mRNA_D-herbacea_F_contig117.1223.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig117.1223.1 vs. uniprot
Match: D8LU88_ECTSI (Ubiquitin domain-containing protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU88_ECTSI) HSP 1 Score: 1276 bits (3301), Expect = 0.000e+0 Identity = 936/1950 (48.00%), Postives = 1071/1950 (54.92%), Query Frame = 1
Query: 1 GMIEELEGRITKARKALLAGPACLDEQSQNVKMLISDQLPRAVEELQRRPMSTVAARRTVAFFAVVQDFVDTCLRSNLLGEGLLRLDLGPVLYVLRCLLSAEPVPPRYALHGAQACMPPPHYFNRDHGRPLLRVFRGCSKTIWPDDQESARVGPDAIGWRIEVFDVHGQLARYRRPEPPSDDAK--WTPSASDANKWHLVTVIGRCPPLSADPDANKQSGPGQV----RQEKQVEESA--------------AVGRETETEPLRVDSSSSVFLIEFDGDRKASLDLSHFSIKWVSFSEMNEDNQHGGLLAQNNGGGEGSVGRTSANVADGSVRLANDDTDVGTRVDVWWPRYNSYFRATIKRYDASQGTHTLHYEDGEVRDSDMSKRGFRVCRAPKQQXXXXXXXXXXXXXXXXASGLDATSLAGQHAQSSPSRKRHVSLAPRPPAEYAPDTSAYVIAALNRFGEAGGMAPLAQRLSSGRAPFNEVLETFRLAKALRTHASSRAMKEVNWTLKECAAGALLSVAPESLRATTKADIAECLSSVKDLALTGSGA-KAAANPPLVLVQELEQLELGMAMKVFCCPSLERRLAGLMHICGLVTLAKQREGPATNYAPXXXXXXXSGESGRSAWVTAEAMEEWLVEGGFLEELFGSRMHVELAKRSEPILTFLAKRNAISTSQLDLLWSSTLGKHEAVVRVMCNVVVNLVPFLSPHKRLHLFSCVAQTPFYRYTEQTLDLVYLFTVKALEAHRTMKL-PAGKVGDDTGGSAHPSAPAGDDSAXXXVAAGGKGGLRRGQVLHCREREWMGYGYGLLWLFVQDSRDQVTGGGAXXXXXXXAGVKGGVSAKLTSMAAGYLVSLLKEPEVAQELWPLITGCVDNVVARRSVPSSLEVLRRAIATLPAHEAKSWFGGSRSKEHSVPGALEALQRTHKLLPALLEELEGYHAAVALHYGRTVGLFLGNGTVTGSXXXXXXXXXXXXXXXXXXXXDPRRDHARSGGGSGXXXXXXXXXXXXXSPPGASMSAATDVLAVDQSRGRGXXXXXXVVRGAGLSEQVQTVLNYGRVRVDGVTTRYSHLQHVKARLDFLMFAVTNSSLSLSEAHIDLVWRVLVEEALTPEAADLALTWMRQACATVGDASTPLQAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAGRCARGTXXXXXXXXXXXXI*GFFYTFLLDYGAPLDPGLVGPLPALPEAVLTYLFENKLAAVSFDGYGVRPQVAVLFRLLFVHVNCRTKAIRREVKVGSGGGGASA--------------GGSAGAESALAHGTALEGWTRHGMELDGLDTLWEIVLNATGSQASRTVSALIVELHWRLGPKLKSKAAKIGAGFVDTCLGRMRASVSRIRALRAALAAESGAAGPGRDDGGDGDGAETDTSAGAEARLAAAANGARSGSR--RTRSSSLPPQK--ERQSRR--GSRSRASSVEGRDLGRAEELERERAAR---DAGR-----------LPSPRAEISSLHRRIGRCILLLARFVDRGKEDDTKTNTGVTATVRVLVQVGPDRVPALEVRLPASSTLGDLRREVARRFRVPWDALELVREVRRKGNTVAEKLEQDGASLEDIGLVAAGA----------IHPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLSSATSANGVPASPPVVEILARMVGEGPSRGGGVGSAAXXXXXXXXXXXXXXXXXVGRGAAAXXXXXXXXXX------------------------------------------------DLIDMDDLLEGWEEDEDPSRWASLTMPSEFPGAVNVLCKGRYRWGRPPPYSQQTAGE----TGLLLSAGCAMSGAAVQMADAACSSGGALGSGSXXXXXXXXXXXXXXXQETAEIG-SKRLSFRLPSASSMGVSKTVTRSQSTSSFTLPSRIGR 5493
