mRNA_D-herbacea_F_contig1149.1093.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig1149.1093.1
Unique NamemRNA_D-herbacea_F_contig1149.1093.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
BLAST of mRNA_D-herbacea_F_contig1149.1093.1 vs. uniprot
Match: D7G544_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G544_ECTSI)

HSP 1 Score: 387 bits (993), Expect = 1.230e-128
Identity = 188/269 (69.89%), Postives = 216/269 (80.30%), Query Frame = 1
Query:   10 IFDDPHVTGLRGQRYDWYGEDGGWYAFLSTQNQLQMNLRVTSHLPTAFPERQLVTGVGLVTTGGHTIIVEITDPLDLTPTCQDTINIANAESRATPCLANGALRVTVDGREEMPGAGGYHFDGGIHITSVNLPLECQRFGDYPMWEGLSEEQKLMHAGGRNLRAEDGMAGAVTSIFDWLLSDSVMIAPPWCTKYLNELDGDVTALAGLQSDHAVLRIEAPNVSLRVNVGINSEQEQTLDDGRVVPTASFWQMDVRVEDAEGIAMAKGML 816
            I+DDPH+TGLRGQ +DWYG+DGGWYAFLST +QLQMNLRVTSHLP  FPERQLVTGV LVT GGHTI  +I DPLDL PTC  T++   +     PCL NG LR+TVDGRE++ GAG Y FDG IHIT+VNLPLECQRFGDY MW  L  EQ+L   G R+LR+ +       ++FDWL++DSVMIAP WC KYL EL+GDVTALA ++S HAVLRI  PN+SLRVNVGIN+E+EQTL DGRVVPTASFWQMDVRVE AEG+A AKGML
Sbjct:  242 IWDDPHLTGLRGQHFDWYGQDGGWYAFLSTPDQLQMNLRVTSHLPATFPERQLVTGVALVTEGGHTITADIVDPLDLAPTCHGTVDAVGS----APCLVNGGLRITVDGREQLQGAGEYDFDGDIHITAVNLPLECQRFGDYMMWGDLDVEQRL-RGGSRSLRSAE-------TVFDWLVADSVMIAPAWCVKYLKELNGDVTALASMKSSHAVLRIGTPNLSLRVNVGINTEREQTLQDGRVVPTASFWQMDVRVEHAEGMATAKGML 498          
BLAST of mRNA_D-herbacea_F_contig1149.1093.1 vs. uniprot
Match: A0A6H5JS96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS96_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 3.410e-64
Identity = 128/324 (39.51%), Postives = 188/324 (58.02%), Query Frame = 1
Query:    7 SIFDDPHVTGLRGQRYDWYGEDGGWYAFLSTQN-QLQMNLRVTSHLPTAFPERQLVTGVGLVTTGGHTIIVEITDPLDLTPTCQDTINIANAESRATPCLANGALRVTVDGRE---------EMPGAGGYHFDGGIHITSVNLPLECQRFGDYPMWEGLSEEQKLMHAGGRNLRAEDGMAGAVTSIFDWLLS-DSVMIAPPWCTKYLNELDGDVTALAGLQSDHAVLRIEAPNVSLRVNVGINSEQEQTLD-DGRVVPTASFWQMDVRVE--DAEGIAMAKGMLGETARPVRDEKTGQRVMTGLGVLRGEVEDYRVVHPLGTEF 936
            ++  DPH+ GLRGQR DW G DGGWY+ +   N  + +N+R+T+ LP  FP+RQL+T + +++ G H++++E+ +P         T+         +PCLANG LR+ VD ++          +P A     DG + ++S NLP+ECQ+FG   +W  + ++   M  G R L  ++       S+ +W+L  D  M AP WC KY+ E D     LA LQSDHA+ +I+ P V++R+N G+N +    L+ DGRV+P   FWQM V ++  D +  A++ G+LGETARPV DE  GQ VM G    RG +EDYRV   L   F
