mRNA_D-herbacea_F_contig117.1222.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig117.1222.1 vs. uniprot
Match: D8LU88_ECTSI (Ubiquitin domain-containing protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU88_ECTSI) HSP 1 Score: 1276 bits (3301), Expect = 0.000e+0 Identity = 936/1950 (48.00%), Postives = 1071/1950 (54.92%), Query Frame = 1
Query: 1 GMIEELEGRITKARKALLAGPACLDEQSQNVKMLISDQLPRAVEELQRRPMSTVAARRTVAFFAVVQDFVDTCLRSNLLGEGLLRLDLGPVLYVLRCLLSAEPVPPRYALHGAQACMPPPHYFNRDHGRPLLRVFRGCSKTIWPDDQESARVGPDAIGWRIEVFDVHGQLARYRRPEPPSDDAK--WTPSASDANKWHLVTVIGRCPPLSADPDANKQSGPGQV----RQEKQVEESA--------------AVGRETETEPLRVDSSSSVFLIEFDGDRKASLDLSHFSIKWVSFSEMNEDNQHGGLLAQNNGGGEGSVGRTSANVADGSVRLANDDTDVGTRVDVWWPRYNSYFRATIKRYDASQGTHTLHYEDGEVRDSDMSKRGFRVCRAPKQQXXXXXXXXXXXXXXXXASGLDATSLAGQHAQSSPSRKRHVSLAPRPPAEYAPDTSAYVIAALNRFGEAGGMAPLAQRLSSGRAPFNEVLETFRLAKALRTHASSRAMKEVNWTLKECAAGALLSVAPESLRATTKADIAECLSSVKDLALTGSGA-KAAANPPLVLVQELEQLELGMAMKVFCCPSLERRLAGLMHICGLVTLAKQREGPATNYAPXXXXXXXSGESGRSAWVTAEAMEEWLVEGGFLEELFGSRMHVELAKRSEPILTFLAKRNAISTSQLDLLWSSTLGKHEAVVRVMCNVVVNLVPFLSPHKRLHLFSCVAQTPFYRYTEQTLDLVYLFTVKALEAHRTMKL-PAGKVGDDTGGSAHPSAPAGDDSAXXXVAAGGKGGLRRGQVLHCREREWMGYGYGLLWLFVQDSRDQVTGGGAXXXXXXXAGVKGGVSAKLTSMAAGYLVSLLKEPEVAQELWPLITGCVDNVVARRSVPSSLEVLRRAIATLPAHEAKSWFGGSRSKEHSVPGALEALQRTHKLLPALLEELEGYHAAVALHYGRTVGLFLGNGTVTGSXXXXXXXXXXXXXXXXXXXXDPRRDHARSGGGSGXXXXXXXXXXXXXSPPGASMSAATDVLAVDQSRGRGXXXXXXVVRGAGLSEQVQTVLNYGRVRVDGVTTRYSHLQHVKARLDFLMFAVTNSSLSLSEAHIDLVWRVLVEEALTPEAADLALTWMRQACATVGDASTPLQAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAGRCARGTXXXXXXXXXXXXI*GFFYTFLLDYGAPLDPGLVGPLPALPEAVLTYLFENKLAAVSFDGYGVRPQVAVLFRLLFVHVNCRTKAIRREVKVGSGGGGASA--------------GGSAGAESALAHGTALEGWTRHGMELDGLDTLWEIVLNATGSQASRTVSALIVELHWRLGPKLKSKAAKIGAGFVDTCLGRMRASVSRIRALRAALAAESGAAGPGRDDGGDGDGAETDTSAGAEARLAAAANGARSGSR--RTRSSSLPPQK--ERQSRR--GSRSRASSVEGRDLGRAEELERERAAR---DAGR-----------LPSPRAEISSLHRRIGRCILLLARFVDRGKEDDTKTNTGVTATVRVLVQVGPDRVPALEVRLPASSTLGDLRREVARRFRVPWDALELVREVRRKGNTVAEKLEQDGASLEDIGLVAAGA----------IHPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLSSATSANGVPASPPVVEILARMVGEGPSRGGGVGSAAXXXXXXXXXXXXXXXXXVGRGAAAXXXXXXXXXX------------------------------------------------DLIDMDDLLEGWEEDEDPSRWASLTMPSEFPGAVNVLCKGRYRWGRPPPYSQQTAGE----TGLLLSAGCAMSGAAVQMADAACSSGGALGSGSXXXXXXXXXXXXXXXQETAEIG-SKRLSFRLPSASSMGVSKTVTRSQSTSSFTLPSRIGR 5493
