prot_D-herbacea_F_contig10.138.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig10.138.1
Unique Nameprot_D-herbacea_F_contig10.138.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length344
Homology
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BLAST of mRNA_D-herbacea_F_contig10.138.1 vs. uniprot
Match: A0A6H5KTG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTG1_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 4.780e-66
Identity = 137/312 (43.91%), Postives = 172/312 (55.13%), Query Frame = 0 
Query:   71 LPVARRTNRMSEINQWHTLHRHVSSTGSLAAGSEGGGACTMHLRRSSFSLSTRHFPEKPVEVAPLDLSPVSRACVNGDVGGGPGGGLADPALATNRSPAPPDRAARRELDGAAERAGGWGWKRVI--------------------------------CEAERPNLRKVKPKSYAWALTEIRVVS-------GVSPWAQPRAEYLVVACLGRERLVAGWRRASDFERLARVARRAWMSKACLAWETLERARRMDGGGLCNLPWVMRGRRLDATYLQNKARFLEEFLKQFIFEANSKDALLIFLDLRRRSTLEI 343
            LPV +  +  + +N WH L+  VSS+G L+A S  G  CTMH+RR+SF +STRHFPEKP                                      P PP++  +R  D  A     WG  R +                                   E P   +  P SY+WA+TEIRV+        G++P   P A+YLVV C+GRE+LVAGWRRASDFE+LA  A +AWM K+C+AWE LERARR DGGG CN+P V+R RRLD+ YLQNKARFLEEFLKQ+ FEA SKDALL FLDL++ +T E+
Sbjct:  265 LPVTKARSTTTHLNSWHPLYPTVSSSGRLSAESCSG-KCTMHIRRTSFPISTRHFPEKP--------------------------------------PTPPNK--KRRSDRTARSGSSWGSGRPLNGSPLLQGRXXXXXXXXXXXXXXXXXXXXXXXXXXESPKAGR--PTSYSWAVTEIRVIRPDLRFPLGLAP---PYAQYLVVVCMGREKLVAGWRRASDFEKLAATASKAWMPKSCVAWEALERARRGDGGGPCNMPVVLRPRRLDSVYLQNKARFLEEFLKQYFFEAGSKDALLSFLDLKKPATAEV 530
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BLAST of mRNA_D-herbacea_F_contig10.138.1 vs. uniprot
Match: D8LDV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDV4_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 3.500e-49
Identity = 87/147 (59.18%), Postives = 107/147 (72.79%), Query Frame = 0 
Query:  208 PKSYAWALTEIRVVSGVSPWAQPRA-----------EYLVVACLGRERLVAGWRRASDFERLARVARRAWMSKACLAWETLERARRMDGGGLCNLPWVMRGRRLDATYLQNKARFLEEFLKQFIFEANSKDALLIFLDLRRRSTLEI 343
            P S  W    + V S  +    P +           +YLVV C+GRE+LVAGWRRASDFE+LA +AR+AWM K+C+AWE LERARR+DGGG CN+P V+R RRLD+ YLQNKARFLEEFLKQ+ FEA SKDALL FLDL++ +T E+
Sbjct:  125 PSSLPWRCNRVEVESTATVSLSPESIVLGXXXXXXTKYLVVVCMGREKLVAGWRRASDFEKLAAIARKAWMPKSCVAWEALERARRVDGGGPCNMPVVLRPRRLDSVYLQNKARFLEEFLKQYFFEAGSKDALLSFLDLKKPATAEV 271
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig10.138.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KTG1_9PHAE4.780e-6643.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDV4_ECTSI3.500e-4959.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig10contigD-herbacea_F_contig10:427305..443754 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig10.138.1mRNA_D-herbacea_F_contig10.138.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig10 426838..444054 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig10.138.1 ID=prot_D-herbacea_F_contig10.138.1|Name=mRNA_D-herbacea_F_contig10.138.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=344bp
MRKVDPLLAGNGQQQQQANGHTNGEAKEQQQQQRRQELAPAYATGRITGT
GICITTSSGYCVPVAPTSASLPVARRTNRMSEINQWHTLHRHVSSTGSLA
AGSEGGGACTMHLRRSSFSLSTRHFPEKPVEVAPLDLSPVSRACVNGDVG
GGPGGGLADPALATNRSPAPPDRAARRELDGAAERAGGWGWKRVICEAER
PNLRKVKPKSYAWALTEIRVVSGVSPWAQPRAEYLVVACLGRERLVAGWR
RASDFERLARVARRAWMSKACLAWETLERARRMDGGGLCNLPWVMRGRRL
DATYLQNKARFLEEFLKQFIFEANSKDALLIFLDLRRRSTLEI*
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