mRNA_D-herbacea_F_contig114.1081.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig114.1081.1 vs. uniprot
Match: D7G2T8_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T8_ECTSI) HSP 1 Score: 517 bits (1332), Expect = 2.150e-174 Identity = 301/587 (51.28%), Postives = 375/587 (63.88%), Query Frame = 3
Query: 123 IDVSAFISNYNDTDKALALFRLILASTFIVLGVYSLVQFYRSRWILDIRTRSARLVMLGGIAVTVSFLVAINDSLRIIWGSEYSLRWFWSSILLFFITPNLFGSYFCRALRLAVVFHPRAKRALPWLIPERNYMWVLFVFGLGMIAIPIRQEYTLEIWEVIPEQTDILSHMSLAFAGALMCLYPFIRKVDDLFNISKELIVVTVLLVILSVGQKLVYQYGGRMEIRWIGNHLTFIISATVFGVSVVDPLRRLAFDPLAASKRNYADRVLLSRREGHRNTGRGGCSGIHCSGMERYSHGEGSCTARTVSSGHSSRLPDSEDE-------------------------GRTARVEEGRAARPAGTVDVAGASGFEFYATTPWGNN---ANAANSAANHSNQQRRRAGAVVDG-----------------------VEVWDFERLARTPLLAAAFEDYSRKALCHESVLFLSEVSRYQNDDHSAPSGGPG--PTQYEAFCRISDTFIKAGAREEVNISDTDKKRIVMWSQKGQAWFDFEDEEERRLVFGQAYVEVRNMLEANLLRRFLQTDQFKNVRAQREHVTAMMDSP 1724
D S +YN TDKALAL RL L FIVLG Y+LV+FYRSRWILDIRTRSA LV L G+++ +S LV +N + I+W S L WFW S+LLFF++P LFGSY CRALRLAVVF+PRAK ALPWLIPERNY+ VL + +G++AIPI EYTLE+W+ IP+QT IL + A L+C+YPFIR VDDLFNIS ELI VTV +V++++ Q++V ++GG E RW+ ++++ + A +F +S+V PLRRLA DPLAA+KRNYADRVLLSR E H G S ER +G SSR+ D D+ G T +V A +G + + A T G AN + S S +R AV G +EVWDFERL RTPLLAAAFEDYS++ALCHESVLFLSEVSRYQNDD++ P+ G PTQ+ FC I+DTFIKAGA EEVNISD D+K I+ QKG+ F+ +EEERR+VF ++Y+EV++MLEANLLRRFL TDQFK+VR QRE+V AMMDSP
Sbjct: 47 FDPSDLFPSYNRTDKALALVRLGLGCCFIVLGTYALVRFYRSRWILDIRTRSAHLVTLQGVSLLLSMLVTVNGATTIVWDS--GLDWFWISLLLFFVSPALFGSYICRALRLAVVFNPRAKSALPWLIPERNYLAVLLLASIGILAIPIYHEYTLEVWDAIPKQTSILKAQARVLAVMLVCIYPFIRNVDDLFNISTELITVTVTIVVVTIVQEVVDKWGGNFEQRWLTSNISVVFVAVLFCISIVAPLRRLALDPLAATKRNYADRVLLSRTESHSTRSASGIS------PER--------------AGRSSRIVDDSDDEVAFEDEELGGVPGMDTTAAAGVGGGSTGKVATSSAVVGSGVITTSTADANVVAPRTWKGREMTIANGSTSVPKGSGSTGKRRDAVQRGQRGRGXXXXXXXXXXXXPSDREEMEVWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATPTNAAGTCPTQFGTFCYITDTFIKAGAPEEVNISDKDRKLILELYQKGEESFEEVNEEERRMVFKRSYLEVKSMLEANLLRRFLNTDQFKSVRKQRENVQAMMDSP 611
BLAST of mRNA_D-herbacea_F_contig114.1081.1 vs. uniprot
Match: D7G2T7_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2T7_ECTSI) HSP 1 Score: 469 bits (1206), Expect = 1.080e-156 Identity = 277/520 (53.27%), Postives = 346/520 (66.54%), Query Frame = 3