G +EE+E I +AR++LL GPA D Q + M+IS++LPR VE LQR+PM+ A R F VVQDFVDTCLRS LLGEG DL P+L LR L SA P A G H+FNRDHG+PLLR GC++ WPDD++ VGPDAIGW I+V D+ G+LA+Y+ P PP DDA WT SA+DAN WH VTV+GR + D++ +G V R+E + E A AV ET +P S SS+FL+EF+ R ASLDLS +IK FGEAGGMA LAQRL+ GR F EVLETFR+ KALRT+ASSRA+KE NWTLKECAA ALLSV PES+RA TK +IAEC+SSV+DLALT SG A AN PLVL+QELEQLEL MAMKVF CPSLERRLAGLMHICGLVTLA++ G T +GES AW TA AME+WLVE GFLEELFG MHVELAKRSEPIL FLAKRNA+STSQLDLLWSST+GKHEAVVRVM VV+NLVPFLSPHKRLHLFSCVA+TPF +YTEQTL LVYLFTVKALEAHRT K PA K G D+ H SA A + G G LRRGQVLHCREREW GYGYGLLWLFVQD+ DQ TG G KG VSA L S+AAGYLVSLLKEPEV+QELWPL+T C++NVVARRSVP+SLEVLRRAIATLPAHEAKSWFGGSRSKE+SVPGALE LQRT LLP LLEEL+ YHA+VA +YG VG AR Q XXX V G GLSEQVQ VLN+GRVRV+GVTTRYSHLQH++A+L FLMFA+TNSSLSL+EAH+DL+WRVLVE ALTPEAADLAL W+RQ CATVGDASTP Q G GLVGPLPALPEA LTYLFE KLA SF G G RP+VA LF LLFVHVNCRTKAIRR+VK + GG G++ A G GW RHG++LDGLDTLWE+VL+A GSQAS S LIVELH RLGPKLKSKAA+IGAGFVDTCL ++ SVSRIR+LR AA P +T + RL A+G+R GSR R RSSSLPP+K RQ R G+ SR++SVEGRD+ RA +LE E +GR SP+A+I+SLHRR GRCILLLA+FV + KE++ +G T VRV V+VGPDRVP L+VRLP S+ LGDLR EVARRFRVP + LEL R VRRKGN E L+QDGASLE +GLV AG P XXXXXXXXXXXXXXXXXXXX S+ SA A PP VE+LAR++GE PS G + S XXXXXXXXXXXXXXX XXXXXXXXXX DLI MDDLL+ W +DE P+RW SLT+ SE PGAV V+ K R R P+S T + +AG A GA GGA + T G +K+LSFR AS G +K S+SSFTLP+R+GR
Sbjct: 11 GEMEEVESMIAEARQSLLQGPAACDLQREKRDMMISERLPRTVERLQRQPMTPQVAARCAKTFTVVQDFVDTCLRSPLLGEGDRARDLRPLLQTLRLLFSAA-APATTAAEGR-------HHFNRDHGKPLLRQCHGCTRRFWPDDEQGTWVGPDAIGWCIDVLDIPGELAQYQFPAPPLDDAAVGWTASAADANMWHRVTVVGRPSGVGDGGDSSSSTGADVVGDEERREGKYREEAMQPGSGGXXXXXAGAVAAETVHQPR---SPSSLFLVEFESGRTASLDLSRLNIK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------FGEAGGMATLAQRLTGGRPSFGEVLETFRVGKALRTYASSRAVKETNWTLKECAAAALLSVPPESMRAATKVEIAECVSSVRDLALTLSGGGSATANSPLVLLQELEQLELAMAMKVFRCPSLERRLAGLMHICGLVTLAERGPGAVTTNGSLPP----AGESRTVAWATARAMEDWLVEVGFLEELFGCSMHVELAKRSEPILAFLAKRNAVSTSQLDLLWSSTVGKHEAVVRVMSPVVLNLVPFLSPHKRLHLFSCVARTPFSKYTEQTLHLVYLFTVKALEAHRTTKSSPASKPGGDSPAGPHASAAASSQTGATPAGDGKGGLLRRGQVLHCREREWEGYGYGLLWLFVQDAPDQGTGN--KRHGGGSGGEKGTVSAALVSLAAGYLVSLLKEPEVSQELWPLMTRCMENVVARRSVPASLEVLRRAIATLPAHEAKSWFGGSRSKENSVPGALETLQRTQGLLPTLLEELKDYHASVASYYGTVVG-------------------------------------ARPS---------------------------------QQGXXXXXXXATAVRWGVGLSEQVQAVLNHGRVRVEGVTTRYSHLQHIQAKLGFLMFALTNSSLSLAEAHVDLLWRVLVEGALTPEAADLALVWLRQVCATVGDASTPAQG----------------------------------------------------------------------GXXXXXXXXXXXXXTAGLVGPLPALPEAALTYLFETKLAVASFHGSGYRPEVAALFGLLFVHVNCRTKAIRRDVKAAAXXXXXXXXXXXXXXXXXXXXXGGVLGSQGAAVVGGG--GWVRHGIDLDGLDTLWEVVLDAAGSQASLAASDLIVELHLRLGPKLKSKAARIGAGFVDTCLHYLQVSVSRIRSLRGRAG---DAAAPXXXXXXXXXXXDTAVAVADSGRLREGASGSRIGSRHFRRRSSSLPPEKGSTRQGRMMGGASSRSTSVEGRDVTRAMQLEAEHHGSVVVGSGRGXXXXXXXXXXXXSPQAQIASLHRRAGRCILLLAKFVTKSKEEENGAASGTTR-VRVSVEVGPDRVPVLDVRLPLSTVLGDLRCEVARRFRVPAEFLELGRVVRRKGNATTEVLDQDGASLEALGLVVAGTGSNLPNHLPTPSPSKTSAPAXXXXXXXXXXXXXXXXXXXXXXSNNASAGATNAPPPGVELLARVIGE-PSFRGDLASGGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLADLICMDDLLDSWADDEIPARWPSLTVSSEHPGAVTVVYKDRPGGRRQQPWSAAAVASLAEGTAMPPTAGAASVGAG----------GGATAAVPLPADGATSAETTGTVATTTTTGPAKKLSFRRSGASGNGAAKL----HSSSSFTLPTRLGR 1612
