mRNA_D-herbacea_F_contig119.1324.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig119.1324.1
Unique NamemRNA_D-herbacea_F_contig119.1324.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
[Close]
BLAST of mRNA_D-herbacea_F_contig119.1324.1 vs. uniprot
Match: D7FRH9_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH9_ECTSI)

HSP 1 Score: 278 bits (711), Expect = 2.530e-92
Identity = 137/158 (86.71%), Postives = 142/158 (89.87%), Query Frame = 1 
Query:  295 DVWEHMKFLGKKCTRKEVTDIVWEVDENLDGAIDWDEFRLMFFRNINDRTGLEPAKMYNMVQFMLYDVDNNVNVSVDETMNMLYARRPPPVPVLHFYCRYGRTKMESKLKELFGEGMRETGTQGGEIDFLEYLEAVERTQLNTFVQSSVGRAQLAKTG 768
            D+WEHMKFLGKKCTRKEVTDIVWEVDENLDG +DWDEF+LMFFRNIND TGLEPAK+YNMVQFMLYDVDNNVNVSVDETMNMLYAR             YGRTKME+KLKELFGEGMRETGTQGGEI FLEYLEAVERTQLNTFVQSSVGRAQLAKTG
Sbjct:   15 DIWEHMKFLGKKCTRKEVTDIVWEVDENLDGLVDWDEFKLMFFRNINDHTGLEPAKLYNMVQFMLYDVDNNVNVSVDETMNMLYAR-------------YGRTKMEAKLKELFGEGMRETGTQGGEIGFLEYLEAVERTQLNTFVQSSVGRAQLAKTG 159
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BLAST of mRNA_D-herbacea_F_contig119.1324.1 vs. uniprot
Match: A0A7S2UTN0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTN0_9STRA)

HSP 1 Score: 235 bits (600), Expect = 9.780e-74
Identity = 133/287 (46.34%), Postives = 180/287 (62.72%), Query Frame = 1 
Query:    7 DEDQVINISAQEDKGLRRAYDRLCDFSQKEKIRRE-----------INAIQTKINALSVPPQSKLSKVVANDAQVKAEE-----------------------DKLTEEMHALEQDLARLENIPDNKIKAVDVWEHMKFLGKKCTRKEVTDIVWEVDENLDGAIDWDEFRLMFFRNINDRTGLEPAKMYNMVQFMLYDVDNNVNVSVDETMNMLYARRPPPVPVLHFYCRYGRTKMESKLKELFGEGMRETGTQGGEIDFLEYLEAVERTQLNTFVQSSVGRAQLAKT 765
            +ED   NI+ QE++ L R Y+ LC F ++ K+ +E           I+ +QT      +  Q +L +  +  AQ + +E                       ++LT E++ +E  +  L + PD KI+A D+ E ++FLGKK T+KEV D++WEVDENLDG +DW+E+RLMF RNI DRTGLEP+K+YNMVQFM+YD DN   VSVD+TMNMLYAR             YGR++ME KL+ELFG  MRE G QGGEIDFL YL+AVERTQ+NTF+ +S+G+   AKT
Sbjct:    5 EEDVPQNITPQEERELVRTYNHLCHFLKRSKLEKEAAPKRARRQELIDKVQTSKKIHEIRQQQELEQNGSALAQQQIDELDSSYADLAPMGSVEMAQMQDDINQLTAEINGIESQIEALRSDPDKKIRAPDLMEALRFLGKKVTKKEVADMIWEVDENLDGCVDWEEYRLMFQRNIFDRTGLEPSKLYNMVQFMIYDHDNKGLVSVDQTMNMLYAR-------------YGRSRMEQKLRELFGTDMRENGKQGGEIDFLTYLQAVERTQMNTFLNTSLGKTTAAKT 278
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BLAST of mRNA_D-herbacea_F_contig119.1324.1 vs. uniprot
Match: A0A836CM15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM15_9STRA)

HSP 1 Score: 228 bits (582), Expect = 4.000e-71
Identity = 134/282 (47.52%), Postives = 176/282 (62.41%), Query Frame = 1 
Query:    7 DEDQVINISAQEDKGLRRAYDRLCDFSQKEKIRREINAIQTKINALSVPPQSKLSKVVANDAQVKAEEDKLTEEMHALEQDLARLENIPDN-KIKAVDVWEHMKFLGKKCTRKEVTDIVWEVDENLDGAIDWDEFRLMFFRNINDRTGLEPAKMYNM---------------------------VQFMLYDVDNNVNVSVDETMNMLYARRPPPVPVLHFYCRYGRTKMESKLKELFGEGMRETGTQGGEIDFLEYLEAVERTQLNTFVQSSVGRAQLAKTG 768
