prot_D-herbacea_F_contig103.387.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig103.387.1
Unique Nameprot_D-herbacea_F_contig103.387.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length327
Homology
BLAST of mRNA_D-herbacea_F_contig103.387.1 vs. uniprot
Match: D7G262_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G262_ECTSI)

HSP 1 Score: 299 bits (765), Expect = 1.150e-96
Identity = 159/243 (65.43%), Postives = 185/243 (76.13%), Query Frame = 0
Query:    1 MKTF-YAGALGLLAVSSVAWADCDQFKS-LPVPLTGDTTLELISANVDCPILADNDLEEFVIQGGTLTLTGSSTTKFTNLRFTVKDGAKLIFDFAMTEFGPNVGYEQEDDYGGFMVQVESGGKVEFTGETYATNLENMRSVFYNE--GSIKFGSNAVFHDCDSNVFRDNLGSLRFFGDVTFTENRYLAISNDGGTVRIKGDALFVTNGRSFEGHNGGAFANYNGGTSIFRGTATFSDNRCDES 239
            M++F +  ALGL A SSV  A CD  ++ L  PLTGDTTLEL S + DCPIL DN+LEEF ++GGTLTLTG STTKFTNL+FT+ D A LIFD+  TEFGPN+GYEQED +GG+MVQV SGG VEF GE  AT L NMRSVFYNE  G+I+F  NAVF D  +NVFR NLG LRF+GD TFT N YLAI N+GG+VRI      V NGRSF+GH+GG F+N +GGT+IFRG A FS N CDES
Sbjct:    1 MRSFLFISALGLWATSSVR-ASCDDLRTALSSPLTGDTTLEL-SGDADCPILEDNELEEFTVEGGTLTLTGPSTTKFTNLKFTIMDQAGLIFDYDTTEFGPNLGYEQEDSFGGYMVQVLSGGSVEFLGEMAATGLANMRSVFYNEAGGNIEFADNAVFDDIGTNVFRSNLGRLRFYGDATFTNNIYLAIDNEGGSVRIXXXXXXVENGRSFDGHSGGGFSNTDGGTAIFRGPALFSSNACDES 241          
BLAST of mRNA_D-herbacea_F_contig103.387.1 vs. uniprot
Match: A0A6H5JB77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB77_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 3.680e-33
Identity = 74/128 (57.81%), Postives = 84/128 (65.62%), Query Frame = 0
Query:  113 MVQVESGGKVEFTGETYATNLENMRSVFYNE--GSIKFGSNAVFHDCDSNVFRDNLGSLRFFGDVTFTENRYLAISNDGGTVRIKGDALFVTNGRSFEGHNGGAFANYNGGTSIFRGTATFSDNRCDE 238
            MVQV +GG VEF GE  AT L NMRSVFYNE  GSI+                     LRF+GD TFT N YLAI NDGG+VRI G+A FV NGRSF+GH+GG F+N +GG +IFRG A FS N CDE
Sbjct:    1 MVQVLTGGSVEFLGEMAATGLANMRSVFYNEAGGSIE---------------------LRFYGDATFTNNIYLAIDNDGGSVRINGEATFVENGRSFDGHSGGGFSNTDGGIAIFRGPALFSSNTCDE 107          
BLAST of mRNA_D-herbacea_F_contig103.387.1 vs. uniprot
Match: D7FHY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY2_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 1.390e-29
Identity = 108/306 (35.29%), Postives = 149/306 (48.69%), Query Frame = 0
Query:    8 ALGLLAVSSVAWADCDQFKSLPVPLTGDTTLELISA-NVDCPILADNDLEEF----VIQGGTLTLTGS-STTKFTNLRFTVKDGAKLIFDFAMTEFGPNVGYEQEDDYGGFMVQVESGGKVEFTGETYATNLENMRSVFYNEGSIKFGSNAVFHDCDSNVFRDNLGSLRFFGDVTFTENRYLAISNDG--GTVRIKGDALFVTNGRSFEGHNGGAFANYNGGTSIFRGTATFSDNRCDESGGGVYNGPDSKMXXXXXXXXXXXXXXXXXXXGLDN-------MGGVVKFKAAVRVSGNEAASSGGV 298
            AL L+A S+V   +CD   +    ++  T ++L +   VDCP  +++D EE     +  G TLT+    S  +F NLRF V++GA LIFD  +T  GPN G  Q +  G F+  V  GG + F G+  A+ + N+RSVFYN GSI+F  +++F++ + NVFR N                     NDG    VR    A F+ N   F+G  G A  N  GGT+IFR  A FSD+ CDE G  V N    KM                   G+ N         G + FKAAV+ + N A   GG+
Sbjct:   13 ALALMA-STVRSQECDDIDAYFGDVSSVTEIDLGTIIRVDCP--SNDDAEELPYITIESGKTLTVKSEESFVRFVNLRFIVEEGASLIFDMPVTRVGPNSG--QSEGAGDFVFDVAEGGSLTFNGKFRASQVSNVRSVFYNRGSIEFKDDSLFNN-NGNVFRSNXXXXXXXXXXXXXXXXXXXXXNDGEDSFVRFSKTATFIDNAGFFDGAWGCAIDN--GGTAIFRDDAVFSDHDCDE-GAAVSN--TGKMRFYGKAYFSDNRNYRDTGGGVLNRAVYDSDQAGDLVFKAAVQFNRNTAEYGGGI 307          
