mRNA_D-herbacea_F_contig1152.1134.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_D-herbacea_F_contig1152.1134.1
Unique Name	mRNA_D-herbacea_F_contig1152.1134.1
Type	mRNA
Organism	Desmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)

Homology

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BLAST of mRNA_D-herbacea_F_contig1152.1134.1 vs. uniprot
Match: A0A2D9I2B2_9PROT (GDP-mannose 4,6-dehydratase n=3 Tax=Rhodospirillales TaxID=204441 RepID=A0A2D9I2B2_9PROT)

HSP 1 Score: 701 bits (1810), Expect = 2.160e-255
Identity = 342/346 (98.84%), Postives = 344/346 (99.42%), Query Frame = 1

Query:    1 MKKALITGITGQDGSYLAEFLLKKGYEVHGIVRRASTFTTERIDHIYQDPHDSHLRLKLHYGDLADGSGLRRILEHVQPDEVYNLGAQSHVRVSFDQPEYTADVVGTGTLRLLEALRDYIHTTKKSAKLYQAGSSEMFGAANPPQNEATEFYPRSPYAVGKVAGFWFCKNYREAYGLYVANGILFNHESPRRGETFVTRKITRAVGRIKLGLQDKLFLGNLDARRDWGFAGDYVQAMWLMLQQEKPDDYVVATGKAYSVREFLEAAFGYAGLDYKKHVEFDARYLRPTEVDYLLGDPSKIKKDLGWEPKVGFQELVAMMVDNDMDLARREKVLLDAGHTVPSPVGA 1038
            MKKALITGITGQDGSYLAEFLLKKGYEVHGIVRRASTFTTERIDHIYQDPH+SHL LKLHYGDLADGSGLRRILEHVQPDEVYNLGAQSHVRVSFDQPEYTADVVGTGTLRLLEALRDYIHT KKSAKLYQAGSSEMFGAANPPQNEATEFYPRSPYAVGKVAGFWFCKNYREAYGLYVANGILFNHESPRRGETFVTRKITRAVGRIKLGLQDKLFLGNLDARRDWGFAGDYVQAMWLMLQQEKPDDYVVATGKAYSVREFLEAAFGYAGLDYKKHVEFDARYLRPTEVDYLLGDPSKIKK+LGWEPKVGFQELVAMMVDNDMDLARREKVLLDAGHTVPSPVGA
Sbjct:    1 MKKALITGITGQDGSYLAEFLLKKGYEVHGIVRRASTFTTERIDHIYQDPHESHLHLKLHYGDLADGSGLRRILEHVQPDEVYNLGAQSHVRVSFDQPEYTADVVGTGTLRLLEALRDYIHTAKKSAKLYQAGSSEMFGAANPPQNEATEFYPRSPYAVGKVAGFWFCKNYREAYGLYVANGILFNHESPRRGETFVTRKITRAVGRIKLGLQDKLFLGNLDARRDWGFAGDYVQAMWLMLQQEKPDDYVVATGKAYSVREFLEAAFGYAGLDYKKHVEFDARYLRPTEVDYLLGDPSKIKKELGWEPKVGFQELVAMMVDNDMDLARREKVLLDAGHTVPSPVGA 346

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BLAST of mRNA_D-herbacea_F_contig1152.1134.1 vs. uniprot
Match: A0A2E2E2V8_9PROT (GDP-mannose 4,6-dehydratase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E2E2V8_9PROT)

HSP 1 Score: 652 bits (1683), Expect = 4.940e-236
Identity = 311/343 (90.67%), Postives = 331/343 (96.50%), Query Frame = 1

Query:    1 MKKALITGITGQDGSYLAEFLLKKGYEVHGIVRRASTFTTERIDHIYQDPHDSHLRLKLHYGDLADGSGLRRILEHVQPDEVYNLGAQSHVRVSFDQPEYTADVVGTGTLRLLEALRDYIHTTKKSAKLYQAGSSEMFGAANPPQNEATEFYPRSPYAVGKVAGFWFCKNYREAYGLYVANGILFNHESPRRGETFVTRKITRAVGRIKLGLQDKLFLGNLDARRDWGFAGDYVQAMWLMLQQEKPDDYVVATGKAYSVREFLEAAFGYAGLDYKKHVEFDARYLRPTEVDYLLGDPSKIKKDLGWEPKVGFQELVAMMVDNDMDLARREKVLLDAGHTVPSP 1029
            MK ALITGITGQDGSYLAEFLL KGYEVHG+VRRASTFTTERIDH+YQDPH+SHLRLKLHYGDL+DG+GLRRILEHVQPDE+YNLGAQSHVRVSFDQPEYTADVVGTGTLRLLEA+RDY HT+K++AKLYQAGSSEMFGAA PPQ+EAT FYPRSPYAVGKVA FW+C NYREAY L+VANGILFNHESPRRGETFVTRKITRAVGRIKLGLQDKLFLGNLDARRDWGFAGDYV+AMW+MLQQ++PDDYVVATG AYSVREFLEAAFGYAGLDY+KHVEFDARYLRPTEVDYLLGDPSKIK  LGW+PKVGFQELVAMMVDNDMDLARRE+VLL AGHTVPSP
Sbjct:    1 MKSALITGITGQDGSYLAEFLLSKGYEVHGVVRRASTFTTERIDHVYQDPHESHLRLKLHYGDLSDGTGLRRILEHVQPDEIYNLGAQSHVRVSFDQPEYTADVVGTGTLRLLEAMRDYTHTSKRTAKLYQAGSSEMFGAATPPQSEATAFYPRSPYAVGKVAAFWYCTNYREAYNLFVANGILFNHESPRRGETFVTRKITRAVGRIKLGLQDKLFLGNLDARRDWGFAGDYVEAMWMMLQQDEPDDYVVATGTAYSVREFLEAAFGYAGLDYQKHVEFDARYLRPTEVDYLLGDPSKIKSKLGWQPKVGFQELVAMMVDNDMDLARREQVLLAAGHTVPSP 343

