prot_D-herbacea_F_contig10.154.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig10.154.1
Unique Nameprot_D-herbacea_F_contig10.154.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length214
Homology
BLAST of mRNA_D-herbacea_F_contig10.154.1 vs. uniprot
Match: D7FP88_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP88_ECTSI)

HSP 1 Score: 211 bits (536), Expect = 1.060e-65
Identity = 120/217 (55.30%), Postives = 158/217 (72.81%), Query Frame = 0
Query:    1 MFSPRILIGALAVLMLSTSLEAFSVCPV-----SKSSLGCRRAMASASPGVLAR--TSSVSHVSRAGASGWVRSSALRMAEDASTSDVSVTNMEEREFQLEELEDRDVMDTSIVLGKDGSITAGATNGPLPLSVRGKWSFDGETFNMNISREFDASIPYTVERVYTGYIEEMLPATDTLILTGDIVMEDMAVGFFKMISAPSDILDSLKHIDEQITQ 210
            MF  R +IG LA+L+LS  LEAFSV P      SK+     R+  + +P  +    TS+ +     GAS   RS+ALRM  +  T  ++ T+M+ REFQLEELEDRDV +TS+VL +DGS+TAG TNGP+P+ VRGKWSFDG  F M++ REFDASIPY V RV TGY+EE+L ATDT+I+TGDIVME+M VGFFKMIS+ +D++DS++HID+Q+ +
Sbjct:    1 MFPTRSMIGVLAMLLLSARLEAFSVRPAVTRRGSKADSSSSRSGRALAPSAVPDRGTSAAASWLWTGASRRPRSTALRMGLETVTG-LTSTDMQTREFQLEELEDRDVAETSVVLNEDGSVTAGKTNGPIPIQVRGKWSFDGTAFRMDLHREFDASIPYMVSRVMTGYVEEVLSATDTVIITGDIVMEEMEVGFFKMISSQTDLMDSIQHIDQQMAK 216          
BLAST of mRNA_D-herbacea_F_contig10.154.1 vs. uniprot
Match: A0A835Z9V2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9V2_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.870e-36
Identity = 68/124 (54.84%), Postives = 89/124 (71.77%), Query Frame = 0
Query:   89 REFQLEELEDRDVMDTSIVLGKDGSITAGATNGPLPLSVRGKWSFDGE-TFNMNISREFDASIPYTVERVYTGYIEEMLPATDTLILTGDIVMEDMAVGFFKMISAPSDILDSLKHIDEQITQR 211
            REFQLEELED++   TS+VL  DGS++ GAT+GPLP S  G WS D E  F M + REF++S  Y V R +TG IEE++ AT T+IL G+I M+  AVGFFKMIS PSDI D  + +DE++ ++
Sbjct:   67 REFQLEELEDKETAATSVVLNGDGSVSFGATDGPLPKSTTGSWSMDDEGAFRMTVVREFESSYSYEVTRTFTGVIEEVMEATKTIILAGEIYMDGDAVGFFKMISNPSDITDVTEKLDERVREK 190          
BLAST of mRNA_D-herbacea_F_contig10.154.1 vs. uniprot
Match: H6WBB0_VAULI (Uncharacterized protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBB0_VAULI)

HSP 1 Score: 130 bits (326), Expect = 5.400e-35
Identity = 62/118 (52.54%), Postives = 90/118 (76.27%), Query Frame = 0
Query:   89 REFQLEELEDRDVMDTSIVLGKDGSITAGATNGPLPLSVRGKWSFDGETFNMNISREFDASIPYTVERVYTGYIEEMLPATDTLILTGDIVMEDMAVGFFKMISAPSDILDSLKHIDE 206
            R+  LEELED+D  +TSIVL +DGS++ GAT+GP+P+S RG+WS + + F M I+REF++  P+ V R ++G IEE+L  T T+IL+GDI+M++  VGFFKMIS  SDI D +K+ ++
Sbjct:   16 RQISLEELEDKDSCETSIVLNEDGSVSLGATSGPIPMSARGEWSMEEKNFEMEITREFESIEPFEVTRKFSGEIEEILKETKTIILSGDILMDETPVGFFKMISNLSDIEDGVKNAEK 133          
BLAST of mRNA_D-herbacea_F_contig10.154.1 vs. uniprot
Match: B8BY48_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BY48_THAPS)

HSP 1 Score: 64.3 bits (155), Expect = 3.420e-9
Identity = 45/148 (30.41%), Postives = 77/148 (52.03%), Query Frame = 0
Query:   77 STSDVSVTNMEEREFQLEELEDRDVMDTSIVLGKDGSITAGATNGPLPLSVRGKWSF------DGETFNMNISREFD----------ASIPYTVERVYTGYIE---EMLPATDTLILTGDIVMEDMAVGFFKMI-SAPSDILDSLKHI 204
            S++ +S  ++E +EFQLEELED++  +T + L  DGS+T G +NGP   S +G W        + + F M + R ++            I Y V+R + G IE   + +  + T+    D    D  +GFF +I +A S+ ++ +K +
Sbjct:   45 SSTSLSKADLEGKEFQLEELEDKEESETELWLNSDGSVTLGQSNGPRVASCKGDWHLIETATQEDKPFRMRLVRTYEYGTHSGSNQVGEISYDVKREFWGNIEMVGDSISVSGTMHGLDDRDQIDCDLGFFTIIDAAASEGIEGVKSV 192          
BLAST of mRNA_D-herbacea_F_contig10.154.1 vs. uniprot
Match: A0A7S2PXC1_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PXC1_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 3.640e-8
Identity = 42/135 (31.11%), Postives = 67/135 (49.63%), Query Frame = 0
Query:   89 REFQLEELEDRDVMDTSIVLGKDGSITAGATNGPLPLSVRGKWSF------DGETFNMNISREFDA-------SIPYTVERVYTGYIEEM-------------LPATDT----LILTGDIVMEDMAVGFFKMISA 193
            +EFQLEELED++  +T + L +DGS++ GA+NGPL     G+W          + F M ++R F++        I Y + R + G IE +             LP+ +T     +   D  M++  +G+F MI A
Sbjct:   76 KEFQLEELEDKEECETEVWLNEDGSVSLGASNGPLVRDYAGEWHLLETAGVGYQPFRMRLTRRFESPGSGRIGDIQYDLTREFWGSIEMVGESICVNGKIHGALPSAETNQYAQMYHDDQAMQETEIGYFTMIDA 210          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig10.154.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FP88_ECTSI1.060e-6555.30Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z9V2_9STRA1.870e-3654.84Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
H6WBB0_VAULI5.400e-3552.54Uncharacterized protein n=1 Tax=Vaucheria litorea ... [more]
B8BY48_THAPS3.420e-930.41Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2PXC1_9STRA3.640e-831.11Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..213
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.888

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig10contigD-herbacea_F_contig10:782266..795181 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig10.154.1mRNA_D-herbacea_F_contig10.154.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig10 782225..795695 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig10.154.1 ID=prot_D-herbacea_F_contig10.154.1|Name=mRNA_D-herbacea_F_contig10.154.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=214bp
MFSPRILIGALAVLMLSTSLEAFSVCPVSKSSLGCRRAMASASPGVLART
SSVSHVSRAGASGWVRSSALRMAEDASTSDVSVTNMEEREFQLEELEDRD
VMDTSIVLGKDGSITAGATNGPLPLSVRGKWSFDGETFNMNISREFDASI
PYTVERVYTGYIEEMLPATDTLILTGDIVMEDMAVGFFKMISAPSDILDS
LKHIDEQITQRAA*
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