prot_D-herbacea_F_contig10.164.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig10.164.1
Unique Nameprot_D-herbacea_F_contig10.164.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length557
Homology
BLAST of mRNA_D-herbacea_F_contig10.164.1 vs. uniprot
Match: D7FP76_ECTSI (Pseudouridine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP76_ECTSI)

HSP 1 Score: 606 bits (1562), Expect = 3.640e-212
Identity = 317/450 (70.44%), Postives = 356/450 (79.11%), Query Frame = 0
Query:  129 TPPDAFALTGEERLQKFLSHAGLDSRRQCEQIILDGRVRVNGKMVKELGLKVDPRRDQVHVDGDRVFMRPSSEVQWVALNKPKGVICTVSDELGRPTAVGAIPRGREMRLVPVGRLDRDSCGLILLTNENSWINPLTHPSYGHEKTYRVSITSGYPSEEEWSTLTQGMLLDGDPNPTRPCIVEVVDYDRRSLMTTVDIIIREGKNRQIRRMFEGIGHDVRSITRISHGPIRLKGLRPGEWRSLEKWEIEKLKNLTTKTLKSPKKVASP-----QARERTISRGGSRAKTASKNPPNSPQTYDRQEARRDALDEEEDEWNMTGAWDRSGVRKAVPPSREQGS--------------NRDKVFSNDEDYEWQTASWARTDDRQAAG-GRAKGDKGKGGK-KAAATEADRILEKIAQGE-PLKAPAWEGGGKVERDNRSGARSKGSWGKDRRR 556
            +PPDAFAL GEERLQKFLSHAGLDSRRQCEQ+ILDGRVRVNGKMVKELG+KV+PRRDQVHVDG+RV MRP SE++WVALNKPKGVICTVSDELGRPTAV +IPRG EMRLVPVGRLDRDSCGL+LLTNENSWINPLTHPSYGHEKTYRV++TSGYP+ EEW  LTQGMLLDGDPNPTRPCIVEVV+YDRR+ +TTVDIIIREGKNRQIRRMFEGIGH+V+SITR+SHGPIRLK LRPGEWR LE+WEIEKLKNLTTKTLKSP K  +P     + R R  +  G  +   +     S Q Y   E RRDALDEEEDEWN  GAWDRSGVRKAV PS   G+                +  F +D+D+EWQTASWAR D+++    G  KG +   GK KA   E DRILE+I +G+  L+APAWEGGG+V+RDNRS A  K  W   R R
Sbjct:   24 SPPDAFALGGEERLQKFLSHAGLDSRRQCEQMILDGRVRVNGKMVKELGVKVNPRRDQVHVDGNRVSMRPDSEIKWVALNKPKGVICTVSDELGRPTAVASIPRGLEMRLVPVGRLDRDSCGLLLLTNENSWINPLTHPSYGHEKTYRVALTSGYPTTEEWDVLTQGMLLDGDPNPTRPCIVEVVNYDRRTRVTTVDIIIREGKNRQIRRMFEGIGHEVKSITRVSHGPIRLKNLRPGEWRELEQWEIEKLKNLTTKTLKSPAKQLAPTPTRAEGRHRQAAAAGRMSSRMT-----SQQQYHGSEYRRDALDEEEDEWNQVGAWDRSGVRKAVAPSARAGAPATTASARGGGTPPQGEPAFFDDDDHEWQTASWARKDEKEPTRQGTGKGSRSSSGKRKARVNEGDRILERIKKGDVKLEAPAWEGGGRVDRDNRSNASRKKGWPSSRNR 468          
BLAST of mRNA_D-herbacea_F_contig10.164.1 vs. uniprot
Match: A0A6H5JKH0_9PHAE (S4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKH0_9PHAE)

HSP 1 Score: 576 bits (1484), Expect = 2.930e-199
Identity = 312/444 (70.27%), Postives = 343/444 (77.25%), Query Frame = 0
