mRNA_D-herbacea_F_contig114.1072.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig114.1072.1 vs. uniprot
Match: D8LJR2_ECTSI (Coatomer protein complex, gamma sub-unit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJR2_ECTSI) HSP 1 Score: 817 bits (2111), Expect = 1.290e-292 Identity = 407/442 (92.08%), Postives = 428/442 (96.83%), Query Frame = 2
Query: 140 MSIAPISQFFILSPRGDTIISKDYRGDAVAGTTDAFFRKVKFWEGGDPPPCFAIDGMNYIYVRKSGLLFAVSSHCNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDSAKSLRLPSSLKTKTAPSSSVQKPVAGTGKKSGTQRNEIFVDILERLSVLFSQSGQVVNSSIDGCIQMKSYLSGNPELRLALNEDLVVGKSNGAPGFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFVLLNYRINAEFRCPFRLFPSVADIDPYRMEVVVIVRADMPETAAGTNVMVRVPVPRNAVSVHTEVESRVPGQTAEYSATDHRVVWTIKKFQGSSELTLRAKVTLPNVVNNASRKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFRWVRYVTQSSSYVCRV 1465
MSIAP+SQFFILSPRGDTIISKDYRGDAVAGTTD FFRKVKFWE GDPPPCF IDG+NYIYVRK+GLLFAVS+ NVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDS KS+RLPS+LKTKTAPSSS+QKPV+G+G+K+G+QRNEIFVDILERLSVLFSQSGQVVNSSIDGCIQMKSYLSGNPELRLALNEDLVVGK+N FGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFVLLNYR+NAEFRCPFRLFPS+ DIDPYRMEVVVIVRADMPETAAGTNV+VR+P+PRNAVSV +EVESRVPGQTAEYSA +HRVVWTIKKFQGSSELTLRAKVTLPNVVN A+RKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFRWVRYVTQSSSYVCRV
Sbjct: 1 MSIAPVSQFFILSPRGDTIISKDYRGDAVAGTTDTFFRKVKFWESGDPPPCFTIDGVNYIYVRKNGLLFAVSTQWNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDSVKSMRLPSALKTKTAPSSSIQKPVSGSGQKNGSQRNEIFVDILERLSVLFSQSGQVVNSSIDGCIQMKSYLSGNPELRLALNEDLVVGKANAGSSFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFVLLNYRMNAEFRCPFRLFPSIGDIDPYRMEVVVIVRADMPETAAGTNVVVRLPMPRNAVSVSSEVESRVPGQTAEYSANEHRVVWTIKKFQGSSELTLRAKVTLPNVVNAANRKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFRWVRYVTQSSSYVCRV 442
BLAST of mRNA_D-herbacea_F_contig114.1072.1 vs. uniprot
Match: A0A835YW81_9STRA (Coatomer protein complex, gamma sub-unit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW81_9STRA) HSP 1 Score: 600 bits (1547), Expect = 4.400e-207 Identity = 301/444 (67.79%), Postives = 362/444 (81.53%), Query Frame = 2
Query: 140 MSIAPISQFFILSPRGDTIISKDYRGDAVAGTTDAFFRKVKFWEGGDPPPCFAIDGMNYIYVRKSGLLFAVSSHCNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDSAKSLRLPSSLKTKTAPSSSVQKPVAG-TGKKSGTQRNEIFVDILERLSVLFSQSGQVVNSSIDGCIQMKSYLSGNPELRLALNEDLVVGKSNGAPGFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFVLLNYRINAEFRCPFRLFPSVADIDPYRMEVVVIVRADMPETAAGTNVMVRVPVPRNAVSVHTEVESR-VPGQTAEYSATDHRVVWTIKKFQGSSELTLRAKVTLPNVVNNASRKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFRWVRYVTQSSSYVCRV 1465
MSIAPIS FFILSPRGDTIISKDYRGD V G TD FFRKVKF EGGDPPPC IDG+NY++VRK+GLLF V++ N SPS +ELL+RLAKVFKDYCG L+EEAIRKNFIL+YELLDE LDYGYPQ T TE+L+++V NEPI V+ +KSLR+PS+L KT PSS+ KP+ G TG QRNEIFVDILERL+VLF +GQ++NSSIDGCIQMKSYLSGNPEL+LALNEDLV+G+ + +G+VVLDDCNFHEC +LD+FES RQL+ PPDGEFV LNYRI AEFR PFR+FPSV + D +E++++VRADMPE G+NV+V VPVPR A +V E++ R +PGQ+AEY+AT RV WTIK+FQG +E +LR +VTL +R+E+GP+S FE+PMY+VS LQVRYLKIA+ K+YNP+RWVRYVT SSSYV RV
Sbjct: 1 MSIAPISHFFILSPRGDTIISKDYRGDVVPGGTDIFFRKVKFTEGGDPPPCMNIDGVNYLFVRKNGLLFGVTTRWNCSPSQVIELLHRLAKVFKDYCGTLTEEAIRKNFILIYELLDEMLDYGYPQTTGTESLKSYVYNEPIAVEPSKSLRIPSTLGAKTNPSSAAHKPITGSTG--GAKQRNEIFVDILERLNVLFGANGQILNSSIDGCIQMKSYLSGNPELKLALNEDLVIGRGQTST-YGAVVLDDCNFHECVRLDDFESGRQLTLVPPDGEFVALNYRITAEFRAPFRMFPSVTETDALHLELLLLVRADMPEAQYGSNVVVSVPVPRAAGTVSAEIDPRALPGQSAEYNATAKRVDWTIKRFQGGTEQSLRVRVTLTQPCTATTRRELGPISASFEVPMYSVSGLQVRYLKIADAGKAYNPYRWVRYVTLSSSYVARV 441
BLAST of mRNA_D-herbacea_F_contig114.1072.1 vs. uniprot
Match: A0A4D9D754_9STRA (MHD domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D754_9STRA) HSP 1 Score: 568 bits (1463), Expect = 5.350e-194 Identity = 285/472 (60.38%), Postives = 359/472 (76.06%), Query Frame = 2
Query: 155 ISQFFILSPRGDTIISKDYRGDAVAGTTDAFFRKVKFWEGGDPPPCFAIDGMNYIYVRKSGLLFAVSSHCNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDSAKS-LRLPSSLKTKTAPSSSVQKPVAGTGKKSGTQRNEIFVDILERLSVLFSQSGQVVNSSIDGCIQMKSYLSGNPELRLALNEDLVVGKSNGAPGFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFVLLNYRINAEFRCPFRLFPSVADIDPYRMEVVVIVRADMPETAAGTNVMVRVPVPRNAVSVHTEVESRVPGQTAEYSATDHRVVWTIKKFQGSSELTLRAKVTL----------------------------------PNVVNNASRKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFRWVRYVTQSSSYVCRV 1465
+S FFILSPRGDTIIS+D+RGD++ + FRKVKFW+ GD PP F +DG+N++YVRK+GLLF ++ NVSPS +ELLNR+AKVFKDYCGVLSEE+IRKNFILVYELLDE +D+GY Q TSTE+L+NHV NEPI+V+SAKS LR+P + +KT PS++V KP+ + + G Q+NEIFVDILERL+VLFS SG ++NS+IDGCIQMKSYLSGNPEL+LALN DLV+GK G G+G+VVLDDCNFHEC +LDEFES R LSF PPDGEF+LLNYRI EFR PFR+FP+V ++ PY++E+ +++RAD+PE+ G NV VRVP+PR+A++ T+EY+A++ RVVW IKKF G++E TL K+TL P + ++RKE+GPVSM FEIPMYNVSNLQVRYL+I+E KSYNP+RWVRYVTQ+SS+VCRV
Sbjct: 5 MSSFFILSPRGDTIISRDFRGDSLPNAAELLFRKVKFWDKGDAPPVFHLDGLNFVYVRKNGLLFGATTRFNVSPSTTVELLNRMAKVFKDYCGVLSEESIRKNFILVYELLDEMMDFGYAQATSTESLKNHVYNEPIVVESAKSNLRMPK-INSKTTPSTAVHKPITISAQSGGKQKNEIFVDILERLNVLFSGSGYIINSTIDGCIQMKSYLSGNPELKLALNSDLVIGKGGG--GYGAVVLDDCNFHECVRLDEFESSRTLSFFPPDGEFILLNYRITGEFRAPFRIFPTVDEVSPYKVEMTLMIRADIPESNYGANVQVRVPMPRSAIA------------TSEYNASEKRVVWNIKKFPGATEQTLSIKITLAGGGVXXXXXXXXXXXXXNSXSTGSMSAGGTAPPPGQLIGSARKEIGPVSMSFEIPMYNVSNLQVRYLRISEQQKSYNPYRWVRYVTQASSFVCRV 461