Query: 273 RSARLVMLGGIAVTVSFLVAINDSLRIIWGSEYSLRWFWSSILLFFITPNLFGSYFCRALRLAVVFHPRAKRALPWLIPERNYMWVLFVFGLGMIAIPIRQEYTLEIWEVIPEQTDILSHMSLAFAGALMCLYPFIRKVDDLFNISKELIVVTVLLVILSVGQKLVYQYGGRMEIRWIGNHLTFIISATVFGVSVVDPLRRLAFDPLAASKRNYADRVLLSRR--EGHRNTGRGGCSG-------IHCSGMERYSHGEGSCTA-----RTVSSGHSSRLPDSEDEGR------TARVEEGRAA------RPAGTVDVAGASGFEFYATTPWGNNANAANSAANHSNQQR-RRAGAVVDG------VEVWDFERLARTPLLAAAFEDYSRKALCHESVLFLSEVSRYQNDDHSAPSGGP---GPTQYEAFCRISDTFIKAGAREEVNISDTDKKRIVMWSQKGQAWFDFEDEEERRLVFGQAYVEVRNMLEANLLRRFLQTDQFKNVRAQREHVTAMMDSP 1724
RSA LVM+ G+ V ++ +VA+N S+ ++W S L WFW S+LLFFI+P L GSY CRALRLAVVFHPRAKRALPWLIPERNYM VL V +GM+AIPI QEYTLE+WE+IP+QT IL+ +L FA L C+YPFIR VDDLFNISKEL++VTV +V L+V QK ++GG E RW+GN+++ I+A +FG+S+VDPLRRLA DPLAA+KRNYADRVLLSR + T G SG I + E EG T ++G S + S G TA + AA P T S T+ GN + R RR G G +EVW+FERLARTPLLA AFEDYS++ALCHESVLFL+EVSRYQ++D++ P+ P+Q+ FC I++TFIKAG+ EEVNISD DKKRI+ QKG+ F+ +EEERRL+FG+AY+EV++MLEANLLRRFL TD+FK+VR QRE+V MMDSP
Sbjct: 3 RSAHLVMVEGVCVLLTMVVAVNGSINVVWDS--GLDWFWMSLLLFFISPALKGSYICRALRLAVVFHPRAKRALPWLIPERNYMVVLLVVSVGMMAIPIYQEYTLEVWEIIPKQTTILTTEALVFAVTLACIYPFIRNVDDLFNISKELLLVTVAIVCLAVVQKAAAEWGGVYEQRWVGNNISIFIAAVLFGISIVDPLRRLAMDPLAATKRNYADRVLLSRTAPDSTVRTASGVSSGRSRDPSRIRANSEEEARLEEGDLGGVLDKDETTTAGDVSNVVASAVVGNGVITTSTADTNDAVAAGTWNEREPINTSVFTKQSSSVSNDTSIGGNRRDVVQRGPRERAFFRGRRGGGGGRGRPEREEMEVWNFERLARTPLLAVAFEDYSKRALCHESVLFLTEVSRYQHEDYATPTKDAIRSSPSQFGTFCYITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEERRLIFGRAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQTMMDSP 520
BLAST of mRNA_D-herbacea_F_contig114.1081.1 vs. uniprot
Match: A0A6H5JE98_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE98_9PHAE) HSP 1 Score: 471 bits (1212), Expect = 1.990e-156 Identity = 276/571 (48.34%), Postives = 360/571 (63.05%), Query Frame = 3
Query: 123 IDVSAFISNYNDTDKALALFRLILASTFIVLGVYSLVQFYRSRWILDIRTRSARLVMLGGIAVTVSFLVAINDSLRIIWGSEYSLRWFWSSILLFFITPNLFGSYFCRALRLAVVFHPRAKRALPWLIPERNYMWVLFVFGLGMIAIPIRQEYTLEIWEVIPEQTDILSHMSLAFAGALMCLYPFIRKVDDLFNISKELIVVTVLLVILSVGQKLVYQYGGRMEIRWIGNHLTFIISATVFGVSVVDPLRRLAFDPLAASKRNYADRVLLSRREGHRNTGR--GGCSGIHCSGMERYSHGEGSCTARTVSSGHS--SRLPDSEDEGRTAR-VEEGRAARPAGTVDVAGASGF--------------EFYATTPW---------GNNANAANSAANHSNQQR-----RRAGAVVDGVEVWDFERLARTPLLAAAFEDYSRKALCHESVLFLSEVSRYQNDDHS----APSGGPGPTQYEAFCRISDTFIKAGAREEVNISDTDKKRIVMWSQKGQAWFDFEDEEERRLVFGQAYVEVRNMLEANLLRRFLQTDQFKNVRAQREHVTAMMDSP 1724