Query:   29 MPPSRDAFAIRLYPRVVEAVMMTCLLWGTAHCLLAAPGPRLSG-VSSRQDFHSFARHHPSS--CVRHGVAGWRRSCTSMAMPGGRGRGGGGQRXXXXXXXXXGTPPDAFALTGEERLQKFLSHAGLDSRRQCEQIILDGRVRVNGKMVKELGLKVDPRRDQVHVDGDRVFMRPSSEVQWVALNKPKGVICTVSDELGRPTAVGAIPRGREMRLVPVGRLDRDSCGLILLTNENSWINPLTHPSYGHEKTYRVSITSGYPSEEEWSTLTQGMLLDGDPNPTRPCIVEVVDYDRRSLMTTVDIIIREGKNRQIRRMFEGIGHDVRSITRISHGPIRLKGLRPGEWRSLEKWEIEKLKNLTTKTLKSPKKVASP-----QARERTISRGGSRAKTASKNPPNSPQTYDRQEARRDALDEEEDEWNMTGAWDRSGVRKAVPPSREQGS 464
            MP  R+    RL+PRV   ++    L GTA CL+A P  RL+G V +          H SS  CVR    G R     M MPGG         XXXXXXX  GTPPDAFAL GEERLQKFLSHAGLDSRRQCEQ+ILDGRVRVNGKMVKELG+KV+PRRDQVHVDG+RV MRP SE++WVALNKPKGVICTVSDELGRPTAVG+IPRG EMRLVPVGRLDRDSCGL+LLTNENSWINPLTHPSYGHEKTYRV++TSGYP+ EEW  LTQGMLLDGDPNPTRPCIVEVV+YDRR+ +TTVDIIIREGKNRQIRRMFEGIGH+V+SITR+SHGPIRLK LRPGEWR LE+WEIEKLKNLTTKTLKSP K  +P     + R R  +  G  +   +     S Q Y   E RRDALDEEEDEWN  GAWDRSGVRKAV PS   G+
Sbjct:    1 MPSPREYSVARLHPRVPRTLVAALWLLGTAQCLVAPPSARLTGGVPNGARIVGSRSWHDSSPCCVRQRSTGSRARTHVMVMPGGXXXX--XXXXXXXXXXARGTPPDAFALGGEERLQKFLSHAGLDSRRQCEQMILDGRVRVNGKMVKELGVKVNPRRDQVHVDGNRVSMRPDSEIKWVALNKPKGVICTVSDELGRPTAVGSIPRGLEMRLVPVGRLDRDSCGLLLLTNENSWINPLTHPSYGHEKTYRVALTSGYPTTEEWDVLTQGMLLDGDPNPTRPCIVEVVNYDRRTRVTTVDIIIREGKNRQIRRMFEGIGHEVKSITRVSHGPIRLKNLRPGEWRQLEQWEIEKLKNLTTKTLKSPAKQLAPTPTRAEGRHRQAAAAGRMSSRMT-----SQQQYHGSEYRRDALDEEEDEWNQVGAWDRSGVRKAVAPSARAGA 437          
BLAST of mRNA_D-herbacea_F_contig10.164.1 vs. uniprot
Match: A0A836CPN1_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPN1_9STRA)

HSP 1 Score: 337 bits (863), Expect = 3.680e-108
Identity = 161/271 (59.41%), Postives = 201/271 (74.17%), Query Frame = 0
Query:  128 GTPPDAFALTGEERLQKFLSHAGLDSRRQCEQIILDGRVRVNGKMVKELGLKVDPRRDQVHVDGDRVFMRPSSEVQWVALNKPKGVICTVSDELGRPTAVGAIPRGREMRLVPVGRLDRDSCGLILLTNENSWINPLTHPSYGHEKTYRVSITSGYPSEEEWSTLTQGMLLDGDPNPTRPCIVEVVDYDRRSLMTTVDIIIREGKNRQIRRMFEGIGHDVRSITRISHGPIRLKGLRPGEWRSLEKWEIEKLKNLTTKTLKSPKKVASPQA 398
            G   D   L   ERL K L+HAG+DSRRQCEQ+ILDGRVRVNGK+V  LG +VDPR+D + VDG +V +R   E  WVA++KPKGVI + +DELGR T V  IP    MRL+PVGRLDRDS GL+LLTN+N+W+N LTHPSYGHEK YRV+IT GYPS   W  +T+GM+L+G+  PT+PC +E++ YD R     +D+++REGKNRQIRRMFE IGH VR+ITR+ HGPI LK LRPGEWR+L   E+E+LK    +    PK+ AS +A
Sbjct:   27 GAAKDQLRLGSSERLHKVLAHAGVDSRRQCEQMILDGRVRVNGKIVSSLGTRVDPRKDDLLVDGQKVALRSREETAWVAIHKPKGVITSTNDELGRRTVVDLIPGADRMRLLPVGRLDRDSAGLLLLTNDNAWVNVLTHPSYGHEKLYRVAITEGYPSPPAWKKVTEGMMLEGETAPTQPCDIEIISYDERRKHLVLDVVLREGKNRQIRRMFEAIGHPVRAITRLKHGPIGLKQLRPGEWRALTASEVERLKRKGAE----PKRGASHRA 293          