            DE+ +  IS QE++ LRR +D+LCDF+ K+ +     A+   ++  +V    ++              D+L  E+ AL+Q L  LE+   + KIKA+DV + M  LG++CT+KEV D++WEVDENLDG +DW+EFRLMF RN+NDRTGLEP+K+YNM                           VQFM+YDV+ N  VSVDETMNMLYAR             YGR +ME KLKELFGE MRETGTQGGEI F +YL +VERTQL TF+ +++G+A LAK G
Sbjct:    5 DEEGLTQISPQEERELRRVFDKLCDFNAKQNL----TALHMYMHMWNVCHTEEV--------------DRLGGEIAALQQQLRALESPSGSQKIKAIDVSQSMAVLGRRCTKKEVMDMIWEVDENLDGCVDWEEFRLMFNRNVNDRTGLEPSKLYNMSFHAAKPRKKHAGLDDKPSHLLCLQAQVQFMVYDVNGNGLVSVDETMNMLYAR-------------YGRARMEVKLKELFGEEMRETGTQGGEITFTQYLASVERTQLATFLGTNMGKAHLAKVG 255
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BLAST of mRNA_D-herbacea_F_contig119.1324.1 vs. uniprot
Match: F0Y9Y6_AURAN (EF-hand domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9Y6_AURAN)

HSP 1 Score: 203 bits (517), Expect = 1.890e-62
Identity = 108/191 (56.54%), Postives = 136/191 (71.20%), Query Frame = 1 
Query:  196 VKAEEDKLTEEMHALEQDLARLENIPDNKIKAVDVWEHMKFLGKKCTRKEVTDIVWEVDENLDGAIDWDEFRLMFFRNINDRTGLEPAKMYNMVQFMLYDVDNNVNVSVDETMNMLYARRPPPVPVLHFYCRYGRTKMESKLKELFGEGMRETGTQGGEIDFLEYLEAVERTQLNTFVQSSVGRAQLAKTG 768
            V AE  KL +E+  L+  L  +E   D  I   D+ E +K LGKK  RK+V D++WEVDE+LD  ++W+E  LMF RNI DRTGLEP++++N+VQFM++D D N  VSVDETMNMLYAR             YGR +ME+KLKELFG+ MRETGTQGGEIDFL YL AVE+TQL TF+ S+ G+AQ+AK G
Sbjct:    2 VAAELQKLDDEIEELQIKLRTIEAESDGLISVQDLMEALKTLGKKTPRKDVEDMIWEVDEDLDCCVNWEEMLLMFQRNIRDRTGLEPSQLFNVVQFMIFDQDENGLVSVDETMNMLYAR-------------YGRVRMEAKLKELFGDDMRETGTQGGEIDFLTYLRAVEKTQLMTFLNSAHGKAQVAKAG 179
[Close]
BLAST of mRNA_D-herbacea_F_contig119.1324.1 vs. uniprot
Match: A0A6S9HP31_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9HP31_HETAK)

HSP 1 Score: 204 bits (518), Expect = 1.860e-61
Identity = 115/283 (40.64%), Postives = 170/283 (60.07%), Query Frame = 1 
Query:    7 DEDQVINISAQEDKGLRRAYDRLCDFSQKEKIRREINAIQTKINALS--------------------VPPQSKLSKVVANDAQV-----KAEEDKLTEEMHALEQDLARLEN----IPDNKIKAVDVWEHMKFLGKKCTRKEVTDIVWEVDENLDGAIDWDEFRLMFFRNINDRTGLEPAKMYNMVQFMLYDVDNNVNVSVDETMNMLYARRPPPVPVLHFYCRYGRTKMESKLKELFGEGMRETGTQGGEIDFLEYLEAVERTQLNTFVQSSVGRAQLAKTG 768
            +E+ ++ ++ QE++ LRR ++RLCDF +K ++ + I     +++ L                      P Q +  +      ++     +AE   L+ E+     +LA LE      P+ KI+  D+ E  +FLG+  TRK+V D++WEVDENLDGA+DW+EFRLMF RN+ DRTGLEPA++Y+M QFM+YD  N   V+VD+TM+MLYAR             YG+ KME+KLK LFG  M+E+GT+GG I F +YL AV++TQL TF+ +S+G+    K G
Sbjct:    6 EEEPIVPMTQQEERELRRVFERLCDFHKKMRLAQAIEPRVERMDELKKKYTVYEEPEPEDVWKMEEKTPEQLEREREARGRLEIPEGPERAEWATLSAEVEQHRAELAALERPPAGAPEQKIRPADLLEAARFLGRPATRKDVQDVIWEVDENLDGAVDWEEFRLMFERNVGDRTGLEPAQLYHMAQFMMYDARNTGRVTVDQTMSMLYAR-------------YGKAKMEAKLKILFGRDMKESGTEGGAITFQQYLMAVQKTQLETFLATSLGKKIAKKLG 275
[Close]
BLAST of mRNA_D-herbacea_F_contig119.1324.1 vs. uniprot
Match: A0A8J2X371_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X371_9STRA)

HSP 1 Score: 195 bits (496), Expect = 3.500e-58
Identity = 105/249 (42.17%), Postives = 154/249 (61.85%), Query Frame = 1 
