prot_D-herbacea_F_contig100.241.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig100.241.1
Unique Nameprot_D-herbacea_F_contig100.241.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length268
Homology
BLAST of mRNA_D-herbacea_F_contig100.241.1 vs. uniprot
Match: D7FHX4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHX4_ECTSI)

HSP 1 Score: 250 bits (639), Expect = 3.460e-79
Identity = 135/241 (56.02%), Postives = 159/241 (65.98%), Query Frame = 0
Query:    1 YRFSRVSREIQHLVHEIQAVQPPYHNIPNPGRNLGYIPSFSWQYMGRNMRPLMESLCWILAAMTSGLHDATFTLHPHRGWNVSPLRTRAHLAPEPATGHRGVTGHTAVE----TKPSRRGHEDAEKITLGVVMERRSNHSPHRLIQGILEGLDRSKFRVVVFARDVNPDDTYPPAGTAILEAADEVLIMPWHRLATGMPDPFLERQVVEKAKVPFGHGHPVTSGSPAIDYFVGSNLFETTA 237
            +RFSRVS E + LV  IQ    P  N+PNPGR+L +IPSFSW Y+GRNMRPLMESLCWILAAMT GLH+A   L P   W+ S    R         G RG  G         T P     +D  +IT+G VMER  N SPHRLIQG+LEG+DRS+FR+VVF++D      Y  AG A+LEAA+EV I PWH  A G+ DPF +R V+   +V FGHGHPVTSGSP IDYFV S+LFETTA
Sbjct:    2 FRFSRVSAETRRLVEHIQTSDAPLRNVPNPGRDLIHIPSFSWPYLGRNMRPLMESLCWILAAMTVGLHEAIARLQPRNAWDNSTSSGRQ--------GTRGAFGEGEQPQISLTPPPSIATKDV-RITVGFVMERWGNRSPHRLIQGVLEGMDRSRFRLVVFSQDYT--GYYCEAGKALLEAAEEVKIFPWHPFAEGLTDPFADRGVIASVQVVFGHGHPVTSGSPGIDYFVSSDLFETTA 231          
BLAST of mRNA_D-herbacea_F_contig100.241.1 vs. uniprot
Match: A0A6H5JQ47_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ47_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 8.630e-47
Identity = 102/234 (43.59%), Postives = 125/234 (53.42%), Query Frame = 0
Query:   49 MRPLMESLCWILAAMTSGLHDATFTLHPHRGWNVSPLRTRAHLAPEPATGHRGVTGHTAVETKPSRRGHEDAEKITLGVVMERRSNHSPHRLIQGILEGLDRSKFRVVVFARDVNPDDTYPPAGTAILEAADEVLIMPWHRLATGMPDPFLERQVVEKAKVP---------------------------FGHGHPVTSGSPAIDYFVGSNLFETTASIEGREIRKLAGAGSDIN 255
            MRPLMESLCWILAA+  GLH+A   L P + W  + L                      +E K  RRG     +IT+G VMER  N SPH LIQ ILE +DRS+FR+VVF+RD    D Y  AG A+ EAA+EV I PWH    G+ DPF +R V+   +V                            FGHGH VTSGSP ID FV S+L+ETTASI+ RE+ +L    +  N
Sbjct:    1 MRPLMESLCWILAALMVGLHEAIAQLQPRKAWTTASL----------------------LEDK-ERRGRV---RITVGFVMERWGNRSPHHLIQRILESVDRSRFRLVVFSRDYT--DCYCEAGQALPEAAEEVKIFPWHPFVEGLTDPFADRGVIASVQVDVLLSAALGNTLWSHLLALGRLAPVQVVFGHGHSVTSGSPGIDCFVSSDLYETTASIDARELAELPAPRATYN 206          
BLAST of mRNA_D-herbacea_F_contig100.241.1 vs. uniprot
Match: A0A024TCF2_9STRA (Glyco_transf_41 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TCF2_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 3.360e-5
Identity = 49/158 (31.01%), Postives = 75/158 (47.47%), Query Frame = 0
Query:  122 KITLGVVMERRSNHSPHRLIQGILEGLDRSKFRVVVFARD-VNPDDTYPPAGT------AILEAADEVLIMP------WHRLATGMPDPFLERQVVEKAKVPF-GH-----------GHPVTSGSPAIDYFVGSNLF--ETTASIEGREIRKLAGAGS 252
            KI +G V      HS  +LIQ ++E +DR++F VVV A     P DT   + T      AI EAAD  +++P       H +     D  +  ++   A + F  H           GHP+T+G P+IDYF+ S  F  +   S +GR + ++ G  +
Sbjct:  543 KIKVGFVSSWFRVHSVGKLIQRVIETIDRNQFHVVVLAATHFFPHDTVATSTTTDAITRAIQEAADAFVVLPASQDMAMHMILQEALDVLVYPEIGMDAWMYFLAHRRLAPIQCMFWGHPITTGLPSIDYFIASEFFFADFFESNDGRRMDEMHGGAT 700          