BLAST of mRNA_D-herbacea_F_contig114.1072.1 vs. uniprot
Match: A0A7S2UX12_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX12_9STRA) HSP 1 Score: 554 bits (1427), Expect = 1.360e-188 Identity = 275/446 (61.66%), Postives = 345/446 (77.35%), Query Frame = 2
Query: 155 ISQFFILSPRGDTIISKDYRGDAVAGTTDAFFRKVKFWEGGDPPPCFAIDGMNYIYVRKSGLLFAVSSHCNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDSA-------KSLRLPSSLKTKTAPSSSVQKPVAGT--GKKSGTQRNEIFVDILERLSVLFSQSGQVVNSSIDGCIQMKSYLSGNPELRLALNEDLVVGKSNGAPGFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFVLLNYRINAEFRCPFRLFPSVADIDPYRMEVVVIVRADMPETAAGTNVMVRVPVPRNAVSVHTEVESRVPGQTAEYSATDHRVVWTIKKFQGSSELTLRAKVTLPNVVNNASRKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFRWVRYVTQSSSYVCRV 1465
+SQFFILSPRG+TIISK YRG AG + FFRKVKFWEGGD PP F +DG NYIY++++G++F ++ N SP+ +ELLNR+ K+FKDYCGVLSEEAIRKNF+L+YELLDE +DYG+PQ TSTE L+N++ NEP+LVD ++LR ++ AP+SS KPV G GK QRNEIFVDI+ERL+VLFS SG +NSSIDG IQMKS+L+GNPELRLALN+DLV+GK G +GSVVLDDCNFHE +LD FE R LS PPDGEFV+LNYR+ +EFR PFRLFP++ ++ PY++E+V++VRAD+PE+ G NV V +PVPR A S E+ V GQ+ EY + ++VWTIKKF G +E LRAK+TL + A+R+E+GP+SM FEIPMYNVS+LQVRYL+IAE K+YNP+RWVRYVTQS+SYVCRV
Sbjct: 24 VSQFFILSPRGETIISKTYRGSFKAGAAEEFFRKVKFWEGGDAPPAFNLDGTNYIYIKRNGIIFLFTTMFNSSPATLIELLNRIIKIFKDYCGVLSEEAIRKNFVLLYELLDEVIDYGHPQCTSTEALKNYIYNEPVLVDQRGIAGQVQRNLRRVTN--PNKAPASSGAKPVQGATKGKAGAKQRNEIFVDIIERLNVLFSPSGYTLNSSIDGRIQMKSFLTGNPELRLALNDDLVIGKGGGQ--YGSVVLDDCNFHEAVRLDSFEMSRTLSLVPPDGEFVVLNYRVTSEFRTPFRLFPAIEEVSPYKLELVLMVRADIPESNYGANVTVTIPVPRTAASATGEMGENVVGQSCEYDQGERKLVWTIKKFPGGTEQGLRAKITLASATAPAARREIGPISMGFEIPMYNVSHLQVRYLRIAEADKTYNPYRWVRYVTQSNSYVCRV 465
BLAST of mRNA_D-herbacea_F_contig114.1072.1 vs. uniprot
Match: F0Y376_AURAN (MHD domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y376_AURAN) HSP 1 Score: 544 bits (1402), Expect = 3.700e-185 Identity = 282/447 (63.09%), Postives = 343/447 (76.73%), Query Frame = 2
Query: 155 ISQFFILSPRGDTIISKDYRGDAVAGTTDAFFRKVKFWEG-----GDPPPCFAIDGMNYIYVRKSGLLFAVSSHCNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDSAKSLRLPSSLKTKTAPSSSVQKPVAGTGKKS-----GTQRNEIFVDILERLSVLFSQSGQVVNSSIDGCIQMKSYLSGNPELRLALNEDLVVGKSNGAPGFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFVLLNYRINAEFRCPFRLFPSVADIDPYRMEVVVIVRADMPETAAGTNVMVRVPVPRNAVSVHTEVESR-VPGQTAEYSATDHRVVWTIKKFQGSSELTLRAKVTLPNVVNNASRKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFRWVRYVTQSSSYVCR 1462
+SQFF+LSPRGDTIISKD+RGD+ G +AFFRKVKFW G PP F + + Y++V+KSGL+FA +S N SPSM LELLNR+ KVFKDYCGVLSEEAIRKNFIL+YELLDE +D+GYPQGTSTE L+ V NEP+LVD+ K+ R+PS L KT PS+SV KP+AG GK S + +NEIFVDILERL++LFS SG VVNS+IDGCIQMKSYLSGNPELRLALNEDLVVGK +G+VVLDDCNFHEC +LD+FES R LSF PP+GEFV+LNYR +FR PFR+ P + + P+ ++VVV+VRA++PET G NV++ VP PR S G A+Y A + ++V+T+KKFQG E RAK+TL V +RKEVGPVS+ FEIPMYNVSNLQV+YL+IAE +K+YNP+RWVRYVT+SSSYVCR
Sbjct: 2 LSQFFVLSPRGDTIISKDFRGDSPQGAAEAFFRKVKFWSNDKGASGAAPPVFRVGDVTYVWVKKSGLMFACNSRFNCSPSMTLELLNRVVKVFKDYCGVLSEEAIRKNFILIYELLDEVIDFGYPQGTSTENLKAFVYNEPVLVDAQKT-RVPS-LSAKTTPSTSVHKPIAG-GKSSVMGGARSDKNEIFVDILERLTMLFSPSGAVVNSTIDGCIQMKSYLSGNPELRLALNEDLVVGKGGA---YGAVVLDDCNFHECVRLDDFESSRLLSFLPPEGEFVVLNYRCTGDFRAPFRVLPQIEESSPFTIDVVVLVRAEIPETNYGGNVVITVPCPRTTAGASCGPPSGGAIGHGADYDAANRKLVFTVKKFQGGVEHAFRAKITLSAVCTAQARKEVGPVSLTFEIPMYNVSNLQVKYLRIAEQSKAYNPYRWVRYVTRSSSYVCR 442
BLAST of mRNA_D-herbacea_F_contig114.1072.1 vs. uniprot
Match: A0A7S2SFF0_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SFF0_9STRA) HSP 1 Score: 543 bits (1398), Expect = 1.490e-184 Identity = 271/445 (60.90%), Postives = 350/445 (78.65%), Query Frame = 2
Query: 146 IAPISQFFILSPRGDTIISKDYRGDAVAGTTDAFFRKVKFWEGG-DPPPCFAIDGMNYIYVRKSGLLFAVSSHCNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDSAK---SLRLPSSLKTKTAPSSSVQKPVAGTGKKSGTQRNEIFVDILERLSVLFSQSGQVVNSSIDGCIQMKSYLSGNPELRLALNEDLVVGKSNGAPGFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFVLLNYRINAEFRCPFRLFPSVADIDPYRMEVVVIVRADMPETAAGTNVMVRVPVPRNAVSVHTEVESRVP--GQTAEYSATDHRVVWTIKKFQGSSELTLRAKVTLPNVVNNASRKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFRWVRYVTQSSSYVCR 1462
++ ISQF+ILSPRGDTIIS+DYR + G ++ FFR VKFW+GG + PPCF IDG+N++++++SGL F ++ NVSP+ FLELL RLAK+FKDYCGVLSEEAIRKNFIL+YELLDE +DYGYPQ TSTE L+ HV NEP++VDS K + ++PS + KT PSSSV KPV ++G QRNEIFVDILER+++LF+ +G +++S IDG IQMKSYL GNP LRLALNEDLVVGK +G+ +GSVVLDDCNFHEC +LDEFE+MR L+F PPDGEFV++NYRI+ EF PFR++P + + P ++EV+V +RAD+P G N+ V +PVP + V V+S V GQ+AEY +++VVW+IKKFQG SE T+RAK+ L ++ A R+E+GPVS+ FEIPM+NVSNLQV+YL+I E ++YNP RWVRYVTQ+ SYVCR
Sbjct: 1 MSSISQFYILSPRGDTIISRDYRSNVAKGASEIFFRNVKFWQGGGEAPPCFNIDGINFVFIKQSGLYFVCTTKYNVSPNFFLELLQRLAKLFKDYCGVLSEEAIRKNFILIYELLDEIVDYGYPQCTSTEQLKAHVHNEPVVVDSIKQANAFKVPS-INQKTTPSSSVYKPVTMAA-RNGQQRNEIFVDILERVTMLFNNNGYILSSHIDGSIQMKSYLFGNPPLRLALNEDLVVGKGDGS-NYGSVVLDDCNFHECVRLDEFETMRTLNFVPPDGEFVVMNYRISNEFVAPFRVYPFIEEATPTQIEVIVKIRADIPVNHFGANMTVTIPVPAKSNGVSARVDSGVSATGQSAEYRPKENKVVWSIKKFQGGSEHTVRAKIDLKEPISAAVRREIGPVSLNFEIPMFNVSNLQVKYLRIVEQNRTYNPHRWVRYVTQTCSYVCR 442
