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Homology
BLAST of mRNA_D-herbacea_F_contig1183.1309.1 vs. uniprot
Match: A0A6H5KL74_9PHAE (F5/8 type C domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL74_9PHAE) HSP 1 Score: 167 bits (423), Expect = 9.600e-41 Identity = 180/594 (30.30%), Postives = 257/594 (43.27%), Query Frame = 1
Query: 1 EMFVTTSGTTTDFETYDFDVFTRSVVIAG-YVTGDESINITEAIPLPVFLSLLKA--------------------MTNGFEWWSESDDALDEELEFHLSTWTSLTAVGLH-------------------------------ENTTGWQTFDLQ--LDTDQTVTEVRLVMKGTGSGASGFTSSTQDSWAPVPPTRQTSTMWVLHASMIGRAHSTLILLGMAKATRRPSWGPSAP*RRPRLMA-WTAWEKIPLP---TARQPEVSG---------RY*S*YLPKRDLWALANTSTLI*CLLSKIFSRLFIHHLQLYTVFPLR*LHHSS*TLWVYNILWKHLMDTRTFLCISP*QFLQLREEAFIVVCFRNISTR*TF---------PWASSST*FTTTPGLETWMVTQLWC--VTPRWSASMPASGTKYIVLSPELPT------EQSYEPTS-KMHRALG----NCFS----PSQMYDNGVAGIHIIDSTNFTFDATIGDGDDEGDGYVGSLDGQQPIEVIVESSTRVVFQDMSVRSANDPVMTVSADSSEVFFNNNGFSMVDADTCVIQTGDPSVVT--AEDDELVLVDSCYVKV 1497
E +VT+SGTT +FETYDFDVFT ++I+G + + ++I+I+E F+ L+A T+ F+W ++SDDA+ +EF L+ + + AV + +T WQ+FDL LD DQ +TE+ +V++GTGSGA GF +L ++G A +T W R P +A T +KI + T ++ G + LP+ + N L FS D+ F I + + + +V IS T P S+ T PGL + ++ + +T R + G +V + + E+ Y P S R G +C S +Y+NGVAGIHI+ + NFTFDATIG+ G+G VG+LDGQQPI+VI+ESST V F D+ V+S+NDP+M VS DSS V FNN G S+V+AD CVIQ DPS VT A++DEL L SCYVKV
Sbjct: 624 EAYVTSSGTTDEFETYDFDVFTNEILISGVFTSASQTISISEV----EFMEELQAGEIQISEWNTPLADARVDGPTTDAFDWTTDSDDAIGRTVEFELAWYAMVDAVEIKFPVGDTYKFDLELNDDQIRGEILKTITGFESADTADWQSFDLSQHLDADQFLTEINIVVQGTGSGAPGFA--------------------MLDIRVMGTAIDNPTDTVYVGSTFIERWTGLTD-RYPDFVAEGTGDQKIIMEAICTVKKASFDGVDCVGGDDAATGTVVLPQGSWYVDGNIFMKSGVFLDGSFSE-----------------------------------DSPYFTGIILEEGAAGKTDIDAMVVMDGISNAMTDNIWIRGHYDPDTSNDT--PAVPGLGSTGLSVVGSTNITLRDAEIRFLDGDALVVRDSNMISIDAGEYEELYSPWSLASSRGTGLIVDSCDSIYVRRHTLYENGVAGIHIVGTNNFTFDATIGEESTVGEGNVGNLDGQQPIDVIIESSTLVTFNDLRVQSSNDPIMMVS-DSSTVSFNNLGLSLVEADACVIQADDPSTVTIDADEDELTLDGSCYVKV 1154
BLAST of mRNA_D-herbacea_F_contig1183.1309.1 vs. uniprot
Match: D7FTH1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH1_ECTSI) HSP 1 Score: 161 bits (407), Expect = 1.140e-38 Identity = 183/571 (32.05%), Postives = 253/571 (44.31%), Query Frame = 1
Query: 1 EMFVTTSGTTTDFETYDFDVFTRSVVIAG-YVTGDESINITEAIPLPVF----LSLLK--------------AMTNGFEWWSESDDALDEELEFHLSTWTSLTAVGLH-----------------------------ENTTGWQTFDLQLDTDQTVTEVRLVMKGTGSGASGFTSSTQDSWAPVPPTRQTSTMWVLHASMIGRAHSTLILLGMAKATRRPSWGPSAP*RRPRLMAWTAWEKIPLPTARQPEVSGRY*S*YLPKRDLWALANTSTLI*--CLLSKIFSRLFIHHLQLYTVFPLR*LHHSS*TLWVYNILWKHLMDTRTFLCISP*QFLQLREEAFIVVCFRNISTR*TFPWASSST*FTTTPGLETWMVTQLWCVTPRWSASMPASGTKYIVLSPEL------PTEQSYEP-TSKMHRALGNCFSPSQMY--------DNGVAGIHIIDSTNFTFDATIGDG---DD---EGDGYVGSLDGQQPIEVIVESSTRVVFQDMSVRSANDPVMTVSADSSEVFFNNNGFSMVDADTCVIQTGDPSVVTAEDD-ELVLVDSCYVKV 1497
E+FVT+SGTT FET++FD FT V IAG + +G +SI+I+E + +S++ A T+ FEW SESD+A+D L F L+++ + AV L ++ GWQ F+L D VTEV ++MKGTGSGA GF + +A +G A +T SW R P +A ++ + A + D A S + + IF + ++ L F + +++ + K DT + + +L E V + + + S+ T G +T +T R+++ + G +V E+ P ++ Y P T R G S DNG+AGIH+ S NFTF+ATI D DD EG+G VGSLDGQQPIEVIVESST V FQDM V+S NDPVMTVS SS V F+N GFS V++ TCVIQT S VT DD EL L +CYVKV