Sbjct:  110 AVCGDPHMQGLRGQRIDWSGVDGGWYSLIKDDNIDININVRLTAPLPDEFPDRQLMTSLAVLSKG-HSVVIEVENPY--------TVVTNGCPEGVSPCLANGGLRIIVDSQQVDELLRFSRHVPVA-----DGAMTVSSSNLPVECQQFGGDRIWARMYQD---MIEGRRELHGDE-------SLEEWILKYDHGMAAPGWCAKYIAEND-----LADLQSDHAIFKIQTPTVTVRLNAGVNYQGNGELNWDGRVLPDLEFWQMGVGMDGLDVDNPALS-GLLGETARPVYDEN-GQVVMEGFDAFRGTIEDYRVSDALDVHF 402          
BLAST of mRNA_D-herbacea_F_contig1149.1093.1 vs. uniprot
Match: D8LMW2_ECTSI (Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW2_ECTSI)

HSP 1 Score: 210 bits (535), Expect = 1.080e-62
Identity = 125/327 (38.23%), Postives = 191/327 (58.41%), Query Frame = 1
Query:   10 IFDDPHVTGLRGQRYDWYGEDGGWYAFLSTQN-QLQMNLRVTSHLPTAFPERQLVTGVGLVTTGGHTIIVEITDPLDLTPTCQDTINIANAESRATPCLANGALRVTVDGRE---------EMPGAGGYHFDGGIHITSVNLPLECQRFGDYPMW----EGLSEEQKLMHAGGRNLRAEDGMAGAVTSIFDWLLS-DSVMIAPPWCTKYLNELDGDVTALAGLQSDHAVLRIEAPNVSLRVNVGINSEQEQTLD-DGRVVPTASFWQMDVRVE--DAEGIAMAKGMLGETARPVRDEKTGQRVMTGLGVLRGEVEDYRVVHPLGTEF 936
            ++ DPH+ GLRGQR +W G DGGWY+ +   +  L +N+RVT+ LP  FP+RQL+T + +++ G +++++E+ +P         TI         +PCLANG LR+ VDG+E         +MP A     DG + +++ NLP+EC++FG + +W    + + E+++ +  G               S+ +W+L  D  M A  WC KY+ E D     LA LQ++HA+ +I+ P V++R+N G+N + +  L+ DGRV+P   FWQMDV ++  D +  A++ G+LGETARPV  E  G+ VM G    RG VEDYRV   LG  F
Sbjct:   12 MWGDPHMRGLRGQRINWSGVDGGWYSLVKDDHADLSINVRVTAPLPDEFPDRQLMTSLAIMSEG-YSVVIEVENPY--------TIVTGGCPEGVSPCLANGGLRIIVDGQEVDELLRFSRQMPVA-----DGTMTMSASNLPVECRQFGGHRIWARMYQDILEDRRQLRGG--------------ESLEEWILRYDQNMPARRWCAKYIAEND-----LADLQANHAIFKIQTPTVTVRLNAGVNYQGDGELNWDGRVLPDLEFWQMDVGIDGLDVDNPALS-GLLGETARPVYGEN-GEAVMEGSDAFRGTVEDYRVSSALGVHF 303          
BLAST of mRNA_D-herbacea_F_contig1149.1093.1 vs. uniprot
Match: A0A6H5JNZ2_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ2_9PHAE)

HSP 1 Score: 216 bits (550), Expect = 3.340e-61
Identity = 134/320 (41.88%), Postives = 184/320 (57.50%), Query Frame = 1
Query:    4 ASIFDDPHVTGLRGQRYDWYGEDGGWYAFLSTQNQ-LQMNLRVTSHLPTAFPERQLVTGVGLVTTGGHTIIVEITDPL--DLTPTCQDTINIANAESRATPCLANGALRVTVDGREEMP---GAGGYHFDGGIHITSVNLPLECQRFGDYPMWEGLSEEQKLMHAGGRNLRAEDGMAGAVTSIFDWLLSDSVMIAPPWCTKYLNELDGDVTALAGLQSDHAVLRIEAPNVSLRVNVGINSEQEQTLD-DGRVVPTASFWQMDVRVE--DAEGIAMAKGMLGETARPVRDEKTGQRVMTGLGVLRGEVEDYRVVHPLGTEF 936
            + I DDPH+ GL GQ  DW+G DG WY+F+   +  L++N+R+T+ LP  FP+RQLVTG+ +++ G H++++E+T+P   DL   C D           TPCLANG L VTVDG + +       G    GGI +++ NLP++C +FG + +W    E         R LRA+        S  DW+LS + M A  WCT+Y++E       L G+QS HA+ +I  P V +R+NVGI  +    +D DGRV+P    WQMDV +     E  A+  G+LGETARPV DE  G  VM G    RG  EDYRV  PLG +F
