prot_D-herbacea_F_contig1.106.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig1.106.1
Unique Nameprot_D-herbacea_F_contig1.106.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length240
Homology
BLAST of mRNA_D-herbacea_F_contig1.106.1 vs. uniprot
Match: D7FUB3_ECTSI (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUB3_ECTSI)

HSP 1 Score: 290 bits (741), Expect = 9.210e-97
Identity = 141/181 (77.90%), Postives = 158/181 (87.29%), Query Frame = 0
Query:   60 DAAEAASGMETITLAAGCFWCVEAVYQRVVGVSSVESGYMGGSVNNPSYGQICTGSTGHAEAIQLQYDPTKVSATELLEIFFKMHDPTTKNRQGADVGTQYRSAIFCHSEEQKRAANEVIAAVQTKFARPIVTEVADASEWYPADKGHQDYYRRNKSNNPYCKLVIHPKLSKVRNEAFTLP 240
            +A+  A+G+ETITL AGCFWCVEAVYQRVVGV SVESGYMGG VNNPSYGQICTG TGHAE IQL+Y P+KVS T+LLEIFFKMHDPTTKNRQGADVGTQYRSAIF HSEEQK+AA EVIAAVQ KF   IVTEV  AS+++ ADKGHQDYY RNKS+N YC+LVIHPKLSKV+++ +  P
Sbjct:    3 EASSTAAGLETITLGAGCFWCVEAVYQRVVGVESVESGYMGGIVNNPSYGQICTGETGHAEVIQLKYKPSKVSPTDLLEIFFKMHDPTTKNRQGADVGTQYRSAIFYHSEEQKQAAEEVIAAVQPKFGSKIVTEVTAASDFFVADKGHQDYYSRNKSSNGYCRLVIHPKLSKVKHDKYKSP 183          
BLAST of mRNA_D-herbacea_F_contig1.106.1 vs. uniprot
Match: A0A840V7S4_9BACT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Haloferula luteola TaxID=595692 RepID=A0A840V7S4_9BACT)

HSP 1 Score: 218 bits (555), Expect = 2.220e-68
Identity = 100/167 (59.88%), Postives = 126/167 (75.45%), Query Frame = 0
Query:   69 ETITLAAGCFWCVEAVYQRVVGVSSVESGYMGGSVNNPSYGQICTGSTGHAEAIQLQYDPTKVSATELLEIFFKMHDPTTKNRQGADVGTQYRSAIFCHSEEQKRAANEVIAAVQTKFARPIVTEVADASEWYPADKGHQDYYRRNKSNNPYCKLVIHPKLSKVRNE 235
            E ITL AGCFWCVEAV+ ++ GV S  SGYMGG+  +P+Y Q+CTG TGHAE +Q+ +DP K SA  +L+ F+++HDPTT NRQGADVGTQYRSAIF HSEEQK+ A     A Q +F  PIVTE+  AS +YPA+  HQD+Y +NK+ NPYC+ VI PKL K++ E
Sbjct:   37 EVITLGAGCFWCVEAVFAQIEGVQSATSGYMGGTTESPTYQQVCTGETGHAEVVQIVFDPAKTSAARILDWFWELHDPTTLNRQGADVGTQYRSAIFYHSEEQKKVAEASKEAAQKEFTDPIVTEITPASTFYPAENYHQDFYFQNKTKNPYCRAVIEPKLRKLKLE 203          
BLAST of mRNA_D-herbacea_F_contig1.106.1 vs. uniprot
Match: A0A2A2Y5N2_9BACT (Peptide methionine sulfoxide reductase MsrA n=3 Tax=Verrucomicrobiae TaxID=203494 RepID=A0A2A2Y5N2_9BACT)