BLAST of mRNA_D-herbacea_F_contig100.241.1 vs. uniprot
Match: A0A024TB82_9STRA (Glyco_transf_41 domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TB82_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 3.560e-5
Identity = 49/158 (31.01%), Postives = 75/158 (47.47%), Query Frame = 0
Query:  122 KITLGVVMERRSNHSPHRLIQGILEGLDRSKFRVVVFARD-VNPDDTYPPAGT------AILEAADEVLIMP------WHRLATGMPDPFLERQVVEKAKVPF-GH-----------GHPVTSGSPAIDYFVGSNLF--ETTASIEGREIRKLAGAGS 252
            KI +G V      HS  +LIQ ++E +DR++F VVV A     P DT   + T      AI EAAD  +++P       H +     D  +  ++   A + F  H           GHP+T+G P+IDYF+ S  F  +   S +GR + ++ G  +
Sbjct:  543 KIKVGFVSSWFRVHSVGKLIQRVIETIDRNQFHVVVLAATHFFPHDTVATSTTTDAITRAIQEAADAFVVLPASQDMAMHMILQEALDVLVYPEIGMDAWMYFLAHRRLAPIQCMFWGHPITTGLPSIDYFIASEFFFADFFESNDGRRMDEMHGGAT 700          
BLAST of mRNA_D-herbacea_F_contig100.241.1 vs. uniprot
Match: A0A7S2JV56_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JV56_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 7.390e-5
Identity = 50/176 (28.41%), Postives = 84/176 (47.73%), Query Frame = 0
Query:   76 PHRGWNVSPLRTRAHLAPEPATGHRGVTGHTA--VETKPSRRGHEDAE-KITLGVVMERRSNHSPHRLIQGILEGLDRSKFRVVVFA----RDVNPDDTYPPAGTAILEA----------ADEVLIMPWHRLATGMPDPFL-ERQVVEKAKVPFGHGHPVTSGSPAIDYFVGSNLF 233
            P++G+N +PL ++ +        ++ +  + +  +  +  R GHE    KI +G   +   NHS  +L  G++ GLDR  F V++F+    +D   D+    +    +E           +  + IM +  +  GM D F+     +   +V    GHPVTSG P IDYF+ SNLF
Sbjct:  171 PYQGFNDAPLMSKINRL------YQAIFPNLSRVLPAQTEREGHEAGRRKIRVGFASQYFRNHSVCKLFCGLISGLDRDFFDVIIFSSATVKDSYTDEVSERSEFVRVEGFLSNNRHLALSKNLDIMVYPDI--GMGDSFIWAHSRLANIQVSLW-GHPVTSGMPHIDYFISSNLF 337          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig100.241.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FHX4_ECTSI3.460e-7956.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JQ47_9PHAE8.630e-4743.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A024TCF2_9STRA3.360e-531.01Glyco_transf_41 domain-containing protein n=1 Tax=... [more]
A0A024TB82_9STRA3.560e-531.01Glyco_transf_41 domain-containing protein n=2 Tax=... [more]
A0A7S2JV56_9STRA7.390e-528.41Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig100contigD-herbacea_F_contig100:696438..698330 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig100.241.1mRNA_D-herbacea_F_contig100.241.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig100 696438..698330 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig100.241.1 ID=prot_D-herbacea_F_contig100.241.1|Name=mRNA_D-herbacea_F_contig100.241.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=268bp
YRFSRVSREIQHLVHEIQAVQPPYHNIPNPGRNLGYIPSFSWQYMGRNMR
PLMESLCWILAAMTSGLHDATFTLHPHRGWNVSPLRTRAHLAPEPATGHR
GVTGHTAVETKPSRRGHEDAEKITLGVVMERRSNHSPHRLIQGILEGLDR
SKFRVVVFARDVNPDDTYPPAGTAILEAADEVLIMPWHRLATGMPDPFLE
RQVVEKAKVPFGHGHPVTSGSPAIDYFVGSNLFETTASIEGREIRKLAGA
GSDINTTVHENFTTEVTP
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