BLAST of mRNA_D-herbacea_F_contig103.387.1 vs. uniprot
Match: A0A6H5J6U2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6U2_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 5.120e-29
Identity = 59/85 (69.41%), Postives = 68/85 (80.00%), Query Frame = 0
Query:   20 ADCDQFKS-LPVPLTGDTTLELISANVDCPILADNDLEEFVIQGGTLTLTGSSTTKFTNLRFTVKDGAKLIFDFAMTEFGPNVGY 103
            A CD  +S L  PLTGDTTLEL S + DCPIL DN+LEEF ++GGTLTLTG STTKFTNL+FT+ D A LIFD+  TEFGPN+GY
Sbjct:    6 ASCDDLRSALSSPLTGDTTLEL-SGDADCPILEDNELEEFTVEGGTLTLTGPSTTKFTNLKFTIMDQAGLIFDYDTTEFGPNLGY 89          
BLAST of mRNA_D-herbacea_F_contig103.387.1 vs. uniprot
Match: A0A6H5KB90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB90_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 2.410e-19
Identity = 70/188 (37.23%), Postives = 101/188 (53.72%), Query Frame = 0
Query:    8 ALGLLAVSSVAWADCDQFKSLPVPLTGDTTLELISA-NVDCPILADND-LEEFVIQGG-TLTLTGS-STTKFTNLRFTVKDGAKLIFDFAMTEFGPN--VGYEQEDDYGGFMVQVESGGKVEFTGETYATNLENMRSVFYNEGSIKFGSNAVFHDCDSNVFRDNLGSLRFFGDVTFTENRYLAISNDG 189
            AL L+A S+V   +CD   +    ++  T ++L +   VDCP   D + L    I+ G TL +    S  +F NLRF V++GA LIFD  +T  GPN  V  E   D   F+  V  GG + F G+  ++ + N+RSVFYN GSI+F  +++F++ + NVFR+N                YLAI NDG
Sbjct:   13 ALALIA-STVRSQECDDIDAYFGDVSSVTEIDLGTIIRVDCPSTDDGEELPYITIESGKTLAVKSEESFVRFVNLRFIVEEGASLIFDMPVTRVGPNSVVDPESASD---FVFDVAEGGSLTFNGKFRSSQVFNVRSVFYNRGSIEFKDDSLFNN-NGNVFRNNEXXXXXXXXXXXXXXXYLAIVNDG 195          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig103.387.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G262_ECTSI1.150e-9665.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JB77_9PHAE3.680e-3357.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHY2_ECTSI1.390e-2935.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J6U2_9PHAE5.120e-2969.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KB90_9PHAE2.410e-1937.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..326
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.761

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig103contigD-herbacea_F_contig103:1733..11375 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig103.387.1mRNA_D-herbacea_F_contig103.387.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig103 1632..13108 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig103.387.1 ID=prot_D-herbacea_F_contig103.387.1|Name=mRNA_D-herbacea_F_contig103.387.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=327bp
MKTFYAGALGLLAVSSVAWADCDQFKSLPVPLTGDTTLELISANVDCPIL
ADNDLEEFVIQGGTLTLTGSSTTKFTNLRFTVKDGAKLIFDFAMTEFGPN
VGYEQEDDYGGFMVQVESGGKVEFTGETYATNLENMRSVFYNEGSIKFGS
NAVFHDCDSNVFRDNLGSLRFFGDVTFTENRYLAISNDGGTVRIKGDALF
VTNGRSFEGHNGGAFANYNGGTSIFRGTATFSDNRCDESGGGVYNGPDSK
MTFHGKVGLYDNRCLNGEGGGLDNMGGVVKFKAAVRVSGNEAASSGGVSP
PVMVERPLSTDGRQSSLTRRPKPGAR*
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