mRNA_D-herbacea_F_contig1152.1135.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig1152.1135.1 vs. uniprot
Match: A0A2D9I2B1_9PROT (Multidrug DMT transporter permease n=3 Tax=Rhodospirillales TaxID=204441 RepID=A0A2D9I2B1_9PROT) HSP 1 Score: 532 bits (1370), Expect = 3.820e-190 Identity = 276/292 (94.52%), Postives = 287/292 (98.29%), Query Frame = 1
Query: 1 MKPFDLAIVLFVVTIWGLNFVFVKIGVAEIPPFLFMALRFGVVAAILLPFIKWPHGRGKALLAYSLILGVLHFGLMFNAIHLIDASTVALLSQLNTPFAVILSAVLFRDYPGWKRVLGIAIAFGGCFVIAGEPRFDGALLPILMVVGGTFAWAVAAVQAKQLGAIGPFALNGWMALFATPPLLLISLMTETGQLDALRGISMNAVISVLYQSVLVVIVGYGLWYGLIKRYPLSRVIPFTLLMPVVGVAGGVLALGEAMTIEMVIGGGLIIVGVGIVALRQAARGETSPVRPH 876
MKPFDLAIVLFVVTIWGLNFVFVKIGVAEIPPFLFMALRFGVVA IL+PFIKWPHGRGKAL+AYS++LGV+HFGLMFNAIHLIDASTVALLSQLNTPFAVILSAVLFRDYPGWKRVLGIAIAFGGCFVIAGEPRFDGALLPILMVVGGTFAWAVAAVQAKQLG+IGPFALNGWMALFATPPLLLISL TETGQ DA+R IS+NAVISVLYQSVLVVIVGYGLWYGLIKRYPLSRVIPFTLL+PVVGVAGGVLALGEAMT+EMVIGGGLIIVGVGIVALRQAARGE +PVRPH
Sbjct: 1 MKPFDLAIVLFVVTIWGLNFVFVKIGVAEIPPFLFMALRFGVVALILVPFIKWPHGRGKALIAYSMMLGVIHFGLMFNAIHLIDASTVALLSQLNTPFAVILSAVLFRDYPGWKRVLGIAIAFGGCFVIAGEPRFDGALLPILMVVGGTFAWAVAAVQAKQLGSIGPFALNGWMALFATPPLLLISLATETGQWDAMRMISVNAVISVLYQSVLVVIVGYGLWYGLIKRYPLSRVIPFTLLLPVVGVAGGVLALGEAMTMEMVIGGGLIIVGVGIVALRQAARGEIAPVRPH 292
BLAST of mRNA_D-herbacea_F_contig1152.1135.1 vs. uniprot
Match: A0A7Y0DZX2_9PROT (EamA family transporter n=1 Tax=Pacificispira spongiicola TaxID=2729598 RepID=A0A7Y0DZX2_9PROT) HSP 1 Score: 333 bits (853), Expect = 1.810e-111 Identity = 164/285 (57.54%), Postives = 211/285 (74.04%), Query Frame = 1
Query: 1 MKPFDLAIVLFVVTIWGLNFVFVKIGVAEIPPFLFMALRFGVVAAILLPFIKWPHGRGKALLAYSLILGVLHFGLMFNAIHLIDASTVALLSQLNTPFAVILSAVLFRDYPGWKRVLGIAIAFGGCFVIAGEPRFDGALLPILMVVGGTFAWAVAAVQAKQLGAIGPFALNGWMALFATPPLLLISLMTETGQLDALRGISMNAVISVLYQSVLVVIVGYGLWYGLIKRYPLSRVIPFTLLMPVVGVAGGVLALGEAMTIEMVIGGGLIIVGVGIVALRQAARGE 855
M+ D+A LFV+ IWG NFV VK G+ + P+L +ALRF ++A L+PF+KWP GR + YS++LGV+HFGLMF+ + IDAST ALLSQLNTPFAVILSA +F+DYPGW+R+LGI+IAF GC V+ G+PRF+G + +L VV F WA AA QAK+LG + PF LNGWMAL P IS + E Q+ + + ++Q+ V I GYG+WYGLIK+YPLSRVIPFTLL+PVVGVAGGVL LG+A+T+ M+IGG +++VGVGIV +RQAARG