G +EE+E I +AR++LL GPA D Q + M+IS++LPR VE LQR+PM+ A R F VVQDFVDTCLRS LLGEG DL P+L LR L SA P A G H+FNRDHG+PLLR GC++ WPDD++ VGPDAIGW I+V D+ G+LA+Y+ P PP DDA WT SA+DAN WH VTV+GR + D++ +G V R+E + E A AV ET +P S SS+FL+EF+ R ASLDLS +IK FGEAGGMA LAQRL+ GR F EVLETFR+ KALRT+ASSRA+KE NWTLKECAA ALLSV PES+RA TK +IAEC+SSV+DLALT SG A AN PLVL+QELEQLEL MAMKVF CPSLERRLAGLMHICGLVTLA++ G T +GES AW TA AME+WLVE GFLEELFG MHVELAKRSEPIL FLAKRNA+STSQLDLLWSST+GKHEAVVRVM VV+NLVPFLSPHKRLHLFSCVA+TPF +YTEQTL LVYLFTVKALEAHRT K PA K G D+ H SA A + G G LRRGQVLHCREREW GYGYGLLWLFVQD+ DQ TG G KG VSA L S+AAGYLVSLLKEPEV+QELWPL+T C++NVVARRSVP+SLEVLRRAIATLPAHEAKSWFGGSRSKE+SVPGALE LQRT LLP LLEEL+ YHA+VA +YG VG AR Q XXX V G GLSEQVQ VLN+GRVRV+GVTTRYSHLQH++A+L FLMFA+TNSSLSL+EAH+DL+WRVLVE ALTPEAADLAL W+RQ CATVGDASTP Q G GLVGPLPALPEA LTYLFE KLA SF G G RP+VA LF LLFVHVNCRTKAIRR+VK + GG G++ A G GW RHG++LDGLDTLWE+VL+A GSQAS S LIVELH RLGPKLKSKAA+IGAGFVDTCL ++ SVSRIR+LR AA P +T + RL A+G+R GSR R RSSSLPP+K RQ R G+ SR++SVEGRD+ RA +LE E +GR SP+A+I+SLHRR GRCILLLA+FV + KE++ +G T VRV V+VGPDRVP L+VRLP S+ LGDLR EVARRFRVP + LEL R VRRKGN E L+QDGASLE +GLV AG P XXXXXXXXXXXXXXXXXXXX S+ SA A PP VE+LAR++GE PS G + S XXXXXXXXXXXXXXX XXXXXXXXXX DLI MDDLL+ W +DE P+RW SLT+ SE PGAV V+ K R R P+S T + +AG A GA GGA + T G +K+LSFR AS G +K S+SSFTLP+R+GR
Sbjct: 11 GEMEEVESMIAEARQSLLQGPAACDLQREKRDMMISERLPRTVERLQRQPMTPQVAARCAKTFTVVQDFVDTCLRSPLLGEGDRARDLRPLLQTLRLLFSAA-APATTAAEGR-------HHFNRDHGKPLLRQCHGCTRRFWPDDEQGTWVGPDAIGWCIDVLDIPGELAQYQFPAPPLDDAAVGWTASAADANMWHRVTVVGRPSGVGDGGDSSSSTGADVVGDEERREGKYREEAMQPGSGGXXXXXAGAVAAETVHQPR---SPSSLFLVEFESGRTASLDLSRLNIK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------FGEAGGMATLAQRLTGGRPSFGEVLETFRVGKALRTYASSRAVKETNWTLKECAAAALLSVPPESMRAATKVEIAECVSSVRDLALTLSGGGSATANSPLVLLQELEQLELAMAMKVFRCPSLERRLAGLMHICGLVTLAERGPGAVTTNGSLPP----AGESRTVAWATARAMEDWLVEVGFLEELFGCSMHVELAKRSEPILAFLAKRNAVSTSQLDLLWSSTVGKHEAVVRVMSPVVLNLVPFLSPHKRLHLFSCVARTPFSKYTEQTLHLVYLFTVKALEAHRTTKSSPASKPGGDSPAGPHASAAASSQTGATPAGDGKGGLLRRGQVLHCREREWEGYGYGLLWLFVQDAPDQGTGN--KRHGGGSGGEKGTVSAALVSLAAGYLVSLLKEPEVSQELWPLMTRCMENVVARRSVPASLEVLRRAIATLPAHEAKSWFGGSRSKENSVPGALETLQRTQGLLPTLLEELKDYHASVASYYGTVVG-------------------------------------ARPS---------------------------------QQGXXXXXXXATAVRWGVGLSEQVQAVLNHGRVRVEGVTTRYSHLQHIQAKLGFLMFALTNSSLSLAEAHVDLLWRVLVEGALTPEAADLALVWLRQVCATVGDASTPAQG----------------------------------------------------------------------GXXXXXXXXXXXXXTAGLVGPLPALPEAALTYLFETKLAVASFHGSGYRPEVAALFGLLFVHVNCRTKAIRRDVKAAAXXXXXXXXXXXXXXXXXXXXXGGVLGSQGAAVVGGG--GWVRHGIDLDGLDTLWEVVLDAAGSQASLAASDLIVELHLRLGPKLKSKAARIGAGFVDTCLHYLQVSVSRIRSLRGRAG---DAAAPXXXXXXXXXXXDTAVAVADSGRLREGASGSRIGSRHFRRRSSSLPPEKGSTRQGRMMGGASSRSTSVEGRDVTRAMQLEAEHHGSVVVGSGRGXXXXXXXXXXXXSPQAQIASLHRRAGRCILLLAKFVTKSKEEENGAASGTTR-VRVSVEVGPDRVPVLDVRLPLSTVLGDLRCEVARRFRVPAEFLELGRVVRRKGNATTEVLDQDGASLEALGLVVAGTGSNLPNHLPTPSPSKTSAPAXXXXXXXXXXXXXXXXXXXXXXSNNASAGATNAPPPGVELLARVIGE-PSFRGDLASGGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLADLICMDDLLDSWADDEIPARWPSLTVSSEHPGAVTVVYKDRPGGRRQQPWSAAAVASLAEGTAMPPTAGAASVGAG----------GGATAAVPLPADGATSAETTGTVATTTTTGPAKKLSFRRSGASGNGAAKL----HSSSSFTLPTRLGR 1612
BLAST of mRNA_D-herbacea_F_contig117.1222.1 vs. uniprot
Match: A0A6H5KTV6_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTV6_9PHAE) HSP 1 Score: 909 bits (2348), Expect = 3.310e-273 Identity = 631/1201 (52.54%), Postives = 712/1201 (59.28%), Query Frame = 2
Query: 5906 AAETVGEPQHMDQLFDMLELDLGMGG--PFASAGFHVDANGGARRG----RSRSYLEEAGASSVWGSGNLRGGGRLNLDGVGAGGRKGGGEADGXRGGEGAAQKMFGGGSATDVDINASLWHILQALPVDPTMVKDLRSLRKAKKSWDDLLDPNRFYRFVYALQVVDAFCTSRANLSGPKAVESVLAWALRFCSLGGVDHLVSALKVVRETVSVANEAGGSASGSRLEARTLSAALLSRVLHRLFQLDASYFQACAPYDRWSPAALFHASPPQSALV---------------QPSTGYQQKEXXXXXXXGFSLPKLPGTAAAXXXXXXXXXXXX-------SLAASKLESVGEGVLSDAVHVLLSLLRQ---SAPVKPLASAVAHVLTLVSGLAGG-MSGGALALERHPALGSLLRALCLRVPDQAVRRAACAVLYRASHWQAIIVRDTGGAPAAGGDITTPAPTVGDGEVSATPSSTPEHLSRRRNGMPTTTSGSLARVLFDCLRSDIERVQMIPSARNSSNSSAGVXXXXXXXXXXXXXXXXXXXXXXGITDGNGTNGGVDGRNGLPPVFVPRLHLVEVTAFVAGLVHVMLHKSATATGPKQPVPIDRASNGTGTSIXXXXXXXXXXXXXXXSDERGAAASRGSDAVPASPPAXXXXXXDVGVGVD--GDVCS-SAAGGGVA----TAD------------EHAEAAADWLLREAARRLIAHEFTETFKSDAPDLLLASLLHALTVAVTGSIPRKRLAESLFARLAP--------------------------PSPSSPSGLIRFLYEGCLFPPARAESPPADKRANVAGALAVSGSVGXXXXXXXXXXXXXXXXXXXXXVAESSLGPRCKKRGSRRAAFALLAALCRGEEEHLRQTLGLLGGRDLVTRRFLDSDD-----GEEKGXXXXXXXXXXXXXXXXXXXXVGGVSG-----------------------VVVVGMDQPGSVG--SGEPWDYDPTSVLKESGQHVGLQNQAWKGAGGGRGEKEGWRQGATCYMNSLLQQLYHVPEFSLQLLGLAPDRRIEGNEENHPLQEEDEVLLQLQVLFASLRISQRKYYDTKPFCAVFKDYDGQPLRHAEQKDVNEFCTHLMHKLERSSKDAGALIDRVFGGTLVYQIISRDCEHTSERTEPFLVLTAEVQDKESLEGSLQLLVAGEMLT 9187
AAETVGEPQHM+QLFDMLELDLGM G A G +RRG + ++ E G WGSG+LR G + + G G RGG GGG VD NASLWHILQALP+DPT+++DLRSL KA+ SWD LLDP+R YRFVYALQVVDAFCTSR NLSGPK+VESVLAW LRFC LGGV+HLV+AL+VVR V NEAGG+A SRLEA TLSAALLSRVLHRLFQL+ASYF++C P +RWSPA LFHASPP + + ++GYQ+K G LP+L T+AA ++ A LESVG VLSD VH+L+SLLRQ PVKPL SAVAHVLTLV L+GG ++GGA ALERHPALGSLLRALC+R+PD +VRR+AC+VL+RAS WQA+ + + A G S+T + +R N LARVL LR+D+ RVQ +P AR SAG G+G G P+ VPRLHLVEVTAFVAGLVHVML ++ ++ P VP + G A P + G D G V S +AA GGV+ TA E A AA+WLL EAARRL AHEFTETF+SDAPD +L +LLHALTVAV GS RKRLAE+LF+RL+ P P GLIRFLYE CLFPPA E XXXXXXXXXXXXXXXXXXXXXVAESSLGPRCKKR SRRAAFALL+ALCRG E HLRQ LLGGRDLVT+ FLDSD G E G V V+G D G G SGEPWDYDPTSVLKESGQHVGLQNQ GATCYMNSLLQQLYHV +FSLQLLGL PDRR G E + PLQEEDEVLLQLQVLFA+LRISQRK+YDTKPFCAVF DYDGQPLRHAEQKDVNEFCTHL+HKLE SSK AG+LI +VFGGTL YQ+ISRDCEHTSERTEPF+VLTAEVQDKESLEGSLQLLVAGEMLT