+++S+ +Y TDKALAL RL + FIVLG +LV+FYRS+WILDIRTRSA LVM+GG+A ++ LV +NDS ++W + WFW S+LLFFI+P LFGSY CRALRLAVVFHPR KRALPWLIPE NYM VL V +GM+AIPI EYTL +W+ I +QT+IL + A AL C+YPFIR VDDLF+IS ELI+VT +V+++ +++ Q+ G E RW N+++ + +FGVS++ PLRRLA DPLAA++ NYA+RVL +R E H R G SG+ C S E T G + + + +E EG +A V A T A A+G T W GN + + R RR+ + +++WDFER+ RTPLLA AFEDYS+KALCHES LFLSEVSRYQN D++ A SG PTQ+ FC I+DTFIKAG+ EEVNISD ++K I+ KG+ F+ +EEERR++F +AY+ V+ MLEANLL RFL TD+FK+V Q+E M+DSP
Sbjct: 36 LNLSSLAPSYTRTDKALALVRLGVGCCFIVLGTCALVRFYRSKWILDIRTRSAYLVMVGGVAGILTMLVTVNDSTTVVW--DIGFDWFWISLLLFFISPALFGSYICRALRLAVVFHPRVKRALPWLIPEHNYMVVLLVASVGMLAIPIYHEYTLGVWDAISKQTNILKIEARVLAVALACIYPFIRNVDDLFSISTELIIVTATIVLIT-SEEVDGQWWGPYERRWFANNMSVVFMIILFGVSIIAPLRRLASDPLAATRHNYANRVLPNRTEPHSTARRASGFSSGLDCESSMMCSEREDETTLEEGKLGEALATGITTTEREGGSAGYVAASATIGKAVTTSSADANGAVAPHTWTDREPTNSSVVTTATWFVSNDNGAGGNRLDGVRRGQSEIGLDRGRDGGRRSRSHKQDIDIWDFERIVRTPLLAVAFEDYSKKALCHESFLFLSEVSRYQNGDYAMATRASSGSSCPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEELFEDVNEEERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSVEMQKEDTQVMVDSP 603
BLAST of mRNA_D-herbacea_F_contig114.1081.1 vs. uniprot
Match: D7FTW0_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW0_ECTSI) HSP 1 Score: 454 bits (1167), Expect = 4.090e-151 Identity = 264/575 (45.91%), Postives = 348/575 (60.52%), Query Frame = 3
Query: 21 GDGTPGSSSGSDELTYWEEKYGVTGSSSGGPPPSIDVSAFISNYNDTDKALALFRLILASTFIVLGVYSLVQFYRSRWILDIRTRSARLVMLGGIAVTVSFLVAINDSLRIIWGSEYSLRWFWSSILLFFITPNLFGSYFCRALRLAVVFHPRAKRALPWLIPERNYMWVLFVFGLGMIAIPIRQEYTLEIWEVIPEQTDILSHMSLAFAGALMCLYPFIRKVDDLFNISKELIVVTVLLVILSVGQKLVYQYGGRMEIRWIGNHLTFIISATVFGVSVVDPLRRLAFDPLAASKRNYADRVLLSRREGHRNTGRGGCSGIHCSGMERYSHGEGSCTARTVSSGHSSRLPDSEDEGRTARVEEGRAARPAGTVDVAGASGFEFYATTPWGNNANAANSAANHSNQQRRRAGAVVDGVEVWDFERLARTPLLAAAFEDYSRKALCHESVLFLSEVSRYQNDDHS----APSGGPGPTQYEAFCRISDTFIKAGAREEVNISDTDKKRIVMWSQKGQAWFDFEDEEERRLVFGQAYVEVRNMLEANLLRRFLQTDQFKNVRAQREHVTAMMDSPDKS 1733
G G PG+S T WE+ YG +D+S+ + +Y TDKALALFRL + FIVLG +L +FYR + ILDIRTRSA LVM+GG+A ++ LV +ND+ +IW + + WFW+S+ LFFI+P LFG Y CRALRLAVVFHPR KRALPWLIPERNYM VL V +GM+AIPI E+TL +W+ I +QT IL + A AL C+YPFIR VDDLF+IS ELI+VT + ++++ Q++ +GG E RW+ N+L+ + +FGVS+V PLRRLA DP AA++RNYA+RVL E H G V G S R +D GR RR+ + +++WDFER+ RTPLLA AFEDYS++ALCHES LFLSEVSRYQN D++ A SG PTQ+ FC I+DTFIKAG+ EEVNISD ++K I+ KG+ F+ ++ ERR++F +AY+ V+ MLEANLL RFL TD+FK++ Q+E+ M+DSP ++
