prot_D-herbacea_F_contig1.127.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig1.127.1
Unique Nameprot_D-herbacea_F_contig1.127.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length95
Homology
BLAST of mRNA_D-herbacea_F_contig1.127.1 vs. uniprot
Match: A0A6H5K2Y9_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Y9_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 6.070e-42
Identity = 72/90 (80.00%), Postives = 80/90 (88.89%), Query Frame = 0
Query:    4 GSDWSSTRKASRVECGDLFTLILTSKAELLSCGVGECVGGDGTNRKQAELVQSLAGFPTVWMACGNNHSVVIGAGGEAMAFGLNTHGQVG 93
            G  WSS R+ASRV CGDLFTLILTS+AE+ SCGVGECVGGDG +RKQA  V SLAGFPTVWMACGN+HSVVIGAGG+A+ FGLNTHGQ+G
Sbjct:  459 GQSWSSRRRASRVACGDLFTLILTSRAEVFSCGVGECVGGDGRDRKQAAPVPSLAGFPTVWMACGNSHSVVIGAGGDALGFGLNTHGQLG 548          
BLAST of mRNA_D-herbacea_F_contig1.127.1 vs. uniprot
Match: D7FWC7_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWC7_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 5.700e-27
Identity = 50/63 (79.37%), Postives = 57/63 (90.48%), Query Frame = 0
Query:   31 ELLSCGVGECVGGDGTNRKQAELVQSLAGFPTVWMACGNNHSVVIGAGGEAMAFGLNTHGQVG 93
            ++ SCGVGECVGGDG +RKQA  V SLAGFPTVWMACGN+HSVVIGAGG+A+ FGLNTHGQ+G
Sbjct:   58 QVFSCGVGECVGGDGRDRKQAAPVPSLAGFPTVWMACGNSHSVVIGAGGDALGFGLNTHGQLG 120          
BLAST of mRNA_D-herbacea_F_contig1.127.1 vs. uniprot
Match: UPI000D624777 (LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase HERC6 n=1 Tax=Cynoglossus semilaevis TaxID=244447 RepID=UPI000D624777)

HSP 1 Score: 55.1 bits (131), Expect = 1.090e-6
Identity = 30/88 (34.09%), Postives = 47/88 (53.41%), Query Frame = 0
Query:   10 TRKASRVECGDLFTLILTSKAELLSCGVG---ECVGGDGTNRKQAELVQSLAGFPTVWMACGNNHSVVIGAGGEAMAFGLNTHGQVGN 94
            +R  S + CG+  T +LT    +L+ G G   +      TN      V+ L G P   +ACG NH++V+G+ G+  AFG  + GQ+G+
Sbjct:  239 SRSVSFMSCGESHTAVLTKDGNVLTFGEGSHGQLGHASRTNEVYPRQVEGLDG-PATQIACGRNHTLVLGSSGQLWAFGNGSKGQIGH 325          
BLAST of mRNA_D-herbacea_F_contig1.127.1 vs. uniprot
Match: A0A6P3V6Q4_BOMIM (probable E3 ubiquitin-protein ligase HERC4 isoform X2 n=10 Tax=Bombus TaxID=28641 RepID=A0A6P3V6Q4_BOMIM)

HSP 1 Score: 54.3 bits (129), Expect = 2.030e-6
Identity = 30/83 (36.14%), Postives = 43/83 (51.81%), Query Frame = 0
Query:   15 RVECGDLFTLILTSKAELLSCGVGE----CVGGDGTNRKQAELVQSLAGFPTVWMACGNNHSVVIGAGGEAMAFGLNTHGQVG 93
            +V CG    L LT+  EL S G        +G D  +  + +L+ +LAG P  ++ACG  HS+ I   G    +G NT GQ+G
Sbjct:  168 QVACGMKHALALTNNGELYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLG 250          
BLAST of mRNA_D-herbacea_F_contig1.127.1 vs. uniprot
Match: A0A182M4V1_9DIPT (HECT domain-containing protein n=2 Tax=Myzomyia TaxID=59140 RepID=A0A182M4V1_9DIPT)

HSP 1 Score: 53.5 bits (127), Expect = 3.790e-6
Identity = 32/83 (38.55%), Postives = 42/83 (50.60%), Query Frame = 0
Query:   15 RVECGDLFTLILTSKAELLSCGVGEC--VGGDGTNRKQA--ELVQSLAGFPTVWMACGNNHSVVIGAGGEAMAFGLNTHGQVG 93
            ++  G    L LT+  EL + G      +G   TN K     LVQSLAG P  ++ACG NHS  +   G    +G NT GQ+G
Sbjct:  117 QIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTNEKVPIPTLVQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLG 199          
BLAST of mRNA_D-herbacea_F_contig1.127.1 vs. uniprot
Match: A0A182Y317_ANOST (HECT domain-containing protein n=9 Tax=Cellia TaxID=44534 RepID=A0A182Y317_ANOST)

HSP 1 Score: 53.5 bits (127), Expect = 3.790e-6
Identity = 32/83 (38.55%), Postives = 42/83 (50.60%), Query Frame = 0
Query:   15 RVECGDLFTLILTSKAELLSCGVGEC--VGGDGTNRKQA--ELVQSLAGFPTVWMACGNNHSVVIGAGGEAMAFGLNTHGQVG 93
            ++  G    L LT+  EL + G      +G   TN K     LVQSLAG P  ++ACG NHS  +   G    +G NT GQ+G
Sbjct:  146 QIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTNEKVPIPTLVQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLG 228          
BLAST of mRNA_D-herbacea_F_contig1.127.1 vs. uniprot
Match: A0A182FGC0_ANOAL (HECT domain-containing protein n=4 Tax=Nyssorhynchus TaxID=44543 RepID=A0A182FGC0_ANOAL)

