mRNA_D-herbacea_F_contig119.1348.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig119.1348.1
Unique NamemRNA_D-herbacea_F_contig119.1348.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
[Close]
BLAST of mRNA_D-herbacea_F_contig119.1348.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 218 bits (554), Expect = 2.700e-71
Identity = 117/124 (94.35%), Postives = 119/124 (95.97%), Query Frame = 1 
Query:    1 MSGKGKGGRGDTKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVKK 372
            MSGKGKGGRG  KKSTTRSAKAGLQFPVGRVGRFLK GKYA RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKK+RI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK VKK
Sbjct:    1 MSGKGKGGRG--KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 122
[Close]
BLAST of mRNA_D-herbacea_F_contig119.1348.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 216 bits (549), Expect = 9.240e-70
Identity = 116/123 (94.31%), Postives = 118/123 (95.93%), Query Frame = 1 
Query:    1 MSGKGKGGRGDTKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVK 369
            MSGKGKGGRG  KKSTTRSAKAGLQFPVGRVGRFLK GKYA RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKK+RI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK VK
Sbjct:   46 MSGKGKGGRG--KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 166
[Close]
BLAST of mRNA_D-herbacea_F_contig119.1348.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 6.300e-66
Identity = 108/120 (90.00%), Postives = 115/120 (95.83%), Query Frame = 1 
Query:    1 MSGKGKGGRGDTKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 360
            MSGKGKGGRG  KKST++S+KAGLQFPV R+GR+LK GKYA RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKK+RI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRG--KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_D-herbacea_F_contig119.1348.1 vs. uniprot
Match: A0A836CG77_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG77_9STRA)

HSP 1 Score: 203 bits (516), Expect = 2.110e-65
Identity = 107/126 (84.92%), Postives = 116/126 (92.06%), Query Frame = 1 
Query:    1 MSGKGKGGRG-DTKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVKKA 375
            M+GKGKGGRG + KKST++S+KAGLQFPV R+GRFLK G+YA+RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKK    A
Sbjct:    1 MAGKGKGGRGAEAKKSTSKSSKAGLQFPVARLGRFLKVGRYAERVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHAVLLPKKTASAA 126
[Close]
BLAST of mRNA_D-herbacea_F_contig119.1348.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 204 bits (520), Expect = 3.220e-65
Identity = 108/120 (90.00%), Postives = 115/120 (95.83%), Query Frame = 1 
Query:    1 MSGKGKGGRGDTKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 360
            MSGKGKGGRG  KKST++S+KAGLQFPV R+GR+LK GKYA RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKK+RI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:   52 MSGKGKGGRG--KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 169
[Close]
BLAST of mRNA_D-herbacea_F_contig119.1348.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 1.250e-64
Identity = 105/120 (87.50%), Postives = 113/120 (94.17%), Query Frame = 1 
Query:    1 MSGKGKGGRGDTKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 360
            MSGKGKGGRG  KK T+RSAKAGLQFPVGR+GRF+K GKY+ RVG GAPVY+AAVLEYLTAEVLELAGNAARDNKK+RIVPRHIQLAVRNDEELN+LLG+ TIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRG--KKITSRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_D-herbacea_F_contig119.1348.1 vs. uniprot
Match: A0A448ZH28_9STRA (Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 RepID=A0A448ZH28_9STRA)

HSP 1 Score: 199 bits (507), Expect = 3.960e-64
Identity = 105/120 (87.50%), Postives = 113/120 (94.17%), Query Frame = 1 
Query:    1 MSGKGKGGRGDTKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 360
            MSGKGKGGRG+ KKSTT SAKAGLQFPVGR+GR+L+ GKYA R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKKSRIVPRHI LAV+NDEELNKLLG VTIASGGVLPNIHA+LLPKK
Sbjct:    1 MSGKGKGGRGE-KKSTTASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAILLPKK 119
[Close]
BLAST of mRNA_D-herbacea_F_contig119.1348.1 vs. uniprot
Match: A0A6U2JFS4_9STRA (Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A6U2JFS4_9STRA)

HSP 1 Score: 199 bits (507), Expect = 3.960e-64
Identity = 107/123 (86.99%), Postives = 113/123 (91.87%), Query Frame = 1 
Query:    1 MSGKGKGGRGDTKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVK 369
            MSGKGKGGRG  KKSTT SAKAGLQFPVGR+GR+L+ GKYA R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKKSRIVPRHI LAV+NDEELNKLLG VTIASGGVLPNIHAVLLPKK  K
Sbjct:    1 MSGKGKGGRGG-KKSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAVLLPKKSAK 122
[Close]
BLAST of mRNA_D-herbacea_F_contig119.1348.1 vs. uniprot
Match: A0A835ZLE9_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE9_9STRA)

