mRNA_D-herbacea_F_contig116.1167.1 (mRNA) Desmarestia herbacea DmunF female
|
Overview
Homology
BLAST of mRNA_D-herbacea_F_contig116.1167.1 vs. uniprot
Match: A0A7S3XZ48_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZ48_HETAK) HSP 1 Score: 156 bits (394), Expect = 3.520e-47 Identity = 69/102 (67.65%), Postives = 86/102 (84.31%), Query Frame = 1
Query: 4 VEDIFSYARHNRVDGLERMMDQGVPVDVRDSHGNTILIVACQNGHKRALKAALRRGADPNATNAIGNTALHFCYAFGYGDTLGRYLMDKGADSSMRNRSGLV 309
+ED+FSYARHNRVD LER++D G+PV++RD +GNT+L VACQNGHKRA KAALRRGAD NA N GNT LHFC+ +GYG+TLG+YL+ KGAD ++RN G+
Sbjct: 16 LEDVFSYARHNRVDDLERLLDAGMPVNIRDQYGNTVLCVACQNGHKRAAKAALRRGADINARNYRGNTPLHFCFTYGYGETLGQYLISKGADPTIRNNDGVT 117
BLAST of mRNA_D-herbacea_F_contig116.1167.1 vs. uniprot
Match: A0A7S2MBB0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MBB0_9STRA) HSP 1 Score: 152 bits (383), Expect = 3.680e-44 Identity = 68/102 (66.67%), Postives = 85/102 (83.33%), Query Frame = 1
Query: 4 VEDIFSYARHNRVDGLERMMDQGVPVDVRDSHGNTILIVACQNGHKRALKAALRRGADPNATNAIGNTALHFCYAFGYGDTLGRYLMDKGADSSMRNRSGLV 309
VEDIFSYARHNR + +ER++DQG+PV++RD GNTIL ++CQNG+KR KAALRRGA+ NA N GNT LHFCY +GYGDTLG+YL+ KG D+S+ NR+GL
Sbjct: 120 VEDIFSYARHNRFEDIERLLDQGIPVNIRDKTGNTILAISCQNGNKRVAKAALRRGANINAQNYRGNTPLHFCYTYGYGDTLGQYLISKGGDTSILNRAGLT 221
BLAST of mRNA_D-herbacea_F_contig116.1167.1 vs. uniprot
Match: D8LT35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT35_ECTSI) HSP 1 Score: 145 bits (365), Expect = 3.620e-41 Identity = 68/78 (87.18%), Postives = 73/78 (93.59%), Query Frame = 1
Query: 1 MVEDIFSYARHNRVDGLERMMDQGVPVDVRDSHGNTILIVACQNGHKRALKAALRRGADPNATNAIGNTALHFCYAFG 234
+VED+FSYARHNRV LERMMDQGVP DVRDSHGNTILIVACQNGHKRALKAALR GADP+A+NA GNTALH+CYAFG
Sbjct: 172 IVEDVFSYARHNRVLDLERMMDQGVPADVRDSHGNTILIVACQNGHKRALKAALRHGADPDASNARGNTALHYCYAFG 249
BLAST of mRNA_D-herbacea_F_contig116.1167.1 vs. uniprot
Match: A0A7S1TRF9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRF9_9STRA) HSP 1 Score: 144 bits (362), Expect = 6.480e-41 Identity = 65/91 (71.43%), Postives = 80/91 (87.91%), Query Frame = 1
Query: 4 VEDIFSYARHNRVDGLERMMDQGVPVDVRDSHGNTILIVACQNGHKRALKAALRRGADPNATNAIGNTALHFCYAFGYGDTLGRYLMDKGA 276
VEDIFSYARHNRV+ +E ++D+GVPV+VRD +GNT+LIV+CQNGHKRA K ALR+GAD NA N GN+ALHFC+ +GYGDTLG+YL+ KGA
Sbjct: 143 VEDIFSYARHNRVEDMEAVLDRGVPVNVRDQYGNTLLIVSCQNGHKRAAKMALRKGADINARNYKGNSALHFCHTYGYGDTLGQYLISKGA 233
BLAST of mRNA_D-herbacea_F_contig116.1167.1 vs. uniprot
Match: A0A7S3HME0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HME0_9STRA) HSP 1 Score: 143 bits (361), Expect = 3.060e-40 Identity = 64/100 (64.00%), Postives = 81/100 (81.00%), Query Frame = 1
Query: 4 VEDIFSYARHNRVDGLERMMDQGVPVDVRDSHGNTILIVACQNGHKRALKAALRRGADPNATNAIGNTALHFCYAFGYGDTLGRYLMDKGADSSMRNRSG 303
VED+FSYARH R + +ER+ +G+PVDVR+ HGNT+LIVACQNG+KR KA LRRGA+ NA N GNT LH+CY +GYGD+LG+YL+ KGAD+ RN +G
Sbjct: 173 VEDVFSYARHGRCEEIERLFAKGLPVDVRNDHGNTVLIVACQNGNKRVAKAVLRRGANINARNLRGNTPLHYCYHYGYGDSLGQYLISKGADADARNNAG 272
BLAST of mRNA_D-herbacea_F_contig116.1167.1 vs. uniprot
Match: A0A5A8E191_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E191_CAFRO) HSP 1 Score: 142 bits (357), Expect = 2.290e-39 Identity = 66/102 (64.71%), Postives = 81/102 (79.41%), Query Frame = 1
Query: 4 VEDIFSYARHNRVDGLERMMDQGVPVDVRDSHGNTILIVACQNGHKRALKAALRRGADPNATNAIGNTALHFCYAFGYGDTLGRYLMDKGADSSMRNRSGLV 309
V+D+FS ARHNRV L ++D+GVPVD+ D+HGNTILIVACQNG KR K ALRRG D +A N+ GNTALHFCYA+GYG+ LG YL+ KGAD + RN +G +
Sbjct: 198 VKDVFSLARHNRVADLTALLDRGVPVDIADAHGNTILIVACQNGLKRVAKLALRRGCDIDARNSRGNTALHFCYAYGYGEGLGAYLVSKGADPAARNDAGFL 299