Sbjct: 15 GTGGPGTS------TSWEQHYGDG-------DIDLDLSSLVPSYTRTDKALALFRLGVGCCFIVLGTCALARFYRLKQILDIRTRSAYLVMVGGVAGILTMLVTVNDATTVIWDTGFD--WFWTSLFLFFISPALFGRYICRALRLAVVFHPRVKRALPWLIPERNYMVVLLVASVGMLAIPIYHEHTLGVWDAISKQTTILKIEARVLAVALACIYPFIRNVDDLFSISTELIIVTATIGLITIVQEIDGLWGGCYERRWLANNLSVLFMIVLFGVSIVAPLRRLASDPFAATRRNYANRVLPDHTE---------------------PHSIGGNRLDAVRRGQSER---GDDRGRDGG-----------------------------------------------RRSRSHKQDIDLWDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRYQNGDYATTIRASSGSSFPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEELFEDVNDAERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSLEMQKENTQVMVDSPPQA 503
BLAST of mRNA_D-herbacea_F_contig114.1081.1 vs. uniprot
Match: A0A6H5LEP9_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEP9_9PHAE) HSP 1 Score: 416 bits (1070), Expect = 5.480e-136 Identity = 260/546 (47.62%), Postives = 320/546 (58.61%), Query Frame = 3
Query: 273 RSARLVMLGGIAVTVSFLVAINDSLRIIWGSEYSLRWFWSSILLFFITPNLFGSYFCRALRLAVVFHPRAKRALPWLIPERNYMWVLFVFGLGMIAIPIRQEYTLEIWEVIPEQTDILSHMSLAFAGALMCLYPFIRKVDDLFNISKELIVVTVLLVILSVGQKLVYQYGGRMEIRWIGNHLTFIISATVFGVS--------VVDPLRRLAFDPLAASKRNYADRVLLSRREGHRNTGRGGCSGIHCSGMERYSHGEGSCTARTVSSGHSSRLPDSEDE------------------------GRTARVEEGRAARPAGTVDVAGASGFEFYATTPWGNN----ANAANSAANHSNQQRRRAGAVVDG-----------------------VEVWDFERLARTPLLAAAFEDYSRKALCHESVLFLSEVSRYQNDDHSAPSG---GPGPTQYEAFCRISDTFIKAGAREEVNISDTDKKRIVMWSQKGQAWFDFEDEEERRLVFGQAYVEVRNMLEANLLRRFLQTDQFKNVRAQREHVTAMMDSP 1724
RSA LV L G+++ S LV +ND+ I+W S L WFW S+LLFF++P LFGSY CRALRLAVVF+PRAKRALPWLIPERNY+ VL + +G++AIPI QEYTLE+W+ IP+QT IL + A L+C+YPFIR VDDLFNISKELI VTV + +++ +E + H+ + +S VV PLRRLA DPLAA+KRNYADRVLLSR E H G S G R + DSEDE G T +V A +G + + A A PW AN + S S+ +R AV G +EVWDFERL RTPLLAAAFEDYS++ALCHESVLFLSEVSRYQNDD++ P+ G PTQ+ FC I+DTFIKAGA EEVNI +K I+ QKG+ F+ +EEERR+VF ++Y+ V++MLEANLLRRFL TDQFK+VR QRE+V AMMDSP