Sbjct: 618 EVFVTSSGTTDGFETFEFDYFTDVVSIAGVFTSGGQSISISEVEFVEEIQDGEVSVVDFDAPYDNGDGLWTGATTDAFEWSSESDEAMDRTLSFVLNSYALMEAVELQFPVGETYKFELTLYDDGDEIVSTFTGLESVDSEGWQRFELGT-IDDPVTEVTIIMKGTGSGAPGFK--------------------LANARFLGTAIDNPSNTFYVGSTYVESWRSD---RYPDFVAEGTGDQKAIMGAICAVKKASFDGVDCVGGDDAATGEVSMPMGEWFVDGNIFMKSGVY---LDASFSIDDSPYTTDIILEDGAAGK--TDTAAIIVMDGISDARLSE----VWIYGHYDSE-----TSNDTPAVDGLGSVGLSITGSTNITCRYASVYSSDGDALVVRDSEMVNIDAGPYDEEYRPWTIGQSRGTGIVVDSSDSVWIRRYTTSDNGIAGIHVSGSNNFTFEATIADECWTDDCVLEGEGNVGSLDGQQPIEVIVESSTLVKFQDMKVQSVNDPVMTVSG-SSGVSFDNCGFSNVESGTCVIQTDATSEVTTGDDPELSLDGTCYVKV 1149
BLAST of mRNA_D-herbacea_F_contig1183.1309.1 vs. uniprot
Match: A0A6H5KH45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH45_9PHAE) HSP 1 Score: 156 bits (394), Expect = 4.850e-37 Identity = 188/581 (32.36%), Postives = 242/581 (41.65%), Query Frame = 1
Query: 1 EMFVTTSGTTTDFETYDFDVFTRSVVIAGYVTGD-ESINITEA---------------IPLPVFLSLL--KAMTNGFEWWSESDDALDEELEFHLSTWTSLTAVGLH-----------------------------ENTTGWQTFDLQLDTDQTVTEVRLVMKGTGSGASGFTSSTQDSWAPVPPTRQTSTMWVLHASMIGRAHSTLILLGMAKATRRPSWGPSAP*RRPRLMAWTAWEKIPLPTARQPEVSGRY*S*YLPKRDLWALANTSTLI*CLLSKIFSRLFIHHLQLYTVFPLR*LHHSS*TLWVYNILWKHLMDTRTFLCISP*QFLQLREEAFIVVCFRNIST-R*TFPWASSST*FTT---TP--------GLETWMVTQLWCVTPRWSASMPAS-GTKYIVLSPEL------PTEQSYEP-TSKMHRALGNCFSPSQM--------YDNGVAGIHIIDSTNFTFDATIGD---GDD---EGDGYVGSLDGQQPIEVIVESSTRVVFQDMSVRSANDPVMTVSADSSEVFFNNNGFSMVDADTCVIQTGDPSVVTAEDD-ELVLVDSCYVKV 1497
E+FVT+SGTT FETYDFD FT V IAG T +SI+I+E P + L A T+ F W SESD A+DE+L F L ++ + AV L ++ GWQ F+L D VTE+ +VMKGTGS A GF + +A G A +T W R P +A T Q + G + D +S F+ +F +H + W + D+ I + + ++ NIS R + W + T TP GL T + C+ AS+ +S G +V ++ P + Y P T R G S YDNGVAGIH+ S NFTF+ATI D G+D EG+G VGSLDGQQPIEV+VESST V FQDM V+S NDPV+ VS SS V F+N GFS V+ TCVIQT S VT DD EL L +CYVKV
Sbjct: 434 EIFVTSSGTTDGFETYDFDHFTNYVSIAGVFTSSGQSISISEVEFVEEIQDGEVSVVDFETPYYGDALWPGATTDAFVWASESDAAIDEKLSFVLKSYAVMEAVELQFPIGETYKFELTLYDDEDEIVSTFTGFESVDSEGWQRFELGT-IDDPVTEIAIVMKGTGSEAPGFK--------------------LANARFFGTAIDNPSDTFYVGSTYVTEWNSD---RYPDFVAEG--------TGDQKAIMGAICAVKKASFDGVDCVGGDDAATGEVSMPMGEWFVDG----NIFMKSGVHLHA---------WFSIDDSPYTTDIILEDGAAGKTDTAAMIVMDNISNARLSNTWIIGNYDSETSNDTPTVHGLGSVGLSITGSTNITCI----DASVYSSDGDALVVRDSQMINIDSGPYDDDYLPWTIGQSRGTGIVVDSSDSVWVRRYTTYDNGVAGIHVSGSNNFTFEATIADKCWGEDCVLEGEGNVGSLDGQQPIEVVVESSTLVKFQDMKVQSVNDPVIVVSG-SSGVSFDNCGFSNVETGTCVIQTDTTSEVTTGDDPELSLDGTCYVKV 964
BLAST of mRNA_D-herbacea_F_contig1183.1309.1 vs. uniprot
Match: A0A6H5KFA6_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFA6_9PHAE) HSP 1 Score: 134 bits (338), Expect = 8.620e-30 Identity = 74/121 (61.16%), Postives = 92/121 (76.03%), Query Frame = 1
Query: 1144 YDNGVAGIHIIDSTNFTFDATIGDGD-DEGDGYVGSLDGQQPIEVIVESSTRVVFQDMSVRSANDPVMTVSADSSEVFFNNNGFSMVDADTCVIQTGDPSVVT--AEDDELVLVDSCYVKV 1497
Y+N VAG+HI+ S NFTF+ATI + EG+G VGS+DGQQPIEVIV +S+ V FQDM V+S NDPVMT++ DS+ V F N G+S V + TC IQT DPS VT A++DELVL +CYVKV
Sbjct: 1043 YENAVAGLHIMGSNNFTFEATIASEEGSEGEGNVGSVDGQQPIEVIVGTSSLVTFQDMKVQSVNDPVMTIT-DSTTVSFTNGGYSNVPSGTCTIQTDDPSTVTIDADEDELVLEGTCYVKV 1162
BLAST of mRNA_D-herbacea_F_contig1183.1309.1 vs. uniprot
