mRNA_D-herbacea_F_contig116.1178.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig116.1178.1 vs. uniprot
Match: D8LT33_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT33_ECTSI) HSP 1 Score: 388 bits (997), Expect = 2.690e-133 Identity = 199/270 (73.70%), Postives = 221/270 (81.85%), Query Frame = 1
Query: 19 RHPAIDFAVAGSATSCACVLSNPMEVVKTRMQLQGELVLKTT-----TERGYKPPYRNVMHAFYKICRDEGLRGIQAGLLPGLMYQVLMNGTRLSLFSPIQKALGADRDANSGTAFFFRNLAAGAACGAAGAVVGSPLFLIKARLQSQSTAHSLRTPGAGEFRCCFFFGLLGLTRAMDASVMRVMVGSAAQLASYSSCKAAVLRTGLFEDNIYAYLASSMVAGLVVTTAMNPFDVISTRLYAQGGAVTERYKGPFDCAAKTVRAEGLRGV 813
RHP +DF +AGSATSCA VLSNPM+VVKTRMQLQ ELVL+ T + Y+ PY+N +HAFYKICRDEG+RGIQAGLLPGLMYQ+LMNGTRLSLF+P+QKALG D + FFFRNLAAGAACGAAGA++GSP+FL+KARLQSQS AHSLRT G GEFR GL GLTR ASVMRVMVGSA QL+ YSSCKAAVL TGLFEDN+YAYL+SS+ AGLVVTT MNP DV+STRLYAQG V ERY GP DCA KTV AEG RGV
Sbjct: 55 RHPVVDFLLAGSATSCASVLSNPMDVVKTRMQLQSELVLRKAGQSQQTTQVYRAPYKNALHAFYKICRDEGVRGIQAGLLPGLMYQILMNGTRLSLFAPVQKALGVDAENKGKIGFFFRNLAAGAACGAAGALIGSPVFLVKARLQSQSKAHSLRTAGGGEFR-----GLRGLTRGTSASVMRVMVGSATQLSVYSSCKAAVLGTGLFEDNVYAYLSSSLAAGLVVTTTMNPLDVVSTRLYAQGTGVAERYTGPLDCAVKTVSAEGFRGV 319
BLAST of mRNA_D-herbacea_F_contig116.1178.1 vs. uniprot
Match: A0A6H5L6Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Z3_9PHAE) HSP 1 Score: 331 bits (848), Expect = 8.910e-111 Identity = 179/278 (64.39%), Postives = 201/278 (72.30%), Query Frame = 1
Query: 88 MEVVKTRMQLQGELVLKTTTE-----RGYKPPYRNVMHAFYKICRDEGLRGIQAGLLPGLMYQVLMNGTRLSLFSPIQKALGADRDANSGTAFFFRNLAAGAACGAAGAVVGSPLFLIKARLQSQSTAHSLRTPGAGEFR-----------------CCFFF--------------GLLGLTRAMDASVMRVMVGSAAQLASYSSCKAAVLRTGLFEDNIYAYLASSMVAGLVVTTAMNPFDVISTRLYAQGGAVTERYKGPFDCAAKTVRAEGLRGV 813
M+VVKTRMQLQ ELVL+ + + Y+ PY+N +HAFYKICRDEG+RGIQAGLLPG+MYQ+LMNGTRLSLF+P+QK LG D + FFFRNLAAGAACGAAGA++ SP+FL+KARLQSQS AHSLRT G GEFR C + GL GLTR ASVMRVMVGSA QL+ YSSCKAAVL TGLFEDN+YAYLASS VAGLVVTT MNP DV+STRLYAQG V ERY GP DCA KTV AEG RG+
Sbjct: 1 MDVVKTRMQLQSELVLRKAGQSRQMTQVYRAPYKNALHAFYKICRDEGVRGIQAGLLPGIMYQILMNGTRLSLFAPVQKVLGVDVENKGKIGFFFRNLAAGAACGAAGALIASPVFLVKARLQSQSKAHSLRTAGGGEFRWVRGAVSAALQGCRCSPICNRYRGTWHAFTDIVQKEGLRGLTRGTSASVMRVMVGSATQLSVYSSCKAAVLGTGLFEDNVYAYLASSSVAGLVVTTTMNPLDVVSTRLYAQGTGVAERYTGPLDCAVKTVSAEGFRGL 278
BLAST of mRNA_D-herbacea_F_contig116.1178.1 vs. uniprot