Sbjct: 1 MRALDVAKALFVILIWGSNFVVVKWGLQDFSPYLLLALRFALIACFLVPFVKWPKGRFWPIFRYSMMLGVIHFGLMFSGMQYIDASTAALLSQLNTPFAVILSAFMFKDYPGWRRILGISIAFAGCVVVGGQPRFEGTFIWVLAVVLAAFCWAYAATQAKRLGDLDPFTLNGWMALMVAPCWFAISFLVEDNQVAMMMDAGWKGWGAAVFQAAFVTITGYGIWYGLIKQYPLSRVIPFTLLLPVVGVAGGVLILGDALTLPMIIGGAMVVVGVGIVTIRQAARGS 285
BLAST of mRNA_D-herbacea_F_contig1152.1135.1 vs. uniprot
Match: A0A545T0W3_9PROT (EamA family transporter n=1 Tax=Denitrobaculum tricleocarpae TaxID=2591009 RepID=A0A545T0W3_9PROT) HSP 1 Score: 276 bits (707), Expect = 2.730e-89 Identity = 143/279 (51.25%), Postives = 191/279 (68.46%), Query Frame = 1
Query: 4 KPFDLAIVLFVVTIWGLNFVFVKIGVAEIPPFLFMALRFGVVAAILLPFIKWPHGRGKALLAYSLILGVLHFGLMFNAIHLIDASTVALLSQLNTPFAVILSAVLFRDYPGWKRVLGIAIAFGGCFVIAGEPRFDGALLPILMVVGGTFAWAVAAVQAKQLGAIGPFALNGWMALFATPPLLLISLMTETGQLDALRGISMNAVISVLYQSVLVVIVGYGLWYGLIKRYPLSRVIPFTLLMPVVGVAGGVLALGEAMTIEMVIGGGLIIVGVGIVALRQ 840
P LAI L V +WGLNF KIG+ +PP LFMALRF +VA +L+PF+K P GR + ++A + LG+LHF LMFN + +DA+T A+ QL PFA +L+AV F+D GW+R LG+AIAF G +IAGEPR DG L + MV+ W+VA VQ K L + FALN WMA+FATP LL SL+ E Q++ + I A +VLYQS++VV+ GYG WY L++RY ++ +PFTLL+PV+GV GV LGEA+T ++ GG L +VGV I+ LR+
Sbjct: 6 SPLHLAIFLAVALVWGLNFAVAKIGLTHLPPLLFMALRFALVAIVLIPFVKPPKGRWRQVMAIAFTLGLLHFSLMFNGLKDLDAATAAIAIQLQVPFAALLAAVFFKDKLGWRRALGMAIAFVGVALIAGEPRLDGQYLSLFMVIAAACTWSVANVQIKFLEGVDGFALNAWMAVFATPMLLAASLVFEDNQIETVGQIPWPATFAVLYQSIMVVVFGYGCWYWLLRRYSFNQAMPFTLLVPVIGVFAGVFFLGEALTPYLIAGGCLTVVGVAIIVLRR 284
BLAST of mRNA_D-herbacea_F_contig1152.1135.1 vs. uniprot
Match: A0A3N1KVY5_9PROT (O-acetylserine/cysteine efflux transporter n=1 Tax=Stella humosa TaxID=94 RepID=A0A3N1KVY5_9PROT) HSP 1 Score: 261 bits (666), Expect = 3.710e-83 Identity = 133/284 (46.83%), Postives = 190/284 (66.90%), Query Frame = 1
Query: 13 DLAIVLFVVTIWGLNFVFVKIGVAEIPPFLFMALRFGVVAAILLPFIKWPHGRGKALLAYSLILGVLHFGLMFNAIHLIDASTVALLSQLNTPFAVILSAVLFRDYPGWKRVLGIAIAFGGCFVIAGEPRFDGALLPILMVVGGTFAWAVAAVQAKQLGAIGPFALNGWMALFATPPLLLISLMTETGQLDALRGISMNAVISVLYQSVLVVIVGYGLWYGLIKRYPLSRVIPFTLLMPVVGVAGGVLALGEAMTIEMVIGGGLIIVGVGIVALRQAARGETSP 864