Match: D7FUI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUI8_ECTSI) HSP 1 Score: 120 bits (301), Expect = 9.870e-26 Identity = 97/288 (33.68%), Postives = 134/288 (46.53%), Query Frame = 3
Query: 378 LLNARFMGSSAANPTDVYNVGSARINDWQSTLYPDFVGDGKSDQEAIMGAICAVKKASFDGVDCVGEDPTANGTA----ARSVWTLLIVISAKTRFVGSRKHVDLNLMSSFEDIFSPFYSPSSTVYCISITIATPLILDPMGVQHLMETSYGYKDILMYIPVT-----ISSTPRGSIYRCMFSQYFHKVNLPMGEFFNIVYNDAWIGNMDGDAVVVRDSQMVSIDAGVWDEVYSFVTRVAYGAVVRTHEQNASCPGKLFFPIPDVR*RRGWHSHNRFHELHVRRNHRR 1214
+L+ +G+ NP+D + VGS I W PDFVG G DQ AI GAICAVKK +FDGVDC+ D TA GT R+ WT S +R+ VD +SS + S ++ P I P+G + + + LM +PVT + S P+ S+ H+ ++P N+ I GDA+VVRDS +VSIDAG +DE + V V Y R + +L P R RRG H+ + ++R NHRR
Sbjct: 131 VLDPMVLGAKIDNPSDTFYVGSTFIEFWSGNGLPDFVGTGSGDQNAINGAICAVKKGTFDGVDCIDMDETATGTVDLSWVRTSWTATSSCSLAFSSSANRRRVDPRELSSRDR----HRQQSRRIW--------PRIDLPLGCE--LPDFVVARLTLMEMPVTAFSASLHSLPKASLCLVPSVPPLHR-SMP-NTLQNVTCEGVDIRYCSGDALVVRDSTLVSIDAGRYDE-HEGVPSVDYRPKPRHRSDSRHVGLRLSSPAHVTRQRRGGSPHHGLEQFYLRSNHRR 401
BLAST of mRNA_D-herbacea_F_contig1183.1309.1 vs. uniprot
Match: D7FZZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ4_ECTSI) HSP 1 Score: 106 bits (264), Expect = 1.710e-20 Identity = 75/231 (32.47%), Postives = 111/231 (48.05%), Query Frame = 3
Query: 363 GVRVYLLNARFMGSSAANPTDVYNVGSARINDWQSTLYPDFVGDGKSDQEAIMGAICAVKKASFDGVDCVGEDPTANGTAARSVWTLLI---VISAKTRFVGSRKHVDLNLMSSFEDIFSPFYSPSSTVYCISITIATPLILDPMGVQHLMET-SYGYKDILMYIPVTISSTPRGSIYRCMFSQYFHKVNLPMGEFFNIVYNDAWIGNMDGDAVVVRDSQMVSIDAGVWDE 1043
G L++AR +G+ NPTD + VGS I +W PDFVG G DQ AI AICAVKK ++DGVDCVG D +A GT + + + F+ R D + + DIF +P +T + +++D + + + +G +Y P T + +P + + + NI D W+ DGDA+VVR S +V+IDAG +DE
Sbjct: 633 GSEFPLIDARILGTKIDNPTDTFYVGSTFIPEWYGHGDPDFVGQGTGDQNAINAAICAVKKGTYDGVDCVGMDDSATGTVVLAFGEYHVDGNIFMKSGVFLKGRYRFDDSPYNI--DIFLEEGAPGNT------DVDAMIVMDGISDARIGDLWIHG-----LYDPDTSNDSPA--------VPGLGSTGVSIVDSQNITCADTWVDFCDGDAMVVRSSSVVNIDAGYYDE 842
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 9 |
| Model size | 1497 |
| Cds size | 537 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927574.1607518-UTR-D-herbacea_F_contig1183:14047..14119 | 1622927574.1607518-UTR-D-herbacea_F_contig1183:14047..14119 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig1183 14048..14119 - |
| 1690790240.2124853-UTR-D-herbacea_F_contig1183:14047..14119 | 1690790240.2124853-UTR-D-herbacea_F_contig1183:14047..14119 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig1183 14048..14119 - |
| 1622927574.1769288-UTR-D-herbacea_F_contig1183:14285..14377 | 1622927574.1769288-UTR-D-herbacea_F_contig1183:14285..14377 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig1183 14286..14377 - |
| 1690790240.221333-UTR-D-herbacea_F_contig1183:14285..14377 | 1690790240.221333-UTR-D-herbacea_F_contig1183:14285..14377 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig1183 14286..14377 - |
| 1622927574.1971917-UTR-D-herbacea_F_contig1183:14569..14860 | 1622927574.1971917-UTR-D-herbacea_F_contig1183:14569..14860 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig1183 14570..14860 - |
| 1690790240.2292776-UTR-D-herbacea_F_contig1183:14569..14860 | 1690790240.2292776-UTR-D-herbacea_F_contig1183:14569..14860 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig1183 14570..14860 - |