BLAST of mRNA_D-herbacea_F_contig10.164.1 vs. uniprot
Match: A0A7S2WX07_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WX07_9STRA)

HSP 1 Score: 257 bits (656), Expect = 2.490e-76
Identity = 126/259 (48.65%), Postives = 176/259 (67.95%), Query Frame = 0
Query:  141 RLQKFLSHAGLDSRRQCEQIILDGRVRVNGKMVKELGLKVDPRRDQVHVDGDRVFMRPSSEVQWVALNKPKGVICTVSDELGRPTAVGAIPRGREMRLVPVGRLDRDSCGLILLTNENSWINPLTHPSYGHEKTYRVSITSGYPSEEEWSTLTQGMLLDGDPNPTRPCIVEVVDYDRRSLMTTVDIIIREGKNRQIRRMFEGIGHDVRSITRISHGPIRLKGLRPGEWRSLEKWEIEKLKNLTTKTLKSPKKVASPQAR 399
            RLQK LSHAG+ SRR+ E+ I DGRV VN ++V ELG KVDP++D+V VDG+ V  RP  E++WVA+ KPKGV+CT+ DE  R T + A+P     RL+PVGRLDR+S GL+LLTN+NSW++ LTHPS+G  K YR+ +  G+ S +    + QG+ L  +     PC VE VD D R   T++ I+++EG+NRQIRRM + +G  V+S+TR S G + L+ L PG+WR L K E++ LK   T   +  ++  +P+ R
Sbjct:   92 RLQKLLSHAGVCSRREAERYIEDGRVTVNERLVTELGTKVDPQKDRVTVDGELVSQRPVEEIRWVAMYKPKGVVCTMEDEKDRKTVMDALPGASRARLLPVGRLDRNSAGLLLLTNDNSWLHKLTHPSHGCTKMYRI-VVEGFLSNDVLRRIAQGLQLPDEERKLSPCAVEFVDQDLRQRTTSLRIVLQEGRNRQIRRMMDFVGFPVKSLTRTSVGSVGLRDLSPGDWRELSKKEVDALKRTCTPRHRGDRRATTPRDR 349          
BLAST of mRNA_D-herbacea_F_contig10.164.1 vs. uniprot
Match: A0A0G4ETA8_VITBC (S4 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ETA8_VITBC)

HSP 1 Score: 250 bits (638), Expect = 9.540e-74
Identity = 123/273 (45.05%), Postives = 182/273 (66.67%), Query Frame = 0
Query:  131 PDAFALTGEERLQKFLSHAGLDSRRQCEQIILDGRVRVNGKMVKELGLKVDPRRDQVHVDGDRVFMRPSSEVQWVALNKPKGVICTVSDELGRPTAVGAIPRGREMRLVPVGRLDRDSCGLILLTNENSWINPLTHPSYGHEKTYRVSITSGYPSEEEWSTLTQGMLLDGDPNPTRPCIVEVVDYDRRSLMT--TVDIIIREGKNRQIRRMFEGIGHDVRSITRISHGPIRLKGLR-PGEWRSLEKWEIEKLKNLTTKTLKSPKKVASPQARE 400
            P     +  ERLQK +S AG+ SRR  E++ILDGRVRVNG +V +LG+KVD   D+V VDG ++ +RP  E++W+A++KPKG IC+++D+  R T    +P    +RL+PVGRLDRDS GL+LLTN+N W++PLTHPSYGH+K Y V++ +G P  +  + L +G+LL G+   T P  + V    + S  +  T+++ +REG+NRQ+RRM E IGH V +I R+  GP+ LKG+  PG+WR L+  E+  LK       K+ +++   Q ++
Sbjct:  128 PSLEERSAPERLQKVISRAGIASRRAAEEMILDGRVRVNGVVVTDLGVKVDALGDRVTVDGRKIAVRPPEEIKWIAVHKPKGYICSMNDDRDRKTVKDLVPMAERLRLLPVGRLDRDSSGLLLLTNDNKWLHPLTHPSYGHQKRYIVTVDNGTPKYDVLNELAEGVLLPGERTKTAPVSIGVFFEPKTSRKSFGTLEVTLREGRNRQLRRMMEFIGHPVLNIRRVDFGPLTLKGITTPGQWRELKPSEVFMLKRAVITRAKARERMLRKQRKD 400          
