_D-herbacea_F_contig105.540.1 vs. uniprot
Match: A0A7S2GQN2_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GQN2_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.870e-29
Identity = 54/93 (58.06%), Postives = 68/93 (73.12%), Query Frame = 0
Query:   63 DFVENEIEGNNVVIFSKSYCPFCSRTKALFTTLGVKHTVYELDERNDGDQIQAILGAKTGQTTVPNVFVKGKHVGGNDAVQAANSSGALKDLL 155
            +FV++EI  NNVV+FSKSYCPFC+ TK +  ++     V+ELDE N+GDQIQ  L   TGQ TVPNVF+KGKH+GGND  Q A  SG L ++L
Sbjct:   72 EFVKSEIANNNVVVFSKSYCPFCTSTKRILGSMDTNPKVFELDEMNNGDQIQGALYDLTGQRTVPNVFIKGKHLGGNDDTQRAARSGKLDEML 164          
BLAST of mRNA_D-herbacea_F_contig105.540.1 vs. uniprot
Match: A0A0L0HVH8_SPIPD (Glutaredoxin n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0HVH8_SPIPD)

HSP 1 Score: 112 bits (281), Expect = 2.790e-29
Identity = 52/94 (55.32%), Postives = 69/94 (73.40%), Query Frame = 0
Query:   63 DFVENEIEGNNVVIFSKSYCPFCSRTKALFTTLGVKHTVYELDERNDGDQIQAILGAKTGQTTVPNVFVKGKHVGGNDAVQAANSSGALKDLLE 156
            + VE  I+ N VV+FSKSYCP+C + K L  +LGVK+ ++ELDER DG  IQ  L  KTGQ TVPN+F+KG+H+GG D + AA+ SG L+ LL+
Sbjct:   25 ELVEKAIKENKVVVFSKSYCPYCKKAKNLLDSLGVKYELFELDERPDGQAIQEYLKEKTGQRTVPNIFIKGQHIGGCDDLHAAHDSGKLQKLLD 118          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig105.540.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSE4_ECTSI4.100e-7074.21Glutaredoxin n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A835YTN8_9STRA1.050e-3354.14Glutaredoxin n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S3NI43_9STRA4.070e-3260.44Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S4TBW2_9STRA1.490e-3157.43Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1CWF6_9CHLO2.070e-3158.70Hypothetical protein n=1 Tax=Picochlorum oklahomen... [more]
A0A1Z5KQE3_FISSO2.460e-3147.79Glutaredoxin 3 n=1 Tax=Fistulifera solaris TaxID=1... [more]
A0A1X2GSF3_9FUNG4.370e-3163.04Glutaredoxin n=1 Tax=Hesseltinella vesiculosa TaxI... [more]
A0A1Z5KSJ8_FISSO7.980e-3056.99Glutaredoxin 3 n=2 Tax=Fistulifera solaris TaxID=1... [more]
A0A7S2GQN2_9STRA1.870e-2958.06Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A0L0HVH8_SPIPD2.790e-2955.32Glutaredoxin n=1 Tax=Spizellomyces punctatus (stra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014025Glutaredoxin subgroupPRINTSPR00160GLUTAREDOXINcoord: 133..146
score: 33.93
coord: 74..92
score: 48.46
coord: 119..132
score: 49.4
NoneNo IPR availableGENE3D3.40.30.10coord: 51..157
e-value: 1.7E-35
score: 123.1
NoneNo IPR availablePANTHERPTHR45694:SF5GLUTAREDOXIN 2coord: 63..156
NoneNo IPR availablePANTHERPTHR45694FAMILY NOT NAMEDcoord: 63..156
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..157
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..29
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.539
IPR002109GlutaredoxinPFAMPF00462Glutaredoxincoord: 74..136
e-value: 4.5E-19
score: 68.4
IPR002109GlutaredoxinPROSITEPS51354GLUTAREDOXIN_2coord: 62..157
score: 22.322
IPR011899Glutaredoxin, eukaryotic/virialTIGRFAMTIGR02180TIGR02180coord: 74..154
e-value: 4.1E-29
score: 98.6
IPR011767Glutaredoxin active sitePROSITEPS00195GLUTAREDOXIN_1coord: 76..91
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 62..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig105contigD-herbacea_F_contig105:365115..370324 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig105.540.1mRNA_D-herbacea_F_contig105.540.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig105 364835..370390 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig105.540.1 ID=prot_D-herbacea_F_contig105.540.1|Name=mRNA_D-herbacea_F_contig105.540.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=158bp
MRPVFNLFFLFGSSVGFYANPAIRSVSTAAVGSIVGSSLIRSASAVSSQP
KARFTTTSMNTVDFVENEIEGNNVVIFSKSYCPFCSRTKALFTTLGVKHT
VYELDERNDGDQIQAILGAKTGQTTVPNVFVKGKHVGGNDAVQAANSSGA
LKDLLEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR011767GLR_AS
IPR011899Glutaredoxin_euk/vir
IPR002109Glutaredoxin
IPR014025Glutaredoxin_subgr