prot_D-herbacea_F_contig1.12.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig1.12.1
Unique Nameprot_D-herbacea_F_contig1.12.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length160
Homology
BLAST of mRNA_D-herbacea_F_contig1.12.1 vs. uniprot
Match: A0A6H5L3G3_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3G3_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 2.850e-55
Identity = 94/166 (56.63%), Postives = 119/166 (71.69%), Query Frame = 0
Query:    1 QDALDIVQPGDTITISAGHYFEDLITKVDGTADQRITIRG--GEANSAHVILRGAGTSTRMFEIKHDYYTIESFTIDGKVLDD----ANDENFEDAYRDKPIYVTPDREPTTREGGHLSALDGLIIHDMTIKNAGGECIRLRYFVTNAEIYDNVIETCGLYDFVYD 160
            QDALD+V PGD I +S G Y+EDL T+ DGTAD  ITIRG  G  +  +V+LRGAGTSTR+ EIKHDYY +E FT++G    D    A+ ++ +D +RD  IY   +REPT R GG++SA+DGL+I +M + NAGGECIRLR  VTNAE+Y N I  CG+YDF  D
Sbjct:   34 QDALDVVNPGDVIELSNGDYWEDLKTRTDGTADMPITIRGAGGTGDKENVVLRGAGTSTRVLEIKHDYYIVEDFTVNGHAEGDPDRDADSDSAQDMWRDVLIYAVANREPTERAGGYISAIDGLVIRNMAVTNAGGECIRLRDHVTNAEVYSNHITDCGIYDFRED 199          
BLAST of mRNA_D-herbacea_F_contig1.12.1 vs. uniprot
Match: A0A6H5L8H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8H5_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 3.240e-51
Identity = 92/166 (55.42%), Postives = 118/166 (71.08%), Query Frame = 0
Query:    1 QDALDIVQPGDTITISAGHYFEDLITKVDGTADQRITIRG--GEANSAHVILRGAGTSTRMFEIKHDYYTIESFTIDGKVLDD----ANDENFEDAYRDKPIYVTPDREPTTREGGHLSALDGLIIHDMTIKNAGGECIRLRYFVTNAEIYDNVIETCGLYDFVYD 160
            QDALD+V PGD I +  G Y+EDL T+ DGT D  ITIRG  G  +  +V+LRGAGTSTR+ EIKHDYY +E FT++G   DD    A+ ++ ED +RD  IY   +REPT R+GG++SA+DGL+I +M + NAGGECIRLR  VT AE+Y N I  CG+YD+  D
Sbjct:   40 QDALDVVNPGDVIELGNGDYWEDLKTRTDGTVDMPITIRGAGGTDDRENVVLRGAGTSTRVLEIKHDYYIVEDFTVNGDAEDDPDRDADSDSPEDMWRDVLIYAVANREPTERDGGYVSAIDGLVIRNMAVTNAGGECIRLRDHVTYAEVYSNYIIDCGIYDYRED 205          
BLAST of mRNA_D-herbacea_F_contig1.12.1 vs. uniprot
Match: A0A6H5JYT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYT7_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 4.840e-51
Identity = 92/166 (55.42%), Postives = 118/166 (71.08%), Query Frame = 0
Query:    1 QDALDIVQPGDTITISAGHYFEDLITKVDGTADQRITIRG--GEANSAHVILRGAGTSTRMFEIKHDYYTIESFTIDGKVLDD----ANDENFEDAYRDKPIYVTPDREPTTREGGHLSALDGLIIHDMTIKNAGGECIRLRYFVTNAEIYDNVIETCGLYDFVYD 160
            QDALD+V PGD I +  G Y+EDL T+ DGT D  ITIRG  G  +  +V+LRGAGTSTR+ EIKHDYY +E FT++G   DD    A+ ++ ED +RD  IY   +REPT R+GG++SA+DGL+I +M + NAGGECIRLR  VT AE+Y N I  CG++DF  D
Sbjct:   39 QDALDVVNPGDVIELGNGDYWEDLKTRTDGTVDMPITIRGAGGTDDRENVVLRGAGTSTRVLEIKHDYYIVEDFTVNGDAEDDPDRDADSDSPEDMWRDVLIYAVANREPTERDGGYVSAIDGLVIRNMAVTNAGGECIRLRDHVTYAEVYSNHITDCGIFDFRED 204          
