mRNA_D-herbacea_F_contig1161.1204.1 (mRNA) Desmarestia herbacea DmunF female
|
Overview
Homology
BLAST of mRNA_D-herbacea_F_contig1161.1204.1 vs. uniprot
Match: A0A6H5K2V6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2V6_9PHAE) HSP 1 Score: 738 bits (1904), Expect = 1.230e-253 Identity = 445/883 (50.40%), Postives = 540/883 (61.16%), Query Frame = 1
Query: 4 LLPSPTTPSARFARDVMAGAKAQAWVEEVIGERLPKGDFAEAFKNGQGLCRLINTFRPGSISKIETSSSPFKQMANISAFIQACRALGVHEQALFETLDLYNEKRLQQVVRCLFSLSEIVRTNMPDFPGPHLSTPEKPDVDPAVKAVVDISKGRHPHSHGHSAAMPPFAPGWGSSTTAVNLDGTMADPAAAAGGPCTPRALHLALPKHVGKTG---NGCCLSPGAHASGQLTYGIYEGGG---------------------------------------VAASKCLAKDGSDGEGVGLVEPGTAEALAGQRKVDDKCGGAASEEGGRAGGAG-EFGNSTVPVVSTPR--HPLSVPI----GVNTPGGS--------------GLSAAP---MPRSGTDREEELKRRKEAIAKHDAEMEVALWIEGVSGVTFPGRFWSSLKDGVLLCKMMNVIQPGLVPSINEAHAPFPEMENITAFLAACRKLGVAEHSLFDTKDLHEKRDVALVVRCLHVLGATVQSSVPDFKGPFLGKKTESWSRVNARGLRKRLGKGPGARGGIRASGLHPKGMEQVCAADAILLEHPDPTVTMTPAESPSGKRQSRPREAWDSGAGLGGTVAAMPGS-------LEDAVAAAAAEEEGXXSGPVSGRVNNANTPSPLRRVGGAVGDGXXXXXXXXTLLPPVIFEDEVANVGGEEEGRANGVGKEGGAPTVVRSRAETGLTRRGAGXXXXXXXXXXXXXSNKVVEDRGEGVISQIQKFVELHTQMPWRISGDMYESLRDGWQLALLANVLRAGAVRRVHNSIQPAKHVHNIANFLIACRRMGVARALLFDIDDLYANRSQTKVARTLLALRALAADPDFSRARPSSLMGSSLLISAASKA 2433
+LPSP+TPSARFARD AG KA+ WVEEVIG RLP+GDFA FK+GQGLC L+NTFRP SI KIE S+SPF QMANIS+F++ACR LGV E LFETLDL+NE RL QVVRCLFSLSE+VRT MP + GP+L P+KP+VDPAV +VDI+KG + G AP S+T++ P L+LPKH G+ G + CLSP A+ +G+LTYG+YEGGG V+ ++ + +D + EP +A AL G+R GA + EG GG E+ S + V +TPR +P+ +P G +TP G G A+ RS + E++ +RR+E A+HDAEMEVALWIEGV+G TFPG+FWSSLKDGVLLC ++N I+PGLVP +N + F E+ENI+AFL+ CRK+GV EHSLFDTKDLHEKRD+ +VVRCLHVLGA VQS+VPDF+GPFLGKK+E+ S VNARGLRKRLGKGPGARGGI H G + + + +E PDPT TMTPAESPSGKR SR REA DS G G A P S L V A EE +G S V R G G L + GG GGA V R +G + + ++ GEGV+SQ+Q+FVELHT+ PWR+SGDM+ESLRDGWQLALLAN LR GAVR VHNSIQP KH+ NIA+FLIACRRMGVARALLFDI+DLY RS T+VARTLLALRALAADPDF+ ARPSSLMG+SLL++AA+ A