Sbjct: 19 RSAHLVTLQGVSLLFSMLVTVNDATTIVWDS--GLDWFWISLLLFFVSPALFGSYICRALRLAVVFNPRAKRALPWLIPERNYLAVLLLASIGILAIPIYQEYTLEVWDAIPKQTSILKTQARVLAVMLVCIYPFIRNVDDLFNISKELITVTVTIAVVTCEAHSFVHRSTHVE-SCLQQHVPPTTKRFPYPMSPSNLSTRSVVAPLRRLALDPLAATKRNYADRVLLSRTESHSTRSASGISPERAGGSSRI-------------------VDDSEDEVAFEDEELGGVPGFDTTAAAGVGGGSTGKVATS-AVVGSGVITTSSADANGAVAPCPWKGRELTIANGSTSVPKGSSSTGKRRDAVQRGQRGRGXXXXXXXXXXXXXSDREEMEVWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATPTNAAAGTCPTQFGTFCFITDTFIKAGAPEEVNI----RKLILELYQKGEESFEEVNEEERRMVFKRSYLAVKSMLEANLLRRFLNTDQFKSVRKQRENVQAMMDSP 537
BLAST of mRNA_D-herbacea_F_contig114.1081.1 vs. uniprot
Match: A0A6H5L7K1_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7K1_9PHAE) HSP 1 Score: 353 bits (905), Expect = 3.280e-112 Identity = 215/501 (42.91%), Postives = 288/501 (57.49%), Query Frame = 3
Query: 294 LGGIAVTVSFLVAINDSLRIIWGSEYSLRWFWSSILLFFITPNLFGSYFCRALRLAVVFHPRAKRALPWLIPERNYMWVLFVFGLGMIAIPIRQEYTLEIWEVIPEQTDILSHMSLAFAGALMCLYPFIRKVDDLFNISKELIVVTVLLVILSVGQKLVYQYGGRMEIRWIGNHLTFIISATVFGVSVVDPLRRLAFDPLAASKRNYADRVLLSRREGHRNTG----------RGGCSGIHCSG--MERYSHGEGSCTARTVSSGHSSRLPDSEDEG--------------------RTARVEEGRAAR--PAGTVDVAGASGFEFYATTPWGNNANAANSAANHSNQQRRRAGAVVDGVEVWDFERLARTPLLAAAFEDYSRKALCHESVLFLSEVSRYQNDDHSAPSGGPGPTQYEAFCRISDTFIKAGAREEVNISDTDKKRIVMWSQKGQAWFDFEDEEERRLVFGQAYVEVRNMLEANLLRRFLQTDQFKNVRAQR 1694
+ G ++ VS++ A+N SL I+WG+ YSL WFW S+LLF + P +FGSY CRALRLAV+FHPRAK+ALPWLIPERN+++ L + + +PI Q+ TLE+W KVDDLFNIS+ELI+VT+L +IL++G K Y M W G +L F I+A VFGVSVV PLR LA DPLA SK+ DR +L+RR+ RG + + +E +G+G + +++D+G T+ +E A P+ + GA +++ + A + VE WDFERLAR PL+AAAFE Y+RKALCHE VLFL EVSRYQ+ D P+G GP+QY+AFCRI+D FI+ G+REEV+IS ++KR++ + KG F+ EEERRLVF +AY+EV+ MLE NLLRRFLQTD+FK+VRAQR
Sbjct: 1 MAGSSMVVSYVAAVNQSLFILWGATYSLDWFWISLLLFSVLPLVFGSYICRALRLAVIFHPRAKQALPWLIPERNHLFFLSATVVAFLIVPIYQDMTLEVW-----------------------------KVDDLFNISRELIIVTILFLILAIGIKCGLYYEVDM---WTGGNLNFFITAAVFGVSVVGPLRLLAVDPLAGSKQRCMDRAVLARRDTRSEDVSYSAKATADIRGSSRAVRVASRKLEEGLYGDG--------------VDENDDDGCDTTPXXXXXXXXXXXXXXXATSLYDEPPPANLSPSPSPGDPGAGNWQYQGINFCTSRGGGAGXXXXXXXXXXXXXXXXEEMVEAWDFERLARKPLVAAAFEAYTRKALCHECVLFLREVSRYQSGDFPEPAGLSGPSQYQAFCRINDVFIRPGSREEVSISGVERKRLMELAHKGDVLFEAGTEEERRLVFARAYLEVKTMLEDNLLRRFLQTDRFKSVRAQR 455
BLAST of mRNA_D-herbacea_F_contig114.1081.1 vs. uniprot
Match: D7FTW1_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW1_ECTSI) HSP 1 Score: 336 bits (861), Expect = 1.050e-105 Identity = 228/529 (43.10%), Postives = 301/529 (56.90%), Query Frame = 3