Sbjct:  399 SHICDDPHMKGLLGQSIDWFGVDGEWYSFVKDPDMDLRVNVRLTAPLPDDFPDRQLVTGLSVISEG-HSLVLEVTNPYSTDLNDGCPD--------GSPTPCLANGGLSVTVDGEKNVGLIHPIRGEILPGGIEVSADNLPVQCWQFGGHKIWARHYEAILAR----RKLRAQ--------SFEDWVLSFTDMAAHDWCTEYISE-----KGLTGVQSSHAIYQIVTPAVVVRLNVGIGHQDGDEVDWDGRVLPDLDVWQMDVGLTGLSLENEALT-GILGETARPVYDED-GHAVMAGDDAYRGTPEDYRVSGPLGMDF 690          
BLAST of mRNA_D-herbacea_F_contig1149.1093.1 vs. uniprot
Match: A0A6H5KYD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYD0_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 6.180e-59
Identity = 121/323 (37.46%), Postives = 173/323 (53.56%), Query Frame = 1
Query:   19 DPHVTGLRGQRYDWYGEDGGWYAFLSTQNQLQMNLRVTSHLPTAFPERQLVTGVGLVTTGGHTIIVEITDPLDLTPTCQDTINIANAESRATPCLANGALRVTVDGREE-----------MPGAGGYHFDGGIHITSVNLPLECQRFGDYPMWEGLSEEQKLMHAGGR-NLRAEDGMAGAVTSIFDWLLSDSVMIAPPWCTKYLNELDGDVTALAGLQSDHAVLRIEAPNVSLRVNVGINSEQEQTLDDGR--VVPTASFWQMDVRVEDAEGIAMAKGMLGETARPVRDEKTGQRVMTGLGVLRGEVEDYRVVHPLGTEFKQM 945
            D H+ GL GQ  DWYGED GWY  L   ++ Q+N RVT+ +P  FP RQLV+GV + +  G +++VE+ +P+        T       S + PCLA GALR+ VDG E            +PG       G + ++S NLP EC+ FG   +W   ++   +  A GR +LR         T   DW+L    M AP WC  +  E    ++ L+ +QS+ A+LR+E   V++RV+VG+N +      DG   +VP   FWQ D+  E+        GMLG+TAR V D+  G+ + +G+  LRG VE  RV  PLG +F+QM
Sbjct:   10 DSHMVGLLGQEIDWYGEDSGWYCLL-VNSEFQVNARVTAPMPDEFPTRQLVSGVSIRSAEGPSLVVEVKNPI--------TTETEGCSSTSAPCLAEGALRILVDGDESHALQSPVENLVLPG-------GDLVVSSANLPAECRPFGGDRIWA--AQFAAMNDASGRRSLRGH-------TPFADWVLEADTMAAPGWCALFAREQR--LSGLSSVQSNRAILRVETGGVTVRVDVGVNYQDSVLSSDGNAVLVPELDFWQTDIAFEELRPSGELGGMLGDTARYVIDDD-GKPITSGMEALRGPVETCRVSGPLGVDFEQM 304          
BLAST of mRNA_D-herbacea_F_contig1149.1093.1 vs. uniprot
Match: A0A6H5JW46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW46_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 8.380e-54
Identity = 116/313 (37.06%), Postives = 174/313 (55.59%), Query Frame = 1
Query:   19 DPHVTGLRGQRYDWYGEDGGWYAFLSTQNQLQMNLRVTSHLPTAFPERQLVTGVGLVTTGG----HTIIVEITDPLDLTPTCQDTINIANAESRATPCLANGALRVTVDGREEMPGAGGYHFDGGIHITSVNLPLECQRFGDYPMWEGLSEEQKLMHAG-GRNLRAEDGMAGAVTSIFDWLLSDSVMIAPPWCTKYLNELDGDVTALAGLQSDHAVLRIEAPNVSLRVNVGINSEQEQTLDDGRV--VPTASFWQMDVRVEDAEGIAMAKGMLGETARPVRDEKTGQRVMTGLGVLRGEVEDYRVVHPLGTEF 936