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BLAST of mRNA_D-herbacea_F_contig1152.1134.1 vs. uniprot
Match: A0A7Y0HG00_9PROT (GDP-mannose 4,6-dehydratase n=1 Tax=Pacificispira spongiicola TaxID=2729598 RepID=A0A7Y0HG00_9PROT)

HSP 1 Score: 628 bits (1620), Expect = 1.970e-226
Identity = 300/345 (86.96%), Postives = 320/345 (92.75%), Query Frame = 1

Query:    1 MKKALITGITGQDGSYLAEFLLKKGYEVHGIVRRASTFTTERIDHIYQDPHDSHLRLKLHYGDLADGSGLRRILEHVQPDEVYNLGAQSHVRVSFDQPEYTADVVGTGTLRLLEALRDYIHTTKKSAKLYQAGSSEMFGAANPPQNEATEFYPRSPYAVGKVAGFWFCKNYREAYGLYVANGILFNHESPRRGETFVTRKITRAVGRIKLGLQDKLFLGNLDARRDWGFAGDYVQAMWLMLQQEKPDDYVVATGKAYSVREFLEAAFGYAGLDYKKHVEFDARYLRPTEVDYLLGDPSKIKKDLGWEPKVGFQELVAMMVDNDMDLARREKVLLDAGHTVPSPVG 1035
            M+KALITGITGQDGSYLAE LL KGYEVHGIVRRASTF TERIDHIYQDPH+SHLRLKLHYGDLADG+GLRRILEHVQPDE+YNLGAQSHVRVSFDQPEYTADVVGTGTLRLLEA+RDY   T +  KLYQAGSSEMFGAANPPQNE TEFYPRSPYAVGKVAGFWFCKNYREAY L+VANGILFNHESPRRGETFVTRKITRAVGRIKLGLQDKLFLGNLDA+RDWGFAGDYV+AMW MLQQ++ DDYVVATGKAYSVR+FLEAAFG+AG+DYKKHVEFD RYLRPTEVDYLLGDPSK K+ LGWEPKV F ELV MMVD+DMD+A REK L+DAGH + +  G
Sbjct:    1 MRKALITGITGQDGSYLAELLLSKGYEVHGIVRRASTFNTERIDHIYQDPHESHLRLKLHYGDLADGTGLRRILEHVQPDEIYNLGAQSHVRVSFDQPEYTADVVGTGTLRLLEAIRDYTQNTGRMTKLYQAGSSEMFGAANPPQNEGTEFYPRSPYAVGKVAGFWFCKNYREAYNLFVANGILFNHESPRRGETFVTRKITRAVGRIKLGLQDKLFLGNLDAKRDWGFAGDYVEAMWRMLQQDEADDYVVATGKAYSVRDFLEAAFGHAGIDYKKHVEFDPRYLRPTEVDYLLGDPSKAKEKLGWEPKVDFNELVRMMVDHDMDMAAREKTLIDAGHAISTRAG 345

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BLAST of mRNA_D-herbacea_F_contig1152.1134.1 vs. uniprot
Match: A0A192IQX0_9HYPH (GDP-mannose 4,6-dehydratase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A192IQX0_9HYPH)

HSP 1 Score: 584 bits (1505), Expect = 6.520e-209
Identity = 279/340 (82.06%), Postives = 309/340 (90.88%), Query Frame = 1