Query:   16 QVINISAQEDKGLRRAYDRLCDFSQKEKIRREINAIQTKINALSVPPQSKLSKVVANDAQVKAEEDKLTEEMHALEQDLARLENIPDNKIKAVDVWEHMKFLGKKCTRKEVTDIVWEVDENLDGAIDWDEFRLMFFRNINDRTGLEPAKMYNMVQFMLYDVDNNVNVSVDETMNMLYARRPPPVPVLHFYCRYGRTKMESKLKELFGEGMRETGTQGGEIDFLEYLEAVERTQLNTFVQSSVGRAQLAK 762
            +   I+ QE+  LRR +  LCD+  K+K+ + +   Q ++  L      + + ++     V +E   L  ++  L QDL  +E   D  +  VD+ E +K LG+K  +K+   ++WEVDE+LDG + WDE RLMF RNI D TGLEP++++N+V F+++D+D +  VSVDETM +LYAR             YGR KME +LK LFG+ M+E G  GGEIDF+ YL AVE+TQL TF+QS+ G+A + K
Sbjct:    8 EAAEITPQEENQLRRVHRLLCDYGAKKKVLKLLRPKQDQLEKLRQSADDEQADIL-----VASEIQSLETDVEKLRQDLQEIEKKSDGLVSCVDLLEALKTLGRKAQKKDAEAMIWEVDEDLDGCVSWDEMRLMFQRNIRDTTGLEPSQLFNVVMFLIFDLDEDGMVSVDETMELLYAR-------------YGRHKMEDRLKMLFGDDMKEEGKGGGEIDFVTYLRAVEKTQLATFLQSNYGKALVNK 238
[Close]
BLAST of mRNA_D-herbacea_F_contig119.1324.1 vs. uniprot
Match: A0A812T3T1_SYMMI (Cam1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812T3T1_SYMMI)

HSP 1 Score: 178 bits (452), Expect = 1.460e-52
Identity = 92/186 (49.46%), Postives = 122/186 (65.59%), Query Frame = 1 
Query:  169 SKVVANDAQVKAEEDKLTEEMHALEQDLARLENIPDNKIKAVDVWEHMKFLGKKCTRKEVTDIVWEVDENLDGAIDWDEFRLMFFRNINDRTGLEPAKMYNMVQFMLYDVDNNVNVSVDETMNMLYARRPPPVPVLHFYCRYGRTKMESKLKELFGEGMRETGTQGGEIDFLEYLEAVERTQLNTF 726
            ++V  N  +++  E     ++  + Q    LE  PD KI   D+ E ++ L  K  +KEV +++WEVD++LDG IDW EFRLMF RNI D  GLEP+KM+N+ QF++YD + N  VSVDETMNMLYAR             YGRTKME+KLKELFGE M ETG +GGEI + E++ AVE+ Q+ TF
Sbjct:    3 TRVTPNYKEIEEAEVSAQVQIDEMNQTYTELETNPDRKISCNDILEMLRRLKAKTNKKEVQEMIWEVDDDLDGCIDWGEFRLMFTRNIMDNCGLEPSKMFNLTQFLIYDHNCNGRVSVDETMNMLYAR-------------YGRTKMETKLKELFGENMHETGREGGEISYQEFIRAVEKVQVQTF 175
[Close]
BLAST of mRNA_D-herbacea_F_contig119.1324.1 vs. uniprot
Match: A0A813C532_9DINO (TNNC2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813C532_9DINO)

HSP 1 Score: 166 bits (419), Expect = 8.740e-47
Identity = 93/234 (39.74%), Postives = 145/234 (61.97%), Query Frame = 1 
Query:   25 NISAQEDKGLRRAYDRLCDFSQKEKIR--------REINAIQTKINALSVPPQSKLSKVVANDAQVKAEEDKLTEEMHALEQDLARLENIPDNKIKAVDVWEHMKFLGKKCTRKEVTDIVWEVDENLDGAIDWDEFRLMFFRNINDRTGLEPAKMYNMVQFMLYDVDNNVNVSVDETMNMLYARRPPPVPVLHFYCRYGRTKMESKLKELFGEGMRETGTQGGEIDFLEYLEAV 702
            +++A E K L R ++ LCDF+ K K+         R+   +  K N  +V  +    + +++D  + AE  +L EE+  +E  +  +++  D K+K  D+ E + FLGK+ ++KE+ D++WEVDENLDG +DW+EF+LMF RNI D TG EP +++N+VQFM+YDVD +  VSVDETM+MLYAR             YG+ ++E ++K LFG+ +       G + FL+YL+AV
Sbjct:   32 DVTANELKELERVFEFLCDFAPKNKLNNLLKPKLERKQKILSYKKNPEAVKLEDDTGRELSDDL-IDAELQRLEEEIGDIEAQINTIKSKQDKKVKPKDLQEALAFLGKRSSKKEIEDMIWEVDENLDGCVDWEEFQLMFQRNIKDTTGKEPFQLFNVVQFMMYDVDFSGEVSVDETMHMLYAR-------------YGKARLEREMKALFGDKLH---NGNGTLTFLDYLKAV 248
[Close]
BLAST of mRNA_D-herbacea_F_contig119.1324.1 vs. uniprot
Match: A0A2R5GQD3_9STRA (Calmodulin n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GQD3_9STRA)

HSP 1 Score: 163 bits (412), Expect = 4.830e-46