Match: A0A835YMV3_9STRA (Solute carrier family 25 member 34 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMV3_9STRA) HSP 1 Score: 264 bits (674), Expect = 7.520e-85 Identity = 150/251 (59.76%), Postives = 173/251 (68.92%), Query Frame = 1
Query: 88 MEVVKTRMQLQGELVLKTTTERGYKPPYRNVMHAFYKICRDEGLRGIQAGLLPGLMYQVLMNGTRLSLFSPIQKALGADRDANSGTAFFFRNLAAGAACGAAGAVVGSPLFLIKARLQSQSTAHSLRTPGAGEFRCCFFF----------GLLGLTRAMDASVMRVMVGSAAQLASYSSCKAAVLRTGLFEDNIYAYLASSMVAGLVVTTAMNPFDVISTRLYAQGGAVTERYKGPFDCAAKTVRAEGLRG 810
MEVVKTR QLQGEL K++ R YK +V AFYKI RDEGLRGIQAGLLPG++YQ MNGTRL +F+P+Q+ L AD + +FFF+NLAAGA GA GA VGSP FL+KARLQ QS+ H +R+ GA F G GL R MDA+V RVM GSAAQL+SYSSCK V TG F +Y Y+ASS+VAGLVVTT MNPFDV+STRLY+Q A Y GP DC KT RAEGLRG
Sbjct: 1 MEVVKTRFQLQGELA-KSSPNRIYK----HVFDAFYKIARDEGLRGIQAGLLPGILYQSTMNGTRLGMFAPLQRFLKADAKTDGQVSFFFKNLAAGAISGACGAAVGSPFFLVKARLQGQSSVHKIRSAGAEVFHYRGMTDAFRSIIADEGWRGLARGMDAAVPRVMAGSAAQLSSYSSCKRLVQSTGFFHSELYTYIASSLVAGLVVTTVMNPFDVVSTRLYSQS-AKHLVYTGPIDCFKKTFRAEGLRG 245
BLAST of mRNA_D-herbacea_F_contig116.1178.1 vs. uniprot
Match: A0A484E3G6_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E3G6_BRELC) HSP 1 Score: 235 bits (599), Expect = 3.850e-73 Identity = 136/270 (50.37%), Postives = 172/270 (63.70%), Query Frame = 1
Query: 31 IDFAVAGSATSCACVLSNPMEVVKTRMQLQGELVLKTTTERGYKPPYRNVMHAFYKICRDEGLRGIQAGLLPGLMYQVLMNGTRLSLFSPIQKALGADRDANSGTAFFF--RNLAAGAACGAAGAVVGSPLFLIKARLQSQSTAHSLRTPGAGEFRCCFFF------GLLGLTRAMDASVMRVMVGSAAQLASYSSCKAAVLRTGLFEDNIYAYLASSMVAGLVVTTAMNPFDVISTRLYAQG--GAVTERYKGPFDCAAKTVRAEGLRG 810
+DF +AG ATS ACV+SNPMEV+KTRMQLQGEL T+ YRN HAFY ICR EGLRGIQ GLLPG+ YQ+ MNG RL LF+P+QK +GA T+ +F RN+ A A G GA +GSP +L+KAR+Q+ STA + A + F G+ GL R A+V RV +GS QLA+Y+ K VL G FED I +L +S + GLVVTTAMNP DV+STR+Y+Q + Y G DC KT+++EG+RG
Sbjct: 8 MDFMLAGLATSGACVVSNPMEVIKTRMQLQGELAHNVTSGSVPVVRYRNFAHAFYTICRTEGLRGIQRGLLPGISYQIFMNGPRLGLFAPLQKVVGA----TDPTSVWFPVRNVCAAATSGMIGACIGSPFYLVKARIQAASTAGKINAQYAYDGMIDGFRQILNTDGVAGLYRGATAAVPRVAIGSGTQLATYTQAKTVVLAAG-FEDGIQVHLGASTLTGLVVTTAMNPMDVVSTRMYSQKVVNGKGKLYSGLLDCIEKTMKSEGIRG 272
BLAST of mRNA_D-herbacea_F_contig116.1178.1 vs. uniprot
Match: K3WA37_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WA37_GLOUD) HSP 1 Score: 234 bits (597), Expect = 1.180e-72 Identity = 144/275 (52.36%), Postives = 172/275 (62.55%), Query Frame = 1
Query: 16 RRHPAIDFAVAGSATSCACVLSNPMEVVKTRMQLQGELVLKTTTERGYKPP--YRNVMHAFYKICRDEGLRGIQAGLLPGLMYQVLMNGTRLSLFSPIQKALGADRDANSGTAFFFRNLAAGAACGAAGAVVGSPLFLIKARLQSQSTAHSLRTPGAGEFRCCFFFGLL------GLTRAMDASVMRVMVGSAAQLASYSSCKAAVLRTGLFEDNIYAYLASSMVAGLVVTTAMNPFDVISTRLYAQG--GAVTERYKGPFDCAAKTVRAEGLRG 810