| 1622927574.2154555-UTR-D-herbacea_F_contig1183:15156..15257 | 1622927574.2154555-UTR-D-herbacea_F_contig1183:15156..15257 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig1183 15157..15257 - |
| 1690790240.240023-UTR-D-herbacea_F_contig1183:15156..15257 | 1690790240.240023-UTR-D-herbacea_F_contig1183:15156..15257 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig1183 15157..15257 - |
| 1622927574.22945-UTR-D-herbacea_F_contig1183:16648..16990 | 1622927574.22945-UTR-D-herbacea_F_contig1183:16648..16990 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig1183 16649..16990 - |
| 1690790240.2479663-UTR-D-herbacea_F_contig1183:16648..16990 | 1690790240.2479663-UTR-D-herbacea_F_contig1183:16648..16990 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig1183 16649..16990 - |
| 1622927574.2443957-UTR-D-herbacea_F_contig1183:17048..17107 | 1622927574.2443957-UTR-D-herbacea_F_contig1183:17048..17107 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig1183 17049..17107 - |
| 1690790240.2624257-UTR-D-herbacea_F_contig1183:17048..17107 | 1690790240.2624257-UTR-D-herbacea_F_contig1183:17048..17107 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig1183 17049..17107 - |
| 1622927574.3149734-UTR-D-herbacea_F_contig1183:23849..23852 | 1622927574.3149734-UTR-D-herbacea_F_contig1183:23849..23852 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig1183 23850..23852 - |
| 1690790240.310423-UTR-D-herbacea_F_contig1183:23849..23852 | 1690790240.310423-UTR-D-herbacea_F_contig1183:23849..23852 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig1183 23850..23852 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927574.259098-CDS-D-herbacea_F_contig1183:17107..17213 | 1622927574.259098-CDS-D-herbacea_F_contig1183:17107..17213 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig1183 17108..17213 - |
| 1690790240.2721992-CDS-D-herbacea_F_contig1183:17107..17213 | 1690790240.2721992-CDS-D-herbacea_F_contig1183:17107..17213 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig1183 17108..17213 - |
| 1622927574.269773-CDS-D-herbacea_F_contig1183:17386..17554 | 1622927574.269773-CDS-D-herbacea_F_contig1183:17386..17554 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig1183 17387..17554 - |
| 1690790240.2801077-CDS-D-herbacea_F_contig1183:17386..17554 | 1690790240.2801077-CDS-D-herbacea_F_contig1183:17386..17554 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig1183 17387..17554 - |
| 1622927574.28459-CDS-D-herbacea_F_contig1183:17828..17967 | 1622927574.28459-CDS-D-herbacea_F_contig1183:17828..17967 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig1183 17829..17967 - |
| 1690790240.2905815-CDS-D-herbacea_F_contig1183:17828..17967 | 1690790240.2905815-CDS-D-herbacea_F_contig1183:17828..17967 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig1183 17829..17967 - |
| 1622927574.297981-CDS-D-herbacea_F_contig1183:23725..23849 | 1622927574.297981-CDS-D-herbacea_F_contig1183:23725..23849 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig1183 23726..23849 - |