Identity = 89/235 (37.87%), Postives = 146/235 (62.13%), Query Frame = 1 
Query:   28 ISAQEDKGLRRAYDRLCDFSQKEKIRREINAIQTKINALSVPPQSKLSKVVAN-------DAQVKAEEDKLTEEMHALEQDLARLENIPDNKIKAVDVWEHMKFLGKKCTRKEVTDIVWEVDENLDGAIDWDEFRLMFFRNINDRTGLEPAKMYNMVQFMLYDVDNNVNVSVDETMNMLYARRPPPVPVLHFYCRYGRTKMESKLKELFGEGMRETGTQGGEIDFLEYLEAVERT 711
            IS  E+K L R Y+ +C++  K K+   +   + + + L    ++  + VV N         +++AE + L +E+ ALE+++A L++ P  +I+  D+ E +K LGK  ++KE+ +++WEVDE+LDG +DW+EF+L + RN+ D TGLEP +++N++QFM+YD D +  V+VDETM+MLY R             YGR ++E ++K LFGE +  T    GE+ F EY  A++RT
Sbjct:   11 ISQNEEKELLRVYNTMCNYQPKSKLYARLQPQRARRDRLVAHRKAPDNIVVTNKEGEAMSSEEIEAEYETLRQEIAALEKEVAVLDSDPQRRIRPADLAECLKTLGKPNSKKEIEEMIWEVDESLDGVVDWEEFKLTYQRNLADTTGLEPCQLFNVIQFMIYDKDGSGKVTVDETMHMLYTR-------------YGRDRLEGQMKLLFGEDLS-TQDGDGELSFSEYCVAIQRT 231
[Close]
BLAST of mRNA_D-herbacea_F_contig119.1324.1 vs. uniprot
Match: K0TBM4_THAOC (EF-hand domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TBM4_THAOC)

HSP 1 Score: 162 bits (411), Expect = 9.860e-46
Identity = 104/246 (42.28%), Postives = 141/246 (57.32%), Query Frame = 1 
Query:   28 ISAQEDKGLRRAYDRLCDFSQKEKIRREINAIQTKINALSVPPQSKL--------SKVVANDAQVKAEEDK------LTEEMHALEQDLARLENIPDNKIKAVDVWEHMKFLGKKCTRKEVTDIVWEVDENLDGAIDWDEFRLMFFRNINDRTGLEPAKMYNMVQFMLYDVDNNVNVSVDETMNMLYARRPPPVPVLHFYCRYGRTKMESKLKELFGE---GMRETGTQGGEIDFLEYLEAVERTQ 714
            I+  E K LRR YD+LC FS+K    + + +I+  +   S P  S +        S      + +  EED+      L +E   LE+ L+ + +     I+  D    +K LGK+ +++EV +++WEVDE LDG IDWDEF+L F RNI D +GLEPA  Y+MVQFM+YD DNN  VS+DETMNMLYAR              GRT+MES + +LFG     ++E G QGGEIDF +Y   V R Q
Sbjct:   15 IAPNELKELRRVYDQLCFFSEKAGTMQRLQSIKCTLAEYSRPLTSSMRQRDFFLSSSGHHRQSILGGEEDRETKMAALQQEQAELEKKLSEIRSRNAQYIRPQDTAAALKSLGKRVSKREVQNMMWEVDEKLDGVIDWDEFQLNFERNIRDSSGLEPASFYHMVQFMIYDRDNNGLVSIDETMNMLYAR-------------VGRTEMESVITKLFGGDDGAIKEDGRQGGEIDFQKYSSVVVREQ 247
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig119.1324.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRH9_ECTSI2.530e-9286.71EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S2UTN0_9STRA9.780e-7446.34Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CM15_9STRA4.000e-7147.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
F0Y9Y6_AURAN1.890e-6256.54EF-hand domain-containing protein n=1 Tax=Aureococ... [more]
A0A6S9HP31_HETAK1.860e-6140.64Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8J2X371_9STRA3.500e-5842.17Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A812T3T1_SYMMI1.460e-5249.46Cam1 protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A813C532_9DINO8.740e-4739.74TNNC2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A2R5GQD3_9STRA4.830e-4637.87Calmodulin n=1 Tax=Hondaea fermentalgiana TaxID=23... [more]
K0TBM4_THAOC9.860e-4642.28EF-hand domain-containing protein n=1 Tax=Thalassi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig119contigD-herbacea_F_contig119:396886..402075 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score279.6