+R A+DF +AG ATS ACV+SNPMEVVKTRMQLQGEL KT P YRN H F+ ICR EGL GIQ GLLPG+ YQ +N RL LF PIQK GA + +F RNLAA A G GA VGSP FL+KAR+Q+ S+A ++ A F +L GL R M +V RV +GS QLA+Y+ K V+ G+ ED L SS+V+GLVVTTAMNPFDV+STRLY+Q E Y G FDC +KT RAEG+RG
Sbjct: 16 KRGFAMDFFLAGIATSGACVVSNPMEVVKTRMQLQGELA-KTAVAGNAVPTVRYRNFAHGFFTICRTEGLVGIQRGLLPGMAYQTFLNAPRLGLFEPIQKLYGATDPTHF--SFPIRNLAAAATSGLIGACVGSPFFLVKARIQAASSAATINAQYAYTGMVDGFRQILRTEGPRGLYRGMSGAVPRVSIGSGTQLATYTQAKTLVMAAGI-EDGFQVQLGSSIVSGLVVTTAMNPFDVVSTRLYSQKVVNGKGELYNGVFDCLSKTWRAEGIRG 286
BLAST of mRNA_D-herbacea_F_contig116.1178.1 vs. uniprot
Match: A0A485KSQ5_9STRA (Aste57867_11310 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KSQ5_9STRA) HSP 1 Score: 233 bits (595), Expect = 1.800e-72 Identity = 141/279 (50.54%), Postives = 180/279 (64.52%), Query Frame = 1
Query: 7 PQRRRHPAIDFAVAGSATSCACVLSNPMEVVKTRMQLQGELVLKTTTERGYKPPYRNVMHAFYKICRDEGLRGIQAGLLPGLMYQVLMNGTRLSLFSPIQKALGADRDANSGTAFFFRNLAAGAACGAAGAVVGSPLFLIKARLQSQSTAHSLRTPG--AGEF----RCCFFFGLLGLTRAMDASVMRVMVGSAAQLASYSSCKAAVLRTGLFEDNIYAYLASSMVAGLVVTTAMNPFDVISTRLYAQ----GGAVTERYKGPFDCAAKTVRAEGLRGV 813
P R +F +AG+ATS A + SNPMEVVKTRMQLQGEL K G YRN HAF+ ICR EG+ GIQ GL+ G+ YQ LMNG+RL F +Q+ GA D N ++ FRN+ AGA G+ GA++GSP FL+KARLQ+QS A S+ G F + G++GL R ++ ++ RV VGSAAQL++Y+S K VL TGL ED ++ +LA+S+V GL VTTAMNPFDV+STRLY+Q G V Y G DC KT EG+RG+
Sbjct: 9 PAPERGLFANFVIAGAATSLATIGSNPMEVVKTRMQLQGELAAK-----GAPIVYRNSFHAFFTICRLEGVAGIQRGLVAGMCYQTLMNGSRLGFFEQLQQVYGAT-DPNH-ISYPFRNMLAGATSGSIGAMMGSPFFLVKARLQAQSNAASINAQYHYKGTFDAFRQIIAKDGVMGLYRGVNGAIPRVAVGSAAQLSTYASSKHIVLSTGLLEDGVWCHLAASLVTGLAVTTAMNPFDVVSTRLYSQKVVDGKGVL--YSGVLDCFKKTFGVEGVRGL 278
BLAST of mRNA_D-herbacea_F_contig116.1178.1 vs. uniprot
Match: A0A5D6Y7N2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y7N2_9STRA) HSP 1 Score: 232 bits (592), Expect = 5.260e-72 Identity = 142/279 (50.90%), Postives = 171/279 (61.29%), Query Frame = 1
Query: 4 QPQRRRHPAIDFAVAGSATSCACVLSNPMEVVKTRMQLQGELVLKTTTERGYKPP--YRNVMHAFYKICRDEGLRGIQAGLLPGLMYQVLMNGTRLSLFSPIQKALGADRDANSGTAFFFRNLAAGAACGAAGAVVGSPLFLIKARLQSQSTAHSLRTPGA------GEFRCCFFFGLLGLTRAMDASVMRVMVGSAAQLASYSSCKAAVLRTGLFEDNIYAYLASSMVAGLVVTTAMNPFDVISTRLYAQG--GAVTERYKGPFDCAAKTVRAEGLRG 810