BLAST of mRNA_D-herbacea_F_contig117.1223.1 vs. uniprot
Match: A0A6H5KTV6_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTV6_9PHAE) HSP 1 Score: 1109 bits (2869), Expect = 0.000e+0 Identity = 814/1593 (51.10%), Postives = 907/1593 (56.94%), Query Frame = 2
Query: 5906 AAETVGEPQHMDQLFDMLELDLGMGG--PFASAGFHVDANGGARRG----RSRSYLEEAGASSVWGSGNLRGGGRLNLDGVGAGGRKGGGEADGXRGGEGAAQKMFGGGSATDVDINASLWHILQALPVDPTMVKDLRSLRKAKKSWDDLLDPNRFYRFVYALQVVDAFCTSRANLSGPKAVESVLAWALRFCSLGGVDHLVSALKVVRETVSVANEAGGSASGSRLEARTLSAALLSRVLHRLFQLDASYFQACAPYDRWSPAALFHASPPQSALV---------------QPSTGYQQKEXXXXXXXGFSLPKLPGTAAAXXXXXXXXXXXX-------SLAASKLESVGEGVLSDAVHVLLSLLRQ---SAPVKPLASAVAHVLTLVSGLAGG-MSGGALALERHPALGSLLRALCLRVPDQAVRRAACAVLYRASHWQAIIVRDTGGAPAAGGDITTPAPTVGDGEVSATPSSTPEHLSRRRNGMPTTTSGSLARVLFDCLRSDIERVQMIPSARNSSNSSAGVXXXXXXXXXXXXXXXXXXXXXXGITDGNGTNGGVDGRNGLPPVFVPRLHLVEVTAFVAGLVHVMLHKSATATGPKQPVPIDRASNGTGTSIXXXXXXXXXXXXXXXSDERGAAASRGSDAVPASPPAXXXXXXDVGVGVD--GDVCS-SAAGGGVA----TAD------------EHAEAAADWLLREAARRLIAHEFTETFKSDAPDLLLASLLHALTVAVTGSIPRKRLAESLFARLAP--------------------------PSPSSPSGLIRFLYEGCLFPPARAESPPADKRANVAGALAVSGSVGXXXXXXXXXXXXXXXXXXXXXVAESSLGPRCKKRGSRRAAFALLAALCRGEEEHLRQTLGLLGGRDLVTRRFLDSDD-----GEEKGXXXXXXXXXXXXXXXXXXXXVGGVSG-----------------------VVVVGMDQPGSVG--SGEPWDYDPTSVLKESGQHVGLQNQAWKGAGGGRGEKEGWRQGATCYMNSLLQQLYHVPEFSLQLLGLAPDRRIEGNEENHPLQEEDEVLLQLQVLFASLRISQRKYYDTKPFCAVFKDYDGQPLRHAEQKDVNEFCTHLMHKLERSSKDAGALIDRVFGGTLVYQIISRDCEHTSERTEPFLVLTAEVQQDKESLEGSLQLLVAGEMLTGDNCYQCEKCGQHVTAQRRCAIKQLPPTLIVHLKRFEFDLTTMSRHKLNHRCSFPMELDMSPWTLESIQRHDT--RLSGVSEGAETAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGK---------------------------------EADGGEG--SPLRA--RQLWLSSKPGDDDQEGTTITTA--MPENSKIPSGGVGGGEGGAASELVEAAEAPSYGNDQGSRVNGDVAAAAAVAGVSAEASKRSTMGRRDRERNKTGYRLKGIVAHQGTADRGHCYSLIRVDGDKWLEFNDRRVTPYDPANIPRDCFGGAATPEPGSA-DASGHGHL-----HETNAYLL 10222
AAETVGEPQHM+QLFDMLELDLGM G A G +RRG + ++ E G WGSG+LR G + + G G RGG GGG VD NASLWHILQALP+DPT+++DLRSL KA+ SWD LLDP+R YRFVYALQVVDAFCTSR NLSGPK+VESVLAW LRFC LGGV+HLV+AL+VVR V NEAGG+A SRLEA TLSAALLSRVLHRLFQL+ASYF++C P +RWSPA LFHASPP + + ++GYQ+K G LP+L T+AA ++ A LESVG VLSD VH+L+SLLRQ PVKPL SAVAHVLTLV L+GG ++GGA ALERHPALGSLLRALC+R+PD +VRR+AC+VL+RAS WQA+ + + A G S+T + +R N LARVL LR+D+ RVQ +P AR SAG G+G G P+ VPRLHLVEVTAFVAGLVHVML ++ ++ P VP + G A P + G D G V S +AA GGV+ TA E A AA+WLL EAARRL AHEFTETF+SDAPD +L +LLHALTVAV GS RKRLAE+LF+RL+ P P GLIRFLYE CLFPPA E XXXXXXXXXXXXXXXXXXXXXVAESSLGPRCKKR SRRAAFALL+ALCRG E HLRQ LLGGRDLVT+ FLDSD G E G V