Seed ortholog evalue1.4e-72
Seed eggNOG ortholog2880.D7FRH9
Hectar predicted targeting categoryother localisation
EggNOG free text desc.EF-hand domain pair
EggNOG OGs2CS8I@1,2RAUZ@2759
Ec32 ortholog descriptionEF-hand domain pair
Ec32 orthologEc-09_000020.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size771
Cds size771
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927576.8669233-CDS-D-herbacea_F_contig119:396885..3969931622927576.8669233-CDS-D-herbacea_F_contig119:396885..396993Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig119 396886..396993 -
1690790241.668895-CDS-D-herbacea_F_contig119:396885..3969931690790241.668895-CDS-D-herbacea_F_contig119:396885..396993Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig119 396886..396993 -
1622927576.8772676-CDS-D-herbacea_F_contig119:397381..3974891622927576.8772676-CDS-D-herbacea_F_contig119:397381..397489Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig119 397382..397489 -
1690790241.6829557-CDS-D-herbacea_F_contig119:397381..3974891690790241.6829557-CDS-D-herbacea_F_contig119:397381..397489Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig119 397382..397489 -
1622927576.8877773-CDS-D-herbacea_F_contig119:398264..3984211622927576.8877773-CDS-D-herbacea_F_contig119:398264..398421Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig119 398265..398421 -
1690790241.70051-CDS-D-herbacea_F_contig119:398264..3984211690790241.70051-CDS-D-herbacea_F_contig119:398264..398421Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig119 398265..398421 -
1622927576.9002595-CDS-D-herbacea_F_contig119:399342..3994461622927576.9002595-CDS-D-herbacea_F_contig119:399342..399446Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig119 399343..399446 -
1690790241.7150822-CDS-D-herbacea_F_contig119:399342..3994461690790241.7150822-CDS-D-herbacea_F_contig119:399342..399446Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig119 399343..399446 -
1622927576.913399-CDS-D-herbacea_F_contig119:399949..4000361622927576.913399-CDS-D-herbacea_F_contig119:399949..400036Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig119 399950..400036 -
1690790241.7266104-CDS-D-herbacea_F_contig119:399949..4000361690790241.7266104-CDS-D-herbacea_F_contig119:399949..400036Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig119 399950..400036 -
1622927576.926122-CDS-D-herbacea_F_contig119:400372..4004811622927576.926122-CDS-D-herbacea_F_contig119:400372..400481Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig119 400373..400481 -
1690790241.7358844-CDS-D-herbacea_F_contig119:400372..4004811690790241.7358844-CDS-D-herbacea_F_contig119:400372..400481Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig119 400373..400481 -
1622927576.9434495-CDS-D-herbacea_F_contig119:401977..4020751622927576.9434495-CDS-D-herbacea_F_contig119:401977..402075Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig119 401978..402075 -