Q +R A+DF +AG AT ACV+SNPMEVVKTRMQLQGEL KT P YRN H FY I R EGL G+Q GLLPG+ YQ +NG RL LF PIQK GA + F RNLAA A G GA +GSP FL+KAR+Q+ S++ ++ A G G+ GL R M ++ RV +GS QLA+Y+ K V G+ ED +L SS+V+GLVVTTAMNPFDV+STRLY+Q E Y G FDC AKT RAEG+RG
Sbjct: 4 QTTYKRGFAMDFFLAGVATGGACVVSNPMEVVKTRMQLQGELA-KTAVAGSAVPSVRYRNFAHGFYTISRTEGLVGLQRGLLPGMAYQCFLNGPRLGLFEPIQKLYGATDPTHF--TFPLRNLAAAATSGLIGACIGSPFFLVKARIQAASSSATINAQYAYNGMLDGFRHILRTEGVKGLYRGMSGAIPRVSIGSGTQLATYTQAKTLVAAAGI-EDGFQVHLGSSIVSGLVVTTAMNPFDVVSTRLYSQKVVNGKGELYTGVFDCLAKTFRAEGIRG 278
BLAST of mRNA_D-herbacea_F_contig116.1178.1 vs. uniprot
Match: W2H888_PHYPR (Uncharacterized protein n=18 Tax=Phytophthora TaxID=4783 RepID=W2H888_PHYPR) HSP 1 Score: 231 bits (590), Expect = 8.770e-72 Identity = 139/276 (50.36%), Postives = 173/276 (62.68%), Query Frame = 1
Query: 19 RHPAIDFAVAGSATSCACVLSNPMEVVKTRMQLQGELVLKTTTERGYKP--PYRNVMHAFYKICRDEGLRGIQAGLLPGLMYQVLMNGTRLSLFSPIQKALGADRDANSGTAFFF--RNLAAGAACGAAGAVVGSPLFLIKARLQSQSTAHSLRTPGA------GEFRCCFFFGLLGLTRAMDASVMRVMVGSAAQLASYSSCKAAVLRTGLFEDNIYAYLASSMVAGLVVTTAMNPFDVISTRLYAQG--GAVTERYKGPFDCAAKTVRAEGLRG 810
R +DF +A ATS AC++SNPMEVVKTRMQLQGEL T RG P YRN +HAFY I R EG+RGIQ GL PG+ YQ+ MNG RL LF P+QK GA TA+ F RN+ A A G GA +GSP FL+KAR+Q+ S+A + A G + GLLGL R AS+ RV +GS QLA+Y+ K VL G FED + +L SS++ GLVVTTAMNP DV+STR+Y+Q + Y G DC KT+++EG+RG
Sbjct: 4 RSIVMDFLLASVATSGACIVSNPMEVVKTRMQLQGELAHNVT--RGAAPVVQYRNFVHAFYTIGRTEGIRGIQRGLGPGISYQIFMNGPRLGLFEPLQKVFGA----TDPTAYSFPLRNVCAAATSGMIGAFIGSPFFLVKARIQAASSAGKINAQYAYNGMMDGFRQIIRSDGLLGLYRGATASIPRVAIGSGTQLATYTQAKTLVLAAG-FEDGVQVHLGSSILTGLVVTTAMNPMDVVSTRIYSQKVVNGKGKLYSGVMDCIMKTMKSEGVRG 272
BLAST of mRNA_D-herbacea_F_contig116.1178.1 vs. uniprot
Match: A0A6A5AIL5_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AIL5_9STRA) HSP 1 Score: 231 bits (589), Expect = 2.710e-71 Identity = 144/272 (52.94%), Postives = 175/272 (64.34%), Query Frame = 1
Query: 34 DFAVAGSATSCACVLSNPMEVVKTRMQLQGELVLKTTTERGYKPPYRNVMHAFYKICRDEGLRGIQAGLLPGLMYQVLMNGTRLSLFSPIQKALGADRDANSGTAFFFRNLAAGAACGAAGAVVGSPLFLIKARLQSQSTA--------HSLRTPGAGEFRCCFFFGLLGLTRAMDASVMRVMVGSAAQLASYSSCKAAVLRTGLFEDNIYAYLASSMVAGLVVTTAMNPFDVISTRLYAQ----GGAVTERYKGPFDCAAKTVRAEGLRGV 813
+F +A +ATS A + SNPMEVVKTRMQLQGEL RG YRN HAFY ICR EG+ GIQ GL+ G+ YQ MNG RL F +Q+ GA D N +F RN+AAGA GA GA++GSP FL+KARLQ+QS+A H T A + G+LGL R ++ +V RV VGSAAQL++Y+S K VL TGL ED I +LA+S+V GL VTTAMNPFDV+STRLY+Q G V Y G DC KT AEG+RG+
