mRNA_D-herbacea_F_contig1190.1352.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig1190.1352.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN) HSP 1 Score: 410 bits (1054), Expect = 2.880e-125 Identity = 219/448 (48.88%), Postives = 299/448 (66.74%), Query Frame = 1
Query: 10 GPSGLRYSHLQAALCDELVEDLAAFATLVFSSRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDSGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPEISLDIAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAASYDALVEWALASIIAGD---GAAAAGLPTPAEA------------LRQAHLPIREGGLGLTSSSSIKGAAYIGCHALVLGRVVAASARGNL 1308
GPSGLR+S LQ++L EL E +A +++F LP FW LHTSANLSA+G K RP+A GD+ RR++G V CR+YG LA++F+P GQYGVAV GG E++A A L ++G +L+YD NAFNS+ R LPALA+++P ++PYA+N+YAREPPKLL+ DSG + V+ SA GVQQGCNLGPLCYSAG LK+L++FRANPPV GA+ ++FIDD+ V+LP + + AA VT W+Q + G++LNR KS+ L G + E+ R ++ T L V GMR+VGVPVG + + + GEP +L++ +A ++DAQAS QILR SA +RL+ LLR++PP +T +AA+ +D VE L +I+ G G A PT + +RQA LP+REGGLG+ S+ I G A+IG ALVL R + A+ NL
Sbjct: 1177 GPSGLRFSLLQSSLTPELCEAIAKLCSVIFDGSHLPDSFWQLHTSANLSAIGDKCRPIAVGDLFRRIVGGVICRQYGPSLAEHFEPQGQYGVAVPGGTELLAARAFLAHQKGQCLLAYDARNAFNSMKRSAILPALADLIPPMLPYATNIYAREPPKLLYKTDSGMA-VIPSATGVQQGCNLGPLCYSAGLLKLLRDFRANPPVVGAQLMAFIDDLVVLLPKNHACNPAAAEAVTTWIQANMQPLGVALNRSKSKILFPPGTDVKSWPEKDRETLERTQLAVAEGGMRIVGVPVGEPDYIKRSALDIARGEPTDLLKEIASLDDAQASLQILRFSAATRLNFLLRSLPPDLTKEAASEFDKSVEQTLETILNGPSQPGEHAPHEPTEENSPSLPRLNLSPVGIRQARLPVREGGLGIPSTVDISGPAFIGGQALVLARALVATNATNL 1623
BLAST of mRNA_D-herbacea_F_contig1190.1352.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE) HSP 1 Score: 384 bits (986), Expect = 1.280e-124 Identity = 215/444 (48.42%), Postives = 281/444 (63.29%), Query Frame = 1
Query: 1 SAAGPSGLRYSHLQAA-LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDSGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPEISLDIAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAASYDALVEWALASIIAGDGAAAAGLPTPAE----------------ALRQAHLPIREGGLGLTSSSSIKGAAYIGCHALVLGR 1278
SA GP GLR+S+LQA + D E LA F+ VF LP FW LHTSANLSALG+K RP+A G VLRR+I FC +Y +A+ F+ Q+G V GGVEI+A TA L ++G TILS+DG NA+NS+ R LPA+A P +V Y N+YAR KLLF ++ G EVV S RGVQQGCNLG + G L I+KEF PPVPGA+ + ++DD+ V LPP ++ +I AI VT W+Q+ L +GI L+ KS+ L +G+ LT +++ + TGL+V GM +VGVPVGTE FQR F+ G PAEL+R L+ ++D QAS+Q+LRLS RL HLLRT+ PSIT AA +D L+ WA++ I+ G A G+PT E A Q HLPIREGGLG+TSS I+ +A++ ALV +
Sbjct: 136 SAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCHQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAFVAGQALVFSK 579
BLAST of mRNA_D-herbacea_F_contig1190.1352.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE) HSP 1 Score: 387 bits (994), Expect = 3.720e-123 Identity = 216/462 (46.75%), Postives = 290/462 (62.77%), Query Frame = 1
Query: 1 SAAGPSGLRYSHLQAA-LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDSGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPEISLDIAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAASYDALVEWALASIIAGDGAAAAGLPTPAE-----------------ALRQAHLPIREGGLGLTSSSSIKGAAYIGCHALVLGRVVAASARGNLPSLLERL 1329
SA GP GLR+S+LQA + D E LA F+ VF LP FW LHTSANLSALG+K RP+A G VLRR+I FCR+Y +A+ F+ Q+G V GGVEI+A TA L ++G TILS+DG NA+NS+ R LPA+A P +V Y N+YAR KLLF ++ G EVV S RGVQQGCNLG + G L I+KEF PPVPG + + ++DD+ LPP ++ ++ AI VT W+QERL +GI L+ KS+ L +G+ LT +++ + GL+V GM VVG+PVGTE+FQR+F+ + G+PAEL+ LA ++D QAS+Q+LRLS RL HLLRT+ PSIT AA +D ++ WA++ I+ G A + +PT E A Q HLP+REGGLG+TS+ I+ +A++ ALV + V AS + L RL
Sbjct: 136 SAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVTEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAFVAGQALVFSKSVQASTGYTVEQCLPRL 597
BLAST of mRNA_D-herbacea_F_contig1190.1352.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE) HSP 1 Score: 388 bits (997), Expect = 2.310e-121 Identity = 216/462 (46.75%), Postives = 290/462 (62.77%), Query Frame = 1