1690790241.748031-CDS-D-herbacea_F_contig119:401977..4020751690790241.748031-CDS-D-herbacea_F_contig119:401977..402075Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig119 401978..402075 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig119.1324.1prot_D-herbacea_F_contig119.1324.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig119 396886..402075 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig119.1324.1

>prot_D-herbacea_F_contig119.1324.1 ID=prot_D-herbacea_F_contig119.1324.1|Name=mRNA_D-herbacea_F_contig119.1324.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=257bp
MGDEDQVINISAQEDKGLRRAYDRLCDFSQKEKIRREINAIQTKINALSV
PPQSKLSKVVANDAQVKAEEDKLTEEMHALEQDLARLENIPDNKIKAVDV
WEHMKFLGKKCTRKEVTDIVWEVDENLDGAIDWDEFRLMFFRNINDRTGL
EPAKMYNMVQFMLYDVDNNVNVSVDETMNMLYARRPPPVPVLHFYCRYGR
TKMESKLKELFGEGMRETGTQGGEIDFLEYLEAVERTQLNTFVQSSVGRA
QLAKTGQ
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mRNA from alignment at D-herbacea_F_contig119:396886..402075-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig119.1324.1 ID=mRNA_D-herbacea_F_contig119.1324.1|Name=mRNA_D-herbacea_F_contig119.1324.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=5190bp|location=Sequence derived from alignment at D-herbacea_F_contig119:396886..402075- (Desmarestia herbacea DmunF female)
ATGGGGGACGAAGATCAGGTGATCAACATCTCCGCGCAGGAGGACAAGGG
CTTGAGAAGGGCATACGATCGTCTTTGCGACTTCAGCCAGAAAGAAAAGT
GAGTCGCTTATTCGAGACACCATTCAAGAAACGATCGACAGACGACACCA
TTATGCTGCACAGCAGACACGTCATTGCTGGAATCCCACGACGTTAGCCA
GATAGATCGGTCAATGCATCCCGCTCAGTCCCACTGTTAAATCAAATCGT
GGATGTTATCTATCATAGAGAACCTTTTCTCTAGTTGGAGGGAGTTTCGT
GTGTCACTCGCTCCGATCTACGTATTGAACCGATCATAGGCCCGAGTCGA
GCTACCAAACGCTCGCCCGCGTACAAAAACAAACGGCGAAGCCGGGTAAA
TACTGAAGTATCGATAATAATATCATCAGCAGCATCAGTTGAGAAAAACA
CTTTTAAGGCGGAAGACCTGCGTCATCAGTACAGCAGGGCGCAGAAAGCT
GCTGGATGTCTGTAATCTACACTACTCCTGGTTGTGGGGGGCGACATTTT
CAATTCCGAACAGCGATGCCTTTGTGCACTGTATTGTGCTGTTGCGATAT
CAGCTGTCATGTTGTGGAAGTCGTCACGTATATAGGTGGGTCAGATCTTT
GGATTTTTTTTGTGAAAAGGCAATACTACTACAAGTACTACTGAAGTCGT
ACTCTGTTGTACTCTCTGTTTTATTTTTAGTTAAAAATACATCAACCGTG
ACGTTCCAAACTGGTTCAGACTCCAGGGGATAATCGTCAAGTTCACTACT
GTGTAATACTTCGGTCGCACGTATTCTATCGTTCCTCAGAAAAGAAATAT
CCTCAGACAAGGTAAAGCGCAGTAGCATGCACTGTTTTTACAACAAATAA
ACGTGAACAGATGATGGTGTAACTTGCCAACAGCAACGTAAAATGTACGT
CATGGCTGAGTTCACACCTCATGCCATTCGTCCACGTCACCATCGGAATG
CTAGCCGTTTACGGTCCAAGCTTTCAAATGCACGGAAAGAGGGAGGGGAT
ATCACGGGCTTTGTACTCGCGTTTGGTAGGGTAAACCGCCTCTGCGACTT
CATCCAGCACGGGAAATATCGATTTGCATACCTTTCCACTTGTAGCACAG
TTTGAACGGACCTTCGCCAGTCTTCTCGTACAGACTAGAGTAGCATACCC
ACACCAAGCTTCCATGCGTGTGTTGAATATTCTCTGCGGATATAACCAAA
ACGTGTTGAGGTCTCTGTCGAACGCTATCGGTGCTCGTTTTATGCTCCGC
GCATACTAGCCCGTCGTTCGCAACGCGCATCCTTCACGAAAAAGTGCGTC
AACAAGCACAGCCACCGCTATTGTGCTACAAGGCAATGTTGACTATAGGA
CGGTGATGGCTGCATTTCTTAACAAAGCGAAGTTGTGCCCACATTCGGTT
CGTCTAGCCCAGATTCGCCATCCAGATTAATATTTGCGCTTGTAGGCGCT