HSP 1 Score: 53.5 bits (127), Expect = 3.790e-6
Identity = 32/83 (38.55%), Postives = 43/83 (51.81%), Query Frame = 0
Query:   15 RVECGDLFTLILTSKAELLSCGVGEC--VGGDGTNRKQAE--LVQSLAGFPTVWMACGNNHSVVIGAGGEAMAFGLNTHGQVG 93
            ++  G    L LT+  EL + G      +G   TN K +   LVQSLAG P  ++ACG NHS  +   G    +G NT GQ+G
Sbjct:  146 QIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLG 228          
BLAST of mRNA_D-herbacea_F_contig1.127.1 vs. uniprot
Match: UPI001658BE6B (probable E3 ubiquitin-protein ligase HERC4 isoform X4 n=2 Tax=Anopheles stephensi TaxID=30069 RepID=UPI001658BE6B)

HSP 1 Score: 53.5 bits (127), Expect = 3.850e-6
Identity = 32/83 (38.55%), Postives = 42/83 (50.60%), Query Frame = 0
Query:   15 RVECGDLFTLILTSKAELLSCGVGEC--VGGDGTNRKQA--ELVQSLAGFPTVWMACGNNHSVVIGAGGEAMAFGLNTHGQVG 93
            ++  G    L LT+  EL + G      +G   TN K     LVQSLAG P  ++ACG NHS  +   G    +G NT GQ+G
Sbjct:  825 QIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTNEKVPLPTLVQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLG 907          
BLAST of mRNA_D-herbacea_F_contig1.127.1 vs. uniprot
Match: W5JA25_ANODA (Hect E3 ubiquitin ligase n=3 Tax=Anopheles darlingi TaxID=43151 RepID=W5JA25_ANODA)

HSP 1 Score: 53.5 bits (127), Expect = 3.850e-6
Identity = 32/83 (38.55%), Postives = 43/83 (51.81%), Query Frame = 0
Query:   15 RVECGDLFTLILTSKAELLSCGVGEC--VGGDGTNRKQAE--LVQSLAGFPTVWMACGNNHSVVIGAGGEAMAFGLNTHGQVG 93
            ++  G    L LT+  EL + G      +G   TN K +   LVQSLAG P  ++ACG NHS  +   G    +G NT GQ+G
Sbjct:  824 QIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLG 906          
BLAST of mRNA_D-herbacea_F_contig1.127.1 vs. uniprot
Match: UPI0016410FC4 (probable E3 ubiquitin-protein ligase HERC4 isoform X4 n=2 Tax=Anopheles albimanus TaxID=7167 RepID=UPI0016410FC4)

HSP 1 Score: 53.5 bits (127), Expect = 3.850e-6
Identity = 32/83 (38.55%), Postives = 43/83 (51.81%), Query Frame = 0
Query:   15 RVECGDLFTLILTSKAELLSCGVGEC--VGGDGTNRKQAE--LVQSLAGFPTVWMACGNNHSVVIGAGGEAMAFGLNTHGQVG 93
            ++  G    L LT+  EL + G      +G   TN K +   LVQSLAG P  ++ACG NHS  +   G    +G NT GQ+G
Sbjct:  827 QIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLG 909          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1.127.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A6H5K2Y9_9PHAE6.070e-4280.00HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FWC7_ECTSI5.700e-2779.37HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
UPI000D6247771.090e-634.09LOW QUALITY PROTEIN: probable E3 ubiquitin-protein... [more]
A0A6P3V6Q4_BOMIM2.030e-636.14probable E3 ubiquitin-protein ligase HERC4 isoform... [more]
A0A182M4V1_9DIPT3.790e-638.55HECT domain-containing protein n=2 Tax=Myzomyia Ta... [more]
A0A182Y317_ANOST3.790e-638.55HECT domain-containing protein n=9 Tax=Cellia TaxI... [more]
A0A182FGC0_ANOAL3.790e-638.55HECT domain-containing protein n=4 Tax=Nyssorhynch... [more]
UPI001658BE6B3.850e-638.55probable E3 ubiquitin-protein ligase HERC4 isoform... [more]
W5JA25_ANODA3.850e-638.55Hect E3 ubiquitin ligase n=3 Tax=Anopheles darling... [more]
UPI0016410FC43.850e-638.55probable E3 ubiquitin-protein ligase HERC4 isoform... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13540RCC1_2coord: 66..91
e-value: 1.5E-5
score: 24.6
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 5..94
e-value: 7.3E-15
score: 56.7
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 11..94
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 65..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1contigD-herbacea_F_contig1:3312049..3314074 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1.127.1mRNA_D-herbacea_F_contig1.127.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig1 3312049..3314074 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig1.127.1 ID=prot_D-herbacea_F_contig1.127.1|Name=mRNA_D-herbacea_F_contig1.127.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=95bp
MGAGSDWSSTRKASRVECGDLFTLILTSKAELLSCGVGECVGGDGTNRKQ
AELVQSLAGFPTVWMACGNNHSVVIGAGGEAMAFGLNTHGQVGN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000408Reg_chr_condens
IPR009091RCC1/BLIP-II