BLAST of mRNA_D-herbacea_F_contig10.164.1 vs. uniprot
Match: A0A0G4HIW2_9ALVE (S4 domain-containing protein (Fragment) n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HIW2_9ALVE)

HSP 1 Score: 248 bits (633), Expect = 1.770e-72
Identity = 119/248 (47.98%), Postives = 169/248 (68.15%), Query Frame = 0
Query:  135 ALTGEERLQKFLSHAGLDSRRQCEQIILDGRVRVNGKMVKELGLKVDPRRDQVHVDGDRVFMRPSSEVQWVALNKPKGVICTVSDELGRPTAVGAIPRGREMRLVPVGRLDRDSCGLILLTNENSWINPLTHPSYGHEKTYRVSITSGYPSEEEWSTLTQGMLLDGDPNPTRPCIVEVV--DYDRRSLMTTVDIIIREGKNRQIRRMFEGIGHDVRSITRISHGPIRLKGLRPGEWRSLEKWEIEKLK 380
            ++  +ERLQK +S +G+ SRR  E +I +GRVRVNG++VK++G +V+PR DQ+ VDG R+ MRP SE++W+ L+KPKG ICT++DE  R + +  +P    +RL+PVGRLDRDS GLILLTN+N+W++ L+HPS+GH KTY+V + +G P  +    L +GM L  D   T P  + V+  +   +  + ++ + + EG+NRQIRRMFE IGH V SI RI  GP+ L  +  G WR L   EI  LK
Sbjct:  136 SVADKERLQKVISRSGISSRRAAEDLIEEGRVRVNGRVVKQMGTRVNPRLDQIQVDGKRISMRPPSEIKWILLHKPKGYICTMADERDRKSVLDLVPFASRLRLLPVGRLDRDSSGLILLTNDNAWLHLLSHPSFGHLKTYKVKVKNGVPFGDVLEPLAKGMYLGSDKEKTSPVEIRVMLDEKSHKEPLGSMTVSLLEGRNRQIRRMFESIGHPVHSIKRIRFGPLDLDKVGVGSWRQLNPTEIYSLK 383          
BLAST of mRNA_D-herbacea_F_contig10.164.1 vs. uniprot
Match: A0A7R9UB15_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UB15_9STRA)

HSP 1 Score: 232 bits (592), Expect = 1.190e-66
Identity = 125/271 (46.13%), Postives = 179/271 (66.05%), Query Frame = 0
Query:  141 RLQKFLSHAGLDSRRQCEQIILDGRVRVNGKMVKELGLKVDPRRDQVHVDGDRVFMRPSSEVQWVALNKPKGVICTVSDELGRPTAVGAIPRGREMRLVPVGRLDRDSCGLILLTNENSWINPLTHPSYGHEKTYRVSITSGYPSEEEWSTLTQG-MLLDGDPNPTRP-CIVEVVDYDRRSLMTTVDIIIREGKNRQIRRMFEGIGHDVRSITRISHGPIRLKGLRPGEWRSLEKWEIEKLKNLTTKTLKSPKKVASPQARERTISRGGSR 409
            R+QK L+ AG+ SRR  E+++ DGRVRVNGK+V   G K  P    + VDG  V  R  + + W  ++KPKGV+ T+ D+LGR T    +PR RE+RLVPVGRLDRD+ G+ILLTN+N W++ L+HP++GH K YRV + +G    + + TL +G ++L+GD  P  P  + E + Y   +  T++++I+REG+NRQIRRM E +GH VR+I R + GPI L  L+ GEWR+L K E+ +LK     + KSP+ + S Q R ++  R G R
Sbjct:  185 RVQKLLASAGICSRRDAEKLMADGRVRVNGKLVTTPGTKAKPDA-VITVDGMPVVQRDRNSIFWCVVHKPKGVLVTMEDDLGRKTVADLVPRARELRLVPVGRLDRDTSGVILLTNDNEWVHRLSHPAFGHLKRYRVVVKNGPVKADVYRTLQRGGVVLEGDERPLAPLAVAEEISYYADTKETSIEMILREGRNRQIRRMMEQLGHPVRTIVRTAVGPIGLGSLKAGEWRTLRKSEVLQLK---ASSEKSPR-LRSGQGRGKSRGRFGGR 450          