            DPH+TG  GQ++D+ GEDGG+YA +S    + MN+RVTS +P + PE   +TG+ L+TT      H+I++E+ +P D+   C          +  +PCLA+G+LRV ++G+EE+   G      G+ +T+VNLP EC+ FG    WE     +KL +A  GR+L  +        S+ DWLL D        C +Y+ + +G    L  LQS+HA  +I  P  ++R++ G    Q  T D      +P  + WQM++ ++  E    A G+LGET+ P +D   GQ +MTG+  +RG  EDYRV  PL   F
Sbjct:   90 DPHMTGFLGQKFDFTGEDGGYYALISDFPNMHMNMRVTSPVP-SLPEITYITGLSLLTTDANGEVHSIVIEVKNPHDIESACP---------AGVSPCLADGSLRVMLNGKEELSAPGSVALADGVIVTAVNLPGECRSFGFEHYWE----RKKLENARHGRHLGEQ--------SMGDWLLGDPTATNMDECMEYVAQAEGQAGGLFALQSEHASFQIVTPTATVRLSHG-RLHQIATRDPTNRFDLPDHTTWQMNMGIDHNEVSYSATGILGETSTPTKDAY-GQDIMTGMEAIRGSEEDYRVAGPLDVTF 378          
BLAST of mRNA_D-herbacea_F_contig1149.1093.1 vs. uniprot
Match: A0A6H5KRS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS2_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 5.650e-43
Identity = 102/307 (33.22%), Postives = 165/307 (53.75%), Query Frame = 1
Query:   19 DPHVTGLRGQRYDWYGEDGGWYAFLSTQNQLQMNLRVTSHLPTAFPERQLVTGVGLVTTGG----HTIIVEITDPLDLTPTCQDTINIANAESRATPCLANGALRVTVDGREEMPGAGGYHFDGGIHITSVNLPLECQRFGDYPMWEGLSEEQKLMHAGGRNLRAEDGMAGAVTSIFDWLLSDSVMIAPPWCTKYL--NELDGDVTALAGLQSDHAVLRIEAPNVSLRVNVGINSEQEQTLDDGRVVPTASFWQMDVRVE-DAEGIAMAKGMLGETARPVRDEKTGQRVMTGLGVLRGEVEDYRVVH 918
            DPH+TG  GQ++D+ G+DG WY  +S    + +N+RVT+ +P+  P+   +TG+ L+T  G    H++++ + DP  L  +C          +  TPCLANGAL V++DG+E +   G       + ++ VNLP  C+ FG    WE   ++ +   AGGR L ++D   G      DW+L D        CT+Y+  + ++G    L   +S+HA  +I  P  ++R++ G      Q    G  +P  S WQM++ ++ D+ G+  A+G+LGET  P RD   G+ VM G+  +RG  E+  + H
Sbjct:   57 DPHMTGFHGQKFDFTGDDGEWYCLISDLPSMNLNMRVTAPVPSR-PDITYITGISLITQDGNGLDHSVVITVKDPHSLESSCP---------AGVTPCLANGALSVSLDGKEALSAPGVVEMAPNMKVSVVNLPGACRSFGFEKYWE--RKKLEYAQAGGRRLSSKDQDMG------DWILGDPTATNMAECTEYVARHVVEGGDGGLFAHKSEHASFQIVMPIATVRLSHG---RLHQIAQYG--LPDHSTWQMNLAIDSDSVGVG-AQGVLGETLVPTRDAD-GEYVMHGMESIRGTQEECELAH 338          
BLAST of mRNA_D-herbacea_F_contig1149.1093.1 vs. uniprot
Match: A0A6H5KVF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF3_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 1.480e-41
Identity = 106/318 (33.33%), Postives = 165/318 (51.89%), Query Frame = 1
