prot_D-herbacea_F_contig10.136.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig10.136.1
Unique Nameprot_D-herbacea_F_contig10.136.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length599
Homology
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BLAST of mRNA_D-herbacea_F_contig10.136.1 vs. uniprot
Match: D8LDV3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDV3_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 8.110e-17
Identity = 55/101 (54.46%), Postives = 67/101 (66.34%), Query Frame = 0 
Query:  222 VTRDRELASDLGPSVVSTGTALIRPILPSTNRTPRVATAAVGQVEARHAREALPVLQLLVNLSSADPGAIATWLTNCTPG-WSPWGALKGLELELNNKVKK 321
            +TR  ELA  L P  VSTG AL+ PIL    R P  +T A G V++  A  A PVL+LLVNLS ADP AI  WL +C+P   SP GALKGL++ELN+ V+K
Sbjct:    1 MTRVEELARSLVPGAVSTGVALLMPILA---RKPH-STVAAGPVDSSMASSAFPVLELLVNLSCADPHAIYNWLASCSPDDGSPGGALKGLKIELNSGVEK 97
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig10.136.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LDV3_ECTSI8.110e-1754.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 41..343
e-value: 8.4E-6
score: 26.7
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 52..337

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig10contigD-herbacea_F_contig10:400241..410391 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig10.136.1mRNA_D-herbacea_F_contig10.136.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig10 400136..410391 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig10.136.1 ID=prot_D-herbacea_F_contig10.136.1|Name=mRNA_D-herbacea_F_contig10.136.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=599bp
MEEILRAVCPNTAAAAAVLGQGAMKTDHMSDASSQKEGGKAGALRTAEEN
VECLRAIKNALVGNDGAKQVALRLGVLARLLSFLDAASTAGDGDSAFPRE
ATATQAMAIFAILTSTKKRGDSFTPSAVRRIVEHIARALASPNERLQAAA
LRALTEMCVSGVIITRPAKLGHGESGATTTLSEALTRVAQLLLEKVAVVG
NHETTTWTPNIKSLGVEALAAVTRDRELASDLGPSVVSTGTALIRPILPS
TNRTPRVATAAVGQVEARHAREALPVLQLLVNLSSADPGAIATWLTNCTP
GWSPWGALKGLELELNNKVKKVRILAGLVLINCVQGRARLGGNFPSSTPL
HPNASFTKPSFEDPSGSGCDGGEGSGERRALDEVISHRVMPLLFRTMAGW
ASAPFPVSSRDSTCCFSAVSDDCFRVACLSSDGVNAEAVACAITMGLGLG
SRERQREAVRHGAVEALAAFLWRARAAVTSAQQQRTDTGNASHHPDRVVL
SRSSTIGDAGGDAIVIARATGEALGAMAILCERCVSARERLVALGFHSAL
SFWLTGDAAASDDDSMKEAAVPPPPATAAAAAAAAAEVTSAKVAEGSGD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR011989ARM-like