Sbjct: 18 MLPSPSTPSARFARDASAGLKARHWVEEVIGRRLPEGDFAAGFKDGQGLCELVNTFRPASIPKIERSASPFHQMANISSFLKACRMLGVSEHVLFETLDLFNENRLPQVVRCLFSLSELVRTTMPSYHGPYLGAPDKPEVDPAVLHLVDIAKGNVVPAAG-------VAPAGASATSSCKKGSRXXXXXXXXXAGLEP----LSLPKHDGEDGATSSRRCLSPAAYEAGKLTYGVYEGGGXXXXXXXXXAPAKPPRTPGAARTARLRAARTPGPDDACVVSGAQAAGRGTTDAQRWQAQEPASAAALGGKRNGGA---GAVTREGSEGGGGVVEYAESALSVANTPRRCNPMIMPSPRAEGASTPRGEVGGGXXXXXXXXXXGAVASDYYGFGRSSSSVEDQARRRREVTAQHDAEMEVALWIEGVTGETFPGKFWSSLKDGVLLCNVLNSIKPGLVPHVNPSRGTFLELENISAFLSGCRKVGVPEHSLFDTKDLHEKRDMQVVVRCLHVLGAAVQSTVPDFRGPFLGKKSEALSIVNARGLRKRLGKGPGARGGIHTLTAHKGGAGEYVGSGDVPIEQPDPTATMTPAESPSGKRASRRREASDSAGGSGVVAAGTPASPRAIAEGLSGGVLPAVILEEEAPAGMTSAVVRVERQGRRGARAAEEAGAGSSGRQNLAGLFADAALAADPREGGGR-----------GGA--VALRRTTSGASGVSGSQQRRSRGAHRQLQHQQRKDEDGEGVVSQVQRFVELHTRQPWRVSGDMHESLRDGWQLALLANALRPGAVRCVHNSIQPVKHIQNIASFLIACRRMGVARALLFDIEDLYEKRSNTRVARTLLALRALAADPDFALARPSSLMGTSLLVNAAAAA 873
BLAST of mRNA_D-herbacea_F_contig1161.1204.1 vs. uniprot
Match: A0A7R9YD67_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YD67_9STRA) HSP 1 Score: 217 bits (552), Expect = 2.960e-59 Identity = 159/449 (35.41%), Postives = 219/449 (48.78%), Query Frame = 1
Query: 46 DVMAGAKAQAWVEEVIGERLPKGDFAEAFKNGQGLCRLINTFRPGSISKIETSSSPFKQMANISAFIQACRALGVHEQALFETLDLYNEKRLQQVVRCLFSLSEIVRTNMPDFPGPHLSTPEKPDVDPAVKAVVDISKGRHPHSHGHSAAMPPFAPGWGSSTTAVNLDGTMADPAAAAGGPCTPRALHLALPKHVGKTGNGCCLSPGAHASGQLTYGIYEGGGVAAS-KCLAKDGSDGEGVGLVEPGTAEALA-------GQRKVDDKCGGAASEEGGRAGGAGEFGNSTVPVVSTPRHPLSVPIGVNTPGGSGLSAAPMPRSGTDREEELKRRKEAIAKHDAEMEVALWIEGVSGVTFPGRFWSSLKDGVLLCKMMNVIQPGLVPSINEAHAPFPEMENITAFLAACRKLGVAEHSLFDTKDLHEKRDVALVVRCLHVLGATVQSSVP 1368
D A AQ W+E V G GDF E+ K+GQ LC L+N R GS+ KI S PFKQM NIS F++ACR LGV E +FET+DL+ K L VV+C+++L V+T +P+F GPHL PE + + D ++ S A + F+ GS+ T + D A G T A ++ V K +G + GI E + S L D + G P + LA G ++ A+ GG +F ++ + P V GG GL A +L + + +D E EV WIE V+G FPG F SLKDG +LCK++N I+PG + IN + PF +MEN++ FL CR LGVAEH LF+T DL+E +D+ +VV C+H LG VQ +VP
Sbjct: 11 DPEAMQDAQEWIEAVTGVAFA-GDFGESLKDGQMLCMLVNAIRRGSVRKINESKLPFKQMENISNFLRACRTLGVAEHDVFETVDLFELKDLSVVVKCIWALGRAVQTTVPEFEGPHLGVPETTRTTLSRPSNFDAARP----SFTSMATLGRFS--MGSAATMQKQENRYWD---ATSGNRTVGAGDTSV---VSKLQSG-------------SSGIMERKKIVVSGPTLGADAAAGRAEATNSPAASPRLAPPKPPRLGGEYINSDTAKTAALAPPSVGGLEQFAETSYRQRAHTEPPAPVSA---RGGGYGLDA------------QLAQIRLDKYDYDLEAEVKEWIEAVTGEAFPGGFGESLKDGRILCKLINAIKPGSIRIINTSKLPFKQMENVSVFLRNCRALGVAEHDLFETVDLYELKDLGVVVNCIHALGGAVQKTVP 418
BLAST of mRNA_D-herbacea_F_contig1161.1204.1 vs. uniprot