Query:    1 MKKALITGITGQDGSYLAEFLLKKGYEVHGIVRRASTFTTERIDHIYQDPHDSHLRLKLHYGDLADGSGLRRILEHVQPDEVYNLGAQSHVRVSFDQPEYTADVVGTGTLRLLEALRDYIHTTKKSAKLYQAGSSEMFGAANPPQNEATEFYPRSPYAVGKVAGFWFCKNYREAYGLYVANGILFNHESPRRGETFVTRKITRAVGRIKLGLQDKLFLGNLDARRDWGFAGDYVQAMWLMLQQEKPDDYVVATGKAYSVREFLEAAFGYAGLDYKKHVEFDARYLRPTEVDYLLGDPSKIKKDLGWEPKVGFQELVAMMVDNDMDLARREKVLLDAGHTV 1020
            M++ALITGITGQDGSYLAE LL KGYEVHGIVRRASTFTTERIDHIYQDPH+SHLRLKLHYGDL+DG+GLRR+LE  +PDEVYNLGAQSHVRVSFDQPEYTAD+VGTGTLRLLEALRDY   T +  KLYQAGSSEMFGAA PPQ E T FYPRSPYAVGKVAG+WF  NYREAYGL+VANGILFNHESPRRGETFVTRKITRAVGRIK+GLQDKLFLGNL+A+RDWGFAGD+V+ MW MLQQ++PDDYV+ATG+A+SVREFL+ AF +AGL  + HVEFD RYLRPTEVD+LLGDPSK ++ LGW PKVGF+ELV MMVDNDM+LARRE+ L DAGH V
Sbjct:    1 MRRALITGITGQDGSYLAELLLAKGYEVHGIVRRASTFTTERIDHIYQDPHESHLRLKLHYGDLSDGTGLRRVLEMARPDEVYNLGAQSHVRVSFDQPEYTADIVGTGTLRLLEALRDYTQNTGRQVKLYQAGSSEMFGAAPPPQGETTAFYPRSPYAVGKVAGYWFSVNYREAYGLFVANGILFNHESPRRGETFVTRKITRAVGRIKMGLQDKLFLGNLNAKRDWGFAGDFVEGMWRMLQQDEPDDYVLATGEAHSVREFLDLAFAHAGLAPEAHVEFDPRYLRPTEVDHLLGDPSKAREKLGWTPKVGFEELVRMMVDNDMELARRERTLKDAGHLV 340

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BLAST of mRNA_D-herbacea_F_contig1152.1134.1 vs. uniprot
Match: UPI001FF3590F (GDP-mannose 4,6-dehydratase n=1 Tax=Kordiimonas sp. 5E331 TaxID=2917717 RepID=UPI001FF3590F)

HSP 1 Score: 574 bits (1480), Expect = 4.190e-205
Identity = 270/341 (79.18%), Postives = 309/341 (90.62%), Query Frame = 1

Query:    1 MKKALITGITGQDGSYLAEFLLKKGYEVHGIVRRASTFTTERIDHIYQDPHDSHLRLKLHYGDLADGSGLRRILEHVQPDEVYNLGAQSHVRVSFDQPEYTADVVGTGTLRLLEALRDYIHTTKKSAKLYQAGSSEMFGAANPPQNEATEFYPRSPYAVGKVAGFWFCKNYREAYGLYVANGILFNHESPRRGETFVTRKITRAVGRIKLGLQDKLFLGNLDARRDWGFAGDYVQAMWLMLQQEKPDDYVVATGKAYSVREFLEAAFGYAGLDYKKHVEFDARYLRPTEVDYLLGDPSKIKKDLGWEPKVGFQELVAMMVDNDMDLARREKVLLDAGHTVP 1023
            MK+ALITGITGQDGSYLAEFLL+KGYEVHGI+RRAS+F T RIDH+Y DPH+   RL LHYGDLAD SGLRRIL   +PDEVYNLGAQSHVRVSFDQPEYT DVVGTGTLRLL+A+RDYI  + K  ++YQAGSSEMFGAANPPQ+EATEFYPRSPYAVGKVAG+W+C NYREAY ++VANGILFNHESPRRGETFVTRKITRA+GRIKLGLQDKLFLGNLDA+RDWGFAGDYV+AMWLMLQQ+KPDDYVVATG+AYSVREFLE AF   GLD++K+VEFD RYLRPTEVD+LLGDP+K +K L W+PK  F++LV MMV++D++LA++EK L+DAGH +P
Sbjct:    1 MKRALITGITGQDGSYLAEFLLEKGYEVHGIIRRASSFNTSRIDHLYTDPHEKDARLFLHYGDLADSSGLRRILGKAKPDEVYNLGAQSHVRVSFDQPEYTGDVVGTGTLRLLDAVRDYIDESGKEVRVYQAGSSEMFGAANPPQSEATEFYPRSPYAVGKVAGYWYCVNYREAYDMFVANGILFNHESPRRGETFVTRKITRALGRIKLGLQDKLFLGNLDAKRDWGFAGDYVEAMWLMLQQDKPDDYVVATGEAYSVREFLEEAFSIVGLDWEKYVEFDPRYLRPTEVDFLLGDPAKAEKMLNWKPKTSFKQLVTMMVEHDLELAQKEKTLVDAGHDIP 341

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BLAST of mRNA_D-herbacea_F_contig1152.1134.1 vs. uniprot
Match: UPI001FCC7823 (GDP-mannose 4,6-dehydratase n=3 Tax=Thermus TaxID=270 RepID=UPI001FCC7823)

HSP 1 Score: 553 bits (1426), Expect = 7.820e-197
Identity = 260/340 (76.47%), Postives = 299/340 (87.94%), Query Frame = 1