| 1690790240.2993376-CDS-D-herbacea_F_contig1183:23725..23849 | 1690790240.2993376-CDS-D-herbacea_F_contig1183:23725..23849 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig1183 23726..23849 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig1183.1309.1 >prot_D-herbacea_F_contig1183.1309.1 ID=prot_D-herbacea_F_contig1183.1309.1|Name=mRNA_D-herbacea_F_contig1183.1309.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=179bp
MFVTTSGTTTDFETYDFDVFTRSVVIAGYVTGDESINITEAIPLPVFLSL
LKAMTNGFEWWSESDDALDEELEFHLSTWTSLTAVGLHENTTGWQTFDLQ
LDTDQTVTEVRLVMKGTGSGASGFTSSTQDSWAPVPPTRQTSTMWVLHAS
MIGRAHSTLILLGMAKATRRPSWGPSAP* back to topmRNA from alignment at D-herbacea_F_contig1183:14048..23852- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-herbacea_F_contig1183.1309.1 ID=mRNA_D-herbacea_F_contig1183.1309.1|Name=mRNA_D-herbacea_F_contig1183.1309.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=9805bp|location=Sequence derived from alignment at D-herbacea_F_contig1183:14048..23852- (Desmarestia herbacea DmunF female)
GAGATGTTCGTGACGACCTCTGGAACTACCACCGACTTCGAAACGTACGA
CTTCGACGTATTCACAAGGAGTGTCGTCATCGCCGGCTATGTCACCGGCG
ACGAGTCTATCAACATCACGGAGGCCAGTTAAAAATAAAAGTGCAAAACA
AAGATGACTTCACACTGTACCACTTTATGGTTCCCATCTTGTGAGTTCTT
TCAATCAGTTTGGATGCAATAATTAATCTTAATACAAAACGCACAGCCGC
TGTTCGGTGATTTCTTATTTATCTCAACTTCTGCTTTTCACAACAGGTGG
AATTTGTAGAAGAAATCCAGGCCGGGGAGATCCCTGTGAGGGCCTTCTCA
ACGCCGTATGAAACCGGGGACAGCTCGACCGACAACGTAAGTATCTCCAT
GTGAAGAAACTTCCAGTTATGTATGTATGTATGTATGTATGTATGTATGT
ATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTAT
GTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGT
ATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATCTAT
GTATGTATCTATGTATGTATCTATGTATGTATGTATGTATGTATGTATGT
ATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATTATTATTA
TGTTTATGTATGTATTATTATTATTATGTTTGGGTGCGGCAGCTTCGTCA
GAGGCCGAAAGAGAAAGAAGGCTGACTCAAGACCTTTATATATTATAGAA
CGAGAAGATAGAGTGAGCAGAAGACACACGTGGAGAGACATAACGATTCT
CCATCCATCTGCCTAGTATCCCAATCATATATATACCAAACCCCGTACAT
GGCGGTTACACGGCATCGAGATCCCAGGACCCCCAAACATCCCCCTCCTG
GGTTCGAGATGCTATGTCAGAAACTCTTCATGGATTGCCAGGTAAAACGG
CAAAGCATTCAAATCCCAAACCCAAGAATCATCCATCATTCCAATCCCAA
ATAGATCTCTCAACAAATCATATCAATATATTTAATACCCAGATTTAAGA
TCACTCCAGTAGTCCTTTGTCATCCATCAATTTAACACGGTCCCCCCGCA
GGATATCGTTCCAAAGTCTTCAACAATATACCGTTCCTTTTATCAAAAAT
ATCTAGACATTTAATGGTCCCCCCTGTACCATTGTTTCTCTTCAAACGTA
AAACGTATCAAATAAATCTTTGAGTCATCTTAGATATCAAAACGCGGTTA
TCCAAACATGCCTGTTAGCACCTATCCTCGGGGGCACGCGCAAGTTGAGA
ACAGGACATATGGAGTTTTCTCCCGGTCTGCGGTAGAACGCGTCAACACA
AACAAGCATCACAATACAAAATTGTTTGTGCTGTATGGCGATGAATATGG
TAGTACAGTCCAGTACAACCCCCCCCCATGGTCGTCGACATCACAGGGCA
AACAAGCTTACGAATTATTCCTTGACACAGTACATCAATCGAGGATTTAA
TACAGTACTGGCATTGTATCAATCGTTTACCCTTGGGGGCATTGAAACCA
GGACATGTAGGCATGCCTGTTAGCACTTACTAACGGGGGCACGCACAGGT
TAAAATCAGGTCATATGGAGTTTCCTTGTGCTGCGGCGAACATCATGGCA
TACAAATCATGGCATTTGTTCCCTCCCCCCATGATTTTTGATAGACGATC
AGCTGCGGTTCTGCCCAAACATAGAAGAAAATAAGTCAACAAGAGTAGAC
GCGGGCTGCGACACAAGGATAAACTCCTAGAATAGAGAGAATTTGGCCTC
CCCGCTGAACGAACATGTGTTACACAACTTCGAAAAGCAAGAATAGTAGA
AATTGAAGAAATAATTGCGGCACACCACAGTAACAAGAATCAACGAATGT
TCATCACAAATTACGATGCGCGCAATAAAATCTTCTTGTTCTCTTTAAGC
AATATGTTTAAACTATACTATATTTGGCTCCCTCCCAGGGTCAGACAACT
TGCACGTTAATACCATGAAAACAAAATCAAAATAGGCAAGAGTTGAAAAC