Query: 1 SAAGPSGLRYSHLQAA-LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDSGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPEISLDIAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAASYDALVEWALASIIAGDGAAAAGLPTPAE-----------------ALRQAHLPIREGGLGLTSSSSIKGAAYIGCHALVLGRVVAASARGNLPSLLERL 1329
SA GP GLR+S+LQA + D E LA F+ VF LP FW LHTSANLSALG+K RP+A G VLRR+I FCR+Y +A+ F+ Q+G V GGVEI+A TA L ++G TILS+DG NA+NS+ R LPA+A P +V Y N+YAR KLLF ++ G EVV S RGVQQGCNLG + G L I+KEF PPVPG + + ++DD+ LPP ++ ++ AI VT W+QERL +GI L+ KS+ L +G+ LT +++ + GL+V GM VVG+PVGTE+FQR+F+ + G+PAEL+ LA ++D QAS+Q+LRLS RL HLLRT+ PSIT AA +D ++ WA++ I+ G A + +PT E A Q HLP+REGGLG+TS+ I+ +A++ ALV + V AS + L RL
Sbjct: 136 SAPGPDGLRFSYLQAGGMSDSFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAFVAGQALVFSKSVQASTGYTVEQCLPRL 597
BLAST of mRNA_D-herbacea_F_contig1190.1352.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE) HSP 1 Score: 367 bits (943), Expect = 9.350e-120 Identity = 206/444 (46.40%), Postives = 273/444 (61.49%), Query Frame = 1
Query: 49 LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDSGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPEISLDIAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAASYDALVEWALASIIAGDGAAAAGLPTPAE----------------ALRQAHLPIREGGLGLTSSSSIKGAAYIGCHALVLGRVVAASARGNLPSLLERL 1329
+ D E LA F+ VF LP FW LHTSANLSALG+K RP+A G VLRR+I FCR+Y +A+ F+ Q+G V GGVEI+A TA L ++G TILS+DG NA+NS+ R LPA+A P + Y N+YAR KLLF ++ G EVV S RGVQQGCNLG + G L I+KEF PPVPGA+ + ++DD+ V LPP ++ +I AI VT W+Q+ L +GI L+ KS L +G+ LT +++ + TGL+V GM +VGVPVGTE FQR F+ G PAEL+ L+ ++D Q S+Q+LR+S RL HLLRT+ PSIT AA +D+L+ WA++ I+ G A G+PT E A Q HLPIREGGLG+TSS I+ +A++ ALV + V AS + L +L
Sbjct: 1 MSDYFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLAKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSNVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGIPAELIPRLSTLDDPQTSYQLLRMSGVPRLFHLLRTIAPSITNTAAREHDSLMIWAVSKIVLGKMANTVGIPTVEEVPANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAFVAGQALVFSKSVQASTGLTIEQCLPQL 444
BLAST of mRNA_D-herbacea_F_contig1190.1352.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE) HSP 1 Score: 368 bits (944), Expect = 7.390e-113 Identity = 203/445 (45.62%), Postives = 276/445 (62.02%), Query Frame = 1
Query: 49 LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDSGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPEISLDIAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAASYDALVEWALASIIAGDGAAAAGLPTPAE-----------------ALRQAHLPIREGGLGLTSSSSIKGAAYIGCHALVLGRVVAASARGNLPSLLERL 1329
+ D E LA F+ VF LP W LHTSANLSALG+K RP+A G VLRR+I F R+Y +A+ F+ Q+G V GGVEI+A TA L ++G TILS+DG NA+NS+ R LPA+A + P +V Y N+YAR KLLF ++ G EVV S RGVQQGCNLG + G L I+KEF PPVPG + + ++DD+ LPP ++ ++ AI VT W+QERL +GI L+ KS+ L +G+ LT +++ + GL+V GM VVG+PVGTE+FQR+F+ + G+PAEL+ LA ++D QAS+Q+LRLS RL HLLRT+ PSIT AA +D ++ WA++ I+ G A + +PT E A Q HLP+REGGLG+TS+ I+ +A++ ALV + V AS + L RL
Sbjct: 1 MSDSFTETLADFSFKVFYYGDELPDFLWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFYRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATLTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAFVAGQALVFSKSVQASTGYTVEQCLPRL 445
BLAST of mRNA_D-herbacea_F_contig1190.1352.1 vs. uniprot
Match: A0A6H5KQ62_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ62_9PHAE) HSP 1 Score: 250 bits (639), Expect = 1.540e-75 Identity = 134/262 (51.15%), Postives = 172/262 (65.65%), Query Frame = 1
Query: 1 SAAGPSGLRYSHLQAA-LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDSGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPEISLDIAAIGKVTEWLQERLGIEGISLNRRKSQAL 780
SA GP GLR+S+LQA + D E LA F+ VF LP FW LHTSANLSALG+K RP+A G VLRR+I FCR+Y +A+ F+ Q+G V GGVEI+A TA L ++G TILS+DG NA+NS+ R LPA+A P +V Y N+YAR KLLF ++ G EVV S RGVQQGCNLG + G L I+KEF PPVPG + + ++DD+ LPP ++ ++ AI VT W+QERL +GI L+ KS+ L