Query:    1 MKKALITGITGQDGSYLAEFLLKKGYEVHGIVRRASTFTTERIDHIYQDPHDSHLRLKLHYGDLADGSGLRRILEHVQPDEVYNLGAQSHVRVSFDQPEYTADVVGTGTLRLLEALRDYIHTTKKSAKLYQAGSSEMFGAANPPQNEATEFYPRSPYAVGKVAGFWFCKNYREAYGLYVANGILFNHESPRRGETFVTRKITRAVGRIKLGLQDKLFLGNLDARRDWGFAGDYVQAMWLMLQQEKPDDYVVATGKAYSVREFLEAAFGYAGLDYKKHVEFDARYLRPTEVDYLLGDPSKIKKDLGWEPKVGFQELVAMMVDNDMDLARREKVLLDAGHTV 1020
            MKKALITGITGQDGSYLAE LL+KGYEVHGI+RRASTF T+RIDH+Y+DPHD   RL LHYGDL DG+GLRRILE VQPDEVYNLGAQSHV+VSF+QPEYTADVV TGTLRLLEALRDYI  + K  ++YQAGSSEMFGA+ PPQNE T FYPRSPYA  KVA +W+  NYREAYGL++ NGILFNHESPRRGETFVTRKITRAVGRIK+GLQ KL+LGNL+A+RDWG+AGDYV+AMWLMLQQ +PDDYV+ATG+++SVREFLE AFGY GLD++++VE D RY RPTEVD+L GD +K +  LGW PKV F+ELV MMVD+D++LAR+EK L DAGH V
Sbjct:    1 MKKALITGITGQDGSYLAELLLQKGYEVHGIIRRASTFNTDRIDHLYKDPHDPEARLFLHYGDLTDGTGLRRILEKVQPDEVYNLGAQSHVKVSFEQPEYTADVVATGTLRLLEALRDYIKVSGKEVRIYQAGSSEMFGASPPPQNEKTPFYPRSPYAAAKVAAYWYAVNYREAYGLFICNGILFNHESPRRGETFVTRKITRAVGRIKMGLQKKLYLGNLEAKRDWGYAGDYVEAMWLMLQQSEPDDYVIATGESHSVREFLEEAFGYVGLDWRRYVEVDPRYFRPTEVDHLQGDATKARAKLGWRPKVSFKELVRMMVDHDLELARQEKTLKDAGHAV 340

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BLAST of mRNA_D-herbacea_F_contig1152.1134.1 vs. uniprot
Match: A0A437QU13_9PROT (GDP-mannose 4,6-dehydratase n=1 Tax=Hwanghaeella grinnelliae TaxID=2500179 RepID=A0A437QU13_9PROT)

HSP 1 Score: 553 bits (1424), Expect = 1.410e-196
Identity = 262/342 (76.61%), Postives = 300/342 (87.72%), Query Frame = 1

Query:    1 MKKALITGITGQDGSYLAEFLLKKGYEVHGIVRRASTFTTERIDHIYQDPHDSHLRLKLHYGDLADGSGLRRILEHVQPDEVYNLGAQSHVRVSFDQPEYTADVVGTGTLRLLEALRDYIHTTKKSAKLYQAGSSEMFGAANPPQNEATEFYPRSPYAVGKVAGFWFCKNYREAYGLYVANGILFNHESPRRGETFVTRKITRAVGRIKLGLQDKLFLGNLDARRDWGFAGDYVQAMWLMLQQEKPDDYVVATGKAYSVREFLEAAFGYAGLDYKKHVEFDARYLRPTEVDYLLGDPSKIKKDLGWEPKVGFQELVAMMVDNDMDLARREKVLLDAGHTVPS 1026
            MK+ALITG+TGQDGSYLAEFLL KGYEVHG++RRASTF T+RIDH+YQDPH+S  RL LHYGDL+D +G+RR++  VQPDEVYNLGAQSHVRVSFDQPEYTAD+V TGTLRLL+A+RDYI       ++YQAGSSEMFGAA  PQ+EAT FYPRSPYAVGKVA  W+  NYREAYG++V+NGILFNHESPRRGETFVTRKITRA+GRIK GLQDKLFLGNLDA+RDWGFAGDYV+AMWLMLQ + PDD+VVATG+ YSVR+FL+ AF YAGLD++ HVEFDARYLRPTEVD LLGD SK ++ L W+PKV FQ+LV MMVD DMDLA +E+ L DAGH VPS
Sbjct:    1 MKRALITGVTGQDGSYLAEFLLSKGYEVHGLIRRASTFNTDRIDHLYQDPHESDARLFLHYGDLSDSTGIRRVIGKVQPDEVYNLGAQSHVRVSFDQPEYTADIVATGTLRLLDAIRDYIKEKDAQVRVYQAGSSEMFGAAPAPQSEATPFYPRSPYAVGKVAAHWYGVNYREAYGMFVSNGILFNHESPRRGETFVTRKITRALGRIKHGLQDKLFLGNLDAKRDWGFAGDYVEAMWLMLQADAPDDFVVATGETYSVRDFLQTAFSYAGLDWESHVEFDARYLRPTEVDLLLGDASKAQQRLDWKPKVSFQQLVEMMVDYDMDLAAQERTLSDAGHKVPS 342

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BLAST of mRNA_D-herbacea_F_contig1152.1134.1 vs. uniprot
Match: G2SKN5_RHOMG (GDP-mannose 4,6-dehydratase n=3 Tax=Bacteria TaxID=2 RepID=G2SKN5_RHOMG)

HSP 1 Score: 546 bits (1406), Expect = 8.370e-194
Identity = 251/340 (73.82%), Postives = 299/340 (87.94%), Query Frame = 1

