mRNA_D-herbacea_F_contig1146.1090.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig1146.1090.1 vs. uniprot
Match: A0A6H5L390_9PHAE (BZIP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L390_9PHAE) HSP 1 Score: 168 bits (425), Expect = 1.200e-46 Identity = 90/118 (76.27%), Postives = 98/118 (83.05%), Query Frame = 3
Query: 63 ETEEYGSVGAVGG--EAWVDMWGSLVDVLEATEEQQAAMRSQARAIADLARDLEGTKGIVERLKLLLADRNQTLDGEMAEIQRILTPTQTAKFVLWVSKNKACVHMLNQLWDKLHGGD 410
+TE + +GG A VDMW SLV +LEAT EQQA M +QA AIADL RDLEGT+ IVERL+LLLADRNQTLDGEMA IQRILTPTQ+AKFVLWVSKNKACVHMLNQLWDKLHG D
Sbjct: 271 KTEAAVAAAGLGGAASAAVDMWTSLVVLLEATPEQQAVMHNQAGAIADLVRDLEGTEEIVERLRLLLADRNQTLDGEMAAIQRILTPTQSAKFVLWVSKNKACVHMLNQLWDKLHGVD 388
BLAST of mRNA_D-herbacea_F_contig1146.1090.1 vs. uniprot
Match: A0A3S7YS51_9STRA (Fructose-bisphosphatase n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A3S7YS51_9STRA) HSP 1 Score: 101 bits (252), Expect = 4.820e-21 Identity = 49/132 (37.12%), Postives = 77/132 (58.33%), Query Frame = 3
Query: 117 MWGSLVDVLEATEEQQAAMRSQARAIADLARDLEGTKGIVERLKLLLADRNQTLDGEMAEIQRILTPTQTAKFVLWVSKNKACVHMLNQLW----DKLHGGDAAASQGSR*RALPWPRTANISGFDGGTSYR 500
+W L + L+ T +QQA++ ++ + DL+ T G++ L+ L+ D+N +LD E+ E+Q+ILTPTQTAKF+LW+++N AC+HMLNQLW ++ GG N+ GF G +R
Sbjct: 674 LWSILSEELQVTPDQQASLLEHRGSVVAMDADLDVTAGMLRDLRALIDDKNSSLDQELQEVQKILTPTQTAKFILWITRNPACMHMLNQLWRAVYERSEGGGXXXXXXXXXXXXXXXXXXNLGGFSGHHQWR 805
BLAST of mRNA_D-herbacea_F_contig1146.1090.1 vs. uniprot
Match: A0A4D9D2R2_9STRA (BZIP domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2R2_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 3.510e-19 Identity = 42/91 (46.15%), Postives = 63/91 (69.23%), Query Frame = 3
Query: 117 MWGSLVDVLEATEEQQAAMRSQARAIADLARDLEGTKGIVERLKLLLADRNQTLDGEMAEIQRILTPTQTAKFVLWVSKNKACVHMLNQLW 389
+W L + L T EQQAA+ + I + D+ T ++ L+ L+ D+N +LD E+ E+Q+IL+PTQTAKF+LW+++N AC+HMLNQLW
Sbjct: 295 LWAVLSEELHVTREQQAALLQRRDNIVAMDADIGVTSAMLRELRALIEDKNSSLDQELLEVQKILSPTQTAKFILWITRNPACMHMLNQLW 385
BLAST of mRNA_D-herbacea_F_contig1146.1090.1 vs. uniprot
Match: A0A835YXR1_9STRA (BZIP domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXR1_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.010e-16 Identity = 50/115 (43.48%), Postives = 70/115 (60.87%), Query Frame = 3
Query: 117 MWGSLVDVLEATEEQQAAMRSQARAIAD-----------LARDLEGTKGIVERLKLLLADRNQTLDGEMAEIQRILTPTQ---------TAKFVLWVSKNKACVHMLNQLWDKLH 401
+W +LV VL+ T +Q+ + S+ AIA + DL T +V L+ LL +N++LD EMA+IQRIL+PT TAKF+LWVS+N AC+HMLNQLW ++H
Sbjct: 184 LWNTLVRVLQITPQQEELLASKV-AIAQXXXXXXXXXXAMDEDLHNTLQLVAGLRSLLCTKNESLDDEMAQIQRILSPTXXXXXXXXXXTAKFILWVSRNAACMHMLNQLWTQVH 297
BLAST of mRNA_D-herbacea_F_contig1146.1090.1 vs. uniprot
Match: A0A7S0AC89_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AC89_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 7.410e-16 Identity = 38/89 (42.70%), Postives = 56/89 (62.92%), Query Frame = 3
Query: 129 LVDVLEATEEQQAAMRSQARAIADLARDLEGTKGIVERLKLLLADRNQTLDGEMAEIQRILTPTQTAKFVLWVSKNKACVHMLNQLWDK 395
LV LE T+EQ A++ +L L + ++E L+L L + L+ EM ++ ILTPTQ AKF++WVS N AC+HMLN+LW++
Sbjct: 28 LVKYLEVTQEQAKALKDSRLIAQELDSALTESLSVLEELRLRLTQAGEDLEAEMDSVRAILTPTQAAKFLVWVSNNSACMHMLNELWNQ 116
BLAST of mRNA_D-herbacea_F_contig1146.1090.1 vs. uniprot
Match: A0A7S2CMB6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CMB6_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 1.060e-15 Identity = 36/96 (37.50%), Postives = 57/96 (59.38%), Query Frame = 3
Query: 114 DMWGSLVDVLEATEEQQAAMRSQARAIADLARDLEGTKGIVERLKLLLADRNQTLDGEMAEIQRILTPTQTAKFVLWVSKNKACVHMLNQLWDKLH 401