BLAST of mRNA_D-herbacea_F_contig10.164.1 vs. uniprot
Match: A0A7S0AM87_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0AM87_9DINO)

HSP 1 Score: 225 bits (574), Expect = 1.390e-61
Identity = 119/266 (44.74%), Postives = 167/266 (62.78%), Query Frame = 0
Query:  137 TGEERLQKFLSHAGLDSRRQCEQIILDGRVRVNGKMVKELGLKVDPRRDQVHVDGDRVFMRPSSEVQWVALNKPKGVICTVSDELGRPTAVGAIPRGREMRLVPVGRLDRDSCGLILLTNENSWINPLTHPSYGHEKTYRVSITSGYPSEEEWSTLTQGMLLDGDPNPTRPCI-VEVVDYDRRSLMTTVDIIIREGKNRQIRRMFEGIGHDVRSITRISHGPIRL-KGLRPGEWRSLEKWEIEKLKNLTTKTLKSPKKVASPQARE 400
            TGE  L KFLSHAG  SRR+  +++L GRV++NG++V+++  KVDP++D+V +DG R  ++   E+ W+ LNKPKGVI T  D  GR T +  +P  ++ RL+PVGR+DR++ GL+LLTN+  W   + HP Y H K Y+V I +G PS  +   L  G+ L  +P P  P    EV+  ++   + T+   ++EGK RQIRRMFE IGH V+SI R   G ++L + L+ GEWR L   EI +LK  T   LK P K    Q RE
Sbjct:  259 TGEVWLNKFLSHAGACSRRKVAELVLQGRVQINGEVVQDICTKVDPKKDKVFLDGQRKELKTLGEIIWIMLNKPKGVISTFEDSEGRKTVMDLVPFAKKRRLIPVGRIDRNAAGLLLLTNDYEWQTIMIHPRYEHTKRYKVEIYNGLPSRVKMQALRNGLELPDEPRPLLPLEDFEVMQQNKTDEIATIKFTLKEGKYRQIRRMFEYIGHPVKSIKRTEFGLLQLDRSLKAGEWRMLTPKEIRRLKGPTI--LKRPMKHPLDQQRE 522          
BLAST of mRNA_D-herbacea_F_contig10.164.1 vs. uniprot
Match: A0A0U9I5Y9_9FIRM (Pseudouridine synthase n=1 Tax=Tepidanaerobacter syntrophicus TaxID=224999 RepID=A0A0U9I5Y9_9FIRM)

HSP 1 Score: 209 bits (531), Expect = 2.310e-60
Identity = 119/242 (49.17%), Postives = 157/242 (64.88%), Query Frame = 0
Query:  141 RLQKFLSHAGLDSRRQCEQIILDGRVRVNGKMVKELGLKVDPRRDQVHVDGDRVFMRPSSEVQWVALNKPKGVICTVSDELGRPTAVGAIPRGREMRLVPVGRLDRDSCGLILLTNENSWINPLTHPSYGHEKTYRVSITSGYPSEEEWSTLTQGMLLDGDPNPTRPCIVEVVDYDRRSLMTTVDIIIREGKNRQIRRMFEGIGHDVRSITRISHGPIRLKGLRPGEWRSLEKWEIEKLKNL 382
            RLQK+LS AG+ SRR CE++ILDGRV VNGK+++ELG K+DP  D+V VDG     R  S   ++A+NKP+GVI TV D  GRPT +  +P+  E R+ PVGRLD+D+ GLILLTN+      +THP +   KTY   I  G    ++ +TL +G+ L+     T P  ++++D  R S  T V I I EGK RQIRRMFE +GH V  +TR   G I L GL+PG+WR L + EI  +KNL
Sbjct:    4 RLQKYLSQAGIASRRACEKLILDGRVTVNGKIIRELGTKIDPEVDKVRVDGKAC--RLESRFIYIAMNKPEGVITTVKDTHGRPTILDLLPKFPE-RIFPVGRLDKDTKGLILLTNDGQAAYKITHPKFNITKTYIARI-KGIIDNKKVTTLEKGIKLED--GITAPAKIDILDVSRDS--TIVKIKIHEGKKRQIRRMFESVGHPVLELTRTHIGNISLCGLQPGKWRYLSQDEINYIKNL 237          
BLAST of mRNA_D-herbacea_F_contig10.164.1 vs. uniprot