Query:    1 MKKALITGITGQDGSYLAEFLLKKGYEVHGIVRRASTFTTERIDHIYQDPHDSHLRLKLHYGDLADGSGLRRILEHVQPDEVYNLGAQSHVRVSFDQPEYTADVVGTGTLRLLEALRDYIHTTKKSAKLYQAGSSEMFGAANPPQNEATEFYPRSPYAVGKVAGFWFCKNYREAYGLYVANGILFNHESPRRGETFVTRKITRAVGRIKLGLQDKLFLGNLDARRDWGFAGDYVQAMWLMLQQEKPDDYVVATGKAYSVREFLEAAFGYAGLDYKKHVEFDARYLRPTEVDYLLGDPSKIKKDLGWEPKVGFQELVAMMVDNDMDLARREKVLLDAGHTV 1020
            MKKALITGITGQDG+YL EFLL++GYEVHGI+RRASTF T+RIDH+Y+DPHD   RL LHYGDL+DG+GLR ILE VQPDE+YNLGAQSHV+VSF+QPEYT D+V TGTLRLLEA+RD++  + K  + YQAGSSEMFGAA PPQNE T FYPRSPYA  KVA +W+  NYREAYGL++ NGILFNHESPRRGETFVTRKITRA GRIK+GLQDKL+LGNL+ARRDWGFAGDYV+AMWLMLQQ++PDDYV+ATG+++SVREFLE AFG   LD++K+V+ D RY RPTEVD+LLGD SK ++ LGW P+V F+ELV MMV++D++LAR+E+ L DAGHT+
Sbjct:    1 MKKALITGITGQDGAYLTEFLLERGYEVHGIIRRASTFNTDRIDHLYRDPHDPQARLFLHYGDLSDGTGLRHILERVQPDEIYNLGAQSHVKVSFEQPEYTVDIVATGTLRLLEAVRDFVRHSGKQVRFYQAGSSEMFGAAPPPQNEKTPFYPRSPYAAAKVAAYWYAVNYREAYGLFICNGILFNHESPRRGETFVTRKITRAAGRIKMGLQDKLYLGNLEARRDWGFAGDYVEAMWLMLQQDEPDDYVIATGESHSVREFLELAFGMLDLDWRKYVKIDPRYFRPTEVDHLLGDASKAREKLGWRPRVSFEELVRMMVEHDLELARQERTLKDAGHTI 340

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BLAST of mRNA_D-herbacea_F_contig1152.1134.1 vs. uniprot
Match: A0A2E4NCC6_9PROT (GDP-mannose 4,6-dehydratase n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4NCC6_9PROT)

HSP 1 Score: 546 bits (1406), Expect = 8.370e-194
Identity = 259/340 (76.18%), Postives = 299/340 (87.94%), Query Frame = 1

Query:    1 MKKALITGITGQDGSYLAEFLLKKGYEVHGIVRRASTFTTERIDHIYQDPHDSHLRLKLHYGDLADGSGLRRILEHVQPDEVYNLGAQSHVRVSFDQPEYTADVVGTGTLRLLEALRDYIHTTKKSAKLYQAGSSEMFGAANPPQNEATEFYPRSPYAVGKVAGFWFCKNYREAYGLYVANGILFNHESPRRGETFVTRKITRAVGRIKLGLQDKLFLGNLDARRDWGFAGDYVQAMWLMLQQEKPDDYVVATGKAYSVREFLEAAFGYAGLDYKKHVEFDARYLRPTEVDYLLGDPSKIKKDLGWEPKVGFQELVAMMVDNDMDLARREKVLLDAGHTV 1020
            MKKALITGITGQDG+YLAEFLLKK YEVHGI+RRAS F T+RIDH+Y+DPHD + RL LHYGDL+DG+GLRRILE VQPDE+YNLGAQSHV+VSFDQPEYTADVVGTGTLRL EA+RD++  +    +LYQAGSSEMFG+A PPQ E T F PRSPYA+ KVAG+WF +NYREAY +++ANGILFNHESP RGETFVTRKITRAVGRIKLGLQDKLFLGNLDA+RDWGFAGDYV+ MW MLQ  +PDD+VVATG+A+SVREFLEAAF + GLD++K+VE D RY RPTEVD+LLG+PSK  + L W+PKV FQ LVAMMVD+DM+ A REK+L+DAGH V
Sbjct:    1 MKKALITGITGQDGAYLAEFLLKKDYEVHGIIRRASMFNTQRIDHLYRDPHDPNARLFLHYGDLSDGTGLRRILEAVQPDEIYNLGAQSHVKVSFDQPEYTADVVGTGTLRLFEAVRDHLKNSNSDIRLYQAGSSEMFGSAAPPQLETTAFEPRSPYAISKVAGYWFARNYREAYDMFIANGILFNHESPLRGETFVTRKITRAVGRIKLGLQDKLFLGNLDAKRDWGFAGDYVEVMWKMLQHSEPDDFVVATGEAHSVREFLEAAFIHVGLDFEKYVEIDQRYFRPTEVDHLLGNPSKAAEKLSWKPKVSFQGLVAMMVDHDMEQAEREKLLVDAGHKV 340