Match: A0A6H5L3X7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3X7_9PHAE) HSP 1 Score: 204 bits (520), Expect = 3.590e-53 Identity = 164/514 (31.91%), Postives = 217/514 (42.22%), Query Frame = 1
Query: 28 SARFARDVMAGAKAQAWVEEVIGERLPKGDFAEAFKNGQGLCRLINTFRPGSISKIET--SSSPFKQMANISAFIQACRALGVHEQALFETLDLYNEKRLQQVVRCLFSLSEIVRTNMPDFPGPHLSTPEKPDVDPAVKAVVDISKGRHPHSHGHSAAMPPFAPGWGSSTTAV---------------------------------NLDGTMADPAAAAGGPCTPRALHLALP---KHVGKTGNGCCLSPGAHASGQLTYGIYEGGGV------------AASKCLAKDGSDGEGVGLVEPGTAEALAGQRKVDDKCGGAASEEGGRAGGAGEFGNSTVPVVSTPRHPLSVPIGVNTPGGSGLSAAPMPRSGTDREEELKRRKEAIAKHDAEMEVALWIEGVSGVTFPGRFWSSLKDGVLLCKMMNVIQPGLVPSINEAHAPFPEMENITAFLAACRKLGVAEHSLFDTKDLHEKRDVALVVRCLHVLGATVQSSVPDFKGPFLG-KKTESWSR 1416
SA + D+ A + QAWVE+V GE +GDFA+ ++G LC+L+NT +P S+ +I FKQM NIS FI+ CRA+GV E +LFET+DLY K + VV+CL +L V+ N P+F GPHL P V A V + R P + H+A +L + G H G NG C S GG V + ++ K S GV G A+ + A P P G GG GL A EL R+EA WIE V+G F F LKDG LC ++N I+PG V +N++ PF +MEN++ FL ACR +GVAEHSLF+T DL+E +D+ LVVRCLH LG TVQ+S P++ GP LG K+TE+ R
Sbjct: 10 SAGYGGDLQA--EVQAWVEQVTGEPF-EGDFADGLRDGVRLCKLLNTIKPSSVRRINPFKEGQKFKQMENISNFIRGCRAIGVPEYSLFETVDLYEGKDVGLVVKCLHALGGTVQKNCPEFGGPHLGLKPVSRAPPRVAAAVPTAAARAPQAFDHAAVKANGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYRDDLSSRFTETVQVTGSSXXXXXXXXXXXXXXSHSGPAANGSCRHTSGSKSPPHRPAPPYGGAVIGNGQQHSARPQSPARPYKKSSSPTNGVRQQVSGAPRAV--------------------SPSAPPXXXXXXXXXXXXMPPRRSPTG-GRGGGYGLDA------------ELAARREANYDXXXXXXAQEWIEDVTGERFAEGFGEELKDGRKLCLLINQIKPGAVRRVNDSRMPFKQMENVSNFLKACRAVGVAEHSLFETVDLYEGKDLGLVVRCLHALGQTVQNSCPEYNGPRLGIKQTEANKR 487
BLAST of mRNA_D-herbacea_F_contig1161.1204.1 vs. uniprot
Match: A0A5D6XYZ9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYZ9_9STRA) HSP 1 Score: 199 bits (507), Expect = 5.230e-52 Identity = 159/449 (35.41%), Postives = 207/449 (46.10%), Query Frame = 1
Query: 64 KAQAWVEEVIGERLPKGDFAEAFKNGQGLCRLINTFRPGSISKIETSSS-PFKQMANISAFIQACRALGVHEQALFETLDLYNEKRLQQVVRCLFSLSEIVRTNMPDFPGPHLSTPEKPDVDPAVKAVVDISKGRHPHSHGHSAAMPPFAPGWGSSTTAVNLDGTMADPAAAAGGPCTPRALHLALPKHVGKTGNGCCLSPGAHASGQLTYGIYEGGGVAASKCLAKDGSDGEGVGLVEPGTAEALAGQRKVDDKCGGAASEEGGRAGGAGEFGNSTV-PVVSTPRHPLSVPIGVNTPGGS--GLSAAPMPRSGTDREEELKRRKEAIAKHDAEMEVALWIEGVSGVTFPGRFWSSLKDGVLLCKMMNVIQPGLVPSINEAHAPFPEMENITAFLAACRKLGVAEHSLFDTKDLHEKRDVALVVRCLHVLGATVQSSVPDFKGPFLGKK 1398