Query: 273 RSARLVMLGGIAVTVSFLVAINDSLRIIWGSEYSLRWFWSSILLFFITPNLFGSYFCRALRLAVVFHPRAKRALPWLIP----ERNYMWVLFVFGLGMIAIPIRQEYTLEIWEVIPEQTDILSHMSLAFAGALMCLYPFIRKVDDLFNISKELIVVTVLLVILSVGQKLVYQYGGRMEIRWIGNHLTFIISATVFGVSVVDPLRRLAFDPLAASKRNYADRVLLSRREGHRNTGRG-GCSGIHCSGMERYSHGEGSCTARTVSSGHSSRLP------------DSEDEGRTARVEEGRAARPAGTVDVAGA-SGFEFYATTPWGNNANA-ANSAANHSNQQRRRAGAVV----------------------DGVEVWDFERLARTPLLAAAFEDYSRKALCHESVLFLSEVSRYQNDDHSAP---SGGPGPT-QYEAFCRISDTFIKAGAREEVNISDTDKKRIVMWSQKGQAWFDFEDEEERRLVFGQAYVEVRNMLEANLLRRFLQTDQFKNVRAQREHVTAMMDSP 1724
RSA LVM+ G+ ++ LV +N S+ ++W + L +FW S+LLF + P L GSY CR LRLAVVFHPRAKRALPWLIP + Y P+ D LS AFA AL C +PFIR VDDLF+ISKE+I+VT +VIL++ Q +V ++GG E RWI ++ + A +FGVS+VDPLRRLAFDPLAA++ N+A+R+LLSR E H + R G S + G +R + G+ AR + G +P D+ D +A + GR A A T D GA + + P ++ A +S+ ++ N R R GA + +EVWDFER+A TPLLAAAFEDYS++ALCHESVLFLSEVSRYQN+++ P S P Q+ +FC I+DTFIKAG+ EEVNI R++F +AY +V+NMLEANL+ RFL TD+FKNVR QRE++ AMM SP
Sbjct: 3 RSAYLVMVEGVCALLTMLVTLNSSINVVW--DCGLDYFWVSLLLFLVVPTLLGSYICRVLRLAVVFHPRAKRALPWLIPGGRSDAGYY---------------------------PD--DDLS----AFAVALACTFPFIRNVDDLFSISKEIIIVTAAVVILAIEQNVVDKWGGVYERRWIDKSVSILFVAVLFGVSIVDPLRRLAFDPLAATQHNHANRILLSRTEPHNSVRRELGFSSVIGGGSQR-TRGDSEEEAR-LEEGQREGVPGKDTTTAAGGDGDTGDVPTSAAI--GRGATTAPTADADGAVAPCTWNEREPTNSSVVAEGSSSVSNDNSTRGRRGAFQRVQRARGSGRDRGCSSRSRSDREEMEVWDFERIASTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNNNYPMPTRASSASSPRIQFGSFCYITDTFIKAGSSEEVNI---------------------------RMIFSRAYRDVKNMLEANLVLRFLNTDRFKNVRVQRENMKAMMGSP 465
BLAST of mRNA_D-herbacea_F_contig114.1081.1 vs. uniprot
Match: D7FTW2_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW2_ECTSI) HSP 1 Score: 330 bits (847), Expect = 5.200e-105 Identity = 205/485 (42.27%), Postives = 268/485 (55.26%), Query Frame = 3
Query: 291 MLGGIAVTVSFLVAINDSLRIIWGSEYSLRWFWSSILLFFITPNLFGSYFCRALRLAVVFHPRAKRALPWLIPERNYMWVLFVFGLGMIAIPIRQEYTLEIWEVIPEQTDILSHMSLAFAGALMCLYPFIRKVDDLFNISKELIVVTVLLVILSVGQKLVYQYGGRMEIRWIGNHLTFIISATVFGVSVVDPLRRLAFDPLAASKRNYADRVLLSRREGHRNTGRGGCSGIHCSGMERYSHGEGSCTARTVSSGHSSRLPDSEDEGRTARVEEGRAARPAGTVDVAGASGFEFYATTPWGNNANAANSAANHSNQQRRRAGAVVDGVEVWDFERLARTPLLAAAFEDYSRKALCHESVLFLSEVSRYQNDDHS----APSGGPGPTQYEAFCRISDTFIKAGAREEVNISDTDKKRIVMWSQKGQAWFDFEDEEERRLVFGQAYVEVRNMLEANLLRRFLQTDQFKNVRAQREHVTAMMDSPDKS 1733