Query:   10 IFDDPHVTGLRGQRYDWYGEDGGWYAFLSTQNQLQMNLRVTSHLPTA-FPERQLVTGVGLVTTGG----HTIIVEITDPLDLTPTCQDTINIANAESRATPCLANGALRVTVDGREEMPGAGGYHFDGGIHITSVNLPLECQRFGDYPMWEGLSEEQKLMHA-GGRNLRAEDGMAGAVTSIFDWLLSDSVMIAPPWCTKYLNELDGDVTALAGLQSDHAVLRIEAPNVSLRVNVG-INSEQEQTLDDGRVVPTASFWQMDVRVEDAEGIAMAKGMLGETARPVRDEKTGQRVMTGLGVLRGEVEDYRVVHPLGTEFKQ 942
            I  DPH+TG  GQ++D+ GEDGGWY+ ++  N + +N+RVTS  P A  PE   +TG+ ++TT      H+I++E+ DP +L  +C          +  +PCL +GAL V +DG E +   G       + +++ NLP  C+ FG    WE     +KL +A  GR LR    M        +W+L D        C +Y+   + +   +   QS+H   +I  P  ++R++ G ++    +   D   +P    WQM++ +   +    AKG+LG+T  P RD   G+ +MTGL  +RG  EDYRV   LG +F Q
Sbjct:  316 ICGDPHMTGFLGQKFDFTGEDGGWYSVIADSN-MNVNMRVTS--PVADLPEITYITGLSVLTTDTDGLEHSIVIEVIDPHNLDSSCP---------AGVSPCLGDGALVVLLDGVESLFAPGTVALGADVEVSAANLPGACRSFGFEKYWE----RKKLENARAGRLLRTTPSMG-------EWILGDPTATNMNECVEYVARAEAEEGGVFAHQSEHVSFQIVTPKATVRLSHGRLHQIAMRDPTDRFDLPDHLTWQMNMAIHHEDVSHAAKGILGQTFVPTRDAD-GKPIMTGLEAIRGSEEDYRVDGALGVDFVQ 609          
BLAST of mRNA_D-herbacea_F_contig1149.1093.1 vs. uniprot
Match: A0A6H5L5Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Y7_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 1.840e-40
Identity = 102/316 (32.28%), Postives = 162/316 (51.27%), Query Frame = 1
Query:    7 SIFDDPHVTGLRGQRYDWYGEDGGWYAFLSTQNQLQMNLRVTSHLPT-----------AFPERQLVTGVGLVTTGG----HTIIVEITDPLDLTPTCQDTINIANAESRATPCLANGALRVTVDGREEMPGAGGYHFDGGIHITSVNLPLECQRFGDYPMWEGLSEEQKLMHA-GGRNLRAEDGMAGAVTSIFDWLLSDSVMIAPPWCTKYLNELDGDVTALAGLQSDHAVLRIEAPNVSLRVNVG-INSEQEQTLDDGRVVPTASFWQMDVRVEDAEGIAMAKGMLGETARPVRDEKTGQRVMTGLGVLRGEVED 903
            S+   PH+TG  GQ++D+ GEDGGWY+ ++  N + +N+RVTS   T           A+    L   + ++TT      H+I++E+ +P  L  +C          +  +PCLA+GALRV +DG E +   G      G+ I++VNLP  C+ FG    WE     +KL +A GGR LR +  M        +W+L D        C +Y+   + +   +   QS+HA  +I  P  ++R++ G ++    +   D   +P    WQM++ V+  +    AKG+LGET  P RD  +G+ +MTG+  +RG  ED
Sbjct:    6 SLSGGPHMTGFLGQKFDFTGEDGGWYSIIADSN-MNVNMRVTSPSSTCPRSPTSQRLGAYSSAVLERRLSVLTTDADGSDHSIVIEVAEPHSLDSSCP---------AGVSPCLADGALRVLLDGDEALFAHGTVSLGLGVEISAVNLPGACRSFGFEKYWE----HKKLEYATGGRQLRTQPSMG-------EWILGDPTATNMDECVEYVARAEAEEGGMFAHQSEHASFQIVTPAATVRLSHGRLHQIAMRDPTDQYDLPDHLTWQMNLAVDHNQVSYAAKGILGETFVPTRDA-SGKPIMTGMEAIRGTEED 299          
BLAST of mRNA_D-herbacea_F_contig1149.1093.1 vs. uniprot
Match: A0A6H5K7V7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7V7_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 6.280e-39
Identity = 105/319 (32.92%), Postives = 157/319 (49.22%), Query Frame = 1