+A+ W+E V + + + DF E ++G LC L+N PG + ++ET S PFK M N+SAF++ACR +GV+E LFET+DL+ K L VVRC+F+L V+ N PDF GP L E AVK ++ + + A P GS T LD +A + G + H A + L A G L EP T+ +R V ++ FG+ T P P + +V N S GLS A A A AE E WIE V G F F SLKDGVLLC +MN I+PGL+P I + PF +MENITAFL ACR +GVAE LF+T DL E + V LVV+C+H LG VQ VP+F GP LG K
Sbjct: 34 EARDWIEAVAHKDIGE-DFGEGLRDGVVLCALVNAIHPGIVPRVETKSKMPFKLMENVSAFLRACRKIGVNEFDLFETVDLFELKDLGHVVRCIFALGRAVQKNYPDFAGPALGVKE------AVKNERTFTEEKL-----NEARNAPALVNLGSLRTMARLD--IARTNSVTFGAEAQTSFHRAPXXXXXXSDEKVELVTQVRA----------------------------GKALFEP-TSLMYKPERTVAER-----------------FGDLTPSPPKPAPENSENVAELANAVASSIPGLSPAL-----------------AAAGPTAEEEAQEWIESVLGEQFLASFGDSLKDGVLLCHLMNKIRPGLIPRIQTSPMPFKQMENITAFLRACRAVGVAEFDLFETVDLFELKKVPLVVKCVHALGRAVQKHVPEFDGPTLGAK 405
BLAST of mRNA_D-herbacea_F_contig1161.1204.1 vs. uniprot
Match: K3WZS5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZS5_GLOUD) HSP 1 Score: 184 bits (468), Expect = 2.130e-46 Identity = 154/453 (34.00%), Postives = 203/453 (44.81%), Query Frame = 1
Query: 64 KAQAWVEEVIGERLPKGD-FAEAFKNGQGLCRLINTFRPGSISKIETSSS-PFKQMANISAFIQACRALGVHEQALFETLDLYNEKRLQQVVRCLFSLSEIVRTNMPDFPGPHLSTPEKPDVDPAVKAVVDISKGRHPHSHGHSAAMPPFAPGWGSSTTAVNLDGTMADPAAAAGGPCTPRALHLALPKHVGKTGNGCCLSPGAHASGQLTYGIYEGGGVAASKCLAKDGSDGEGVGLV-----EPGTAEALAGQRKVDDKCGGAASEEGGRAGGAGEFGNSTVPV-VSTPRHPLSVPIGVNTPGGSGLSAAPMPRSGTDREEELKRRKEAIAKHDAEMEVALWIEGVSGVTFPGRFWSSLKDGVLLCKMMNVIQPGLVPSINEAHAPFPEMENITAFLAACRKLGVAEHSLFDTKDLHEKRDVALVVRCLHVLGATVQSSVPDFKGPFLGKK 1398
+A+AW+E V G + GD F E ++G LC L+N P + +IET S PFK M N+S+F++ACR +GV E LFET+DL+ K L VVRC+F+L V+ PDF GP L E +VK ++ + + A P GS T LD + G A H Q+ G A A + E V P E G +D SE + N+ V V P P++ I GLS P ++G EEE + WIE V F F SLKDGV+LC +MN I+PG++ I + PF +MENITAFL ACR +GVAE LF+T DL E + V LVV+C+H LG VQ +VP+F GP LG K
Sbjct: 34 EARAWIEAVSGMAI--GDEFGEGLRDGVILCTLVNKIHPDIVKRIETKSKMPFKLMENVSSFLRACRTMGVSEFDLFETVDLFELKDLGHVVRCIFALGRAVQKTYPDFNGPTLGVKE------SVKNERTFTEEKL-----NEARAAPSLVNLGSFRTMERLDVSR--------GNSVTFGAEAATSFHRAPXXXXXXXEEKVEFVSQVRAGKAFFDHKAFFDRPAPVRAQSESVASRFGSSWSPAKPEKPTGSENPED------SEN------VAQLANAIEQVSVEEPAAPIASSI-------PGLS--PAKQTGPTPEEEAQE----------------WIESVLNEKFLTSFGDSLKDGVMLCTLMNKIRPGIISRIQTSSMPFKQMENITAFLKACRSVGVAEFDLFETVDLFELKKVDLVVKCIHALGRAVQKNVPEFDGPSLGAK 428