V+G D G G SGEPWDYDPTSVLKESGQHVGLQNQ GATCYMNSLLQQLYHV +FSLQLLGL PDRR G E + PLQEEDEVLLQLQVLFA+LRISQRK+YDTKPFCAVF DYDGQPLRHAEQKDVNEFCTHL+HKLE SSK AG+LI +VFGGTL YQ+ISRDCEHTSERTEPF+VLTAEVQ DKESLEGSLQLLVAGEMLTGDNCY CEKCGQ VTAQRRCAIKQLP TLIVHLKRFEFDL TM RHKLNHRCSFPMELDM+PWTLE+IQR + RLSG SEG TA AXXXXXXXXXXXXXXXX XXXXXXXXXXX + DG EG SP R + LW P S +P G EG AS +GS R + +T YRLKGIVAHQGTAD GH YSLIR GD+WLEFNDRRVTPYDPANIPRDCFGGA TP+ G A DAS HET+AYLL
Sbjct: 736 AAETVGEPQHMNQLFDMLELDLGMDGGXXXXXXXXXXSAGGDSRRGLPPNTAVAWHEPGGEGRAWGSGSLRDGVQCAAERRTGAGSMAGQSRGAWRGGX-XXXGGGGGGVEPTVDYNASLWHILQALPMDPTVLRDLRSLHKAESSWDALLDPSRCYRFVYALQVVDAFCTSRTNLSGPKSVESVLAWVLRFCRLGGVEHLVTALEVVRGKVQAVNEAGGAAEASRLEAWTLSAALLSRVLHRLFQLNASYFESCPPGERWSPATLFHASPPHLFMAAAXXXXXXXXXVPPGKEASGYQEK-------GGIPLPRLLDTSAAAASSAKEPSPVAQEPDPLVTVTAVNLESVGGSVLSDVVHLLISLLRQVHRGTPVKPLVSAVAHVLTLVGSLSGGGLAGGARALERHPALGSLLRALCIRIPDSSVRRSACSVLHRASAWQALGRDPSCCSEARNGXXXXX-------XXSSTAKLGKDGAEKRNN--------ELARVLLTSLRTDLARVQAVPFAR-----SAGPGAPVRVGLSPVRRARGDATAAETAAIGSGVGGSA-------PIVVPRLHLVEVTAFVAGLVHVMLENASLSSFPPPAVPPRQPRPAAGLP-QQQELSTNRQAPRHPQQXXXXXXXXXXXXXXARPSVLPADRDETGTSKDAAGLVASVAAAAGGVSRGADTASVNVNGERDEGERELASTAAEWLLEEAARRLAAHEFTETFESDAPDHVLITLLHALTVAVAGSPRRKRLAETLFSRLSSSXXXXXXXXXXXXXXXXXSATGVARVPRP----GLIRFLYERCLFPPASREPXXXXXX--------------XXXXXXXXXXXXXXXXXXXXXVAESSLGPRCKKRESRRAAFALLSALCRGNEAHLRQAFVLLGGRDLVTKGFLDSDMDSGNLGSEDGSASDSSVIAVADGSRGASHGVATVAGDGAEEATAAXXXXXXXXXXXPSTPAATLEDASGGAGVRSGEPWDYDPTSVLKESGQHVGLQNQ-----------------GATCYMNSLLQQLYHVQDFSLQLLGLVPDRRAGGGESSDPLQEEDEVLLQLQVLFATLRISQRKFYDTKPFCAVFMDYDGQPLRHAEQKDVNEFCTHLLHKLEGSSKQAGSLIAKVFGGTLAYQVISRDCEHTSERTEPFIVLTAEVQ-DKESLEGSLQLLVAGEMLTGDNCYLCEKCGQRVTAQRRCAIKQLPSTLIVHLKRFEFDLGTMRRHKLNHRCSFPMELDMAPWTLENIQRQHSGGRLSGGSEGRGTAEAXXXXXXXXXXXXXXXXSAPTAAEGNAGPGFFSGDSGTRQDSIAAVDSMAAVGATSQSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDGSEGPRSPPRVDRKPLWHPEXXXXXXXXXXXXXXXDERPSCSSLPHA-AGAREGNEASGGXXXXXXXXXXXGRGSSTR-----------------------RAETVSGRTEYRLKGIVAHQGTADHGHYYSLIRASGDRWLEFNDRRVTPYDPANIPRDCFGGALTPQEGGALDASAXXXXXXXXXHETSAYLL 2232
BLAST of mRNA_D-herbacea_F_contig117.1223.1 vs. uniprot
Match: A0A6H5L1L9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1L9_9PHAE) HSP 1 Score: 648 bits (1671), Expect = 1.380e-202 Identity = 425/812 (52.34%), Postives = 486/812 (59.85%), Query Frame = 1