Sbjct: 736 AAETVGEPQHMNQLFDMLELDLGMDGGXXXXXXXXXXSAGGDSRRGLPPNTAVAWHEPGGEGRAWGSGSLRDGVQCAAERRTGAGSMAGQSRGAWRGGX-XXXGGGGGGVEPTVDYNASLWHILQALPMDPTVLRDLRSLHKAESSWDALLDPSRCYRFVYALQVVDAFCTSRTNLSGPKSVESVLAWVLRFCRLGGVEHLVTALEVVRGKVQAVNEAGGAAEASRLEAWTLSAALLSRVLHRLFQLNASYFESCPPGERWSPATLFHASPPHLFMAAAXXXXXXXXXVPPGKEASGYQEK-------GGIPLPRLLDTSAAAASSAKEPSPVAQEPDPLVTVTAVNLESVGGSVLSDVVHLLISLLRQVHRGTPVKPLVSAVAHVLTLVGSLSGGGLAGGARALERHPALGSLLRALCIRIPDSSVRRSACSVLHRASAWQALGRDPSCCSEARNGXXXXX-------XXSSTAKLGKDGAEKRNN--------ELARVLLTSLRTDLARVQAVPFAR-----SAGPGAPVRVGLSPVRRARGDATAAETAAIGSGVGGSA-------PIVVPRLHLVEVTAFVAGLVHVMLENASLSSFPPPAVPPRQPRPAAGLP-QQQELSTNRQAPRHPQQXXXXXXXXXXXXXXARPSVLPADRDETGTSKDAAGLVASVAAAAGGVSRGADTASVNVNGERDEGERELASTAAEWLLEEAARRLAAHEFTETFESDAPDHVLITLLHALTVAVAGSPRRKRLAETLFSRLSSSXXXXXXXXXXXXXXXXXSATGVARVPRP----GLIRFLYERCLFPPASREPXXXXXX--------------XXXXXXXXXXXXXXXXXXXXXVAESSLGPRCKKRESRRAAFALLSALCRGNEAHLRQAFVLLGGRDLVTKGFLDSDMDSGNLGSEDGSASDSSVIAVADGSRGASHGVATVAGDGAEEATAAXXXXXXXXXXXPSTPAATLEDASGGAGVRSGEPWDYDPTSVLKESGQHVGLQNQ-----------------GATCYMNSLLQQLYHVQDFSLQLLGLVPDRRAGGGESSDPLQEEDEVLLQLQVLFATLRISQRKFYDTKPFCAVFMDYDGQPLRHAEQKDVNEFCTHLLHKLEGSSKQAGSLIAKVFGGTLAYQVISRDCEHTSERTEPFIVLTAEVQDKESLEGSLQLLVAGEMLT 1865
BLAST of mRNA_D-herbacea_F_contig117.1222.1 vs. uniprot
Match: A0A6H5L1L9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1L9_9PHAE) HSP 1 Score: 648 bits (1671), Expect = 5.840e-203 Identity = 425/812 (52.34%), Postives = 486/812 (59.85%), Query Frame = 1
Query: 388 PLLRVFRGCSKTIWPDDQESARVGPDAIGWRIEVFDVHGQLARYRRPEPPSDD--AKWTPSASDANKWHLVTVIGRCPPLSADPDANKQSGPGQV-----RQEKQVEESAAVGR-------------ETETEPLRVDSSSSVFLIEFDGDRKASLDLSHFSIKWVSFSEMNEDNQHGGLLAQNNGGGEGSVGRTSANVA--DGSVRLANDDTDVGTRVDVWWPRYNSYFRATIKRYDASQGTHTLHYEDGEVRDSDMSKRGFRVCRAPK-----------QQXXXXXXXXXXXXXXXXASGLDATSLAGQHAQSSPSRKRHVSLAPRPPAEYAPDTSAYVIAALNRFGEAGGMAPLAQRLSSGRAPFNEVLETFRLAKALRTHASSRAMKEVNWTLKECAAGALLSVAPESLRATTKADIAECLSSVKDLALTGSGA-KAAANPPLVLVQELEQL---------------ELGMAMKVFCCPSLERRLAGLMHICGLVTLAKQREGPATNYAPXXXXXXXSGESGRSAWVTAEAMEEWLVEGGFLEELFGSRMHVELAKRSEPILTFLAKRNAISTSQLDLLWSSTLGKHEAVVRVMCNVVVNLVPFLSPHKRLHLFSCVAQTPFYRYTEQTLDLVYLFTVKALEAHRTMKLPAGKVGDDTGGSAHPSAPAGDDSAXXXVAAGGKGGLRRGQVLHCREREWMGYGYGLLWLFVQDSRDQVTGGGAXXXXXXXAGVKGGVSAKLTSMAAGYLVSLLKEPEVAQELWPLITGCVDNVVARRSVPSSLEVLRRAIATLPAHEAKSWFGGSRSKEH 2676