+ W V+ E+Q +R + + +L + +E L+LL+ ++N++L+ EM +LTPTQ AKF++W+ KN ACVH+LNQLWD H
Sbjct: 121 NFWEVFNKVVGMQEKQFMKLRDNQTLVRSMVEELNADQASLEELRLLVGEKNESLETEMNTFTHLLTPTQVAKFIVWIEKNPACVHLLNQLWDLTH 216
BLAST of mRNA_D-herbacea_F_contig1146.1090.1 vs. uniprot
Match: A0A7S2PBD8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PBD8_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.430e-15 Identity = 42/99 (42.42%), Postives = 62/99 (62.63%), Query Frame = 3
Query: 129 LVDVLEATEEQQAAMRSQARAIADLARDLEGTKGIVERLKLLLADRNQTLDGEMAEIQRILTPTQTAKFVLWVSKNKACVHMLNQLWDKLHGGDAAASQ 425
LV+ L+ EEQ AMR + +L LE + ++E LK+ L + L+ E+ + +ILTPTQ AKF++WVSKN AC+HMLN+LW K + ++ Q
Sbjct: 247 LVEYLQVNEEQAKAMRDSRKVAKELDSALEESLAMLEELKVRLTQCCEDLEAEIDAVSKILTPTQVAKFLVWVSKNGACMHMLNELWRKEYPKSESSEQ 345
BLAST of mRNA_D-herbacea_F_contig1146.1090.1 vs. uniprot
Match: A0A1Z5JPY7_FISSO (BZIP domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPY7_FISSO) HSP 1 Score: 83.6 bits (205), Expect = 5.760e-15 Identity = 40/92 (43.48%), Postives = 58/92 (63.04%), Query Frame = 3
Query: 129 LVDVLEATEEQQAAMRSQARAIADLARDLEGTKGIVERLKLLLADRNQTLDGEMAEIQRILTPTQTAKFVLWVSKNKACVHMLNQLWDKLHG 404
LV+ LE T EQ AA++ +L LE G++ L+ LA L+ E ++ ILTPTQ AKF++WV+ N AC+HMLN+LWD+++G
Sbjct: 340 LVNYLEVTPEQAAALKDSRYVAQELDGCLETALGVLGELRNRLAQTGDDLETEFDNVRSILTPTQAAKFLVWVANNSACMHMLNELWDRVYG 431
BLAST of mRNA_D-herbacea_F_contig1146.1090.1 vs. uniprot
Match: A0A6A3LMW2_9STRA (BZIP domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LMW2_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 1.420e-14 Identity = 37/87 (42.53%), Postives = 60/87 (68.97%), Query Frame = 3
Query: 129 LVDVLEATEEQQAAMRSQARAIADLARDLEGTKGIVERLKLLLADRNQTLDGEMAEIQRILTPTQTAKFVLWVSKNKACVHMLNQLW 389
L L TE+Q+ ++ Q +I+ + +L+ G++ LK + ++N TLD EM ++Q ILTPTQ AKF++WV+ N+AC+H+LN+LW
Sbjct: 347 LAKELGLTEDQKKKIQQQRGSISLICENLKSALGLLAELKTEVTNKNSTLDMEMEKLQNILTPTQRAKFIVWVTNNQACMHLLNKLW 433
BLAST of mRNA_D-herbacea_F_contig1146.1090.1 vs. uniprot
Match: A0A7S3QB84_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QB84_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 1.870e-14 Identity = 41/95 (43.16%), Postives = 59/95 (62.11%), Query Frame = 3
Query: 117 MWGSLVDVLEATEEQQAAMRSQARAIADLARDLEGTKGIVERLKLLLADRNQTLDGEMAEIQRILTPTQTAKFVLWVSKNKACVHMLNQLWDKLH 401
M+ LV+ L+ T Q AA++ +L LE + G++ LK L + Q LD E ++I++ILTP Q AKF++WVS N AC+HMLN+LW H
Sbjct: 548 MFHYLVEYLKVTPAQAAALKDSRHVAKELDEALEKSLGMLNELKDRLTNMGQDLDTEFSQIRKILTPRQAAKFLVWVSNNGACMHMLNELWQAEH 642 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1146.1090.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig1146.1090.1 >prot_D-herbacea_F_contig1146.1090.1 ID=prot_D-herbacea_F_contig1146.1090.1|Name=mRNA_D-herbacea_F_contig1146.1090.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=107bp MWGSLVDVLEATEEQQAAMRSQARAIADLARDLEGTKGIVERLKLLLADRback to top mRNA from alignment at D-herbacea_F_contig1146:63907..69230- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig1146.1090.1 ID=mRNA_D-herbacea_F_contig1146.1090.1|Name=mRNA_D-herbacea_F_contig1146.1090.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=5324bp|location=Sequence derived from alignment at D-herbacea_F_contig1146:63907..69230- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig1146:63907..69230- >mRNA_D-herbacea_F_contig1146.1090.1 ID=mRNA_D-herbacea_F_contig1146.1090.1|Name=mRNA_D-herbacea_F_contig1146.1090.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=642bp|location=Sequence derived from alignment at D-herbacea_F_contig1146:63907..69230- (Desmarestia herbacea DmunF female)back to top |