Query: 388 PLLRVFRGCSKTIWPDDQESARVGPDAIGWRIEVFDVHGQLARYRRPEPPSDD--AKWTPSASDANKWHLVTVIGRCPPLSADPDANKQSGPGQV-----RQEKQVEESAAVGR-------------ETETEPLRVDSSSSVFLIEFDGDRKASLDLSHFSIKWVSFSEMNEDNQHGGLLAQNNGGGEGSVGRTSANVA--DGSVRLANDDTDVGTRVDVWWPRYNSYFRATIKRYDASQGTHTLHYEDGEVRDSDMSKRGFRVCRAPK-----------QQXXXXXXXXXXXXXXXXASGLDATSLAGQHAQSSPSRKRHVSLAPRPPAEYAPDTSAYVIAALNRFGEAGGMAPLAQRLSSGRAPFNEVLETFRLAKALRTHASSRAMKEVNWTLKECAAGALLSVAPESLRATTKADIAECLSSVKDLALTGSGA-KAAANPPLVLVQELEQL---------------ELGMAMKVFCCPSLERRLAGLMHICGLVTLAKQREGPATNYAPXXXXXXXSGESGRSAWVTAEAMEEWLVEGGFLEELFGSRMHVELAKRSEPILTFLAKRNAISTSQLDLLWSSTLGKHEAVVRVMCNVVVNLVPFLSPHKRLHLFSCVAQTPFYRYTEQTLDLVYLFTVKALEAHRTMKLPAGKVGDDTGGSAHPSAPAGDDSAXXXVAAGGKGGLRRGQVLHCREREWMGYGYGLLWLFVQDSRDQVTGGGAXXXXXXXAGVKGGVSAKLTSMAAGYLVSLLKEPEVAQELWPLITGCVDNVVARRSVPSSLEVLRRAIATLPAHEAKSWFGGSRSKEH 2676
PLL+ + + P + RVGPDAIGW I+V DV G+LA+Y+ PP DD +WT +DAN WH VTV+GR + D++ +G V R+ K EE+ G ET +P S SS+FL+EF+ R A+LDLS IKWV F + G R D L+ DD DVGTRVDVWWPRYNSYFRATI+RYD + GTHTL YEDGE+RDSDMSKRGFRVC P XXXXXXXXXXXXXXXX ++ R+R LAPRPPA+YAPD S YV+AA+NRFGEAGGMA LAQRLS GR F EVLETFR+ KALR HASSRA+KE NWTLKECAA ALLSV PES+RA TK +IAE +SSV+DLALT SG A A+ PLVL+QELE E+G A +VF CPSLERRLAGLMHICGLVTLA++ G T +GES +AW T ME+WLVE GFLEELFGS MHVELA VVRVM VV+NLVPFLSPHKRLHLFSCVA+TPF +YTEQTL LV GGS + + R VLHCREREW GYGYGLLWLFVQD+ DQ TG G KG VSA L S+AAGYLVSLLKEPEV+QELWPL+T C++NVVARRSVP+SLEVLRRAIATLPAHEAKSWFGGSRSKE+
Sbjct: 16 PLLKRY-----FLHPSPPPAGRVGPDAIGWCIDVLDVPGELAQYQFSAPPLDDPAVEWTALTADANMWHRVTVVGRPSGVGDGGDSSSSTGADVVGDEERREGKYREEATRPGSSXXXXXXXXXXXXETSQQPR---SPSSLFLVEFESGRTATLDLSRLDIKWVQFCGADSSGVRQGSRGAQEQXXXXXXSRAPPGFGEWDDGDGLSYDDNDVGTRVDVWWPRYNSYFRATIERYDPNVGTHTLFYEDGEIRDSDMSKRGFRVCYRPPGWTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAWGRRRPSPLAPRPPADYAPDASMYVLAAVNRFGEAGGMATLAQRLSGGRPSFGEVLETFRIGKALRAHASSRAVKETNWTLKECAAAALLSVPPESMRAATKIEIAESVSSVRDLALTLSGGGSATAHAPLVLLQELEXXXXXXXXXXXXXXXGGEVG-ANEVFRCPSLERRLAGLMHICGLVTLAERGPGAVTTNGSLPP----AGESRTAAWATPRVMEDWLVEVGFLEELFGSSMHVELA----------------------------------VVRVMSPVVLNLVPFLSPHKRLHLFSCVARTPFSKYTEQTLHLV-------------------------GGSVYTA---------------------RKAVLHCREREWEGYGYGLLWLFVQDAPDQGTGN--KRHGGGSGGEKGAVSAALVSLAAGYLVSLLKEPEVSQELWPLMTRCMENVVARRSVPASLEVLRRAIATLPAHEAKSWFGGSRSKEN 732
BLAST of mRNA_D-herbacea_F_contig117.1223.1 vs. uniprot
Match: A0A835YQG3_9STRA (USP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQG3_9STRA) HSP 1 Score: 263 bits (672), Expect = 2.230e-76 Identity = 135/221 (61.09%), Postives = 164/221 (74.21%), Query Frame = 2
Query: 8702 MNSLLQQLYHVPEFSLQLLGLAPDRRIEGNEENHPLQEEDEVLLQLQVLFASLRISQRKYYDTKPFCAVFKDYDGQPLRHAEQKDVNEFCTHLMHKLERSSKDAGALIDRVFGGTLVYQIISRD--CEHTSERTEPFLVLTAEVQQDKESLEGSLQLLVAGEMLTGDNCYQCEKCGQHVTAQRRCAIKQLPPTLIVHLKRFEFDLTTMSRHKLNHRCSFPM 9358
+NS+LQQLYH FS L+G AP RR P +E+DE+L +LQVLFASL + QR+Y+DT+P C+ F DYDG+P+ AEQKD EFC+ L+ KLERSS A L+ FGGTL YQI+ R+ C HTS R EPFL+LTAEVQ K++L +L L +GE L GDN Y CE+CG+ V AQRRCAIK LPPTLIVHLKRFEF+L TM+RHKLNHRC+FPM