TACGAAACTTACACTGCGATACTTCTATGTTTCACTCTGTTACTTGCTTT
CGTGTTACATTGTCTTTGTTCAAATATTTTTGGTGATCCGCCAGAATTCG
AAGGGAGATCAACGCTATTCAGACCAAGATAAACGCCCTGTCAGTCCCAC
CACAGTCGAAGCTGTCCAAGGTCGTCGCAAACGATGCCCAAGTCAAGGCC
GAGGTGCGGGTGGATACAACCTCAAAGCCTGCCCCGAGCAGATCGTTACA
TTGTTGTTTAGTTACACATGCCAGCATACATCAGCGGCGGCGATCAAACT
GATTCGGGGGCCGGGGCATAGTCACCAACTTCACCTTGTGAAGTATACAC
CAGACATCATTCTACCGTCATGATCATGTATCATATCAAATACCTGGTAG
CCTAATACTGGTATACTGTATTTGTATTTGTCGAGGCGTTTCTGTTCGTA
CTACCACAGAGACAGGTTGATGCGCCCCTCCCAACATGCACTGACATTTC
CATTTCGTCTTGCGGCTGTTGGACGGGATCTTGCTGCAGGAAGACAAACT
CACTGAGGAAATGCACGCCTTGGAGCAAGACTTGGCACGCCTCGAGAATA
TCCCGGACAATAAAATCAAGGCCGTGGTGAGCCTCACCACAAAAACAGTA
GTTAGTATCAGTATCGCAGAGGAGGGGGGGAGGGGGGGGAGGGGGACAAT
GCTTCCCTCACAGACCAACGCAAACTAATGTGACATCGATAGCCTCTCTG
AAACGATGCACTGGTGTAGGATGTCTAGGAACAGCTCGTGTACGGAGCGC
ATGGATTGAGCATGTACGAAGTAGTACACTACCAGCCGAGGGCATCTTCA
ACGTTTGCAGAGGGGTATCGTGTTGCCCTCTCCAAGCCAGATCAGACCAC
CGTACGCGAGGTATCCAACCGTCGAAGGACAACAAAACCACACCCATATG
TTGGCTACGACCGAGTGTACGAGTGTAACGCTTGGGACAACTTAATGTTA
AATTATAACCATGGTTGCCACGTAACTTACCGTGGGCTTTCGCGGTGCAA
ATATTTTATTTCCGCTCTTGACGTGAATCTGTCGGGGGGCTCGGGGGGGT
GCATTGCCCGCTCGCACTTGAACGGGCAGGATGTTTGGGAACATATGAAA
TTCTTGGGGAAGAAGTGTACGCGGAAAGAAGTCACGGACATCGTCTGGGA
GGTGGACGAGAATCTGGATGGCGCGATCGACTGGTACGAGATACCATAAG
ATAAGCTGTAGATGAAAGAATTGTCCAACGTCAAAGGGAGTTGCAAAATC
ATCCCCAGATTGGGGAGGGGATGGTTTGAATTATTCCCCCTATGTATTGG
AGATCATTATGATACCATCCCTTCCCGCACGTTATTCATACATGCCATTA
CTACTGAGAACCGTTCCGACAAAGGGCATGCTGATTTTGTCATGTCATCG
GGAGGGAACTACTTTAAATGTTTTAACCATCCGCTTACTCCATCCAGGGA
TGATTTTGCAGCAACCGCCCCTGTCCCTATCGCTGGAATACGCGAAAGAC
GCTTGATGTTTCATAGTGTTTTCGCACTTCTTGCAGTTACCGGCACGCGT
TGCTCTTGTTTGATGCCAACGATTTACAGCTGCACACAGGCATAGGCGTG
ATGCTCTGATTTTCATCGTGTCCAAACACGGCACAGACCCAAAAACGCTA
CCACGGTATCCATGTTAGATTGTAGATATATAGGTGGCTTTCGCTACAAG
TAGCTACAAGGCCAAGCGCCTCCGAGGTACGTACCGGCGCTGTAACGGCA
ATCAACCATTGTATTGTACAACAACCATACTTCAATCGGCGATCACGACG
CGGTTGGGAGCTGAAGCTTTATCTTTTCCCATCCACCGGATGTAAAAAAA
ACAAAATAGGCCGTATAAATTATCCATCAAAGCCTTGTTTCGTTGTCCTG
GTCACGCACAGGTATTGGTTTGCGTCTTGCTTTGTTTTTAACGTCACCAT
GGGTATGTTGGTTAGGGCCAATCCAATACTAACAGTTGAATACCACCGTT
TGGTTGTGCCCCATCCCTGAGAGATGCCACCATAAAAAATCTCAGCCTTG
TTGTCGCTGCTGTCTTCGCATTGCGCTCGTCCCTCTTGGGTTTCGTCCTC
CAAGGGACGAATTTAGGCTGATGTTCTTCCGCAACATCAACGACCGCACC
GGCCTGGAGCCCGCAAAAATGTACAACATGGTGCAATTTATGCTTTACGA
CGTGGACAACAACGTCAACGTCTCGGTCGACGAGACAATGAATATGCTTT
ATGCAAGGCGAGTACCGCTACTTTCATTTTTTGGCACCGAACGACAACAG
CGGTATGCACGACTGCGCACGCACTGCAAGACGGTGATAAACGCTCCGCA
CTGCAATTCTTGCGTTGTGCCGTAAGTCAGATTGATTAGCATGTCTTCGA
GCTGGTACTTAACATCACAAGCCTCAATCAAGTTTCCTCGTATCTCCATC
TCCATACTCTAGGCGGATGAAACCTTGAGCAAGCGCTTTAATATACCAGG
ATGATACACCTCAATCCGATCACCATGAATCTCTGAAGATAACATCACCC
CCAGAACGGTTTTGGTATCGTACCGCGGCCAGACGATATCTTGTCGCGTC
GCGGTAAACGCATTTGTTTACCTTGTACGGGCTTCGGGGGCGACGTACAC
AACGTCCTCAAGTTGTCTTTGACCAAAACAGGCATCCGGCTCCGGAAACG
TTGTGTTAAACCGAGGCCAAAAACATGGCGTAGTATAGGGACTGACCGTC
TGCAGCAGTAGTGCTACGGTGCCATCATGCGCCTGCCATGTTTCACTTGC