HSP 1 Score: 213 bits (542), Expect = 2.280e-66
Identity = 97/169 (57.40%), Postives = 128/169 (75.74%), Query Frame = 0
Query:   67 GMETITLAAGCFWCVEAVYQRVVGVSSVESGYMGGSVNNPSYGQICTGSTGHAEAIQLQYDPTKVSATELLEIFFKMHDPTTKNRQGADVGTQYRSAIFCHSEEQKRAANEVIAAVQTKFARPIVTEVADASEWYPADKGHQDYYRRNKSNNPYCKLVIHPKLSKVRNE 235
            G E +TL AGCFWC+EA Y+++ GV S  SGYMGG++ NP+Y QIC G+TGHAE +Q+ YDP K S  ++L  F+++HDPTT NRQGADVGTQYRSAIF H+E QK+ A     A +  F  PIVTE+ +++ +YPA+K HQD+Y++NKS NPYC+ VI PKL K++ E
Sbjct:   38 GAEVLTLGAGCFWCIEAAYRQLDGVYSATSGYMGGTLANPTYEQICNGTTGHAEVVQVVYDPKKTSTEKVLSWFWELHDPTTLNRQGADVGTQYRSAIFYHNEGQKKVAEASKTAAKELFKSPIVTEITESATFYPAEKYHQDFYQQNKSKNPYCRAVITPKLKKLKLE 206          
BLAST of mRNA_D-herbacea_F_contig1.106.1 vs. uniprot
Match: A0A1M6J340_9BACT (Peptide methionine sulfoxide reductase MsrA n=2 Tax=Rubritalea squalenifaciens TaxID=407226 RepID=A0A1M6J340_9BACT)

HSP 1 Score: 213 bits (542), Expect = 3.250e-66
Identity = 101/173 (58.38%), Postives = 125/173 (72.25%), Query Frame = 0
Query:   63 EAASGMETITLAAGCFWCVEAVYQRVVGVSSVESGYMGGSVNNPSYGQICTGSTGHAEAIQLQYDPTKVSATELLEIFFKMHDPTTKNRQGADVGTQYRSAIFCHSEEQKRAANEVIAAVQTKFARPIVTEVADASEWYPADKGHQDYYRRNKSNNPYCKLVIHPKLSKVRNE 235
            E   G E ITL AGCFWCVEAVY R+ GV S  SGYMGG   NP+Y +ICTGSTGHAE + + YDP K+S  E+L  F+++HDPTT NRQG DVGTQYRSAI+ +S++QK  A + +   Q  F   IVTE+  ASE YPA+  HQDYYR NK++N YC+LVI PK+ K++ E
Sbjct:   39 EVPEGFEQITLGAGCFWCVEAVYNRIDGVKSAVSGYMGGKTKNPTYEEICTGSTGHAEVVHVTYDPKKISTEEILAWFWQLHDPTTLNRQGNDVGTQYRSAIYYYSDKQKDVAEKSLKEAQKNFKDKIVTEITKASELYPAEVYHQDYYRLNKNSNGYCRLVIAPKMKKLKLE 211          
BLAST of mRNA_D-herbacea_F_contig1.106.1 vs. uniprot
Match: A0A4Q5TTQ6_9BACT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=A0A4Q5TTQ6_9BACT)

HSP 1 Score: 211 bits (538), Expect = 1.010e-65
Identity = 100/169 (59.17%), Postives = 122/169 (72.19%), Query Frame = 0
Query:   67 GMETITLAAGCFWCVEAVYQRVVGVSSVESGYMGGSVNNPSYGQICTGSTGHAEAIQLQYDPTKVSATELLEIFFKMHDPTTKNRQGADVGTQYRSAIFCHSEEQKRAANEVIAAVQTKFARPIVTEVADASEWYPADKGHQDYYRRNKSNNPYCKLVIHPKLSKVRNE 235
            GME  TL AGCFWC EAVYQ++ GV SV SGY GG V  P+Y +ICTG+TGHAE I + +DP K++   +L  F+ +HDPTT NRQG DVGTQYRSAI+ HS+EQK+ A     A Q  F +PIVTE+  A E+YPA+  HQ+YY  NKS NPYCK VI PKL K++ E
Sbjct:   41 GMEAATLGAGCFWCTEAVYQKLDGVISVTSGYTGGKVEKPTYEEICTGATGHAEVIVVVFDPKKIAYERVLAWFWDLHDPTTLNRQGNDVGTQYRSAIYYHSDEQKKIAEASKKAAQANFDKPIVTEITKAPEFYPAENYHQNYYAENKSKNPYCKAVIEPKLKKLKLE 209          
BLAST of mRNA_D-herbacea_F_contig1.106.1 vs. uniprot
Match: UPI001B8B6857 (Peptide-methionine (S)-S-oxide reductase MsrA n=2 Tax=Luteolibacter ambystomatis TaxID=2824561 RepID=UPI001B8B6857)