Sbjct: 1 LNSVLQQLYHTRAFSGPLMGAAPARR--------PGREQDELLFKLQVLFASLHVGQRRYHDTRPLCSSFLDYDGRPMSLAEQKDAYEFCSMLLDKLERSSDAARELVKATFGGTLQYQIVPREPGCAHTSTRDEPFLMLTAEVQT-KDTLAAALDLFTSGETLDGDNKYLCEQCGRRVAAQRRCAIKDLPPTLIVHLKRFEFNLETMTRHKLNHRCAFPM 212
BLAST of mRNA_D-herbacea_F_contig117.1223.1 vs. uniprot
Match: A0A7S3MAA4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAA4_9STRA) HSP 1 Score: 231 bits (590), Expect = 7.400e-64 Identity = 129/296 (43.58%), Postives = 179/296 (60.47%), Query Frame = 2
Query: 8573 WDYDPTSVLKESGQHVGLQNQAWKGAGGGRGEKEGWRQGATCYMNSLLQQLYHVPEFSLQLLGL-APDRRIEGNEENHPLQEED----EVLLQLQVLFASLRISQRKYYDTKPFCAVFKDYDGQPLRHAEQKDVNEFCTHLMHKLERSSKDAGALIDRVFGGTLVYQIISRDCEHTSERTEPFLVLTAEVQQDKESLEGSLQLLVAGEMLTGDNCYQCEKCGQHVTAQRRCAIKQLPPTLIVHLKRFEFDLTTMSRHKLNHRCSFPMELDMSPWTLESIQRHDTRLSGVSEGAETA 9445
W+YDP ++LKE +VGL NQ G TCYMNS +QQL+H+P F LL + A + + N+ L+E+ E+L QLQV+F + SQ++YYDT PFC F DYD +P+ EQKD+NEF L K+E + K+A AL+ G +V++ S + + SER E F +LTAEV+ DK +LE SL+L A E+ +GDN + + G+ V A R CAI+ LPPTLI+HLKRFEFDL TM+R K+N SFP L+M P+T E +Q + +L + T+
Sbjct: 5 WNYDPDTLLKEPDAYVGLCNQ-----------------GGTCYMNSFIQQLFHIPAFKTGLLRINAAAKTAKDATSNNSLEEKPDPNVELLFQLQVMFGFMNFSQKRYYDTLPFCRTFLDYDAEPISLTEQKDINEFAGMLFDKIEHN-KEAAALLASTIQGKIVWRTRSLETPYKSEREETFYMLTAEVK-DKATLEDSLELFTADELFSGDNKIEDAEAGRKVDALRGCAIRSLPPTLIIHLKRFEFDLETMNRKKVNDHISFPTNLNMFPYTEEGLQAKEDKLRASDPSSATS 281
BLAST of mRNA_D-herbacea_F_contig117.1223.1 vs. uniprot
Match: A0A7S4ITW2_9EUKA (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4ITW2_9EUKA) HSP 1 Score: 213 bits (541), Expect = 3.140e-56 Identity = 121/282 (42.91%), Postives = 163/282 (57.80%), Query Frame = 2
Query: 8567 EPWDYDPTSVLKESGQHVGLQNQAWKGAGGGRGEKEGWRQGATCYMNSLLQQLYHVPEFSLQLLGLAPDRRIEGNEENHPLQEEDEVLLQLQVLFASLRISQRKYYDTKPFCAVFKDYDGQPLRHAEQKDVNEFCTHLMHKLERSSKDA--GALIDRVFGGTLVYQIISRDCEHTSERTEPFLVLTAEVQQDKESLEGSLQLLVAGEMLTGDNCYQCEKCGQHVTAQRRCAIKQLPPTLIVHLKRFEFDLTTMSRHKLNHRCSFPMELDMSPWTLESIQRHD 9406
+ W+Y P++++K +VGLQN GATCYMNSLLQQLY +P F +L L D +E H + Q + LF L+ S ++YY+TK FC + D + Q D +EF L +LE +KD L+ +FGGT+ Q+IS++CEH SER EPF L+ V+ K SLE SL+L V G+ML GDN YQC KC + VTA +RC I+ LP TLIVH+KRFEFDL M R K+N C FP +L++ P+T E + R +
Sbjct: 53 QSWNYYPSTLVKSPCGYVGLQNL-----------------GATCYMNSLLQQLYMIPNFRCGILSLPHD-----DESTH-----GSFVFQFKRLFGFLQESAKRYYETKQFCESYSDNFNPTI----QMDADEFFAMLFDRLETVTKDTPQATLLRDIFGGTVCNQVISKECEHVSERQEPFYSLSVTVK-GKSSLEESLELYVEGDMLEGDNKYQCSKCDKKVTALKRCCIESLPNTLIVHMKRFEFDLEEMRRMKVNDHCKFPFDLNVEPYTKEGLARRE 302
BLAST of mRNA_D-herbacea_F_contig117.1223.1 vs. uniprot
Match: A0A0D2WMI0_CAPO3 (Ubiquitinyl hydrolase 1 n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WMI0_CAPO3) HSP 1 Score: 228 bits (581), Expect = 1.480e-55 Identity = 129/295 (43.73%), Postives = 170/295 (57.63%), Query Frame = 2