BLAST of mRNA_D-herbacea_F_contig1161.1204.1 vs. uniprot
Match: A0A6A3WDR1_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3WDR1_9STRA) HSP 1 Score: 185 bits (469), Expect = 2.270e-46 Identity = 145/458 (31.66%), Postives = 212/458 (46.29%), Query Frame = 1
Query: 64 KAQAWVEEVIGERLPKGDFAEAFKNGQGLCRLINTFRPGSISKIETSSS-PFKQMANISAFIQACRALGVHEQALFETLDLYNEKRLQQVVRCLFSLSEIVRTNMPDFPGPHLSTPE--KPDVDPAVKAVVDISKGRHPHSHGHSAAMPPFAPGWGSSTTAVNLDGTMADPAAAAGGPCTPRALHLALPKHVGKTGNGCCLSPGAHASGQLTYGIYEGGGVAASKCLAKDGSDGEGVGLVEPGTAEALAGQRKVDDKCGGAASEEGGRAGGAGEFGNSTVPVVSTPRHPLSVPIGVNTPGGSGLSAAPMPRSGTDREEELKRRKEAIAKHDAEMEVALWIEGVSGVTFPGRFWSSLKDGVLLCKMMNVIQPGLVPSINEAHAPFPEMENITAFLAACRKLGVAEHSLFDTKDLHEKRDVALVVRCLHVLGATVQSSVPDFKGPFLGKKTESWSRVNAR 1428
+A+AW+E I E DF E ++G LC + N P + ++ET S PFK M N+SAF++ACR +GV+E LFET+DL+ K L VVRC+F+L V+ N PDF GP L E K + D + G M + T+ + + M AA P + + + LS +A+ T+ G ++ S AK E V +E + D+K +S+ PV+++ ++A+ SG EEE + WIE V G F F SLKDGV+LC +MN IQPGL+P I + PF +MEN+++F+ ACR +GVAE LF+T DL ++++ VV+C+H LG T+Q ++P++ GP LG K S VN R
Sbjct: 35 EARAWLER-ISEMQIGDDFGEGLRDGVILCTVANKIHPSVVRRVETKSKMPFKLMENVSAFLKACRVMGVNEFDLFETVDLFELKDLGNVVRCVFALGRAVQRNYPDFKGPTLGVKESVKNQRSFTPDQLADGKNIISQQTLGSFRTMKRY--------TSYHTNNVMLGADAAQSAYRAPXXXXXXSKEKIEQ------LSRFRNANKLTTFNAQPEGELSPS---AKHVPTKEEVAATVAELSEEVEKTTVSDEKV----------------ASSSSTPVLNS------------------VAAS----SGPTTEEEAQE----------------WIEAVLGEKFLASFGDSLKDGVILCTLMNKIQPGLIPKIQSSSMPFKQMENVSSFVRACRAIGVAEFDLFETVDLFNQKNIGQVVQCIHALGRTIQKTMPEYDGPRLGVKE---STVNLR 417
BLAST of mRNA_D-herbacea_F_contig1161.1204.1 vs. uniprot
Match: A0A3F2RVG1_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RVG1_9STRA) HSP 1 Score: 178 bits (452), Expect = 2.420e-44 Identity = 146/458 (31.88%), Postives = 204/458 (44.54%), Query Frame = 1