Query:    4 ASIFDDPHVTGLRGQRYDWYGEDGGWYAFLSTQNQLQMNLRVTSHLPTAFPERQLVTGVGLVTTG----GHTIIVEITDPLDLTPTCQDTINIANAESRATPCLANGALRVTVDGREEMPGAGGYHFDGGIHITSVNLPLECQRFGDYPMWEGLSEEQKLMHAGGRNLRAEDGMAGAVTSIFDWLLSDSVMIAPPWCTKYLNELDGDVTALAGL---QSDHAVLRIEAPNVSLRVNVG-INSEQEQTLDDGRVVPTASFWQMDVRVEDAEGIAMAKGMLGETARPVRDEKTGQRVMTGLGVLRGEVEDYRVVHPLGTEF 936
            A    DPH+TG  GQ++D+ G+DG WYA +S    L++N+RVTS +P A PE   +TG+G+ T       H++++ +TDP  L   C           + + CLA+GAL V +DG   +   G      G+ I++VNLP  C+ FG    WE    E     A GR L  +  M      + DW+L D        CT+Y+  L   V   AGL    S+H   +I  P  ++R++ G ++    +   D   +P    WQM++  ++ +    A G+LGET +   D   G  +M G+  +RG  EDY V  PL   F
Sbjct:  135 AGACGDPHMTGFLGQKFDFVGQDGEWYAVVSDMPDLEVNMRVTSPVP-AEPEITYITGLGIKTRDIEGLDHSLVITVTDPHSLDSACP---------VQGSTCLADGALTVELDGDVALLSPGEAELGPGVAISAVNLPGACRSFGFEKYWERKKAEYV---ASGRRLNNDLQMQ----EMSDWILGDPTATNMAECTEYV--LGATVDGQAGLFEYDSEHTSFQIVTPKGTIRLSHGRLHQLAMRDPTDRFDIPDHLTWQMNLAFDNVDLAVDATGILGETQQHTLDAN-GNPIMEGMAAIRGSQEDYLVDGPLDNVF 433          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1149.1093.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7G544_ECTSI1.230e-12869.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JS96_9PHAE3.410e-6439.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMW2_ECTSI1.080e-6238.23Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5JNZ2_9PHAE3.340e-6141.88VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KYD0_9PHAE6.180e-5937.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JW46_9PHAE8.380e-5437.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRS2_9PHAE5.650e-4333.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVF3_9PHAE1.480e-4133.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5Y7_9PHAE1.840e-4032.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7V7_9PHAE6.280e-3932.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1149contigD-herbacea_F_contig1149:39968..40930 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size963
Cds size963
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927543.9770405-CDS-D-herbacea_F_contig1149:39967..409301622927543.9770405-CDS-D-herbacea_F_contig1149:39967..40930Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1149 39968..40930 +