Match: A0A0M9UDB6_9CHLR (Pseudouridine synthase n=1 Tax=Ardenticatena maritima TaxID=872965 RepID=A0A0M9UDB6_9CHLR)

HSP 1 Score: 208 bits (529), Expect = 9.560e-60
Identity = 119/264 (45.08%), Postives = 167/264 (63.26%), Query Frame = 0
Query:  139 EERLQKFLSHAGLDSRRQCEQIILDGRVRVNGKMVKELGLKVDPRRDQVHVDGDRVFMRPSSEVQWVALNKPKGVICTVSDELGRPTAVGAIPRGREMRLVPVGRLDRDSCGLILLTNENSWINPLTHPSYGHEKTYRVSITSGYPSEEEWSTLTQGMLLDGDPNPTRPCIVEVVDYDRRSLMTTV-DIIIREGKNRQIRRMFEGIGHDVRSITRISHGPIRLKGLRPGEWRSLEKWEIEKLKNLTTKTLKSPKKVASPQARER 401
            +ERLQK L+ AG+ SRR+ E++I  GRV VNG+MV ELG KVDP +D++ VDG RV +    + +++AL+KP+  I T+ D+ GR T V  +P   E  LVPVGRLD +S GLILLTN+   +N LTHP Y HEK Y V +  G+P+E+ +  +  G++L+ D   T P  V V   +R++  TT+  +I+REG+ RQIRRMF  +GH VR + R+  GPI L  L  G WR L   E++ L+ L  +  +  K    P+ R R
Sbjct:    3 KERLQKVLARAGVASRREAEEMIRQGRVDVNGRMVTELGTKVDPEQDEIRVDGVRVRLDQVRK-RYIALHKPRHYITTMRDQFGRKTVVDLVPFAAEEHLVPVGRLDAESEGLILLTNDGDLVNVLTHPRYQHEKEYVVEVY-GHPNEDFFEAVKHGVVLE-DGTRTLPAKVRV---ERKTDDTTILRVILREGRKRQIRRMFGILGHPVRKLKRVRIGPITLGNLPRGAWRELTPKEVKALQQLVREQTRKTKTARRPRQRRR 260          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig10.164.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP76_ECTSI3.640e-21270.44Pseudouridine synthase n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JKH0_9PHAE2.930e-19970.27S4 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A836CPN1_9STRA3.680e-10859.41Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A7S2WX07_9STRA2.490e-7648.65Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A0G4ETA8_VITBC9.540e-7445.05S4 domain-containing protein n=1 Tax=Vitrella bras... [more]
A0A0G4HIW2_9ALVE1.770e-7247.98S4 domain-containing protein (Fragment) n=1 Tax=Ch... [more]
A0A7R9UB15_9STRA1.190e-6646.13Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S0AM87_9DINO1.390e-6144.74Hypothetical protein n=1 Tax=Pyrodinium bahamense ... [more]
A0A0U9I5Y9_9FIRM2.310e-6049.17Pseudouridine synthase n=1 Tax=Tepidanaerobacter s... [more]
A0A0M9UDB6_9CHLR9.560e-6045.08Pseudouridine synthase n=1 Tax=Ardenticatena marit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 140..201
e-value: 1.6E-11
score: 54.3
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 140..182
e-value: 2.8E-13
score: 49.4