Query: 64 KAQAWVEEVIGERLPKGDFAEAFKNGQGLCRLINTFRPGSISKIETSSS-PFKQMANISAFIQACRALGVHEQALFETLDLYNEKRLQQVVRCLFSLSEIVRTNMPDFPGPHLSTPEKPDVDPAVKAVVDISKGRHPHSHGHSAAMPPFAPGWGSSTTAVNLDGTMADPAAAAGGPCTPRALHLALPKHVGKTGNGCCLSPGAHASGQLTYGIYEGGGVAASKCLAKDGSDGEGVGLVEPGTAEALAGQRKVDDKCGGAASEEGGRAGGAGEFGNSTVPVVSTPRHPLSVPIGVNTPGGS--GLSAAPMPRSGTDREEELKRRKEAIAKHDAEMEVALWIEGVSGVTFPGRFWSSLKDGVLLCKMMNVIQPGLVPSINEAHAPFPEMENITAFLAACRKLGVAEHSLFDTKDLHEKRDVALVVRCLHVLGATVQSSVPDFKGPFLGKKTESWSRVNAR 1428
+A+AW+E + G + DF ++G LC + N P + ++ET S PFK M N+SAF++ACR +GV+E LFET+DL+ K L VVRC+F+L V+ + P+F GP L VK + + P + P A+ G+ R + H N L A SG +A K E L+ RK D + + G E S V +T L+ + T S GL++A T AE E WIE V F F SLKDGV+LC +MN ++PGL+P I + PF +MEN+T+FL ACR LGVAE LF+T DL+E++++ VV C+H LG T+Q +VP++ GP LG K S VN R
Sbjct: 35 EARAWLENLSGMEIGP-DFGPGLRDGVILCSVANKIHPDVVRRVETKSKMPFKLMENVSAFLKACRVMGVNEFDLFETVDLFELKDLGNVVRCIFALGRAVQRSYPEFKGPTLG----------VKESIKNQRAFTPDQLADARNAP-----------ALQTLGSF-------------RTMKRQTTFHT----NNVMLGADAAQSGYRAPXXXX--XXSAEKI-------------------EQLSRFRKADKLTTAESRQPEGELSPNEENVPSKEEVATTVAE-LADDLEKTTVSSSIPGLNSAAANSGPT-----------------AEEEAQTWIETVLDEKFLASFGDSLKDGVMLCALMNKVKPGLIPKIQNSTMPFKQMENVTSFLRACRTLGVAEFDLFETVDLYEQKNLGQVVHCIHALGRTLQKNVPEYDGPRLGVKE---STVNVR 411
BLAST of mRNA_D-herbacea_F_contig1161.1204.1 vs. uniprot
Match: A0A8K1CMC3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMC3_PYTOL) HSP 1 Score: 179 bits (455), Expect = 9.750e-44 Identity = 135/445 (30.34%), Postives = 187/445 (42.02%), Query Frame = 1
Query: 64 KAQAWVEEVIGERLPKGDFAEAFKNGQGLCRLINTFRPGSISKIETSSSPFKQMANISAFIQACRALGVHEQALFETLDLYNEKRLQQVVRCLFSLSEIVRTNMPDFPGPHLSTPEKPDVDPAVKAVVDISKGRHPHSHGHSAAMPPFAPGWGSSTTAVNLDGTMADPAAAAGGPCTPRALHLALPKHVGKTGNGCCLSPGAHASGQLTYGIYEGGGVAASKCLAKDGSDGEGVGLVEPGTAEALAGQRKVDDKCGGAASEEGGRAGGAGEFGNSTVPVVSTPRHPLSVPIGVNTPGGSGLSAAPMPRSGTDREEELKRRKEAIAKHDAEMEVALWIEGVSGVTFPGRFWSSLKDGVLLCKMMNVIQPGLVPSINEAHAPFPEMENITAFLAACRKLGVAEHSLFDTKDLHEKRDVALVVRCLHVLGATVQSSVPDFKGPFLGKK 1398
+AQ W+E V+GE+ + F E+ K+G LC L+NT +PG + K++ S+ PFKQM NI+AFI+ACR +GV E LFET+DL+ K + VV+CL +L ++ MP++ GP L VK + + T +D L +A AA LA+ G D ++E + A D TV VS R+ I+ E E LWIE V G F F SLKDGV LC ++N I+PG+V + PF +MENITAF+ ACR +GV E LF+T DL E ++V LVV+CLH LG T+Q ++P++ GP LG K
