prot_D-herbacea_F_contig10.165.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig10.165.1
Unique Nameprot_D-herbacea_F_contig10.165.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length384
Homology
[Close]
BLAST of mRNA_D-herbacea_F_contig10.165.1 vs. uniprot
Match: D7FP75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP75_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 2.320e-41
Identity = 130/346 (37.57%), Postives = 173/346 (50.00%), Query Frame = 0 
Query:   76 GATTTVGTEKKDWDAVLAEAISVVEWDLSAEIPSEALREGFRRTLLKLLKNILGKHEGRRTVRDRNTVFQENVGRWACGRCLMRLAGYVMQRAPGT-------EYGVAAERGTAASGGELGYIWVAHAPRSSGHVDMLECLMGALEDQAMLGI-------MRTGSGSRAVDAQGVQSPLLTEDVDPVTEVAQ-------------ALEMGTRLGPTDE-ENDFTRIRREQDMEFQDALRRDRDAAAAAKV-APM--------ISTGDATSSNLDGPVPSVSSAPYSRDTPAANEADTVESNAGLLTIGGGSDKEGVVVVASRP-DQSAEERRATIAKSYAHLGLGS 383
            G     G E ++WDAVLAEA+SVVE+D+S EIP+ A RE FRRTL+ LL+NIL  +E RR VR+ N VFQEN+GRWACGR LMR+AG+ M+R   +       ++GV  +RG+        Y+WVA   RS G + M++ L+ ALE Q                                +   DP   +A+             AL    RL P  E ++DF+R+RREQD  F++ALRRDR+A A+ K  AP         +   D       GP P               EA+  E   G  ++GG     G       P +++ E+RRA IA SYA LGLGS
Sbjct:  245 GVAADAGAENREWDAVLAEALSVVEFDVSDEIPAGANREEFRRTLIVLLRNILAGNERRRRVRNDNVVFQENIGRWACGRQLMRMAGFTMERESSSRDDGGDADWGVNEQRGS--------YVWVARERRSRGRLAMVQGLVEALEGQGTTATEDXXXXXXXXXXXXXXXXXXXXXXXXXSARQDPGEPLARTGWYAFAATGSRAALPPPLRLSPAVEADDDFSRVRREQDEAFEEALRRDREAPASRKTKAPAFGDDDTQHVGENDNRQEESQGPPP---------------EAEGDEDVGGGRSLGGIGVGHGDGSTDPPPAEETTEQRRAKIALSYARLGLGS 567
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig10.165.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FP75_ECTSI2.320e-4137.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036339PUB-like domain superfamilySUPERFAMILY143503PUG domain-likecoord: 112..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig10contigD-herbacea_F_contig10:972981..976642 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig10.165.1mRNA_D-herbacea_F_contig10.165.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig10 971783..976823 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig10.165.1 ID=prot_D-herbacea_F_contig10.165.1|Name=mRNA_D-herbacea_F_contig10.165.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=384bp
MVYWDDILDGPRGHHAVSRGAYCDGIEEWDQVRRVSRGGGTGRCLDSNAD
DGDGLGSRFSDGILRASGGFHARTGGATTTVGTEKKDWDAVLAEAISVVE
WDLSAEIPSEALREGFRRTLLKLLKNILGKHEGRRTVRDRNTVFQENVGR
WACGRCLMRLAGYVMQRAPGTEYGVAAERGTAASGGELGYIWVAHAPRSS
GHVDMLECLMGALEDQAMLGIMRTGSGSRAVDAQGVQSPLLTEDVDPVTE
VAQALEMGTRLGPTDEENDFTRIRREQDMEFQDALRRDRDAAAAAKVAPM
ISTGDATSSNLDGPVPSVSSAPYSRDTPAANEADTVESNAGLLTIGGGSD
KEGVVVVASRPDQSAEERRATIAKSYAHLGLGS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036339PUB-like_dom_sf