IPR002942RNA-binding S4 domainPROSITEPS50889S4coord: 140..209
score: 13.742
IPR000748Pseudouridine synthase, RsuA/RluB/E/FTIGRFAMTIGR00093TIGR00093coord: 208..372
e-value: 3.9E-42
score: 141.7
IPR042092Pseudouridine synthase, RsuA/RluB/E/F, catalytic domainGENE3D3.30.70.1560coord: 271..359
e-value: 2.2E-48
score: 165.9
IPR006145Pseudouridine synthase, RsuA/RluAPFAMPF00849PseudoU_synth_2coord: 204..341
e-value: 9.5E-17
score: 61.5
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 137..197
e-value: 4.2E-21
score: 76.0
NoneNo IPR availableGENE3D3.30.70.580coord: 204..376
e-value: 2.2E-48
score: 165.9
NoneNo IPR availablePANTHERPTHR21600:SF2RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 139..384
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 139..384
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 124..245
IPR018496Pseudouridine synthase, RsuA/RluB/E/F, conserved sitePROSITEPS01149PSI_RSUcoord: 242..256
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 204..376

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig10contigD-herbacea_F_contig10:964244..970541 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig10.164.1mRNA_D-herbacea_F_contig10.164.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig10 964244..970541 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig10.164.1 ID=prot_D-herbacea_F_contig10.164.1|Name=mRNA_D-herbacea_F_contig10.164.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=557bp
TTSRHHLPLPPSNTTRHTTSIRLQRPQTMPPSRDAFAIRLYPRVVEAVMM
TCLLWGTAHCLLAAPGPRLSGVSSRQDFHSFARHHPSSCVRHGVAGWRRS
CTSMAMPGGRGRGGGGQRGGRGGGRGRGTPPDAFALTGEERLQKFLSHAG
LDSRRQCEQIILDGRVRVNGKMVKELGLKVDPRRDQVHVDGDRVFMRPSS
EVQWVALNKPKGVICTVSDELGRPTAVGAIPRGREMRLVPVGRLDRDSCG
LILLTNENSWINPLTHPSYGHEKTYRVSITSGYPSEEEWSTLTQGMLLDG
DPNPTRPCIVEVVDYDRRSLMTTVDIIIREGKNRQIRRMFEGIGHDVRSI
TRISHGPIRLKGLRPGEWRSLEKWEIEKLKNLTTKTLKSPKKVASPQARE
RTISRGGSRAKTASKNPPNSPQTYDRQEARRDALDEEEDEWNMTGAWDRS
GVRKAVPPSREQGSNRDKVFSNDEDYEWQTASWARTDDRQAAGGRAKGDK
GKGGKKAAATEADRILEKIAQGEPLKAPAWEGGGKVERDNRSGARSKGSW
GKDRRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020103PsdUridine_synth_cat_dom_sf
IPR018496PsdUridine_synth_RsuA/RluB_CS
IPR036986S4_RNA-bd_sf
IPR006145PsdUridine_synth_RsuA/RluA
IPR042092PsdUridine_s_RsuA/RluB/E/F_cat
IPR000748PsdUridine_synth_RsuA/RluB/E/F
IPR002942S4_RNA-bd