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BLAST of mRNA_D-herbacea_F_contig1152.1134.1 vs. uniprot
Match: A0A2E6QDG2_9PROT (GDP-mannose 4,6-dehydratase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6QDG2_9PROT)

HSP 1 Score: 544 bits (1401), Expect = 4.830e-193
Identity = 255/340 (75.00%), Postives = 297/340 (87.35%), Query Frame = 1

Query:    1 MKKALITGITGQDGSYLAEFLLKKGYEVHGIVRRASTFTTERIDHIYQDPHDSHLRLKLHYGDLADGSGLRRILEHVQPDEVYNLGAQSHVRVSFDQPEYTADVVGTGTLRLLEALRDYIHTTKKSAKLYQAGSSEMFGAANPPQNEATEFYPRSPYAVGKVAGFWFCKNYREAYGLYVANGILFNHESPRRGETFVTRKITRAVGRIKLGLQDKLFLGNLDARRDWGFAGDYVQAMWLMLQQEKPDDYVVATGKAYSVREFLEAAFGYAGLDYKKHVEFDARYLRPTEVDYLLGDPSKIKKDLGWEPKVGFQELVAMMVDNDMDLARREKVLLDAGHTV 1020
            MKKALITGITGQDG+YLAEFLL+KGYEVHGI+RRAS F T+RIDH+Y+DPHD    L LH+GDL+DG+GLRRILE VQPDE+YNLGAQSHV+VSF+QPEYTADVV TGTLRL +A+RD+     +  ++YQAGSSEMFG A PPQ+E+T F PRSPYA+ KVAGFWF +NYREAY +++ANGILFNHESP RGETFVTRKITRAVGRIKLGLQDKL+LGNLDA+RDWGFAGDYV+ MW MLQ + PDD+VVATG+A+SVREFLEAAF YAG+D++KHVE D RY RPTEVD+LLGD SK  + L W+PKV F++LVAMMVD DM  A REK+L+DAGHTV
Sbjct:    1 MKKALITGITGQDGAYLAEFLLEKGYEVHGIIRRASMFNTQRIDHLYRDPHDPDAHLFLHHGDLSDGTGLRRILEAVQPDEIYNLGAQSHVKVSFEQPEYTADVVATGTLRLFDAVRDHCQNNNQQVRIYQAGSSEMFGGAPPPQSESTTFEPRSPYAISKVAGFWFARNYREAYDMFIANGILFNHESPLRGETFVTRKITRAVGRIKLGLQDKLYLGNLDAKRDWGFAGDYVEVMWKMLQHDSPDDFVVATGEAHSVREFLEAAFSYAGIDWQKHVEIDQRYFRPTEVDHLLGDASKAAEVLNWKPKVNFEQLVAMMVDYDMQQAEREKILVDAGHTV 340

The following BLAST results are available for this feature:

BLAST of mRNA_D-herbacea_F_contig1152.1134.1 vs. uniprot

BLAST of mRNA_D-herbacea_F_contig1152.1134.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2D9I2B2_9PROT	2.160e-255	98.84	GDP-mannose 4,6-dehydratase n=3 Tax=Rhodospirillal...	[more]
A0A2E2E2V8_9PROT	4.940e-236	90.67	GDP-mannose 4,6-dehydratase n=1 Tax=Rhodospirillac...	[more]
A0A7Y0HG00_9PROT	1.970e-226	86.96	GDP-mannose 4,6-dehydratase n=1 Tax=Pacificispira ...	[more]
A0A192IQX0_9HYPH	6.520e-209	82.06	GDP-mannose 4,6-dehydratase n=3 Tax=Alphaproteobac...	[more]
UPI001FF3590F	4.190e-205	79.18	GDP-mannose 4,6-dehydratase n=1 Tax=Kordiimonas sp...	[more]
UPI001FCC7823	7.820e-197	76.47	GDP-mannose 4,6-dehydratase n=3 Tax=Thermus TaxID=...	[more]
A0A437QU13_9PROT	1.410e-196	76.61	GDP-mannose 4,6-dehydratase n=1 Tax=Hwanghaeella g...	[more]
G2SKN5_RHOMG	8.370e-194	73.82	GDP-mannose 4,6-dehydratase n=3 Tax=Bacteria TaxID...	[more]
A0A2E4NCC6_9PROT	8.370e-194	76.18	GDP-mannose 4,6-dehydratase n=2 Tax=Rhodospirillac...	[more]
A0A2E6QDG2_9PROT	4.830e-193	75.00	GDP-mannose 4,6-dehydratase n=1 Tax=Rhodospirillac...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-herbacea_F_contig1152	contig	D-herbacea_F_contig1152:18013..19053 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90	2022-09-19
OGS1.0 of Desmarestia herbacea DmunF female	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Bacteria
Seed ortholog score	538.1
Seed ortholog evalue	3e-150
Seed eggNOG ortholog	555079.Toce_0510
Preferred name	gmd
KEGG rclass	RC00402
KEGG ko	ko:K01711
KEGG Reaction	R00888
KEGG Pathway	ko00051,ko00520,ko01100,map00051,map00520,map01100
Hectar predicted targeting category	other localisation
GOs	GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008446,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016829,GO:0016835,GO:0016836,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509
EggNOG free text desc.	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
EggNOG OGs	1TQ9T@1239,24863@186801,42HYB@68295,COG1089@1,COG1089@2
EC	4.2.1.47
COG Functional cat.	M
Best tax level	Thermoanaerobacterales
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko01000
Exons	1
Model size	1041
Cds size	1041
Stop	1
Start	1