HSP 1 Score: 211 bits (537), Expect = 1.390e-65
Identity = 97/167 (58.08%), Postives = 126/167 (75.45%), Query Frame = 0
Query:   67 GMETITLAAGCFWCVEAVYQRVVGVSSVESGYMGGSVNNPSYGQICTGSTGHAEAIQLQYDPTKVSATELLEIFFKMHDPTTKNRQGADVGTQYRSAIFCHSEEQKRAANEVIAAVQTKFARPIVTEVADASEWYPADKGHQDYYRRNKSNNPYCKLVIHPKLSKVR 233
            G E +TL AGCFWCVEAV++++ GV+SV SGYMGG V NP+Y Q+C  +TGHAE +Q+ YDP KVS  ++L+ F+K+HDPTT NRQG DVGTQYRSAIF H++ QK AA     A Q  F  PIVTE+  A +++PA+  HQDYY +NK+ N YC++VI PKL K++
Sbjct:   40 GDEVVTLGAGCFWCVEAVFKQIDGVASVTSGYMGGKVKNPTYQQVCEENTGHAEVVQIVYDPKKVSLEKILDWFWKLHDPTTLNRQGNDVGTQYRSAIFYHTDAQKTAAEAAKKAAQKDFTDPIVTEITKAGDFWPAENYHQDYYFQNKNKNGYCRVVIEPKLKKLK 206          
BLAST of mRNA_D-herbacea_F_contig1.106.1 vs. uniprot
Match: A5GET7_GEOUR (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Geotalea uraniireducens (strain Rf4) TaxID=351605 RepID=A5GET7_GEOUR)

HSP 1 Score: 209 bits (531), Expect = 4.710e-65
Identity = 95/167 (56.89%), Postives = 127/167 (76.05%), Query Frame = 0
Query:   69 ETITLAAGCFWCVEAVYQRVVGVSSVESGYMGGSVNNPSYGQICTGSTGHAEAIQLQYDPTKVSATELLEIFFKMHDPTTKNRQGADVGTQYRSAIFCHSEEQKRAANEVIAAVQTKFARPIVTEVADASEWYPADKGHQDYYRRNKSNNPYCKLVIHPKLSKVRNE 235
            ET TLAAGCFWCVEA+++R+ GV  V SGY GG V NP+Y ++C+G+TGHAEAIQ+ +DP  +S  ELL++F++ HDPTT++RQGADVG+QYRSAIFCH E Q++ A    A  +T +  PIVTE+     +YPA+  HQDYYR N+ N PYC+LVI PK+ K++ +
Sbjct:    6 ETATLAAGCFWCVEALFKRLEGVERVASGYAGGEVANPTYEEVCSGTTGHAEAIQITFDPEVISFEELLQVFWRSHDPTTRDRQGADVGSQYRSAIFCHDERQRQLAERSRAEAETLWIEPIVTEIVPFKNFYPAEGYHQDYYRLNR-NQPYCRLVIDPKIQKLQKD 171          
BLAST of mRNA_D-herbacea_F_contig1.106.1 vs. uniprot
Match: UPI0015A409FB (peptide-methionine (S)-S-oxide reductase MsrA n=1 Tax=Parasphingopyxis sp. CP4 TaxID=2724527 RepID=UPI0015A409FB)