Query: 8573 WDYDPTSVLKESGQHVGLQNQAWKGAGGGRGEKEGWRQGATCYMNSLLQQLYHVPEFSLQLLGLAPDRRIEGNEENHPLQEEDEVLLQLQVLFASLRISQRKYYDTKPFCAVFKDYDGQPLRHAEQKDVNEFCTHLMHKLERSSKDAG--ALIDRVFGGTLVYQIISRDCEHTSERTEPFLVLTAEVQQDKESLEGSLQLLVAGEMLTGDNCYQCEKCGQHVTAQRRCAIKQLPPTLIVHLKRFEFDLTTMSRHKLNHRCSFPMELDMSPWTLESIQRHDTRLSGVSEGAETAVA 9451
W+Y PT+ K +VGL+N GATCYMNS++QQ + +P F +L I+ + E P D +L QLQ +F++L+ S+++ +DT+PF FKDYDGQP+ A Q DV+EF T L +LE K + + + FGG L+ QIIS+DCEH S R E L EV+ K LE SL L V GEML GDN Y C C +HVTA++R + LP TLIVHLKRFEFD+ T+ R+K+N C FP ELDM P+TL + R + S E T A
Sbjct: 1807 WNYAPTASHKAPCGYVGLRNL-----------------GATCYMNSIMQQFFMIPSFRRNVLA------IDASAETDPA---DSMLYQLQCIFSNLQESEKRTFDTRPFTLTFKDYDGQPMNVAMQMDVDEFFTTLFDRLETRLKGSPHETIFKQTFGGQLIQQIISQDCEHVSSRVEDCFALQCEVKNKKSILE-SLALYVEGEMLDGDNKYFCATCSRHVTAKKRACVFSLPQTLIVHLKRFEFDMETLRRYKINDYCEFPHELDMEPYTLAGLTRLERESSTTMEEGTTGTA 2074
BLAST of mRNA_D-herbacea_F_contig117.1223.1 vs. uniprot
Match: A0A482SHC7_9ARCH (USP domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SHC7_9ARCH) HSP 1 Score: 224 bits (572), Expect = 1.330e-54 Identity = 126/288 (43.75%), Postives = 174/288 (60.42%), Query Frame = 2
Query: 8573 WDYDPTSVLKESGQHVGLQNQAWKGAGGGRGEKEGWRQGATCYMNSLLQQLYHVPEFSLQLLGLAPDRRIEGNEENHPLQEEDEVLLQLQVLFASLRISQRKYYDTKPFCAVFKDYDGQPLRHAEQKDVNEFCTHLMHKLERSSKDAGALIDRVFGGTLVYQIISRDCEHTSERTEPFLVLTAEVQQDKESLEGSLQLLVAGEMLTGDNCYQCEKCGQHVTAQRRCAIKQLPPTLIVHLKRFEFDLTTMSRHKLNHRCSFPMELDMSPWTLESIQRHDTRLSGVSEGA 9436
WDYDP +L+ SG ++GL NQ G TCYMN+ +QQLYH F+ QLL ++ E E +H +LLQ+Q++FA L+ SQ++ YDT PFC DYDGQP+ +EQKD+NEF L KLE++S A L+ + GT ++Q S + + SER E F ++T EV+ K LE +L+L VA E+ TG+N + + + V A RRCAI+ LPP LI+HLKRFEFDL TM+R K+N SFP ELDM P+T E++ H + V + +
Sbjct: 1797 WDYDPNLILRSSGDYIGLCNQ-----------------GGTCYMNAFIQQLYHAQTFTDQLLSVST--YAEEAEYSH-------LLLQMQMMFAYLKYSQKRVYDTLPFCKALIDYDGQPISLSEQKDINEFAGMLFDKLEKNSA-AAELLAQTIQGTYIWQTKSLETTYYSEREEKFYMITVEVKNKKTLLE-ALELTVAEELFTGENKIEDSENNKKVDAVRRCAIRDLPPVLIIHLKRFEFDLETMNRKKVNDYMSFPFELDMFPYTEEALASHTPQKPAVPDAS 2056
BLAST of mRNA_D-herbacea_F_contig117.1223.1 vs. uniprot
Match: L8GPA8_ACACA (Ubiquitinyl hydrolase 1 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GPA8_ACACA) HSP 1 Score: 222 bits (566), Expect = 7.400e-54 Identity = 121/280 (43.21%), Postives = 167/280 (59.64%), Query Frame = 2
Query: 8573 WDYDPTSVLKESGQHVGLQNQAWKGAGGGRGEKEGWRQGATCYMNSLLQQLYHVPEFSLQLLGLAPDRRIEGNEENHPLQEEDEVLLQLQVLFASLRISQRKYYDTKPFCAVFKDYDGQPLRHAEQKDVNEFCTHLMHKLERSSKDAGA--LIDRVFGGTLVYQIISRDCEHTSERTEPFLVLTAEVQQDKESLEGSLQLLVAGEMLTGDNCYQCEKCGQHVTAQRRCAIKQLPPTLIVHLKRFEFDLTTMSRHKLNHRCSFPMELDMSPWTLESIQRHD 9406