M+GG+A ++ LV +ND+ +IW + + WFW+S+LLFFI+P LFGSY CRALRLAVVFHPR KRALPWL+PERNYM VL V +GM+AIPI E+TL +W+ I +QT IL + A AL C+YPFIR VDDLF+IS ELI+VT ++G +I+ T +RNYA+RVL E H G +RL D R + E G D G G RR+ + +++WDFER+ RTPLLA AFEDYS++ALCHES LFLSEVSRYQN D++ A SG PTQ+ FC I+DTFIKAG+ EEVNISD ++K I+ KG+ F+ + EERR++F +AY+ V+ MLEANLL RFL TD+FK++ Q+E+ M+DSP ++
Sbjct: 1 MVGGVAGILTMLVTVNDATTVIWDTGFD--WFWTSLLLFFISPALFGSYICRALRLAVVFHPRVKRALPWLVPERNYMVVLLVSSVGMLAIPIYHEHTLGVWDAISKQTTILKIEARVLAVALACIYPFIRNVDDLFSISTELIIVTA-----TIG----------------------LITTT---------------------RRNYANRVLPDHTEPHSIGG--------------------------------NRL----DAVRRGQTERG---------DDRGRDGG--------------------------RRSRSHKQDIDLWDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRYQNGDYATTKRASSGSSFPTQFGTFCYITDTFIKAGSHEEVNISDKERKLILALYHKGEELFEDVNVEERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSLEMQKENTQVMVDSPPQA 364
BLAST of mRNA_D-herbacea_F_contig114.1081.1 vs. uniprot
Match: D8LJQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ7_ECTSI) HSP 1 Score: 283 bits (723), Expect = 1.050e-88 Identity = 138/205 (67.32%), Postives = 166/205 (80.98%), Query Frame = 3
Query: 324 LVAINDSLRIIWGSEYSLRWFWSSILLFFITPNLFGSYFCRALRLAVVFHPRAKRALPWLIPERNYMWVLFVFGLGMIAIPIRQEYTLEIWEVIPEQTDILSHMSLAFAGALMCLYPFIRKVDDLFNISKELIVVTVLLVILSVGQKLVYQYGGRMEIRWIGNHLTFIISATVFGVSVVDPLRRLAFDPLAASKRNYADRVLLSR 938
L A+N ++ I+W S L WFW S+LLFF++P LFGSY CRALRLAVVFHP+AKRALPWLIPERNY+ VL V GM+AIP+ EYTLE+WE+IP+QTDIL +S+AFA C+YPFIR VDDLF+ISKEL +VT +++L+VGQKL YGG E RW+GN+L + +A VF VSVVDPLRRLAFDPLAA+KRNYADRVLLSR
Sbjct: 2 LAAVNGAINIVWDS--GLDWFWVSLLLFFVSPALFGSYICRALRLAVVFHPKAKRALPWLIPERNYVAVLMVASCGMLAIPLYHEYTLEVWEIIPKQTDILIWVSIAFAVVQACIYPFIRNVDDLFSISKELAIVTAAVILLAVGQKLEGDYGGVYERRWLGNNLFLLFAAVVFSVSVVDPLRRLAFDPLAATKRNYADRVLLSR 204
BLAST of mRNA_D-herbacea_F_contig114.1081.1 vs. uniprot
Match: A0A6H5LA03_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA03_9PHAE) HSP 1 Score: 269 bits (688), Expect = 2.610e-78 Identity = 213/582 (36.60%), Postives = 256/582 (43.99%), Query Frame = 3
Query: 273 RSARLVMLGGIAVTVSFLVAINDSLRIIWGSEYSLRWFWSSILLFFITPNLFGSYFCRALRLAVVFHPRAKRALPWLIPERNYMWVLFVFGLGMIAIPIRQEYTLEIWEVIPEQTDILSHMSLAFAGALMCLYPFIRKVDDLFNISKELIVVTVLLVILS----------------------------------------------------------------------------VGQKLVYQYGGRMEIRWIGNHLTFIISATVFGVSVVDPLRRLAFDPLAASKRNYADRVLLSRREGHRNTGRGGCSGIHCSGMERYSHGEGSCTARTVSSGHSSRLPDSEDEGRTARV--EEGRAARPAGTVDVAG-----ASGFEFYATTPWGNNANAA------NSAANHSNQQRRRAGAVVDG-----VEVWDFERLARTPLLAAAFEDYSRKALCHESVLFLSEVSRYQNDDHS----APSGGPGPTQYEAFCRISDTFIKAGAREEVNISDTDKKRIVMWSQKGQAWFDFEDEEERRLVFGQAYVEVRNMLEANLLRRFLQTDQFKNVRAQREHVTAMMDSP 1724