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927551.2747164-CDS-D-herbacea_F_contig1152:18012..19053	1622927551.2747164-CDS-D-herbacea_F_contig1152:18012..19053	Desmarestia herbacea DmunF female	CDS	D-herbacea_F_contig1152 18013..19053 -
1690790227.9698849-CDS-D-herbacea_F_contig1152:18012..19053	1690790227.9698849-CDS-D-herbacea_F_contig1152:18012..19053	Desmarestia herbacea DmunF female	CDS	D-herbacea_F_contig1152 18013..19053 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_D-herbacea_F_contig1152.1134.1	prot_D-herbacea_F_contig1152.1134.1	Desmarestia herbacea DmunF female	polypeptide	D-herbacea_F_contig1152 18013..19053 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at D-herbacea_F_contig1152:18013..19053-
coding sequence from alignment at D-herbacea_F_contig1152:18013..19053-

protein sequence of mRNA_D-herbacea_F_contig1152.1134.1

>prot_D-herbacea_F_contig1152.1134.1 ID=prot_D-herbacea_F_contig1152.1134.1|Name=mRNA_D-herbacea_F_contig1152.1134.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=347bp
MKKALITGITGQDGSYLAEFLLKKGYEVHGIVRRASTFTTERIDHIYQDP
HDSHLRLKLHYGDLADGSGLRRILEHVQPDEVYNLGAQSHVRVSFDQPEY
TADVVGTGTLRLLEALRDYIHTTKKSAKLYQAGSSEMFGAANPPQNEATE
FYPRSPYAVGKVAGFWFCKNYREAYGLYVANGILFNHESPRRGETFVTRK
ITRAVGRIKLGLQDKLFLGNLDARRDWGFAGDYVQAMWLMLQQEKPDDYV
VATGKAYSVREFLEAAFGYAGLDYKKHVEFDARYLRPTEVDYLLGDPSKI
KKDLGWEPKVGFQELVAMMVDNDMDLARREKVLLDAGHTVPSPVGA*

mRNA from alignment at D-herbacea_F_contig1152:18013..19053-

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_D-herbacea_F_contig1152.1134.1 ID=mRNA_D-herbacea_F_contig1152.1134.1|Name=mRNA_D-herbacea_F_contig1152.1134.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=1041bp|location=Sequence derived from alignment at D-herbacea_F_contig1152:18013..19053- (Desmarestia herbacea DmunF female)
ATGAAGAAGGCGTTGATTACAGGAATTACCGGTCAGGATGGTTCTTATCT
GGCGGAATTTCTGTTGAAAAAGGGATATGAGGTCCATGGCATTGTGCGCC
GGGCGTCCACTTTCACGACGGAGCGGATCGACCATATCTATCAGGATCCC
CATGACAGCCATCTGCGATTGAAATTGCATTACGGGGATTTGGCGGACGG
ATCGGGTCTGCGCCGTATCCTGGAACATGTTCAACCGGATGAGGTTTATA
ACCTGGGCGCGCAAAGCCATGTACGGGTCAGTTTTGATCAGCCGGAATAT
ACGGCCGATGTGGTGGGGACGGGAACCTTAAGGCTGTTGGAAGCCTTGCG
GGATTATATTCACACGACCAAGAAATCTGCAAAACTGTATCAGGCGGGCA
GTTCTGAAATGTTTGGCGCGGCAAATCCGCCACAGAATGAAGCGACCGAA
TTCTATCCGCGCAGCCCCTATGCCGTGGGTAAGGTCGCTGGATTCTGGTT
CTGTAAGAACTACCGGGAAGCATACGGCCTGTATGTTGCCAATGGCATAT
TATTCAATCATGAAAGCCCACGGCGGGGGGAAACCTTCGTGACCCGGAAA
ATTACCCGGGCGGTTGGGCGCATCAAGTTGGGCCTGCAAGATAAGTTATT
CCTGGGCAATCTGGACGCCAGACGGGATTGGGGTTTCGCCGGTGACTATG
TCCAGGCGATGTGGCTGATGCTGCAACAGGAAAAGCCGGATGATTATGTT
GTTGCGACCGGCAAGGCCTATTCCGTGCGGGAATTCCTGGAAGCAGCCTT
TGGCTATGCCGGGTTGGATTACAAGAAACATGTTGAATTCGACGCGCGCT
ATCTGCGCCCGACAGAGGTGGATTACCTGTTGGGGGATCCCAGCAAGATC
AAGAAAGACCTGGGGTGGGAGCCAAAGGTTGGTTTTCAGGAGCTCGTTGC
CATGATGGTTGATAATGACATGGACCTGGCGCGTCGCGAAAAGGTTCTGC
TGGATGCTGGTCATACGGTGCCCAGCCCGGTTGGGGCATAA