CCAGAGTATGAAAATATTAATGCCAAAGGAAACGTTCATTATTGGTACTG
CTCTTGTTTTAGTACTGTACTGTAATCAGATATCAAAACAACCAAGAGCC
CCTTGCAGTTACATGTCCCGAAGGCAAAATTACAAATCATCATTGACTAC
TGCTACATGCTTGACTACCGAATAGTCAAGTACGGATATTATAGAATACA
GTATGGATACTTTTCCTCCCCCGCAAATCCGCGAACTACTCTAACACGCG
ATTCTTCAATTATTTTCGCGAGTCCTGTTCTCGCGAACACTAACGCGGCT
TCGTTTGTCCAGTGTTCTAGATACAAGCCAAAAAAACATTTAGACCTCAC
CAGAATCGGCCCTCCATGCTGAGCCCTCCGACAAAAAAGCCATACCACTC
TAGCTTGCTGTTCCAGCCCCTTGGCGCTGTCCCAGCTGTATACTCGTTTG
CTGTTCCGGCCTCCGATGACCGCCGTACCAGCTCTACCATTCCTATTGCT
GTCTCCGTCTCCTTTTCGACCACGGTCCCAGCTTTATTACCATACCAGCT
GTCTCGTTCCCATTGGCCACGATATCAGCTACGCCATACCTGCTGTTTCG
TCCCCATTGGCCACGAATTTAGCTACGCCATACCCGCTGTCTCGTCCCCA
TTGGCCACGAGTTCAGCTACACCATACCCTTTGTTTCGTCCCGATTGACC
ACGAATTCAGCTACGCCATACCCGCTGTTTCGTCCCCATTGGCCACGAAT
TCAGCTACGCCATACCACTCACACAGATGTCGCCCCATTGGCCCGACACA
TACATCCTTCCAACGCCAATACCTGCTGCCTACACCATGTTCGATGTATC
GTGTTTGGGTGCGGTAGCTTTGTCAGAGGCCGAAAGAGAAAGAAAGCTGA
CTCAAGACCTTTATATATTATAGAACGAGAGGATAGAGTGAGCAGAAGAC
ACACGTGGAGAGAAATAACGATTCTCCATCCATCTGCCTAGTATCCCAAT
CACATATATACCAAACCCCGTACATGGCGGTTACACGGCATCGAGATTCC
AGGACCCCCAAACATATTATGTATATTTATTAAATGTATGTATGTATGTA
TGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATG
TATTCTATGCACATAACCGCGCAATGGCCCTGTCATGTATATTTTATGCC
ATTTATTAAATTGCACATAACCGCGTGTCCGGCCCTGTCATCCTAGTCAT
TTTATGCCATTCGTATGTATGTATGCATATTTATTAAATTGCACATAACC
ACGCAATCCGGCCCTGTCATCCTAGTCATTCTATGCCACTCGTATTGATC
CTCCAAAGGGGGAATCAATGAAACTTATGTATGTATGTATGTATGTATGT
ATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTTGCATT
AAATTGCCATAACCGCGCAATCCGGCCCTGTCATCCTAGTCATTCTATGC
CACTCGTATTGATCCTCCCAAGGGGGAATCAATGAAACTTATTACGAAAA
TCTCTGATCAGACGCGACAAAGGGGACACACTCTCTCTACTTGTACAGTT
CTTACTTAAGCCCAGAGTACCTTGTGCTCCCCCCTGATTCCTTGTTACTC
TCTAGATTATCTGAATTGGCAGCTACAGGGCCAACCCTTTCTTTTCTTTT
GTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGT
ATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTGTATGT
ATGGTCATCACATATAGCAGAGTATGGATCAACCAGGTAAGGTTGCCAAT
CCTGCTCGTGGTCAGCTGAACAGGAAAAAAAATATTGCCCTGTCCCCGTG
CGGGCCTGAGAATTTGGTCTCGCGAAACGGATTCAGCCGTCCGGCCCCGC
GTCAGCCTTCTCATCTCCATACTCAGGCTGAATCTGGTGCTTACTTACGG
GATTCCTCCCGAGATCCGCGGCGGCGTCCATTTATGAAACCGTCATACGC
CATCGGGTCAGTCCCATGTTTATCGGGTCACGCAATTGCGTACCGATGGC
GTTCACTGCCGAGAGGTCGCCAGCACAGGGCCAGTAAACCTTAAGGTAGT
TCCGAACGAGTGCTGCCTTGGCAGGTCACCATGGACCAATTAATATGCGC
CTCTCTTTCCCACCTCCACTATTGGTATGAACTGGGCATGTTCAATATAC
CGGCGGTGTCATAACTGGACCAATGAAACCGCAGTTTGTTAATCTACGGA
GACGCCAAGATTTCTTTCCGGCGAGCGATAGCGAGCTCCGTTCACACTTG
TTATTAGGAGTACGAGCATTCCTTTTTCAAAAACAAAGCAATTCTGAGGA
CGAGATGTGCCCAAGGTAGGCATCATTTTCAAATTGATATTCACACGGTG
GGCCTAATTTTTAATTTGATGTGCCCAAGGTGGGCCTTATTTTCAAATTT
CAAACTAGCGGCGAGCGATAGCGAGCTCCGTCCACGCCGCAGCGGTGGGG
CCCGCCTAGCCTGAAGACCCTTCCGGCGCGCGATAGCGAACTCCGTTCAC
GCATGTTTTCAGGAGAAAGAACATTCTTCTTTAAAAAGAAAAATGAAAAA
AAGCAGGGGTACTCGAACTCACTTCTAGAGGACTACAAAACGTTCTCACT
GGTCCACTACGCCACGGTGGTGCCAGTACTACTTGCTGTAACGCACTTTT
GACTTTCTGTACCTAACAGAGGGGAAAGAAAAACAAAAAAATGGGCACAA
TTCCTTCTGCAAAAACAAAAAAACATGGAGCAAGGCGCGTAGAGGAGGTT
AGACTCAGGCGGTTTGCGTTACAAATTAGACAGCGGTTGGCACAGTGGCC
ATTATCGAGGGTGAAAGTTCTTCATCGTCGTGTGGTACAACGCGACAGTC
ATTGGTTCGGTTATAAAAATGAAAACACGTCACAAGTTTGTGTTCGTTTT
CTTATTTTCGAACCCCGGCTGATACGTCAAACAAACATCGAAAGGTGTAG