DL IVL +VT+WG+NF K+G E+PP L A RF +VA +L+PF+ P G+ + LL + +LG +HF LMF + +D++TVA+ SQL PFA +L+AV F+DY GW+R LG+ +AF G V+AGEPR P+L VV G FAWAVA +Q K++GAI LNGWMA FA P LLL+S + E ++ + SV+Y +V+V I+GYGLWY +++ YP++ V+P+TLL+PV+GV G+ LGE ++ +V+GGG +VGV I+ R+ + P
Sbjct: 5 DLLIVLLIVTVWGMNFPVAKLGFTELPPILLTAFRFTLVAVLLVPFVPRPRGQYRQLLFLATVLGGVHFSLMFVGLSRLDSATVAIASQLTVPFAALLAAVAFKDYLGWRRTLGMGVAFAGVAVMAGEPRILADPWPLLWVVIGAFAWAVANIQVKRIGAIDGLVLNGWMAAFAAPQLLLVSWLVEGDSWHRVQSAGLAGFGSVVYMAVMVTILGYGLWYRILRAYPVNMVMPYTLLVPVIGVVAGIGLLGEPLSGPIVVGGGATLVGVAIIVWRRPRLTDQQP 288
BLAST of mRNA_D-herbacea_F_contig1152.1135.1 vs. uniprot
Match: A0A437QGY6_9PROT (DMT family transporter n=2 Tax=Hwanghaeella grinnelliae TaxID=2500179 RepID=A0A437QGY6_9PROT) HSP 1 Score: 258 bits (659), Expect = 3.290e-82 Identity = 130/266 (48.87%), Postives = 180/266 (67.67%), Query Frame = 1
Query: 43 IWGLNFVFVKIGVAEIPPFLFMALRFGVVAAILLPFIKWPHGRGKALLAYSLILGVLHFGLMFNAIHLIDASTVALLSQLNTPFAVILSAVLFRDYPGWKRVLGIAIAFGGCFVIAGEPRFDGALLPILMVVGGTFAWAVAAVQAKQLGAIGPFALNGWMALFATPPLLLISLMTETGQLDALRGISMNAVISVLYQSVLVVIVGYGLWYGLIKRYPLSRVIPFTLLMPVVGVAGGVLALGEAMTIEMVIGGGLIIVGVGIVALRQ 840
+WG NF +K + +PPF +ALR+ VVA +L+PFIK P K + Y+ ++G LHFG + + +DA+TVALL+Q+ PF+ IL+A++F+DYPGW+R LGIA+AF G VIAGEPRF+G +L + MVV WAV Q K + + ALNGWMALFATP L + SL+ E GQ+DA ++ YQS +V + GYG W+ L+K+YP+S ++PFTLL P GVA GVL L E +T+ M+IGG + + GVGI+ LR+
Sbjct: 3 VWGGNFAVMKTAIEYVPPFSLLALRYAVVALVLVPFIKVPRAHLKQIFIYAFLMGGLHFGFIMTGLRYVDAATVALLTQVGVPFSTILAAIIFKDYPGWRRWLGIALAFVGAAVIAGEPRFEGDILWVGMVVFAALVWAVGNTQVKAMSGVDGLALNGWMALFATPMLAVWSLLFEEGQVDAYVSAGWIGGAALFYQSAMVTLFGYGCWFWLMKKYPISLLMPFTLLGPTFGVAAGVLFLAEPVTVNMIIGGLMTLGGVGIIVLRR 268
BLAST of mRNA_D-herbacea_F_contig1152.1135.1 vs. uniprot
Match: A0A1Y6CR09_9HYPH (O-acetylserine/cysteine efflux transporter n=1 Tax=Tistlia consotensis USBA 355 TaxID=560819 RepID=A0A1Y6CR09_9HYPH) HSP 1 Score: 256 bits (655), Expect = 2.070e-81 Identity = 134/278 (48.20%), Postives = 187/278 (67.27%), Query Frame = 1
Query: 7 PFDLAIVLFVVTIWGLNFVFVKIGVAEIPPFLFMALRFGVVAAILLPFIKWPHGRGKALLAYSLILGVLHFGLMFNAIHLIDASTVALLSQLNTPFAVILSAVLFRDYPGWKRVLGIAIAFGGCFVIAGEPRFDGALLPILMVVGGTFAWAVAAVQAKQLGAIGPFALNGWMALFATPPLLLISLMTETGQLDALRGISMNAVISVLYQSVLVVIVGYGLWYGLIKRYPLSRVIPFTLLMPVVGVAGGVLALGEAMTIEMVIGGGLIIVGVGIVALRQ 840