PLL+ + + P + RVGPDAIGW I+V DV G+LA+Y+ PP DD +WT +DAN WH VTV+GR + D++ +G V R+ K EE+ G ET +P S SS+FL+EF+ R A+LDLS IKWV F + G R D L+ DD DVGTRVDVWWPRYNSYFRATI+RYD + GTHTL YEDGE+RDSDMSKRGFRVC P XXXXXXXXXXXXXXXX ++ R+R LAPRPPA+YAPD S YV+AA+NRFGEAGGMA LAQRLS GR F EVLETFR+ KALR HASSRA+KE NWTLKECAA ALLSV PES+RA TK +IAE +SSV+DLALT SG A A+ PLVL+QELE E+G A +VF CPSLERRLAGLMHICGLVTLA++ G T +GES +AW T ME+WLVE GFLEELFGS MHVELA VVRVM VV+NLVPFLSPHKRLHLFSCVA+TPF +YTEQTL LV GGS + + R VLHCREREW GYGYGLLWLFVQD+ DQ TG G KG VSA L S+AAGYLVSLLKEPEV+QELWPL+T C++NVVARRSVP+SLEVLRRAIATLPAHEAKSWFGGSRSKE+
Sbjct: 16 PLLKRY-----FLHPSPPPAGRVGPDAIGWCIDVLDVPGELAQYQFSAPPLDDPAVEWTALTADANMWHRVTVVGRPSGVGDGGDSSSSTGADVVGDEERREGKYREEATRPGSSXXXXXXXXXXXXETSQQPR---SPSSLFLVEFESGRTATLDLSRLDIKWVQFCGADSSGVRQGSRGAQEQXXXXXXSRAPPGFGEWDDGDGLSYDDNDVGTRVDVWWPRYNSYFRATIERYDPNVGTHTLFYEDGEIRDSDMSKRGFRVCYRPPGWTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAWGRRRPSPLAPRPPADYAPDASMYVLAAVNRFGEAGGMATLAQRLSGGRPSFGEVLETFRIGKALRAHASSRAVKETNWTLKECAAAALLSVPPESMRAATKIEIAESVSSVRDLALTLSGGGSATAHAPLVLLQELEXXXXXXXXXXXXXXXGGEVG-ANEVFRCPSLERRLAGLMHICGLVTLAERGPGAVTTNGSLPP----AGESRTAAWATPRVMEDWLVEVGFLEELFGSSMHVELA----------------------------------VVRVMSPVVLNLVPFLSPHKRLHLFSCVARTPFSKYTEQTLHLV-------------------------GGSVYTA---------------------RKAVLHCREREWEGYGYGLLWLFVQDAPDQGTGN--KRHGGGSGGEKGAVSAALVSLAAGYLVSLLKEPEVSQELWPLMTRCMENVVARRSVPASLEVLRRAIATLPAHEAKSWFGGSRSKEN 732
BLAST of mRNA_D-herbacea_F_contig117.1222.1 vs. uniprot
Match: A0A835YQG3_9STRA (USP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQG3_9STRA) HSP 1 Score: 170 bits (430), Expect = 6.440e-44 Identity = 90/163 (55.21%), Postives = 114/163 (69.94%), Query Frame = 2
Query: 8702 MNSLLQQLYHVPEFSLQLLGLAPDRRIEGNEENHPLQEEDEVLLQLQVLFASLRISQRKYYDTKPFCAVFKDYDGQPLRHAEQKDVNEFCTHLMHKLERSSKDAGALIDRVFGGTLVYQIISRD--CEHTSERTEPFLVLTAEVQDKESLEGSLQLLVAGEML 9184
+NS+LQQLYH FS L+G AP RR P +E+DE+L +LQVLFASL + QR+Y+DT+P C+ F DYDG+P+ AEQKD EFC+ L+ KLERSS A L+ FGGTL YQI+ R+ C HTS R EPFL+LTAEVQ K++L +L L +GE L
Sbjct: 1 LNSVLQQLYHTRAFSGPLMGAAPARR--------PGREQDELLFKLQVLFASLHVGQRRYHDTRPLCSSFLDYDGRPMSLAEQKDAYEFCSMLLDKLERSSDAARELVKATFGGTLQYQIVPREPGCAHTSTRDEPFLMLTAEVQTKDTLAAALDLFTSGETL 155
BLAST of mRNA_D-herbacea_F_contig117.1222.1 vs. uniprot
Match: A0A7S3MAA4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAA4_9STRA) HSP 1 Score: 156 bits (394), Expect = 9.000e-38 Identity = 88/210 (41.90%), Postives = 124/210 (59.05%), Query Frame = 2