BLAST of mRNA_D-herbacea_F_contig1.12.1 vs. uniprot
Match: D7FIS4_ECTSI (Putative nosD copper-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS4_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 4.660e-44
Identity = 83/158 (52.53%), Postives = 109/158 (68.99%), Query Frame = 0
Query:    1 QDALDIVQPGDTITISAGHYFEDLITKVDGTADQRITIRG--GEANSAHVILRGAGTSTRMFEIKHDYYTIESFTIDGKVLDDAN----DENFEDAYRDKPIYVTPDREPTTREGGHLSALDGLIIHDMTIKNAGGECIRLRYFVTNAEIYDNVIETC 152
            +DALD V PGD I +  G Y+EDL T+ DGTAD  ITIRG  G  +  +V+LRG GTS+R+ EIKHDYY IE FT+DG   DD N     ++ ED +RD  IY   DREPT R+GG++S LDGL+I +M + NAGGECIRLR   T+++ +++  + C
Sbjct:   17 KDALDEVNPGDVIELGHGDYWEDLKTRTDGTADMPITIRGAAGTDDRENVVLRGDGTSSRVLEIKHDYYIIEDFTVDGDAEDDPNRNSDSDSAEDMWRDILIYAIADREPTERDGGYVSTLDGLVIRNMKLANAGGECIRLRDVGTSSDQWEDGPDVC 174          
BLAST of mRNA_D-herbacea_F_contig1.12.1 vs. uniprot
Match: A0A7V4PDA4_9BACT (Beta_helix domain-containing protein n=1 Tax=Candidatus Moranbacteria bacterium TaxID=2045217 RepID=A0A7V4PDA4_9BACT)

HSP 1 Score: 127 bits (320), Expect = 3.030e-32
Identity = 68/160 (42.50%), Postives = 99/160 (61.88%), Query Frame = 0
Query:    1 QDALDIVQPGDTITISAGHYFEDLITKVDGTADQRITIRGGEANSAHVILRGAGTSTRMFEIKHDYYTIESFTIDGKVLDDANDENFEDAYRDKPIYVTPDREPTTREGGHLSALDGLIIHDMTIKNAGGECIRLRYFVTNAEIYDNVIETCGLYDFVYD 160
            QDA+D  QPGD + +  G YF+D ++  +G  ++ ITI G    S+  +++G+G ++R+ EI HDY  ++ F++DG   D ++ +N    YRDK IYV    +           + GL I +MTIKNAGGECIRLRYF    EI  NVI+ CG+YDF++D
Sbjct:   94 QDAVDKAQPGDGVMLLEGEYFQDFVSARNGLKEKPITIYG----SSKAVIKGSGKNSRIIEINHDYIFLKGFSVDGLSGDASDKKN----YRDKLIYVQGKEKN--------KGVTGLQIKEMTIKNAGGECIRLRYFAQENEISHNVIKNCGVYDFLFD 237          
BLAST of mRNA_D-herbacea_F_contig1.12.1 vs. uniprot
Match: UPI001998BEE9 (Right-handed parallel beta-helix repeat-containing protein n=1 Tax=Roseiflexaceae bacterium TaxID=2762507 RepID=UPI001998BEE9)

HSP 1 Score: 122 bits (305), Expect = 2.600e-30
Identity = 66/157 (42.04%), Postives = 95/157 (60.51%), Query Frame = 0
Query:    1 QDALDIVQPGDTITISAGHYFEDLITKVDGTADQRITIRGGEANSAHVILRGAGTSTRMFEIKHDYYTIESFTIDGKVLDDANDENFEDAYRDKPIYVTPDREPTTREGGHLSALDGLIIHDMTIKNAGGECIRLRYFVTNAEIYDNVIETCGLYDF 157
            Q A+D+ QPGD+IT+++G Y +D+++K +G+    ITI G     A  I++GAG   R+ E++HDY T + FTIDG       + N  D+YRDK +YV  D          L  + GL + +MT +N GGEC+RLRYFV N+EI  +    CG+ DF
Sbjct:   41 QKAVDLAQPGDSITLASGEYLQDVVSKRNGSPSAPITISG----PADAIVKGAGNG-RIVEVRHDYLTFDGFTIDGLY----GNPNSSDSYRDKLLYVIGDAP--------LDGVSGLKVLNMTFRNGGGECLRLRYFVQNSEIAQSTFLNCGVRDF 180          