P L + + ++ IWG NF K G+ E+PP + M LRFGVVA IL+P + P GR + +L S +LG LHF +MF + IDAST A+ QL PFA +L+AV +D GW+R LG+AIAF G V+AG+PR DG+ L + +VVG WA++ V K L + + + GWM+LFATP L L SL+ E GQ AL S A +V Y S++V+IVGYG WY L+KR+P++ +PFTLL+P+ G A GVLALGE++ + ++IGG L++ GVGI+ +R+
Sbjct: 8 PLHLLVFVGIMMIWGFNFAMAKWGLMELPPLVLMTLRFGVVALILVPLVPRPSGRWREILLLSFLLGFLHFAMMFTGLKGIDASTAAIAIQLQVPFASLLAAVFLKDRIGWRRGLGMAIAFAGVAVVAGQPRLDGSYLSLGLVVGAALIWAISNVLVKTLHDLSGWTIAGWMSLFATPQLALGSLLLEHGQRAALANASWLAWSAVAYTSLVVMIVGYGAWYWLLKRHPVTVAMPFTLLLPIFGAASGVLALGESLNLLLLIGGALVVAGVGIIVVRR 285
BLAST of mRNA_D-herbacea_F_contig1152.1135.1 vs. uniprot
Match: UPI001D03B59E (EamA family transporter n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI001D03B59E) HSP 1 Score: 253 bits (646), Expect = 6.710e-80 Identity = 129/280 (46.07%), Postives = 188/280 (67.14%), Query Frame = 1
Query: 1 MKPFDLAIVLFVVTIWGLNFVFVKIGVAEIPPFLFMALRFGVVAAILLPFIKWPHGRGKALLAYSLILGVLHFGLMFNAIHLIDASTVALLSQLNTPFAVILSAVLFRDYPGWKRVLGIAIAFGGCFVIAGEPRFDGALLPILMVVGGTFAWAVAAVQAKQLGAIGPFALNGWMALFATPPLLLISLMTETGQLDALRGISMNAVISVLYQSVLVVIVGYGLWYGLIKRYPLSRVIPFTLLMPVVGVAGGVLALGEAMTIEMVIGGGLIIVGVGIVALRQ 840
+ P L +VL ++ +WGLNF KIG+ +IPP +A RF +VA +LLPF K PHG+ A+ A +++LG+LHF MFN + +DA+T A+ QL PFA +L+A+ F+D GW+R LG+AIAF G VIAGEPR DG L + V+ F W++A V K+L + LN W+A+FATP L S + E GQ++A+R A +V+YQ+V VV++GYG WY L++RY +++V+ TLL+P+ GV GV+ L E +T+ ++ GG + I GVGI+ LR+
Sbjct: 17 LTPLHLLLVLGIMILWGLNFAVAKIGLQQIPPIFLVACRFLLVAILLLPFAKRPHGQWGAVFAIAVVLGLLHFSFMFNGLKTVDAATAAITIQLQVPFASLLAAIFFKDRLGWRRALGMAIAFLGVAVIAGEPRLDGQYLALSFVLTACFIWSIANVMIKRLKEVDGITLNAWLAVFATPMLFAASAVLEDGQIEAVRQADFWAYFAVVYQAVAVVVIGYGCWYWLLQRYQMNQVMSATLLVPLFGVMSGVVFLDEELTVNLISGGVMTIAGVGIIILRR 296
BLAST of mRNA_D-herbacea_F_contig1152.1135.1 vs. uniprot
Match: UPI001A963F8B (EamA family transporter n=1 Tax=Azospirillum sp. SYSU D00513 TaxID=2812561 RepID=UPI001A963F8B) HSP 1 Score: 252 bits (643), Expect = 1.190e-79 Identity = 129/276 (46.74%), Postives = 187/276 (67.75%), Query Frame = 1