HSP 1 Score: 199 bits (507), Expect = 7.100e-64
Identity = 104/123 (84.55%), Postives = 116/123 (94.31%), Query Frame = 1 
Query:    7 GKGKGGRGDTKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVKKA 375
            GKGKGGRGD KK+ ++SAKAGLQFPVGRVGRFLK G+YA+RVGAGAPVY+AAV+EYL AEVLEL+GNAARDNKKSRI+PRHIQLAVRNDEELNKLLG+VTIA+GGVLPNIHAVLLPKK   K+
Sbjct:    5 GKGKGGRGD-KKAVSKSAKAGLQFPVGRVGRFLKQGRYAKRVGAGAPVYMAAVMEYLCAEVLELSGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGKVTIAAGGVLPNIHAVLLPKKTRSKS 126
[Close]
BLAST of mRNA_D-herbacea_F_contig119.1348.1 vs. uniprot
Match: A0A835ZBB6_9STRA (Histone H2A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBB6_9STRA)

HSP 1 Score: 199 bits (506), Expect = 7.780e-64
Identity = 106/126 (84.13%), Postives = 115/126 (91.27%), Query Frame = 1 
Query:    1 MSGKGKGGRG-DTKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVKKA 375
            M+GKGKGGRG + KK T++SAKAGLQFPV R+GR+LK G+YA RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKKSRIVPRHIQLAVRNDEELN+LLG VTIASGGVLPNIHAVLLPKK   KA
Sbjct:    1 MAGKGKGGRGAEGKKITSQSAKAGLQFPVARMGRYLKQGRYADRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNRLLGNVTIASGGVLPNIHAVLLPKKTAAKA 126
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig119.1348.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWI9_ECTSI2.700e-7194.35Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
D7G193_ECTSI9.240e-7094.31Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KG79_9PHAE6.300e-6690.00Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A836CG77_9STRA2.110e-6584.92Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
D7FVQ5_ECTSI3.220e-6590.00Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D8LLP0_ECTSI1.250e-6487.50Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A448ZH28_9STRA3.960e-6487.50Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 Re... [more]
A0A6U2JFS4_9STRA3.960e-6486.99Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 Rep... [more]
A0A835ZLE9_9STRA7.100e-6484.55Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A835ZBB6_9STRA7.780e-6484.13Histone H2A n=1 Tax=Tribonema minus TaxID=303371 R... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig119contigD-herbacea_F_contig119:831464..831841 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score221.1
Seed ortholog evalue3e-55
Seed eggNOG ortholog2880.D7G4I2
Preferred nameH2AFY
KEGG koko:K11251,ko:K16617
KEGG Pathwayko04217,ko04974,ko05034,ko05322,map04217,map04974,map05034,map05322
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0000182,GO:0000228,GO:0000775,GO:0000785,GO:0000786,GO:0000790,GO:0000792,GO:0000793,GO:0000803,GO:0000805,GO:0000976,GO:0000977,GO:0000979,GO:0001012,GO:0001046,GO:0001047,GO:0001067,GO:0001739,GO:0001740,GO:0001932,GO:0001933,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0004857,GO:0004860,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005720,GO:0005721,GO:0005730,GO:0005813,GO:0005815,GO:0005856,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006342,GO:0006355,GO:0006356,GO:0006357,GO:0006469,GO:0006996,GO:0007063,GO:0007088,GO:0007275,GO:0007346,GO:0007399,GO:0007417,GO:0007420,GO:0007549,GO:0008104,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0010385,GO:0010468,GO:0010556,GO:0010558,GO:0010563,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0010639,GO:0010948,GO:0015630,GO:0016043,GO:0016458,GO:0016479,GO:0019207,GO:0019210,GO:0019216,GO:0019219,GO:0019220,GO:0019222,GO:0019887,GO:0019899,GO:0019900,GO:0019901,GO:0022607,GO:0030234,GO:0030291,GO:0030856,GO:0030858,GO:0031056,GO:0031057,GO:0031060,GO:0031061,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031399,GO:0031400,GO:0031490,GO:0031491,GO:0031492,GO:0031497,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032991,GO:0032993,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0033127,GO:0033128,GO:0033365,GO:0033673,GO:0034091,GO:0034093,GO:0034182,GO:0034184,GO:0034502,GO:0034613,GO:0034622,GO:0034728,GO:0040029,GO:0042325,GO:0042326,GO:0043086,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043549,GO:0043565,GO:0043933,GO:0044085,GO:0044092,GO:0044212,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044454,GO:0044464,GO:0044815,GO:0044877,GO:0045184,GO:0045595,GO:0045597,GO:0045604,GO:0045606,GO:0045616,GO:0045618,GO:0045682,GO:0045684,GO:0045786,GO:0045787,GO:0045814,GO:0045815,GO:0045840,GO:0045859,GO:0045876,GO:0045892,GO:0045931,GO:0045934,GO:0045936,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048731,GO:0048856,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051276,GO:0051338,GO:0051348,GO:0051569,GO:0051572,GO:0051641,GO:0051726,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0060255,GO:0060322,GO:0060341,GO:0061085,GO:0061086,GO:0062033,GO:0065003,GO:0065004,GO:0065007,GO:0065009,GO:0070013,GO:0070199,GO:0070727,GO:0071103,GO:0071168,GO:0071169,GO:0071824,GO:0071840,GO:0071900,GO:0071901,GO:0072594,GO:0080090,GO:0080134,GO:0090068,GO:0097159,GO:0098687,GO:0098772,GO:1901363,GO:1901836,GO:1901837,GO:1901987,GO:1901988,GO:1902275,GO:1902679,GO:1902749,GO:1902750,GO:1902882,GO:1902883,GO:1902884,GO:1903506,GO:1903507,GO:1903827,GO:1903828,GO:1904814,GO:1904815,GO:1905268,GO:1990837,GO:1990841,GO:2000026,GO:2000112,GO:2000113,GO:2001141,GO:2001251,GO:2001252
EggNOG free text desc.Histone H2A
EggNOG OGsCOG5262@1,KOG1756@2759
COG Functional cat.B
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00536,ko03036,ko04147
Exons1
Model size378
Cds size378
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927581.489166-CDS-D-herbacea_F_contig119:831463..8318411622927581.489166-CDS-D-herbacea_F_contig119:831463..831841Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig119 831464..831841 -
1690790243.483728-CDS-D-herbacea_F_contig119:831463..8318411690790243.483728-CDS-D-herbacea_F_contig119:831463..831841Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig119 831464..831841 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig119.1348.1prot_D-herbacea_F_contig119.1348.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig119 831464..831841 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig119.1348.1