BLAST of mRNA_D-herbacea_F_contig116.1167.1 vs. uniprot
Match: A0A2D4BHZ8_PYTIN (Proteasome subunit alpha, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BHZ8_PYTIN) HSP 1 Score: 140 bits (354), Expect = 7.620e-38 Identity = 65/100 (65.00%), Postives = 81/100 (81.00%), Query Frame = 1
Query: 10 DIFSYARHNRVDGLERMMDQGVPVDVRDSHGNTILIVACQNGHKRALKAALRRGADPNATNAIGNTALHFCYAFGYGDTLGRYLMDKGADSSMRNRSGLV 309
D+FS ARHNRVD + M+DQGV V+ RD+HGNTIL +ACQNG KR K ALRRGA+ N+ N GNTALHFC+A+GYGDTLG YL+ KGAD+++ N +GL+
Sbjct: 318 DVFSAARHNRVDSVAYMLDQGVSVNARDAHGNTILSIACQNGLKRMAKLALRRGANINSQNNRGNTALHFCFAYGYGDTLGEYLLSKGADATIANDAGLL 417
BLAST of mRNA_D-herbacea_F_contig116.1167.1 vs. uniprot
Match: A0A7S1C915_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C915_9STRA) HSP 1 Score: 132 bits (333), Expect = 1.070e-37 Identity = 59/102 (57.84%), Postives = 77/102 (75.49%), Query Frame = 1
Query: 4 VEDIFSYARHNRVDGLERMMDQGVPVDVRDSHGNTILIVACQNGHKRALKAALRRGADPNATNAIGNTALHFCYAFGYGDTLGRYLMDKGADSSMRNRSGLV 309
V D+FS ARHNR +E ++D+GVPV++RD HGNTIL +ACQNG K+ K ALR GAD N N GNT LH+C+ +G+GDTLG+Y++ KGAD ++RN GL
Sbjct: 27 VADVFSLARHNRCKEVEALLDRGVPVNLRDKHGNTILTIACQNGLKKMAKVALRAGADINTRNYKGNTPLHYCFTYGWGDTLGQYMLSKGADGTLRNDLGLT 128
BLAST of mRNA_D-herbacea_F_contig116.1167.1 vs. uniprot
Match: F0XZK4_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZK4_AURAN) HSP 1 Score: 130 bits (326), Expect = 3.620e-37 Identity = 61/97 (62.89%), Postives = 79/97 (81.44%), Query Frame = 1
Query: 4 VEDIFSYARHNRVDGLERMMDQGVPVDVRDSHGNTILIVACQNGHKRALKAALRRGADPNATNAIGNTALHFCYAFGYGDTLGRYLMDKGADSSMRN 294
V++IFS+ARHNRVD +ER++ +GVP +VRD +GNT+ +VA QNGHKR +K ALRRGAD NA N GNTALHFC++FG+ D LG Y++ KGAD +RN
Sbjct: 2 VDNIFSFARHNRVDDVERLLLRGVPPNVRDVYGNTVTLVAAQNGHKRIVKGALRRGADINAANYRGNTALHFCFSFGF-DKLGDYMISKGADPGIRN 97
BLAST of mRNA_D-herbacea_F_contig116.1167.1 vs. uniprot
Match: G4Z035_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4Z035_PHYSP) HSP 1 Score: 133 bits (335), Expect = 4.610e-37 Identity = 62/100 (62.00%), Postives = 78/100 (78.00%), Query Frame = 1
Query: 10 DIFSYARHNRVDGLERMMDQGVPVDVRDSHGNTILIVACQNGHKRALKAALRRGADPNATNAIGNTALHFCYAFGYGDTLGRYLMDKGADSSMRNRSGLV 309
D+FS ARHNR D + M+DQGVPV+ RD GNT+L +ACQNG KR K ALRRGA+ N+ N GNTALHFC+++GYGD+LG YL+ KGAD+++ N GLV
Sbjct: 103 DLFSAARHNRYDSVVYMLDQGVPVNSRDQFGNTLLSIACQNGLKRIAKLALRRGANINSQNNRGNTALHFCFSYGYGDSLGAYLISKGADTTIENDDGLV 202 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig116.1167.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig116.1167.1 >prot_D-herbacea_F_contig116.1167.1 ID=prot_D-herbacea_F_contig116.1167.1|Name=mRNA_D-herbacea_F_contig116.1167.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=109bp MVEDIFSYARHNRVDGLERMMDQGVPVDVRDSHGNTILIVACQNGHKRALback to top mRNA from alignment at D-herbacea_F_contig116:248045..249564+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig116.1167.1 ID=mRNA_D-herbacea_F_contig116.1167.1|Name=mRNA_D-herbacea_F_contig116.1167.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=1520bp|location=Sequence derived from alignment at D-herbacea_F_contig116:248045..249564+ (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig116:248045..249564+ >mRNA_D-herbacea_F_contig116.1167.1 ID=mRNA_D-herbacea_F_contig116.1167.1|Name=mRNA_D-herbacea_F_contig116.1167.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=654bp|location=Sequence derived from alignment at D-herbacea_F_contig116:248045..249564+ (Desmarestia herbacea DmunF female)back to top |