ACTGGCGCCAGAATATATGGGATCAAATACACACACATCCCAACCCACAC
AGCTGACGATGGCTACAAATATCATCGAACGCGAGATCGTAGCAACAGCT
ATACTATCTTAATAAACAGCTCGTACACACAGCAACTCGCATTCATTCTG
ACCACCAAGGAATCAACCGCTGCGATAACATGGCCCTGGCACAATGCTCT
ATGTTTCAGGGTATTTCTGTATCACACACATACATGTCCACTACATACCA
ACTACTGTGGGCGTGAGAAGAATAAAGGCGCATAAAAATCGGTCCATATG
GTAAAACCTGAAGAGGCAGCACCCGTTACCCGAACTGTCTTGAGGTCTAC
TGGCCCATTGCCGGGGGACTCTTGCCGGTGGAGGTCATCGGTATGCAACT
GCGTGATCTTTTTGACTCTGGACTGACCCGATGTCGGTTGACGGTTATTT
GTGGACGCCAAGAAGCTGGAGGAATCCCATGAGAAGTATGCACCAGGTTC
AACTATACCGCGGAAGATAGCCGGATGACGCAGGACAGAGCAGCCGAACC
TGTCTCGCGAGACCAAATATATTCTCAGCCACTAACGGGGACGCGAAAAA
ATGCAATATCTTTGTTCAGCTGATCGCGAGTCAGATTGGTGTAGCCATAC
CCGACTCATCCATAATCTGCTGAAAATGCTAGCCATTTGTGGAAGAGATA
TTTTCCATGGTATTTTTCCTCATCAATTTTGTAAGTACCCCTTCCTGTAT
TTTTGTCGCTTTTAAAGGCGATGACAAATGGATTCGAGTGGTGGTCGGAG
TCAGACGATGCCTTGGATGAAGAGCTGGAGTTCCATCTAAGCACTTGGAC
CTCATTGACGGCGGTGGGACTGCAGTTCCCCACTGGAGACACGTACCTCT
TCGAGCTTCACCTCTACACCGAAGCGGATGGTGGAGACGACCCCTTCACA
ACCCTTACAGTGAGGCTACAGAAGTTAATGTTAGGAGTGACTTGTGCATT
TGAATCCGATGTCGCCGCTGTTTGGACGCAGGGCACTTCGGCTTGCGTTT
CAAGCTCTCATGCCCTCTTAAGTAGCCCAAACCAAGCTATCTACGTTCAA
TTGTATCACTCTATATTGCTGCCGGTGTATACGGCAGGGGTTGGAGAGCG
AGAATACCACCGGATGGCAAACCTTCGACTTGCAGCTTGACACCGATCAA
ACCGTGACGGAGGTTCGCCTCGTGATGAAAGGAACTGGCTCAGGGGCGTC
AGGGTTTACCTCCTCAACGCAAGATTCATGGGCTCCAGTGCCGCCAACCC
GACAGACGTCTACAATGTACGTATAACCTCGTTTTGACGTTTTATTGGTG
AAGTACAATGGTGAAAACATTGGCGCAATTGTTAATACGAGTTGTCAAAG
TCTAGGGAGTGTGTCGGACATCTCTAACGGCATTCCATTCATTCCTCTGT
TTGGTGTCCTATCTGGATAAAAACGGCGCACATTTTTAGGTGGGTTCTGC
ACGCATCAATGATTGGCAGAGCACACTCTACCCTGATTTTGTTGGGGATG
GCAAAAGCGACCAGGAGGCCATCATGGGGGCCATCTGCGCCGTGAAGAAG
GCCTCGTTTGATGGCGTGGACTGCGTGGGAGAAGATCCCACTGCCAACGG
CACGGTAATTTGATAAATATAGTGTACTTGGACATACCACTTCTTCCTGT
ACATCTCAATAGGCAGCCAGAAGTGTCTGGACGCTACTAATCGTAATATC
TGCCAAAACGAGATTTGTGGGCTCTCGCAAACACGTCGACCTTAATCTAA
TGTCTTCTTTCGAAGATATTTTCTCGCCTTTTTATTCACCATCTTCAACT
GTATACTGTATTTCCATTACGATAGCTACACCACTCATCTTAGACCCTAT
GGGTGTACAACATCTTATGGAAACATCTTATGGATACAAGGACATTCTTA
TGTATATCCCCGTAACAATTTCTTCAACTCCGCGAGGAAGCATTTATCGT
TGTATGTTTTCGCAATATTTCCACAAGGTAAACCTTCCCATGGGCGAGTT
CTTCGTGAACGGCAACATCTTCATGAAGTCAGGCGTCCTTCTAGATGGAC
GGCGAGTAACGCTCGCTGCGCATAAACCAGAAACCCTTGATGACATAGCT
AGGGCTGGTGTTAGTACACCAGAGAACAATTGTATTCTTGTTGATTAATG
TAACCCCTGCATTGAGTGCCCATAGCATGTGTCTGACCATGTGCCGCCCC
CGTGAGTAAACCACAACCCACTGTCTTGTCCGCACGATATTTTAATACGT
ACAGTGCATCCCTAGACGACTCTCCCTACAATACGGAATTCATCCTAGAT
GACGGTGCAGCCGGCAACACGGCCATCGATGCCATCATCGTCGTGGACGG
GGTGACAGACGCAGAGGTGAGTTTGCTTCCAATGAAGGAGTGTGTTTGAA
CATCATCTATCCTGAGATCATTGCAACCCACCATGAACATCAGCACTGTG
CATCGCGCCCTCTGACTGTATTAGCCTTAGGGCCGGGCTTATCCAGCCGC
AATTTTTGAATAATCGTTTAAACTTTTCAATGAATTTTGAAACCGTACAC
TATTTGGAGTCTTTCTTTAAAGCATTGCTGAAAATGAATGACACCCAGAA
CTAGGCTGAGGTTCAATTTTAGCATATCGTGAAATATACGGGCACAAGCT
TGGGGCGCTCTATAAGGACACCGGTCACGTGTACCGTCTTGCGCATCACC
CCCAGACTCCACAGTAGATTGGCCAGGGTAACTCCAAGGCCACTCCAAGG
CCATGGCTGATAGGAGGAGGCGTCGAGGGTCTGCTGGATTGTGTATGCCT
TATTCAATTGCTCAATTATGCAACTACAGACATGGTATAAACGGATCTTT
TAAATATTCAGACTTGCAGTTTTTCGTCCTGATTTGTCAAGATCAATGAA
ATCTGGATCGAGGGACTCTACGACCCTGATACAAGCAACAATGTGTCTGC
CGTGGCCGGTCTGGGATCCACCGCCATCTCAATCACCAACTCTCAAGTGA
GTGCTGCGTAGTTGCCTTAGTCCGGATATGGTGCGACTCTCAAGTGAGCG