1690790225.2187338-CDS-D-herbacea_F_contig1149:39967..409301690790225.2187338-CDS-D-herbacea_F_contig1149:39967..40930Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1149 39968..40930 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1149.1093.1prot_D-herbacea_F_contig1149.1093.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig1149 39968..40930 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig1149.1093.1

>prot_D-herbacea_F_contig1149.1093.1 ID=prot_D-herbacea_F_contig1149.1093.1|Name=mRNA_D-herbacea_F_contig1149.1093.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=321bp
PASIFDDPHVTGLRGQRYDWYGEDGGWYAFLSTQNQLQMNLRVTSHLPTA
FPERQLVTGVGLVTTGGHTIIVEITDPLDLTPTCQDTINIANAESRATPC
LANGALRVTVDGREEMPGAGGYHFDGGIHITSVNLPLECQRFGDYPMWEG
LSEEQKLMHAGGRNLRAEDGMAGAVTSIFDWLLSDSVMIAPPWCTKYLNE
LDGDVTALAGLQSDHAVLRIEAPNVSLRVNVGINSEQEQTLDDGRVVPTA
SFWQMDVRVEDAEGIAMAKGMLGETARPVRDEKTGQRVMTGLGVLRGEVE
DYRVVHPLGTEFKQMFVPEK*
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mRNA from alignment at D-herbacea_F_contig1149:39968..40930+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig1149.1093.1 ID=mRNA_D-herbacea_F_contig1149.1093.1|Name=mRNA_D-herbacea_F_contig1149.1093.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=963bp|location=Sequence derived from alignment at D-herbacea_F_contig1149:39968..40930+ (Desmarestia herbacea DmunF female)
CCTGCGTCTATATTCGACGACCCGCACGTAACTGGCCTCCGCGGCCAGCG CTACGACTGGTACGGCGAGGACGGCGGCTGGTACGCCTTCCTGTCGACCC AAAATCAGCTTCAGATGAACCTTCGCGTTACGTCCCACCTGCCCACGGCG TTTCCTGAACGCCAGCTGGTTACCGGCGTTGGATTGGTGACCACAGGTGG CCATACAATCATAGTGGAAATCACCGACCCGCTCGACCTCACACCCACTT GCCAGGACACCATCAATATCGCTAATGCCGAATCTAGGGCGACGCCTTGC CTAGCCAACGGTGCTCTCCGTGTAACCGTTGATGGGCGCGAGGAGATGCC GGGTGCGGGTGGGTACCACTTCGATGGCGGAATCCACATCACCTCCGTCA ACCTTCCCCTCGAGTGCCAGCGTTTCGGCGACTATCCCATGTGGGAGGGG CTTTCCGAGGAGCAGAAGCTCATGCATGCCGGTGGGCGCAACCTGCGGGC CGAAGACGGAATGGCTGGAGCGGTCACCTCCATCTTTGACTGGCTCCTGT CGGACTCCGTCATGATCGCCCCGCCGTGGTGCACCAAGTACCTCAACGAG CTCGACGGTGACGTTACTGCCCTTGCCGGGCTTCAGTCTGACCACGCCGT GCTTAGGATCGAGGCACCTAATGTATCTCTGCGTGTGAACGTCGGCATCA ACAGCGAACAAGAGCAGACCCTGGACGACGGACGCGTCGTTCCCACCGCC TCTTTCTGGCAAATGGACGTGCGCGTCGAGGATGCCGAGGGTATTGCGAT GGCCAAGGGTATGCTCGGTGAAACGGCCCGCCCCGTCCGCGACGAGAAGA CTGGCCAACGCGTGATGACGGGTCTTGGTGTGCTCCGTGGCGAAGTGGAG GACTACAGGGTGGTGCATCCACTCGGCACCGAGTTCAAGCAGATGTTCGT CCCTGAGAAGTGA
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Coding sequence (CDS) from alignment at D-herbacea_F_contig1149:39968..40930+