Sbjct: 38 NFVIAAAATSLATIGSNPMEVVKTRMQLQGELAA-----RGAPIVYRNSFHAFYTICRLEGIAGIQRGLVAGMFYQSFMNGARLGFFEQLQQVYGAT-DPNH-YSFPLRNMAAGATSGALGAIMGSPFFLVKARLQAQSSAVSAINAQYHYKGTLDAIR-QIIAKDGVLGLYRGVNGAVPRVAVGSAAQLSTYASSKHLVLSTGLLEDGILCHLAASLVTGLAVTTAMNPFDVVSTRLYSQKVVNGQGVL--YSGVIDCFKKTFGAEGVRGL 299
BLAST of mRNA_D-herbacea_F_contig116.1178.1 vs. uniprot
Match: A0A6G0XPW9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPW9_9STRA) HSP 1 Score: 230 bits (586), Expect = 3.740e-71 Identity = 138/279 (49.46%), Postives = 173/279 (62.01%), Query Frame = 1
Query: 7 PQRRRHPAIDFAVAGSATSCACVLSNPMEVVKTRMQLQGELVLKTTTERGYKPPYRNVMHAFYKICRDEGLRGIQAGLLPGLMYQVLMNGTRLSLFSPIQKALGADRDANSGTAFFFRNLAAGAACGAAGAVVGSPLFLIKARLQSQSTAHSLRTPG--AGEFRCCFFF----GLLGLTRAMDASVMRVMVGSAAQLASYSSCKAAVLRTGLFEDNIYAYLASSMVAGLVVTTAMNPFDVISTRLYAQ----GGAVTERYKGPFDCAAKTVRAEGLRGV 813
P + R +F +A +ATS A V SNPMEVVKTRMQLQGEL K G YRN HAFY ICR EG+ GIQ GL G+ YQ MNG RL LF +Q+ GA + ++ RN+ AGA GA GA++GSP FL+KARLQ+QS A ++ G F G +GL R ++ +V RV +GSAAQ+++Y+S K VL TGL ED + + ASS+V G+ VTTAMNPFDV+STRLY+Q G V Y G DC KT AEG+RG+
Sbjct: 6 PPKERGLVANFIIAAAATSLATVGSNPMEVVKTRMQLQGELAAK-----GAPIVYRNSFHAFYTICRLEGIAGIQRGLTAGMFYQTFMNGARLGLFEHLQRVYGATDPTSY--SYPLRNMLAGATSGAIGAIMGSPFFLVKARLQAQSNASTINAQYNYRGTFDALRQIVAKDGFVGLYRGVNGAVPRVAIGSAAQMSTYASSKHLVLSTGLLEDGVLCHFASSLVTGVAVTTAMNPFDVVSTRLYSQKVVDGKGVL--YSGVIDCFRKTFGAEGVRGL 275 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig116.1178.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig116.1178.1 >prot_D-herbacea_F_contig116.1178.1 ID=prot_D-herbacea_F_contig116.1178.1|Name=mRNA_D-herbacea_F_contig116.1178.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=271bp MQPQRRRHPAIDFAVAGSATSCACVLSNPMEVVKTRMQLQGELVLKTTTEback to top mRNA from alignment at D-herbacea_F_contig116:407744..418105- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig116.1178.1 ID=mRNA_D-herbacea_F_contig116.1178.1|Name=mRNA_D-herbacea_F_contig116.1178.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=10362bp|location=Sequence derived from alignment at D-herbacea_F_contig116:407744..418105- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig116:407744..418105- >mRNA_D-herbacea_F_contig116.1178.1 ID=mRNA_D-herbacea_F_contig116.1178.1|Name=mRNA_D-herbacea_F_contig116.1178.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1626bp|location=Sequence derived from alignment at D-herbacea_F_contig116:407744..418105- (Desmarestia herbacea DmunF female)back to top |