W Y P++ K + +VGL+N GATCYMNSL+QQ + +P F +L ++ +EE +E+ +L QLQ +F L+ S++KYYDT+PFC+ +KD++GQP+ +Q+D +EF L+ +LE K L+ + FGG L QIIS+DC H SER E F L+ +++ K LE SL L V G+ML GDN + C +C V A +RC +K LP LIVHLKRFEFDL TM R KLN C FPM LDM P+T E + + +
Sbjct: 1381 WKYQPSAYEKAACGYVGLKNL-----------------GATCYMNSLMQQFFMIPGFRWGML------EVQDSEEK----KEESLLWQLQTIFGYLQESEKKYYDTRPFCSSYKDWEGQPMNVGQQQDADEFMNMLLDRLESILKKTQEEKLLSQFFGGALSNQIISKDCTHVSEREENFFTLSLDIKNKKSILE-SLALYVEGDMLEGDNKFHCSECNAKVDALKRCCVKNLPDNLIVHLKRFEFDLETMKRIKLNDSCQFPMILDMEPYTKEGLAKKE 1632
BLAST of mRNA_D-herbacea_F_contig117.1223.1 vs. uniprot
Match: L8GRS0_ACACA (Ubiquitinyl hydrolase 1 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GRS0_ACACA) HSP 1 Score: 214 bits (544), Expect = 2.600e-51 Identity = 120/266 (45.11%), Postives = 162/266 (60.90%), Query Frame = 2
Query: 8615 HVGLQNQAWKGAGGGRGEKEGWRQGATCYMNSLLQQLYHVPEFSLQLLGLAPDRRIEGNEENHPLQEEDEVLLQLQVLFASLRISQRKYYDTKPFCAVFKDYDGQPLRHAEQKDVNEFCTHLMHKLERSSK--DAGALIDRVFGGTLVYQIISRDCEHTSERTEPFLVLTAEVQQDKESLEGSLQLLVAGEMLTGDNCYQCEKCGQHVTAQRRCAIKQLPPTLIVHLKRFEFDLTTMSRHKLNHRCSFPMELDMSPWTLESIQRHD 9406
+VGLQNQ GATCYMNSL+QQL+ +P F +L LA D + + D +L Q+QVLF++L S ++YYDT FCA +KDYDG+P+ +Q D NEF +L KLE K + L+ VFGG L Q+I ++C H SER EPF L+ E++ +K+ +E SL+L +AGEML G+N Y+CE C + +RC I +LP +++HLKRFEFDL M KLN RC FPM L+M P+T E I R +
Sbjct: 1562 YVGLQNQ-----------------GATCYMNSLMQQLFLIPRFRQGIL-LADDNSADKS---------DSLLYQMQVLFSNLMKSVKRYYDTIEFCAAYKDYDGKPVNTGQQMDANEFFNNLFAKLEDHLKGSEEEKLLSDVFGGELSNQLIPKECTHRSERLEPFYSLSIEIK-NKKDIEESLKLFIAGEMLQGENKYKCEICQKGRDTLKRCCIAKLPRIMMLHLKRFEFDLEKMRNVKLNDRCEFPMSLNMEPYTKEYIGRQE 1799 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig117.1223.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig117.1223.1 >prot_D-herbacea_F_contig117.1223.1 ID=prot_D-herbacea_F_contig117.1223.1|Name=mRNA_D-herbacea_F_contig117.1223.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=1519bp MGLRAVVGGAVAPGAAVVVVVVAVVVAGGGALTSLPSLSSLLASAQTRREback to top mRNA from alignment at D-herbacea_F_contig117:258550..294987+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig117.1223.1 ID=mRNA_D-herbacea_F_contig117.1223.1|Name=mRNA_D-herbacea_F_contig117.1223.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=36438bp|location=Sequence derived from alignment at D-herbacea_F_contig117:258550..294987+ (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig117:258550..294987+ >mRNA_D-herbacea_F_contig117.1223.1 ID=mRNA_D-herbacea_F_contig117.1223.1|Name=mRNA_D-herbacea_F_contig117.1223.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=9114bp|location=Sequence derived from alignment at D-herbacea_F_contig117:258550..294987+ (Desmarestia herbacea DmunF female)back to top |