Query: 13 DLAIVLFVVTIWGLNFVFVKIGVAEIPPFLFMALRFGVVAAILLPFIKWPHGRGKALLAYSLILGVLHFGLMFNAIHLIDASTVALLSQLNTPFAVILSAVLFRDYPGWKRVLGIAIAFGGCFVIAGEPRFDGALLPILMVVGGTFAWAVAAVQAKQLGAIGPFALNGWMALFATPPLLLISLMTETGQLDALRGISMNAVISVLYQSVLVVIVGYGLWYGLIKRYPLSRVIPFTLLMPVVGVAGGVLALGEAMTIEMVIGGGLIIVGVGIVALRQ 840
D + L V+ IWG NFV K G+AE PP M LRF VVAA+L+PF +P GR + SL+LG +HF LMFN + +DA+T ++++Q PF+ +++A+ F+D GW+R +G+A AF G VIAG+PR G + P+LM++ +FA+AVA++Q K LG + FALNGWMALFA P LL++SL+ ETGQ++AL + ++ Y + V I YGLWY L+ RY +++ IP+ L++PV GVA GVL + + T+ +VIGG + + GV IV R+
Sbjct: 5 DSLLALLVMAIWGFNFVVAKWGMAEFPPMFIMFLRFVVVAAVLVPFAPFPRGRLLQIFLLSLVLGTIHFPLMFNGLLGLDAATASIVAQTQVPFSSLMAAIFFKDKLGWRRAVGMAAAFAGIIVIAGQPRLSGQITPLLMILAASFAFAVASIQMKLLGDVNGFALNGWMALFALPQLLILSLILETGQIEALLNSTWRGWGAIGYMAFGVTIFAYGLWYPLLSRYAVNQTIPYLLMVPVFGVAAGVLLMDDPFTLSLVIGGLMTVGGVAIVVKRR 280
BLAST of mRNA_D-herbacea_F_contig1152.1135.1 vs. uniprot
Match: A0A2S2CSL6_9PROT (Multidrug DMT transporter permease n=1 Tax=Azospirillum thermophilum TaxID=2202148 RepID=A0A2S2CSL6_9PROT) HSP 1 Score: 250 bits (639), Expect = 4.770e-79 Identity = 129/273 (47.25%), Postives = 187/273 (68.50%), Query Frame = 1
Query: 28 LFVVTIWGLNFVFVKIGVAEIPPFLFMALRFGVVAAILLPFIKWPHGRGKALLAYSLILGVLHFGLMFNAIHLIDASTVALLSQLNTPFAVILSAVLFRDYPGWKRVLGIAIAFGGCFVIAGEPRFDGALLPILMVVGGTFAWAVAAVQAKQLGAIGPFALNGWMALFATPPLLLISLMTETGQLDALRGISMNAVISVLYQSVLVVIVGYGLWYGLIKRYPLSRVIPFTLLMPVVGVAGGVLALGEAMTIEMVIGGGLIIVGVGIVALRQAA 846
L V+ +WGLNFV K G+AE PP M LRF +VA +L+PF + P GR + A S+ LG +HF LMFN + IDA+T +L +Q PF+ +L+AV+F+D GW+R LG++ A G VIAGEPR AL + M++G + A+AVA++Q K+LG + FALNGWMAL A P LL++SL+ E GQ++A+RG S +++Y +V+V IV YGLWY L++ Y +++ +P+ L +PV GVA GV +G+ +T+ + IGG L I GV ++ R+ A
Sbjct: 10 LLVMALWGLNFVVAKWGLAEFPPLFIMFLRFTLVALLLVPFARVPRGRMLPIAALSVTLGTVHFPLMFNGLTGIDAATASLAAQAQVPFSSLLAAVVFKDKLGWRRALGMSTALAGIAVIAGEPRLGDALPSLFMILGASLAFAVASIQMKKLGGLDGFALNGWMALMAAPQLLILSLLLEHGQIEAVRGASAWGWSAIVYMAVVVTIVAYGLWYPLLRHYDVNQTMPYLLTVPVFGVAAGVALMGDPVTLNLAIGGALTIGGVAVIVKRRPA 282
BLAST of mRNA_D-herbacea_F_contig1152.1135.1 vs. uniprot