RSA L MLGG+AV + L A+N +L I+W S L WFW S+LLFF++P LFGS CRALRLAVVFH RAKRALPWLIP TDIL S+AFA C+YPFIR VDDLF+ISKEL +VT ++L+ VGQKL GG E RW+GN+L +A VF V D R G +N + +P +D G A ++G A G A A G ++ G N A NS H +EVW FERLARTPLLA AFEDYS++ALCHESVLFLSEVS YQNDD++ A SG PTQ+ C I+DTF KAG+ EEVN SD DKK I FE++ F AY++V++MLEANLLRRFL TD+FK+VR QRE+V AMMDSP
Sbjct: 133 RSAHLAMLGGVAVILWMLTAVNGALNIVWDS--GLDWFWISLLLFFVSPALFGSCICRALRLAVVFHSRAKRALPWLIP-----------------------------------TDILIWESIAFAVVQACIYPFIRNVDDLFSISKELAIVTAATILLAGGPRMPDSAAALAPLDEYQYPAVGASSRASALTSRFARTPTTLHPSVLNPPPPVGTPSPPSPLHAALVLDALAAPPVGQKLEGDCGGVNERRWLGNNLFLFFAAVVFSVEC-------GIDDXXXXXXXXMLEEGAPRGNGRKNP---------------------------------AIVPADDDTGMAAVTGDDDGATAAXXGXXXXAAPARGLARGISSLSSHSTGGNRRDALQRGQRNSTCGHGGXXXXXXXXXXXXXGRGVMEVWSFERLARTPLLAVAFEDYSKRALCHESVLFLSEVSWYQNDDYATQTRASSGSSCPTQFGTLCYITDTFTKAGSPEEVNTSDADKKAI------------FEND------FSLAYLKVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSP 619 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig114.1081.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig114.1081.1 >prot_D-herbacea_F_contig114.1081.1 ID=prot_D-herbacea_F_contig114.1081.1|Name=mRNA_D-herbacea_F_contig114.1081.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=482bp MLGGIAVTVSFLVAINDSLRIIWGSEYSLRWFWSSILLFFITPNLFGSYFback to top mRNA from alignment at D-herbacea_F_contig114:558826..580504+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig114.1081.1 ID=mRNA_D-herbacea_F_contig114.1081.1|Name=mRNA_D-herbacea_F_contig114.1081.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=21679bp|location=Sequence derived from alignment at D-herbacea_F_contig114:558826..580504+ (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig114:558826..580504+ >mRNA_D-herbacea_F_contig114.1081.1 ID=mRNA_D-herbacea_F_contig114.1081.1|Name=mRNA_D-herbacea_F_contig114.1081.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2892bp|location=Sequence derived from alignment at D-herbacea_F_contig114:558826..580504+ (Desmarestia herbacea DmunF female)back to top |