HSP 1 Score: 208 bits (530), Expect = 6.470e-65
Identity = 96/165 (58.18%), Postives = 120/165 (72.73%), Query Frame = 0
Query:   69 ETITLAAGCFWCVEAVYQRVVGVSSVESGYMGGSVNNPSYGQICTGSTGHAEAIQLQYDPTKVSATELLEIFFKMHDPTTKNRQGADVGTQYRSAIFCHSEEQKRAANEVIAAVQTKFARPIVTEVADASEWYPADKGHQDYYRRNKSNNPYCKLVIHPKLSKVR 233
            E  TLA GCFWC EAVY  VVGV++VESGY+GG   NP Y  +C+G+TGHAEA++L +D  ++S  +LL+IFF +HDPT  NRQG DVGTQYRSAIF HS EQ++ A + I A  +++  PIVT +   SEWYPA+K HQDY+ R  S NPYC  V+ PKL K R
Sbjct:    4 EQATLAGGCFWCTEAVYNDVVGVTNVESGYIGGETTNPDYRSVCSGNTGHAEAVRLTFDSDQISYADLLDIFFHIHDPTQLNRQGNDVGTQYRSAIFPHSPEQEQLAQQAIKAADSEWPDPIVTTIEPFSEWYPAEKYHQDYFEREGSRNPYCMAVVAPKLQKFR 168          
BLAST of mRNA_D-herbacea_F_contig1.106.1 vs. uniprot
Match: UPI0005561C17 (peptide-methionine (S)-S-oxide reductase MsrA n=1 Tax=Hugenholtzia roseola TaxID=1002 RepID=UPI0005561C17)

HSP 1 Score: 208 bits (530), Expect = 7.370e-65
Identity = 98/168 (58.33%), Postives = 127/168 (75.60%), Query Frame = 0
Query:   68 METITLAAGCFWCVEAVYQRVVGVSSVESGYMGGSVNNPSYGQICTGSTGHAEAIQLQYDPTKVSATELLEIFFKMHDPTTKNRQGADVGTQYRSAIFCHSEEQKRAANEVIAAVQTK--FARPIVTEVADASEWYPADKGHQDYYRRNKSNNPYCKLVIHPKLSKVR 233
            ++T+TL AGCFWCVEAV+QRV G+  V SGYMGGS+ NP+Y +ICTG TGHAE +QL Y+PTK+S  E+L IFF  HDPTT NRQGADVGTQYRSAIF HS+ Q + A +++A ++ +  F  PIVTE+  A+ +Y A+  HQ+YY  N+S  PYC  VI PK+ K++
Sbjct:   10 LDTLTLGAGCFWCVEAVFQRVEGIEKVVSGYMGGSLKNPTYREICTGRTGHAEVVQLFYNPTKISVAEILAIFFGTHDPTTLNRQGADVGTQYRSAIFYHSQAQAQTATQIVAELEKEKIFPDPIVTEITPAAAFYKAEDYHQNYYNENQSQ-PYCNFVITPKIEKLK 176          
BLAST of mRNA_D-herbacea_F_contig1.106.1 vs. uniprot
Match: A0A7V7ZKK9_9CHLR (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Chloroflexia bacterium SDU3-3 TaxID=2651839 RepID=A0A7V7ZKK9_9CHLR)