Query: 8573 WDYDPTSVLKESGQHVGLQNQAWKGAGGGRGEKEGWRQGATCYMNSLLQQLYHVPEFSLQLLGL-APDRRIEGNEENHPLQEED----EVLLQLQVLFASLRISQRKYYDTKPFCAVFKDYDGQPLRHAEQKDVNEFCTHLMHKLERSSKDAGALIDRVFGGTLVYQIISRDCEHTSERTEPFLVLTAEVQDKESLEGSLQLLVAGEMLT 9187
W+YDP ++LKE +VGL NQ G TCYMNS +QQL+H+P F LL + A + + N+ L+E+ E+L QLQV+F + SQ++YYDT PFC F DYD +P+ EQKD+NEF L K+E + K+A AL+ G +V++ S + + SER E F +LTAEV+DK +LE SL+L A E+ +
Sbjct: 5 WNYDPDTLLKEPDAYVGLCNQ-----------------GGTCYMNSFIQQLFHIPAFKTGLLRINAAAKTAKDATSNNSLEEKPDPNVELLFQLQVMFGFMNFSQKRYYDTLPFCRTFLDYDAEPISLTEQKDINEFAGMLFDKIEHN-KEAAALLASTIQGKIVWRTRSLETPYKSEREETFYMLTAEVKDKATLEDSLELFTADELFS 196
BLAST of mRNA_D-herbacea_F_contig117.1222.1 vs. uniprot
Match: A0A4D9CWC4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWC4_9STRA) HSP 1 Score: 164 bits (415), Expect = 1.950e-36 Identity = 225/908 (24.78%), Postives = 335/908 (36.89%), Query Frame = 1
Query: 373 RDHGRPLLRVFRGCSKTIWPDDQ-ESARVGPDAIGWRIEVFDVHGQLARYRRPEPPSDDAKWTPSASDANKWHLVTVIGRCPPLSADPDANKQSGPGQVRQEKQVEESAAVGRETETEPLRVDSSSSVFLIEFDGDRKASLDLSHFSIKWVSFSEMNEDNQHGGLLAQNNGGGEGSVGRTSANVADGSVRLANDDTDVGTRVDVWWPRYNSYFRATIKRYDASQGTHTLHYEDGEVRDSDMSKRGFRVCRAPKQQXXXXXXXXXXXXXXXXASGLDATSLAGQHAQSSPSRKRHVSL---------------------------APRPPAEYAPDTSAYVIAALNRFGEAGGMAPLAQR-------LSSGRAPFNEVLETF-RLAKALRTHASSRAMKEVNWTLKECAAGALLSVAPESLRATTKADIAECLSSVKDLALTGSGAKAAANPPLVLVQELEQLELGMAMKVFCCPSLERRLAGLMHICGLVTLAKQREGPATNYA-PXXXXXXXSGESGRSAWVTAEAMEEWLVEGGFLEELFGSRMHVELAKRSEPILTFLAKRNAISTSQLDLLWSSTLGKHEAVVRVMCNVVVNLVPFLSPHKRLHLFSCVAQTPFYRYTEQTLDLVYLFTVKALEAHRTMKLPAGKVGDDTGGSAHPSAPAGDDSAXXXVAAGGKGGLRRG---------------------------------------------------------QVLHCREREWMGYGYGLLWLFVQDSRDQVTGGGAXXXXXXXAGVKGGVSAKLTSMAAGYLVSLLKEPEVAQELWP----LITGCVDNVVARRSVPSSLEVLRRAIATLPAHEAKS------WFGGSRSKEHSVPGALEALQRTHKLLPALLEELEGYHAAVALHYGR 2784
++HGRP+ R G +WP+++ + GPD G R RP K +W L + D ++G V P R++ D +LDL+ ++W+ L+ + SA S+ L + DVGTRV VWW + Y+ TI YD G H + Y+DG+VR M + F + P++ +S + S + +SP +R SL A RPPA + S ++A +N F GG+ L + L S R P + + L LR ++ + + +KE G +L++ E R TK D+ + DL LT G A+ ++ + +A + P LE+RL GL +I RE + A P S S + + L + ++G+ H+E+ RS +L FLA +A+ + LDLLW+++LGKHEAVVR ++++L+P LSP R HLFS +A F YT +TL+L+YL T KA + LP G D G + GGKGG RG V+H R EW YG+GLLW FV D + + S LT +A +VSL++E E E W L+ CV+NV RSV +SL +L R AT P + GG+R+ + LE Q L ++EE+ + V YGR