Match: A0A5J6MVK6_9PROT (O-acetylserine/cysteine exporter n=1 Tax=Hypericibacter adhaerens TaxID=2602016 RepID=A0A5J6MVK6_9PROT) HSP 1 Score: 249 bits (636), Expect = 1.360e-78 Identity = 134/283 (47.35%), Postives = 189/283 (66.78%), Query Frame = 1
Query: 1 MKPFDLAIVLFVVTIWGLNFVFVKIGVAEIPPFLFMALRFGVVAAILLPFIKWPHGRGKALLAYSLILGVLHFGLMFNAIHLIDASTVALLSQLNTPFAVILSAVLFRDYPGWKRVLGIAIAFGGCFVIAGEPRFDGALLPILMVVGGTFAWAVAAVQAKQLG-AIGPFALNGWMALFATPPLLLISLMTETGQLDALRGISMNAVISVLYQSVLVVIVGYGLWYGLIKRYPLSRVIPFTLLMPVVGVAGGVLALGEAMTIEMVIGGGLIIVGVGIVALRQAA 846
MKP +A++L V+ IWG NFV VK G+ +PPF FMALRF +V+ +LLPFIK P R + L A S+ LG+LHF LMF + IDAST A+ QL PFA +L+A F+D GW+R G+A+AFGG +IAGEPRF G LP+++V+G WA A VQ K++G A+ LNGW+A A P LLL++L+ E ++ + + YQS+LV ++GY +WY +++ +P+++V+PFTL +P+ GV G+L LGE +T MVIGG + GV I +R+ A
Sbjct: 1 MKPLHVALILLVMMIWGFNFVVVKFGLMLMPPFTFMALRFFIVSLMLLPFIKLPP-RWRELAALSVTLGILHFSLMFTGLRHIDASTAAIAIQLQVPFAALLAAYFFKDRIGWRRSFGMAVAFGGVALIAGEPRFQGGYLPLILVIGAACVWAFANVQIKRIGNAMDVMTLNGWIAALAFPQLLLVALLIEGNPIEIVPWDHWGVWGVLAYQSLLVTVLGYSIWYRMMRIFPVNQVMPFTLSVPLFGVLAGILLLGEPLTWFMVIGGIATLAGVAICVIRRPA 282 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1152.1135.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig1152.1135.1 >prot_D-herbacea_F_contig1152.1135.1 ID=prot_D-herbacea_F_contig1152.1135.1|Name=mRNA_D-herbacea_F_contig1152.1135.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=293bp MKPFDLAIVLFVVTIWGLNFVFVKIGVAEIPPFLFMALRFGVVAAILLPFback to top mRNA from alignment at D-herbacea_F_contig1152:20966..21844- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig1152.1135.1 ID=mRNA_D-herbacea_F_contig1152.1135.1|Name=mRNA_D-herbacea_F_contig1152.1135.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=879bp|location=Sequence derived from alignment at D-herbacea_F_contig1152:20966..21844- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig1152:20966..21844- >mRNA_D-herbacea_F_contig1152.1135.1 ID=mRNA_D-herbacea_F_contig1152.1135.1|Name=mRNA_D-herbacea_F_contig1152.1135.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1758bp|location=Sequence derived from alignment at D-herbacea_F_contig1152:20966..21844- (Desmarestia herbacea DmunF female)back to top |