HSP 1 Score: 208 bits (529), Expect = 8.880e-65
Identity = 100/169 (59.17%), Postives = 125/169 (73.96%), Query Frame = 0
Query:   67 GMETITLAAGCFWCVEAVYQRVVGVSSVESGYMGGSVNNPSYGQICTGSTGHAEAIQLQYDPTKVSATELLEIFFKMHDPTTKNRQGADVGTQYRSAIFCHSEEQKRAANEVIAAV--QTKFARPIVTEVADASEWYPADKGHQDYYRRNKSNNPYCKLVIHPKLSKVR 233
            G E  TLA GCFWC+EA+Y  ++GV+ V SGY GGSV NPSY Q+CTG TGHAE +QL++DP ++S  ELL +FF +HDPTT NRQG DVGTQYRSAIF HS EQ+R A EVIA +  Q  FA+PIVT+V    ++Y A+  HQ+Y+  N  N PYC+ V+ PK+SK R
Sbjct:    4 GTEIATLAGGCFWCLEAIYDDIIGVTDVVSGYAGGSVPNPSYEQVCTGGTGHAEVVQLRFDPQQISFRELLGVFFSIHDPTTLNRQGHDVGTQYRSAIFFHSPEQQRVAQEVIAELTEQRAFAQPIVTQVVPFEQFYAAEGYHQEYFANN-PNQPYCRAVVAPKVSKFR 171          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1.106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUB3_ECTSI9.210e-9777.90Peptide-methionine (S)-S-oxide reductase n=2 Tax=E... [more]
A0A840V7S4_9BACT2.220e-6859.88Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
A0A2A2Y5N2_9BACT2.280e-6657.40Peptide methionine sulfoxide reductase MsrA n=3 Ta... [more]
A0A1M6J340_9BACT3.250e-6658.38Peptide methionine sulfoxide reductase MsrA n=2 Ta... [more]
A0A4Q5TTQ6_9BACT1.010e-6559.17Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
UPI001B8B68571.390e-6558.08Peptide-methionine (S)-S-oxide reductase MsrA n=2 ... [more]
A5GET7_GEOUR4.710e-6556.89Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
UPI0015A409FB6.470e-6558.18peptide-methionine (S)-S-oxide reductase MsrA n=1 ... [more]
UPI0005561C177.370e-6558.33peptide-methionine (S)-S-oxide reductase MsrA n=1 ... [more]
A0A7V7ZKK9_9CHLR8.880e-6559.17Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036509Peptide methionine sulphoxide reductase MsrA superfamilyGENE3D3.30.1060.10coord: 34..230
e-value: 7.5E-71
score: 239.7
IPR036509Peptide methionine sulphoxide reductase MsrA superfamilySUPERFAMILY55068Peptide methionine sulfoxide reductasecoord: 45..232
IPR002569Peptide methionine sulphoxide reductase MsrATIGRFAMTIGR00401TIGR00401coord: 69..216
e-value: 9.3E-57
score: 189.7
IPR002569Peptide methionine sulphoxide reductase MsrAPFAMPF01625PMSRcoord: 70..221
e-value: 1.1E-62
score: 210.7
IPR002569Peptide methionine sulphoxide reductase MsrAHAMAPMF_01401MsrAcoord: 68..225
score: 34.299
NoneNo IPR availablePANTHERPTHR43774FAMILY NOT NAMEDcoord: 45..235

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1contigD-herbacea_F_contig1:2735533..2741349 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1.106.1mRNA_D-herbacea_F_contig1.106.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig1 2735533..2741349 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig1.106.1 ID=prot_D-herbacea_F_contig1.106.1|Name=mRNA_D-herbacea_F_contig1.106.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=240bp
HPLSTHIITSPLQPCYHSVTSAALHQCKLNTPSERSLFYLTTQRQSSTSV
IMAAMASSSDAAEAASGMETITLAAGCFWCVEAVYQRVVGVSSVESGYMG
GSVNNPSYGQICTGSTGHAEAIQLQYDPTKVSATELLEIFFKMHDPTTKN
RQGADVGTQYRSAIFCHSEEQKRAANEVIAAVQTKFARPIVTEVADASEW
YPADKGHQDYYRRNKSNNPYCKLVIHPKLSKVRNEAFTLP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002569Met_Sox_Rdtase_MsrA
IPR036509Met_Sox_Rdtase_MsrA_sf