Sbjct: 160 QEHGRPIRRRIDGTEVLMWPEEEVDEEGGGPDGEGMRERAIG---------RPVAVQQRGK--------EEWKLGVIY----------DFESRTGMSWVH--------------FGPSPWRIEGEEGGXXXXXD----VALDLTTVRVEWLQTEGSASAQTTVRLVPSSLXXXXXXXXXXSAT---SSLALGGNARDVGTRVKVWWGKDQVYYTGTISSYDECTGQHVVAYDDGDVRKYLMRHKEFEILNGPEKTSVASLPVPSRR-----SSSGEEDSPSPLAETASPGERRGPSLPTSPPXXXXXXXXXXXXXXWPHSLWLAARRPPASHQ-GVSCLLVAHINLFVNLGGLRVLGRHFYGRGSPLRSSRPPSLAGIRFYLALLHRLRGRLETQPLSVTVFQMKETVPGRVLALEEEDRRGLTKQDLKTLPQQLHDL-LTLLGVSRAS-----VISATDSFRFSLACLLLRTPQLEKRLYGLAYI---------REALSKTAALPSLPSSLASPPS-----LPPSLLLHLLRKTEVFPTVYGATTHLEILSRSPFLLHFLAAHHALHSHHLDLLWNTSLGKHEAVVRAFHALLLDLLPSLSPALRRHLFSRIASLSFRDYTAETLELLYL-TTKAAWCATRLGLP----GSDGEGR--------EPVPGLLATLGGKGGRHRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREKGEAPMVVHTRSGEW--YGFGLLWRFVMDEGE--------------VRERHVPSVALTKVAIELMVSLMREEE---EAWGAREGLLLKCVENVRGHRSVLASLTLLARTAATYPVGGGREGGQXXXXXGGNRTMAWVLGEWLEKEQGLWSSL--VVEEVVWFQEEVRRVYGR 959
BLAST of mRNA_D-herbacea_F_contig117.1222.1 vs. uniprot
Match: A0A7S2WVV4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVV4_9STRA) HSP 1 Score: 132 bits (332), Expect = 6.690e-32 Identity = 70/133 (52.63%), Postives = 86/133 (64.66%), Query Frame = 2
Query: 8696 CYMNSLLQQLYHVPEFSLQLLGLAPDRRIEGNEENHPLQEEDEVLLQLQVLFASLRISQRKYYDTKPFCAVFKDYDGQPLRHAEQKDVNEFCTHLMHKLERSSKDAGALIDRVFGGTLVYQIISRDCEHTSER 9094
CYMN+LLQQLY+VP+F LL + P +E P ++ VL QLQVLF L +SQ+K+YDT PFC FKDYDG P+R EQKDV EF T L KLE S D AL+ FGGTLV QIIS + + ++
Sbjct: 1 CYMNALLQQLYYVPDFRESLLRVPPP------DEQDP---DESVLFQLQVLFGYLSLSQKKFYDTMPFCKAFKDYDGAPIRVEEQKDVYEFATMLFEKLEASHPDVKALLANTFGGTLVNQIISAEADSRGKK 124
BLAST of mRNA_D-herbacea_F_contig117.1222.1 vs. uniprot
Match: A0A482SHC7_9ARCH (USP domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SHC7_9ARCH) HSP 1 Score: 149 bits (377), Expect = 6.940e-32 Identity = 85/205 (41.46%), Postives = 122/205 (59.51%), Query Frame = 2
Query: 8573 WDYDPTSVLKESGQHVGLQNQAWKGAGGGRGEKEGWRQGATCYMNSLLQQLYHVPEFSLQLLGLAPDRRIEGNEENHPLQEEDEVLLQLQVLFASLRISQRKYYDTKPFCAVFKDYDGQPLRHAEQKDVNEFCTHLMHKLERSSKDAGALIDRVFGGTLVYQIISRDCEHTSERTEPFLVLTAEVQDKESLEGSLQLLVAGEMLT 9187
WDYDP +L+ SG ++GL NQ G TCYMN+ +QQLYH F+ QLL ++ E E +H +LLQ+Q++FA L+ SQ++ YDT PFC DYDGQP+ +EQKD+NEF L KLE++S A L+ + GT ++Q S + + SER E F ++T EV++K++L +L+L VA E+ T
Sbjct: 1797 WDYDPNLILRSSGDYIGLCNQ-----------------GGTCYMNAFIQQLYHAQTFTDQLLSVST--YAEEAEYSH-------LLLQMQMMFAYLKYSQKRVYDTLPFCKALIDYDGQPISLSEQKDINEFAGMLFDKLEKNSA-AAELLAQTIQGTYIWQTKSLETTYYSEREEKFYMITVEVKNKKTLLEALELTVAEELFT 1974
BLAST of mRNA_D-herbacea_F_contig117.1222.1 vs. uniprot
Match: L8GRS0_ACACA (Ubiquitinyl hydrolase 1 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GRS0_ACACA) HSP 1 Score: 145 bits (366), Expect = 1.360e-30 Identity = 84/192 (43.75%), Postives = 115/192 (59.90%), Query Frame = 2