>mRNA_D-herbacea_F_contig1149.1093.1 ID=mRNA_D-herbacea_F_contig1149.1093.1|Name=mRNA_D-herbacea_F_contig1149.1093.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1926bp|location=Sequence derived from alignment at D-herbacea_F_contig1149:39968..40930+ (Desmarestia herbacea DmunF female)
CCTGCGTCTATATTCGACGACCCGCACGTAACTGGCCTCCGCGGCCAGCG
CTACGACTGGTACGGCGAGGACGGCGGCTGGTACGCCTTCCTGTCGACCC
AAAATCAGCTTCAGATGAACCTTCGCGTTACGTCCCACCTGCCCACGGCG
TTTCCTGAACGCCAGCTGGTTACCGGCGTTGGATTGGTGACCACAGGTGG
CCATACAATCATAGTGGAAATCACCGACCCGCTCGACCTCACACCCACTT
GCCAGGACACCATCAATATCGCTAATGCCGAATCTAGGGCGACGCCTTGC
CTAGCCAACGGTGCTCTCCGTGTAACCGTTGATGGGCGCGAGGAGATGCC
GGGTGCGGGTGGGTACCACTTCGATGGCGGAATCCACATCACCTCCGTCA
ACCTTCCCCTCGAGTGCCAGCGTTTCGGCGACTATCCCATGTGGGAGGGG
CTTTCCGAGGAGCAGAAGCTCATGCATGCCGGTGGGCGCAACCTGCGGGC
CGAAGACGGAATGGCTGGAGCGGTCACCTCCATCTTTGACTGGCTCCTGT
CGGACTCCGTCATGATCGCCCCGCCGTGGTGCACCAAGTACCTCAACGAG
CTCGACGGTGACGTTACTGCCCTTGCCGGGCTTCAGTCTGACCACGCCGT
GCTTAGGATCGAGGCACCTAATGTATCTCTGCGTGTGAACGTCGGCATCA
ACAGCGAACAAGAGCAGACCCTGGACGACGGACGCGTCGTTCCCACCGCC
TCTTTCTGGCAAATGGACGTGCGCGTCGAGGATGCCGAGGGTATTGCGAT
GGCCAAGGGTATGCTCGGTGAAACGGCCCGCCCCGTCCGCGACGAGAAGA
CTGGCCAACGCGTGATGACGGGTCTTGGTGTGCTCCGTGGCGAAGTGGAG
GACTACAGGGTGGTGCATCCACTCGGCACCGAGTTCAAGCAGATGTTCGT
CCCTGAGAAGTGACCTGCGTCTATATTCGACGACCCGCACGTAACTGGCC
TCCGCGGCCAGCGCTACGACTGGTACGGCGAGGACGGCGGCTGGTACGCC
TTCCTGTCGACCCAAAATCAGCTTCAGATGAACCTTCGCGTTACGTCCCA
CCTGCCCACGGCGTTTCCTGAACGCCAGCTGGTTACCGGCGTTGGATTGG
TGACCACAGGTGGCCATACAATCATAGTGGAAATCACCGACCCGCTCGAC
CTCACACCCACTTGCCAGGACACCATCAATATCGCTAATGCCGAATCTAG
GGCGACGCCTTGCCTAGCCAACGGTGCTCTCCGTGTAACCGTTGATGGGC
GCGAGGAGATGCCGGGTGCGGGTGGGTACCACTTCGATGGCGGAATCCAC
ATCACCTCCGTCAACCTTCCCCTCGAGTGCCAGCGTTTCGGCGACTATCC
CATGTGGGAGGGGCTTTCCGAGGAGCAGAAGCTCATGCATGCCGGTGGGC
GCAACCTGCGGGCCGAAGACGGAATGGCTGGAGCGGTCACCTCCATCTTT
GACTGGCTCCTGTCGGACTCCGTCATGATCGCCCCGCCGTGGTGCACCAA
GTACCTCAACGAGCTCGACGGTGACGTTACTGCCCTTGCCGGGCTTCAGT
CTGACCACGCCGTGCTTAGGATCGAGGCACCTAATGTATCTCTGCGTGTG
AACGTCGGCATCAACAGCGAACAAGAGCAGACCCTGGACGACGGACGCGT
CGTTCCCACCGCCTCTTTCTGGCAAATGGACGTGCGCGTCGAGGATGCCG
AGGGTATTGCGATGGCCAAGGGTATGCTCGGTGAAACGGCCCGCCCCGTC
CGCGACGAGAAGACTGGCCAACGCGTGATGACGGGTCTTGGTGTGCTCCG
TGGCGAAGTGGAGGACTACAGGGTGGTGCATCCACTCGGCACCGAGTTCA
AGCAGATGTTCGTCCCTGAGAAGTGA
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