BLAST of mRNA_D-herbacea_F_contig1.12.1 vs. uniprot
Match: Q8QKV2_ESV1K (EsV-1-164 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QKV2_ESV1K)

HSP 1 Score: 125 bits (313), Expect = 2.850e-30
Identity = 73/164 (44.51%), Postives = 97/164 (59.15%), Query Frame = 0
Query:    1 QDALDIVQPGDTITISAGHYFEDLITKVDGTADQRITIRGGEANSAHVILRGAGTSTRMFEIKHDYYTIESFTIDGKVLDDANDENFEDAYRDKPIYVTPDREPTTREGGHL-----SALDGLIIHDMTIKNAGGECIRLRYFVTNAEIYDNVIETCGLYDFVY 159
            Q AL++ QPGDTI +  G Y EDL T  DG  D+RI I G    S   +LRG G   R+F++ H Y T++ FTIDG +  + + E     Y+D  IY+T  RE  TRE         SA DG+II +M ++ A GEC+R RYFV+N EI+   I  CG+ DFV+
Sbjct:   28 QAALELAQPGDTIELKDGEYREDLTTVRDGEPDKRIIITG----SRDAVLRGGGKEARLFQVMHSYITLDGFTIDGLLSGNGDAET---DYQDMLIYITAHRE--TREIEQYGTKFRSAQDGVIISNMKLERALGECVRARYFVSNLEIFGCEIADCGIGDFVF 182          
BLAST of mRNA_D-herbacea_F_contig1.12.1 vs. uniprot
Match: A0A1F6HQF6_9BACT (DUF1565 domain-containing protein n=1 Tax=Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_40_10 TaxID=1798593 RepID=A0A1F6HQF6_9BACT)

HSP 1 Score: 119 bits (297), Expect = 2.590e-29
Identity = 70/159 (44.03%), Postives = 98/159 (61.64%), Query Frame = 0
Query:    1 QDALDIVQPGDTITISAGHYFEDLITKVDGTADQRITIRGGEANSAHVILRGAGTSTRMFEIKHDYYTIESFTIDGKVLDDANDENFEDAYRDKPIYVTPDREPTTREGGHLSALDGLIIHDMTIKNAGGECIRLRYFVTNAEIYDNVIETCGLYDFVY 159
            Q A+D   PGD+IT+++G Y +D+ITK +GT D  I IRG    S + +L+G   +TR+FEI H+Y T++ F+IDG       D N    +RDK +YV   +    + G     + GL + +MT KNAGGECIRLRYF  N EI ++ I  CG+Y FV+
Sbjct:   36 QKAVDKALPGDSITLASGVYRQDVITKRNGTQDLPIIIRG----SKNAVLKG-NKNTRIFEINHNYITLDGFSIDGLY----GDLNRRSGFRDKLLYV---QGKEAKNG-----VTGLKVQNMTFKNAGGECIRLRYFAHNNEISNSTISNCGVYYFVF 177          
BLAST of mRNA_D-herbacea_F_contig1.12.1 vs. uniprot
Match: A0A4R0K2W0_9ACTN (DUF1565 domain-containing protein n=2 Tax=Kribbella TaxID=182639 RepID=A0A4R0K2W0_9ACTN)

HSP 1 Score: 118 bits (296), Expect = 4.170e-29
Identity = 69/160 (43.12%), Postives = 94/160 (58.75%), Query Frame = 0
Query:    1 QDALDIVQPGDTITISAGHYFEDLITKVDGTADQRITIRGGEANSAHVILRGAGTSTRMFEIKHDYYTIESFTIDGKVLDDANDENFEDAYRDKPIYVTPDREPTTREGGHLSALDGLIIHDMTIKNAGGECIRLRYFVTNAEIYDNVIETCGLYDFVYD 160
            Q ALD    G T+ +++G Y +D +TK  G     +T+ G        ++ GAG S R+F+I+HD  T++ FTIDG         + E  YRDK IYV      TT   G    + GL I DMT+KNAGGEC+RLRY +TNA+++DN I  CG+YDF +D
Sbjct:   50 QKALDTAPRGATVHLASGTYLQDAVTKRSG-----VTVTGPST----AVVEGAGNS-RIFQIQHDRVTLDGFTIDGL----HGSSSSESGYRDKLIYVMS----TTAGDG----VGGLTIRDMTLKNAGGECMRLRYLITNADVHDNTIGPCGVYDFKFD 187          