Sbjct: 299 EAQEWIEAVLGEKFTE-PFGESLKDGVKLCNLVNTIKPGIVPKVQVSTMPFKQMENITAFIKACRTIGVMEFDLFETVDLFELKNVDLVVKCLHALGRTIQKTMPEYTGPTLG----------VKESTENKR-------------------------------TFSD-----------AQLKVAA---------------------------------AAVPLLAEGGRD-----ILERRDSAQSASVASAADA--------------------PTVVHVSD-------------------------------------RRMTISAGSPEEEAQLWIEAVLGEKFTEPFGPSLKDGVKLCSLVNTIKPGIVAKVQVTTMPFKQMENITAFIKACRTIGVMEFDLFETVDLFELKNVDLVVKCLHALGRTIQKTMPEYTGPMLGVK 595
BLAST of mRNA_D-herbacea_F_contig1161.1204.1 vs. uniprot
Match: W2NFZ0_PHYPR (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2NFZ0_PHYPR) HSP 1 Score: 175 bits (444), Expect = 4.450e-43 Identity = 138/456 (30.26%), Postives = 206/456 (45.18%), Query Frame = 1
Query: 64 KAQAWVEEVIGERLPKGDFAEAFKNGQGLCRLINTFRPGSISKIETSSS-PFKQMANISAFIQACRALGVHEQALFETLDLYNEKRLQQVVRCLFSLSEIVRTNMPDFPGPHLSTPEKPDVDPAVKAVVDISKGRHPHSHGHSAAMPPFAPGWGSSTTAVNLDGTMADPAAAAGGPCTPRALHLALPKHVGKTGNGCCLSPGAHASGQLTYGIYEGGGVAASKCLAKDGSDGEGVGLVEPGTAEALAGQRKVDDKCGGAASEEGGRAGGAGEFGNSTVPVVSTPRHPLSVPIGVNTPGGSGLSAAPMPRSGTDREEELKRRKEAIAKHDAEMEVALWIEGVSGVTFPGRFWSSLKDGVLLCKMMNVIQPGLVPSINEAHAPFPEMENITAFLAACRKLGVAEHSLFDTKDLHEKRDVALVVRCLHVLGATVQSSVPDFKGPFLGKKTESWSRVNAR 1428
+A+ W+E I E DF E ++G LC N + ++ET S PFK M N+SAF++ACR +GV+E LFET+DL+ K L VVRC+F+L V+ N PDF GP L E + + ++ G++ + + S + V L A A A P + + + LS A T+ G ++ +K P AE A ++ D + +T+ + + PG + ++ + P AE E WIE V G F F SLKDGV+LC +MN I+PGL+P I + PF +MEN++AF+ ACR +GVAE LF+T DL+ ++++ VV+C+H LG T+Q ++P++ GP LG K S VN R
Sbjct: 35 EARVWLE-TISEMQIGDDFGEGLRDGVILCTTANKIHRDVVKRVETKSKMPFKLMENVSAFLKACRIMGVNEFDLFETVDLFELKDLGNVVRCIFALGRAVQRNYPDFTGPTLGVKESIKNQRSFTSD-QLAGGKNIPAQQTLGSFRTMKRQTTSYSNNVMLGADAAQSAYRA-----PXXXXXXSAEKIEQ------LSRFRKADQLTTFDSQPDGEISPTKHA--------------PTKAEVEAAVAELTD-----------------DVDKTTLDDTK---------VASSIPGLNSVTTSSGPT--------------------AEEEAQEWIEAVLGEKFLASFGDSLKDGVMLCSLMNKIKPGLIPRIQTSSMPFKQMENVSAFVRACRSIGVAEFDLFETVDLYNQKNLGQVVQCIHALGRTIQKTMPEYNGPLLGVKE---STVNPR 414
BLAST of mRNA_D-herbacea_F_contig1161.1204.1 vs. uniprot
Match: A0A0W8CZ75_PHYNI (Luc7 protein 3 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CZ75_PHYNI) HSP 1 Score: 174 bits (440), Expect = 6.640e-43 Identity = 141/456 (30.92%), Postives = 203/456 (44.52%), Query Frame = 1