CTCGCGTGTATTGTTTCAGTCGCCAATGTGTCAGAAGATGATTTGCGCAG
TCGTCGCCTCTGAAGCATTTTCGGGCAGATACATCCTTTCCTGCCGTATG
CTGAAAAAAAAGTGTATTTCTGGATCTTGGGTGCTGATTTGTGCCCTTCA
AACACGACGTGTAATAATCCATGAGAGAGCGGTTGGTCACAAATCAGCAA
ACAAGATATCGCGCGTCGTCGTATTGACAAGGCGAGCCCCCCCCCGTCCC
TGTGTTGCATTTCTATTGCAGATACGGGAGAACAAAGATGGAATCGAAAT
TGAAGGAGCTCTTCGGGGAGGGCATGCGAGAGACCGGGACCCAGGTCAGA
CCGCTTATGTTATGAAGCTCTCTGATTGGTTCTTGAAATGTGTCGGGTTT
TGCAATGCCTAGGAGGCGTCTTACCACTTACTTGAAGTAATGTTGGTGGC
GCGTCTAGTAGACATTCTCGTCTCCGAAATGTAGTACCGTAAATCTGATG
AATCTGTAACTCGAGCTCGAACCCACTGTATTATCGAATGAGTAAGGTTC
CACGAGGACAGGAGGGTTTTGGTGTGAACAAGACTGGCGTTTTAGAAGTG
AAGGCAGTCGTGTTTTCCCTTTGCTCCTTTGTTATACGTGGTAAACAATA
ACCTTCGATTCCGTTTGCGCTCGGAGCCCACGCGTCAATTTATAGCGCCA
TACTCAAACATGAAACGTCTCCCACGTAACAGGGTGGAGAGATAGATTTT
TTGGAGTACCTCGAAGCCGTGGAAAGGACGCAGCTCAACACCTTCGTACA
ATCTTCGGTCGGACGGGCGCAGCTGGCAAAGACAGGTCAG
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Coding sequence (CDS) from alignment at D-herbacea_F_contig119:396886..402075-

>mRNA_D-herbacea_F_contig119.1324.1 ID=mRNA_D-herbacea_F_contig119.1324.1|Name=mRNA_D-herbacea_F_contig119.1324.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1542bp|location=Sequence derived from alignment at D-herbacea_F_contig119:396886..402075- (Desmarestia herbacea DmunF female)
ATGGGGGACGAAGATCAGGTGATCAACATCTCCGCGCAGGAGGACAAGGG
CTTGAGAAGGGCATACGATCGTCTTTGCGACTTCAGCCAGAAAGAAAAAT
GGGGGACGAAGATCAGGTGATCAACATCTCCGCGCAGGAGGACAAGGGCT
TGAGAAGGGCATACGATCGTCTTTGCGACTTCAGCCAGAAAGAAAAAATT
CGAAGGGAGATCAACGCTATTCAGACCAAGATAAACGCCCTGTCAGTCCC
ACCACAGTCGAAGCTGTCCAAGGTCGTCGCAAACGATGCCCAAGTCAAGG
CCGAGAATTCGAAGGGAGATCAACGCTATTCAGACCAAGATAAACGCCCT
GTCAGTCCCACCACAGTCGAAGCTGTCCAAGGTCGTCGCAAACGATGCCC
AAGTCAAGGCCGAGGAAGACAAACTCACTGAGGAAATGCACGCCTTGGAG
CAAGACTTGGCACGCCTCGAGAATATCCCGGACAATAAAATCAAGGCCGT
GGAAGACAAACTCACTGAGGAAATGCACGCCTTGGAGCAAGACTTGGCAC
GCCTCGAGAATATCCCGGACAATAAAATCAAGGCCGTGGATGTTTGGGAA
CATATGAAATTCTTGGGGAAGAAGTGTACGCGGAAAGAAGTCACGGACAT
CGTCTGGGAGGTGGACGAGAATCTGGATGGCGCGATCGACTGGATGTTTG
GGAACATATGAAATTCTTGGGGAAGAAGTGTACGCGGAAAGAAGTCACGG
ACATCGTCTGGGAGGTGGACGAGAATCTGGATGGCGCGATCGACTGGGAC
GAATTTAGGCTGATGTTCTTCCGCAACATCAACGACCGCACCGGCCTGGA
GCCCGCAAAAATGTACAACATGGTGCAATTTATGCTTTACGACGTGGACA
ACAACGTCAACGTCTCGGTCGACGAGACAATGAATATGCTTTATGCAAGG
CGAGGACGAATTTAGGCTGATGTTCTTCCGCAACATCAACGACCGCACCG
GCCTGGAGCCCGCAAAAATGTACAACATGGTGCAATTTATGCTTTACGAC
GTGGACAACAACGTCAACGTCTCGGTCGACGAGACAATGAATATGCTTTA
TGCAAGGCGACCCCCCCCCGTCCCTGTGTTGCATTTCTATTGCAGATACG
GGAGAACAAAGATGGAATCGAAATTGAAGGAGCTCTTCGGGGAGGGCATG
CGAGAGACCGGGACCCAGCCCCCCCCCGTCCCTGTGTTGCATTTCTATTG
CAGATACGGGAGAACAAAGATGGAATCGAAATTGAAGGAGCTCTTCGGGG
AGGGCATGCGAGAGACCGGGACCCAGGGTGGAGAGATAGATTTTTTGGAG
TACCTCGAAGCCGTGGAAAGGACGCAGCTCAACACCTTCGTACAATCTTC
GGTCGGACGGGCGCAGCTGGCAAAGACAGGTCAGGGTGGAGAGATAGATT
TTTTGGAGTACCTCGAAGCCGTGGAAAGGACGCAGCTCAACACCTTCGTA
CAATCTTCGGTCGGACGGGCGCAGCTGGCAAAGACAGGTCAG
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