TACTGCGGGAAATCGAATGGTGGGTAGTAGTGAGGGTGGCAGTTTCGGGA
ACCTGGTTGCCGTGCCGCTGGACTGCCGTAAACATAATATTTTTAAATCT
CAGTTTTATAAGTGTACCTCAGTAGAATACCGTTAATTTCTCAAGAAGTA
CAGCAACCACCGTGGAACCTTGCGCCATCTTACAGTGTTTATAATTCTTC
GCAGATTACATCATGGCATCAAAAGAACGGTTTTCGTGGTTCGAAATGAT
GAATGCTGATGTGCCGACTTCCTTTTTGTTCTCGTCATCTATCTTCCCCG
TGATATTCGACAATTGGACGTTCTCAATTTCTTTCATTTTACCAGAACAT
AGTTTACAACGACGCCTGGATTGGAAACATGGATGGTGACGCAGTTGTGG
TGCGTGACTCCCAGATGGTCAGCATCGATGCCGGCGTCTGGGACGAGTGA
GTGTATGTAACATCGTTGCGTTGTTGTGATGTTTACATGTGACAAGGGGG
AAAGAGATAGCCTTACTGTCTCCACCCTTTTACAAGCGCTTGAACTGCCT
GTGCTCCGCATCCCTCGCCCCGGATTTGGCAGCGAGTACAAGCCGTACAG
GATTGCATCAAACCGCGGCATCGGGCTTTTGGTAGATGGCAGTGAGAACG
TCTACGTCCGCCGCCACGCTGTGAGTATGCCCATTTGTACATACAATAAA
AATGGTCAGTATCCCGTTTTCCACTTGACCTTGTGGCTTGAGAGTATATA
GTTTTGTCACCCGAGTTGCCTACGGAGCAGTCGTACGAACCCACGAGCAA
AATGCATCGTGCCCTGGGAAATTGTTTTTCCCCATCCCAGATGTACGATA
ACGGCGTGGCTGGCATTCACATAATAGATTCCACGAACTTCACGTTCGAC
GCAACCATCGGCGACGGGGATGACGAGGGTGATGGGTATGTGGGATCCCT
CGACGGTCAGCAGCCAATCGAGGTTATTGTGGAGTCTTCTACCAGAGTGG
TTTTCCAGGACATGAGCGTCAGGTCCGCCAACGGTGAGAACATGCTGCCG
CAACCCGGATTCTGCTAGTCCTCCTGCTTTTACATATACTATCTGGTCGG
TGGTGCGACGAAGAAAAGTTTAAAATGCTTTGAATGCCAATTCGAGCTAT
CTGATCGTGTACGGTTCACATTATTACATTGTTTGTTCTTACTTGCCCTC
TTGTTTGTTTTTGTATGCCACGTAGATCCGGTCATGACGGTTTCCGCTGA
CAGCTCTGAGGTGTTCTTCAATAACAACGGTTTCTCCATGGTCGACGCTG
ATACTTGCGTCATCCAGGTAAACCCGGTACCGCCAATGCGCTTATAATCG
ATGTGCACCCTCGTTCTCGTTGCATGTTTGAGGCAAAATATCGAGCTGGA
AGCCTTCCACAAAACGATATTATCCTAATTCTGCGTGACTCACACGTTAC
TGTTCACTGTCAAATTAATTGCTTTTATATCAGACCGGGGATCCTAGCGT
GGTGACTGCTGAGGACGATGAACTCGTGCTCGTGGACTCCTGCTACGTCA
AGGTC back to topCoding sequence (CDS) from alignment at D-herbacea_F_contig1183:14048..23852- >mRNA_D-herbacea_F_contig1183.1309.1 ID=mRNA_D-herbacea_F_contig1183.1309.1|Name=mRNA_D-herbacea_F_contig1183.1309.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1074bp|location=Sequence derived from alignment at D-herbacea_F_contig1183:14048..23852- (Desmarestia herbacea DmunF female)
ATGTTCGTGACGACCTCTGGAACTACCACCGACTTCGAAACGTACGACTT
CGACGTATTCACAAGGAGTGTCGTCATCGCCGGCTATGTCACCGGCGACG
AGTCTATCAACATCACGGAGGCCAATGTTCGTGACGACCTCTGGAACTAC
CACCGACTTCGAAACGTACGACTTCGACGTATTCACAAGGAGTGTCGTCA
TCGCCGGCTATGTCACCGGCGACGAGTCTATCAACATCACGGAGGCCATA
CCCCTTCCTGTATTTTTGTCGCTTTTAAAGGCGATGACAAATGGATTCGA
GTGGTGGTCGGAGTCAGACGATGCCTTGGATGAAGAGCTGGAGTTCCATC
TAAGCACTTGGACCTCATTGACGGCGGTGGGACTGCATACCCCTTCCTGT
ATTTTTGTCGCTTTTAAAGGCGATGACAAATGGATTCGAGTGGTGGTCGG
AGTCAGACGATGCCTTGGATGAAGAGCTGGAGTTCCATCTAAGCACTTGG
ACCTCATTGACGGCGGTGGGACTGCACGAGAATACCACCGGATGGCAAAC
CTTCGACTTGCAGCTTGACACCGATCAAACCGTGACGGAGGTTCGCCTCG
TGATGAAAGGAACTGGCTCAGGGGCGTCAGGGTTTACCTCCTCAACGCAA
GATTCATGGGCTCCAGTGCCGCCAACCCGACAGACGTCTACAATCGAGAA
TACCACCGGATGGCAAACCTTCGACTTGCAGCTTGACACCGATCAAACCG
TGACGGAGGTTCGCCTCGTGATGAAAGGAACTGGCTCAGGGGCGTCAGGG
TTTACCTCCTCAACGCAAGATTCATGGGCTCCAGTGCCGCCAACCCGACA
GACGTCTACAATGTGGGTTCTGCACGCATCAATGATTGGCAGAGCACACT
CTACCCTGATTTTGTTGGGGATGGCAAAAGCGACCAGGAGGCCATCATGG
GGGCCATCTGCGCCGTGAGTGGGTTCTGCACGCATCAATGATTGGCAGAG
CACACTCTACCCTGATTTTGTTGGGGATGGCAAAAGCGACCAGGAGGCCA
TCATGGGGGCCATCTGCGCCGTGA back to top
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