Sbjct: 136 SAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVL 397
BLAST of mRNA_D-herbacea_F_contig1190.1352.1 vs. uniprot
Match: A0A6H5K541_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K541_9PHAE) HSP 1 Score: 231 bits (590), Expect = 9.800e-70 Identity = 127/279 (45.52%), Postives = 173/279 (62.01%), Query Frame = 1
Query: 493 LDSGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPEISLDIAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAASYDALVEWALASIIAGDGAAAAGLPTPAE----------------ALRQAHLPIREGGLGLTSSSSIKGAAYIGCHALVLGRV 1281
++ G E+V S RGVQQGCNLG +S G L +KEF PPVPGA+ + ++DD+ V LPP ++ +I AI VT W+Q+ L +GI L+ KS+ L +G LT +++ + TGL+V GM +VGVPVGTE FQR F+ G PAEL+R L+ ++D QAS+Q+LRLS RL HLLRT+ PSIT AA +D L+ WA++ I+ G A G+PT E A Q HLPIREGGLG+TSS I+ +A++ ALV ++
Sbjct: 1 MEDGSIEIVRSQRGVQQGCNLGGFGFSVGLLDTMKEFNDKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGFFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAFVAGQALVFSKI 279
BLAST of mRNA_D-herbacea_F_contig1190.1352.1 vs. uniprot
Match: A0A6H5JLD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD7_9PHAE) HSP 1 Score: 197 bits (500), Expect = 4.560e-56 Identity = 109/263 (41.44%), Postives = 159/263 (60.46%), Query Frame = 1
Query: 592 LKEFRANPPVPGARAVSFIDDITVILPPEISLDIAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAASYDALVEWALASIIAGDGAAAAGLPTPAE-----------------ALRQAHLPIREGGLGLTSSSSIKGAAYIGCHALVLGRVVAASARGNLPSLLERL 1329
+KEF PPVPG + + ++DD+ LPP ++ ++ AI VT W+QERL +GI L+ KS+ L +G+ LT +++ + GL+V GM VVG+P GTE+FQR+F+ + G+PAEL+ LA ++D QAS+Q+LRLS RL HLLRT+ PSIT AA +D ++ WA++ I+ G A + +PT E A Q HLP+REGGLG+TS+ I+ +A++ ALV + V AS + L RL
Sbjct: 1 MKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPAGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAFVAGQALVFSKSVQASTGYTVEQCLPRL 263
BLAST of mRNA_D-herbacea_F_contig1190.1352.1 vs. uniprot
Match: A0A6H5JL76_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL76_9PHAE) HSP 1 Score: 191 bits (484), Expect = 1.390e-53 Identity = 112/262 (42.75%), Postives = 155/262 (59.16%), Query Frame = 1
Query: 592 LKEFRANPPVPGARAVSFIDDITVILPPEISLDIAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAASYDALVEWALASIIAGDGAAAAGLPTPAE----------------ALRQAHLPIREGGLGLTSSSSIKGAAYIGCHALVLGRVVAASARGNLPSLLERL 1329
+KEF PPVPGA+ + ++DD+ V LPP ++ +I AI VT W+Q+ L + I L+ KS+ L +G+ LT +++ + TGL+V GM +VGVPVGTE FQR F+ G PAEL+R L+ ++D QAS+Q+LRLS RL HLLRT PSIT AA +D L+ WA++ I+ G A G+PT E A Q HLPIREGGL +T S I+ +A++ ALV + V AS + L +L
Sbjct: 1 MKEFNDKPPVPGAKLIRYVDDLHVHLPPGLARNIQAIATVTNWIQDHLLRKVIELSLPKSKVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTTAPSITSTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLRITCSVLIRESAFVAGQALVFSKSVQASTGLTIEQCLPQL 262 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1190.1352.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig1190.1352.1 >prot_D-herbacea_F_contig1190.1352.1 ID=prot_D-herbacea_F_contig1190.1352.1|Name=mRNA_D-herbacea_F_contig1190.1352.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=444bp SAAGPSGLRYSHLQAALCDELVEDLAAFATLVFSSRVLPQVFWTLHTSANback to top mRNA from alignment at D-herbacea_F_contig1190:813..2195- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig1190.1352.1 ID=mRNA_D-herbacea_F_contig1190.1352.1|Name=mRNA_D-herbacea_F_contig1190.1352.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=1383bp|location=Sequence derived from alignment at D-herbacea_F_contig1190:813..2195- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig1190:813..2195- >mRNA_D-herbacea_F_contig1190.1352.1 ID=mRNA_D-herbacea_F_contig1190.1352.1|Name=mRNA_D-herbacea_F_contig1190.1352.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2664bp|location=Sequence derived from alignment at D-herbacea_F_contig1190:813..2195- (Desmarestia herbacea DmunF female)back to top |