Coding sequence (CDS) from alignment at D-herbacea_F_contig1152:18013..19053-

>mRNA_D-herbacea_F_contig1152.1134.1 ID=mRNA_D-herbacea_F_contig1152.1134.1|Name=mRNA_D-herbacea_F_contig1152.1134.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2082bp|location=Sequence derived from alignment at D-herbacea_F_contig1152:18013..19053- (Desmarestia herbacea DmunF female)
ATGAAGAAGGCGTTGATTACAGGAATTACCGGTCAGGATGGTTCTTATCT
GGCGGAATTTCTGTTGAAAAAGGGATATGAGGTCCATGGCATTGTGCGCC
GGGCGTCCACTTTCACGACGGAGCGGATCGACCATATCTATCAGGATCCC
CATGACAGCCATCTGCGATTGAAATTGCATTACGGGGATTTGGCGGACGG
ATCGGGTCTGCGCCGTATCCTGGAACATGTTCAACCGGATGAGGTTTATA
ACCTGGGCGCGCAAAGCCATGTACGGGTCAGTTTTGATCAGCCGGAATAT
ACGGCCGATGTGGTGGGGACGGGAACCTTAAGGCTGTTGGAAGCCTTGCG
GGATTATATTCACACGACCAAGAAATCTGCAAAACTGTATCAGGCGGGCA
GTTCTGAAATGTTTGGCGCGGCAAATCCGCCACAGAATGAAGCGACCGAA
TTCTATCCGCGCAGCCCCTATGCCGTGGGTAAGGTCGCTGGATTCTGGTT
CTGTAAGAACTACCGGGAAGCATACGGCCTGTATGTTGCCAATGGCATAT
TATTCAATCATGAAAGCCCACGGCGGGGGGAAACCTTCGTGACCCGGAAA
ATTACCCGGGCGGTTGGGCGCATCAAGTTGGGCCTGCAAGATAAGTTATT
CCTGGGCAATCTGGACGCCAGACGGGATTGGGGTTTCGCCGGTGACTATG
TCCAGGCGATGTGGCTGATGCTGCAACAGGAAAAGCCGGATGATTATGTT
GTTGCGACCGGCAAGGCCTATTCCGTGCGGGAATTCCTGGAAGCAGCCTT
TGGCTATGCCGGGTTGGATTACAAGAAACATGTTGAATTCGACGCGCGCT
ATCTGCGCCCGACAGAGGTGGATTACCTGTTGGGGGATCCCAGCAAGATC
AAGAAAGACCTGGGGTGGGAGCCAAAGGTTGGTTTTCAGGAGCTCGTTGC
CATGATGGTTGATAATGACATGGACCTGGCGCGTCGCGAAAAGGTTCTGC
TGGATGCTGGTCATACGGTGCCCAGCCCGGTTGGGGCATAAATGAAGAAG
GCGTTGATTACAGGAATTACCGGTCAGGATGGTTCTTATCTGGCGGAATT
TCTGTTGAAAAAGGGATATGAGGTCCATGGCATTGTGCGCCGGGCGTCCA
CTTTCACGACGGAGCGGATCGACCATATCTATCAGGATCCCCATGACAGC
CATCTGCGATTGAAATTGCATTACGGGGATTTGGCGGACGGATCGGGTCT
GCGCCGTATCCTGGAACATGTTCAACCGGATGAGGTTTATAACCTGGGCG
CGCAAAGCCATGTACGGGTCAGTTTTGATCAGCCGGAATATACGGCCGAT
GTGGTGGGGACGGGAACCTTAAGGCTGTTGGAAGCCTTGCGGGATTATAT
TCACACGACCAAGAAATCTGCAAAACTGTATCAGGCGGGCAGTTCTGAAA
TGTTTGGCGCGGCAAATCCGCCACAGAATGAAGCGACCGAATTCTATCCG
CGCAGCCCCTATGCCGTGGGTAAGGTCGCTGGATTCTGGTTCTGTAAGAA
CTACCGGGAAGCATACGGCCTGTATGTTGCCAATGGCATATTATTCAATC
ATGAAAGCCCACGGCGGGGGGAAACCTTCGTGACCCGGAAAATTACCCGG
GCGGTTGGGCGCATCAAGTTGGGCCTGCAAGATAAGTTATTCCTGGGCAA
TCTGGACGCCAGACGGGATTGGGGTTTCGCCGGTGACTATGTCCAGGCGA
TGTGGCTGATGCTGCAACAGGAAAAGCCGGATGATTATGTTGTTGCGACC
GGCAAGGCCTATTCCGTGCGGGAATTCCTGGAAGCAGCCTTTGGCTATGC
CGGGTTGGATTACAAGAAACATGTTGAATTCGACGCGCGCTATCTGCGCC
CGACAGAGGTGGATTACCTGTTGGGGGATCCCAGCAAGATCAAGAAAGAC
CTGGGGTGGGAGCCAAAGGTTGGTTTTCAGGAGCTCGTTGCCATGATGGT
TGATAATGACATGGACCTGGCGCGTCGCGAAAAGGTTCTGCTGGATGCTG
GTCATACGGTGCCCAGCCCGGTTGGGGCATAA