Query: 8615 HVGLQNQAWKGAGGGRGEKEGWRQGATCYMNSLLQQLYHVPEFSLQLLGLAPDRRIEGNEENHPLQEEDEVLLQLQVLFASLRISQRKYYDTKPFCAVFKDYDGQPLRHAEQKDVNEFCTHLMHKLERSSK--DAGALIDRVFGGTLVYQIISRDCEHTSERTEPFLVLTAEVQDKESLEGSLQLLVAGEML 9184
+VGLQNQ GATCYMNSL+QQL+ +P F +L LA D + + D +L Q+QVLF++L S ++YYDT FCA +KDYDG+P+ +Q D NEF +L KLE K + L+ VFGG L Q+I ++C H SER EPF L+ E+++K+ +E SL+L +AGEML
Sbjct: 1562 YVGLQNQ-----------------GATCYMNSLMQQLFLIPRFRQGIL-LADDNSADKS---------DSLLYQMQVLFSNLMKSVKRYYDTIEFCAAYKDYDGKPVNTGQQMDANEFFNNLFAKLEDHLKGSEEEKLLSDVFGGELSNQLIPKECTHRSERLEPFYSLSIEIKNKKDIEESLKLFIAGEML 1726
BLAST of mRNA_D-herbacea_F_contig117.1222.1 vs. uniprot
Match: X6N2M1_RETFI (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6N2M1_RETFI) HSP 1 Score: 141 bits (356), Expect = 7.020e-30 Identity = 92/222 (41.44%), Postives = 120/222 (54.05%), Query Frame = 2
Query: 8573 WDYDPTSVLKESGQHVGLQNQAWKGAGGGRGEKEGWRQGATCYMNSLLQQLYHVPEFSLQLL-------GLAPDRRIEGNEEN-------HPLQEEDEVLLQLQVLFASLRISQRKYYDTKPFCAVFKDYDGQPLRHAEQKDVNEFCTHLMHKLER--SSKDAGALIDRVFGGTLVYQIISRD--CEHTSERTEPFLVLTAEVQDKESLEGSLQLLVAGEML 9184
W Y PT + ++VGL+NQ GATCYMNSLLQQL+ +F +L +A + GNEE H + +D VL Q+Q+LF L ISQ+K+YDT P C K YDG PL EQ+DVNEFC L +LE + D I FGG LV QIIS+D C+H SE+ E FL ++ V++K +L SL L V G++L
Sbjct: 451 WKYHPTDEERFPVRYVGLKNQ-----------------GATCYMNSLLQQLFINEDFRRDILEARLHTSAMAEENL--GNEEKESLELRKHGILPKDSVLYQMQLLFGYLMISQKKFYDTMPLCTTLKGYDGNPLPLGEQQDVNEFCNRLFDELEHDLNKTDRMDAIRENFGGYLVSQIISKDDTCDHRSEQVERFLTVSLTVKNKANLRESLDLYVQGDLL 653 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig117.1222.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig117.1222.1 >prot_D-herbacea_F_contig117.1222.1 ID=prot_D-herbacea_F_contig117.1222.1|Name=mRNA_D-herbacea_F_contig117.1222.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=1185bp MIEELEGRITKARKALLAGPACLDEQSQNVKMLISDQLPRAVEELQRRPMback to top mRNA from alignment at D-herbacea_F_contig117:258550..288288+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig117.1222.1 ID=mRNA_D-herbacea_F_contig117.1222.1|Name=mRNA_D-herbacea_F_contig117.1222.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=29739bp|location=Sequence derived from alignment at D-herbacea_F_contig117:258550..288288+ (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig117:258550..288288+ >mRNA_D-herbacea_F_contig117.1222.1 ID=mRNA_D-herbacea_F_contig117.1222.1|Name=mRNA_D-herbacea_F_contig117.1222.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=7110bp|location=Sequence derived from alignment at D-herbacea_F_contig117:258550..288288+ (Desmarestia herbacea DmunF female)back to top |