BLAST of mRNA_D-herbacea_F_contig1.12.1 vs. uniprot
Match: A0A536BA28_9CHLR (DNRLRE domain-containing protein n=2 Tax=Bacteria TaxID=2 RepID=A0A536BA28_9CHLR)

HSP 1 Score: 121 bits (304), Expect = 4.430e-29
Identity = 69/159 (43.40%), Postives = 98/159 (61.64%), Query Frame = 0
Query:    1 QDALDIVQPGDTITISAGHYFEDLITKVDGTADQRITIRGGEANSAHVILRGAGTSTRMFEIKHDYYTIESFTIDGKVLDDANDENFEDAYRDKPIYVTPDREPTTREGGHLSALDGLIIHDMTIKNAGGECIRLRYFVTNAEIYDNVIETCGLYDFVY 159
            Q A+D+ QPGDT+ +++G Y +D+++K +GTA+ RITI G     A  +++G G   R+ EI HD+ T++ FTIDG       + +    YRDK +YV   +EP        + +D L I  MTI  +GGECIRLRYF TNAEI  N I  CG+ DF++
Sbjct:   86 QKAVDLAQPGDTVNLTSGTYLQDVVSKRNGTANGRITITG----PATAVVKGGGAD-RIIEINHDHITLDGFTIDGL----WGNPSAASGYRDKTLYVLG-KEPR-------AGVDHLHITKMTILRSGGECIRLRYFATNAEIDHNTITHCGIIDFLF 227          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L3G3_9PHAE2.850e-5556.63Beta_helix domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5L8H5_9PHAE3.240e-5155.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYT7_9PHAE4.840e-5155.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIS4_ECTSI4.660e-4452.53Putative nosD copper-binding protein n=1 Tax=Ectoc... [more]
A0A7V4PDA4_9BACT3.030e-3242.50Beta_helix domain-containing protein n=1 Tax=Candi... [more]
UPI001998BEE92.600e-3042.04Right-handed parallel beta-helix repeat-containing... [more]
Q8QKV2_ESV1K2.850e-3044.51EsV-1-164 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
A0A1F6HQF6_9BACT2.590e-2944.03DUF1565 domain-containing protein n=1 Tax=Candidat... [more]
A0A4R0K2W0_9ACTN4.170e-2943.13DUF1565 domain-containing protein n=2 Tax=Kribbell... [more]
A0A536BA28_9CHLR4.430e-2943.40DNRLRE domain-containing protein n=2 Tax=Bacteria ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..159
e-value: 4.1E-18
score: 67.8
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 1..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1contigD-herbacea_F_contig1:492256..504449 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1.12.1mRNA_D-herbacea_F_contig1.12.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig1 492256..504449 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig1.12.1 ID=prot_D-herbacea_F_contig1.12.1|Name=mRNA_D-herbacea_F_contig1.12.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=160bp
QDALDIVQPGDTITISAGHYFEDLITKVDGTADQRITIRGGEANSAHVIL
RGAGTSTRMFEIKHDYYTIESFTIDGKVLDDANDENFEDAYRDKPIYVTP
DREPTTREGGHLSALDGLIIHDMTIKNAGGECIRLRYFVTNAEIYDNVIE
TCGLYDFVYD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence
IPR012334Pectin_lyas_fold