Query: 64 KAQAWVEEVIGERLPKGDFAEAFKNGQGLCRLINTFRPGSISKIETSSS-PFKQMANISAFIQACRALGVHEQALFETLDLYNEKRLQQVVRCLFSLSEIVRTNMPDFPGPHLSTPEKPDVDPAVKAVVDISKGRHPHSHGHSAAMPPFAPGWGSSTTAVNLDGTMADPAAAAGGPCTPRALHLALPKHVGKTGNGCCLSPGAHASGQLTYGIYEGGGVAASKCLAKDGSDGEGVGLVEPGTAEALAGQRKVDDKCGGAASEEGGRAGGAGEFGNSTVPVVSTPRHPLSVPIGVNTPGGSGLSAAPMPRSGTDREEELKRRKEAIAKHDAEMEVALWIEGVSGVTFPGRFWSSLKDGVLLCKMMNVIQPGLVPSINEAHAPFPEMENITAFLAACRKLGVAEHSLFDTKDLHEKRDVALVVRCLHVLGATVQSSVPDFKGPFLGKKTESWSRVNAR 1428
+A+ W+E I E DF E ++G LC N + ++ET S PFK M N+SAF++ACR +GV+E LFET+DL+ K L VVRC+F+L V+ N PDF GP L E + + ++ G++ + + S + V L A A A P + + + LS A T+ G ++ +K VE AE DD V T V + PG + ++ + P AE E WIE V G F F SLKDGV+LC +MN I+PGL+P I + PF +MEN++AF+ ACR +GVAE LF+T DL+ ++++ VV+C+H LG T+Q ++P++ GP LG K S VN R
Sbjct: 35 EARVWLE-TISEMQIGDDFGEGLRDGVILCTTANKIHRDVVKRVETKSKMPFKLMENVSAFLKACRIMGVNEFDLFETVDLFELKDLGNVVRCIFALGRAVQRNYPDFTGPTLGVKESIKNQRSFTSD-QLAGGKNIPAQQTLGSFRTMKRQTTSYSNNVMLGADAAQSAYRA-----PXXXXXXSAEKIEQ------LSRFRKADQLTTFDSQPDGEISPTKHAPTKEE-------VEAAVAEL------TDD-------------------------VDKTTLDDTKVASSI--PGLNSVTTSSGPT--------------------AEEEAQEWIEAVLGEKFLASFGDSLKDGVMLCSLMNKIKPGLIPRIQTSSMPFKQMENVSAFVRACRSIGVAEFDLFETVDLYNQKNLGQVVQCIHALGRTIQKTMPEYNGPLLGVKE---STVNPR 414 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1161.1204.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig1161.1204.1 >prot_D-herbacea_F_contig1161.1204.1 ID=prot_D-herbacea_F_contig1161.1204.1|Name=mRNA_D-herbacea_F_contig1161.1204.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=811bp MLLPSPTTPSARFARDVMAGAKAQAWVEEVIGERLPKGDFAEAFKNGQGLback to top mRNA from alignment at D-herbacea_F_contig1161:4727..18524+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig1161.1204.1 ID=mRNA_D-herbacea_F_contig1161.1204.1|Name=mRNA_D-herbacea_F_contig1161.1204.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=13798bp|location=Sequence derived from alignment at D-herbacea_F_contig1161:4727..18524+ (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig1161:4727..18524+ >mRNA_D-herbacea_F_contig1161.1204.1 ID=mRNA_D-herbacea_F_contig1161.1204.1|Name=mRNA_D-herbacea_F_contig1161.1204.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=4866bp|location=Sequence derived from alignment at D-herbacea_F_contig1161:4727..18524+ (Desmarestia herbacea DmunF female)back to top |