>prot_D-herbacea_F_contig119.1348.1 ID=prot_D-herbacea_F_contig119.1348.1|Name=mRNA_D-herbacea_F_contig119.1348.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=126bp
MSGKGKGGRGDTKKSTTRSAKAGLQFPVGRVGRFLKAGKYAQRVGAGAPV
YLAAVLEYLTAEVLELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGE
VTIASGGVLPNIHAVLLPKKVVKKA*
back to top

mRNA from alignment at D-herbacea_F_contig119:831464..831841-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig119.1348.1 ID=mRNA_D-herbacea_F_contig119.1348.1|Name=mRNA_D-herbacea_F_contig119.1348.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=378bp|location=Sequence derived from alignment at D-herbacea_F_contig119:831464..831841- (Desmarestia herbacea DmunF female)
ATGTCTGGCAAGGGTAAGGGTGGGCGCGGTGACACCAAGAAGTCCACTAC
CAGGTCCGCCAAGGCCGGGCTGCAGTTCCCCGTTGGTCGCGTTGGTCGCT
TCCTCAAAGCCGGCAAGTACGCTCAGCGCGTGGGCGCCGGTGCCCCCGTG
TACCTGGCCGCTGTTCTTGAGTACCTGACTGCTGAGGTTCTGGAGCTTGC
CGGTAACGCTGCCCGCGACAACAAGAAGTCCCGCATTGTGCCCCGTCACA
TTCAGCTGGCCGTCCGCAACGACGAGGAGCTGAACAAGCTTTTGGGCGAG
GTGACCATCGCTTCCGGCGGTGTGCTTCCCAACATCCACGCGGTGCTTCT
GCCCAAGAAGGTGGTCAAGAAGGCCTAG
back to top

Coding sequence (CDS) from alignment at D-herbacea_F_contig119:831464..831841-

>mRNA_D-herbacea_F_contig119.1348.1 ID=mRNA_D-herbacea_F_contig119.1348.1|Name=mRNA_D-herbacea_F_contig119.1348.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=756bp|location=Sequence derived from alignment at D-herbacea_F_contig119:831464..831841- (Desmarestia herbacea DmunF female)
ATGTCTGGCAAGGGTAAGGGTGGGCGCGGTGACACCAAGAAGTCCACTAC
CAGGTCCGCCAAGGCCGGGCTGCAGTTCCCCGTTGGTCGCGTTGGTCGCT
TCCTCAAAGCCGGCAAGTACGCTCAGCGCGTGGGCGCCGGTGCCCCCGTG
TACCTGGCCGCTGTTCTTGAGTACCTGACTGCTGAGGTTCTGGAGCTTGC
CGGTAACGCTGCCCGCGACAACAAGAAGTCCCGCATTGTGCCCCGTCACA
TTCAGCTGGCCGTCCGCAACGACGAGGAGCTGAACAAGCTTTTGGGCGAG
GTGACCATCGCTTCCGGCGGTGTGCTTCCCAACATCCACGCGGTGCTTCT
GCCCAAGAAGGTGGTCAAGAAGGCCTAGATGTCTGGCAAGGGTAAGGGTG
GGCGCGGTGACACCAAGAAGTCCACTACCAGGTCCGCCAAGGCCGGGCTG
CAGTTCCCCGTTGGTCGCGTTGGTCGCTTCCTCAAAGCCGGCAAGTACGC
TCAGCGCGTGGGCGCCGGTGCCCCCGTGTACCTGGCCGCTGTTCTTGAGT
ACCTGACTGCTGAGGTTCTGGAGCTTGCCGGTAACGCTGCCCGCGACAAC
AAGAAGTCCCGCATTGTGCCCCGTCACATTCAGCTGGCCGTCCGCAACGA
CGAGGAGCTGAACAAGCTTTTGGGCGAGGTGACCATCGCTTCCGGCGGTG
TGCTTCCCAACATCCACGCGGTGCTTCTGCCCAAGAAGGTGGTCAAGAAG
GCCTAG
back to top