BLAST of mRNA_D-herbacea_F_contig114.1072.1 vs. uniprot
Match: A0A7S4A8F1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A8F1_9STRA) HSP 1 Score: 532 bits (1370), Expect = 1.690e-180 Identity = 268/441 (60.77%), Postives = 345/441 (78.23%), Query Frame = 2
Query: 155 ISQFFILSPRGDTIISKDYRGDAVAGTTDAFFRKVKFWEGGDPPPCFAIDGMNYIYVRKSGLLFAVSSHCNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDSAKSLRLPSSLKTKTAPSSSVQKPVAGTGKKSGT-----QRNEIFVDILERLSVLFSQSGQVVNSSIDGCIQMKSYLSGNPELRLALNEDLVVGKSNGAPGFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFVLLNYRINAEFRCPFRLFPSVADIDPYRMEVVVIVRADMPETAAGTNVMVRVPVPRNAVSVHTEVESRVPGQTAEYSATDHRVVWTIKKFQGSSELTLRAKVTLPNVVNNASRKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFRWVRYVTQSSSYVCR 1462
+SQFF+LSPRGDTIISKDYRGD+ G +AFFR+ + E PPCF I+ + Y++V++ GL+F ++ N SPS +ELLNRL KVFKDYCGVLSEEAIRKNFIL+YELLDE +D+GYPQGTSTE L+ + NEP+LVD+ K LR+PS L TKT SS+V KP+ +K+GT RNEIFVDILERL++LF+ +G VVNS+IDGCIQMKSYL+GNPELRLALNEDLVVGK G P +G+VVLDDCNFHEC +LD+FE+ R LSF PP+GEFV+LNYR +FR PFR+ P + + PY++E++V+VR+++P+T G++V + VP PRN + S G +A+Y+AT ++ + +KKFQG EL RAK+TL ++ +RKE+GPVSM FEIPMYNVSNLQV+YL+IAE +++YNP+RWVRYVT+SSSYVCR
Sbjct: 2 LSQFFVLSPRGDTIISKDYRGDSPPGAAEAFFRRCR--EERSCPPCFRINDVTYVWVKQHGLMFVCNTRFNASPSTIIELLNRLVKVFKDYCGVLSEEAIRKNFILIYELLDEIVDFGYPQGTSTENLKACIYNEPLLVDAQK-LRVPS-LSTKTVSSSAVHKPIGS--RKTGTIGGGAARNEIFVDILERLTMLFAANGSVVNSTIDGCIQMKSYLAGNPELRLALNEDLVVGK--GGP-YGTVVLDDCNFHECVRLDDFEAQRLLSFVPPEGEFVVLNYRTAGDFRAPFRVLPQIEEATPYQLEIIVLVRSEIPDTNYGSDVTITVPCPRNCTAASATAPS---GSSADYNATQRKLTFHVKKFQGGLELAFRAKITLSSICTAQTRKEIGPVSMTFEIPMYNVSNLQVKYLRIAEASQNYNPYRWVRYVTRSSSYVCR 430
BLAST of mRNA_D-herbacea_F_contig114.1072.1 vs. uniprot
Match: A0A812WLM7_SYMMI (AP4M protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WLM7_SYMMI) HSP 1 Score: 531 bits (1368), Expect = 4.030e-180 Identity = 265/438 (60.50%), Postives = 336/438 (76.71%), Query Frame = 2
Query: 155 ISQFFILSPRGDTIISKDYRGDAVAGTTDAFFRKVKFWEGGDPPPCFAIDGMNYIYVRKSGLLFAVSSHCNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDSAK-SLRLPSSLKT-KTAPSSSVQKPVAGTGKKSGTQRNEIFVDILERLSVLFSQSGQVVNSSIDGCIQMKSYLSGNPELRLALNEDLVVGKSNGAPGFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFVLLNYRINAEFRCPFRLFPSVADIDPYRMEVVVIVRADMPETAAGTNVMVRVPVPRNAVSVHTEVESRVPGQTAEYSATDHRVVWTIKKFQGSSELTLRAKVTLPNVVNNASRKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFRWVRYVTQSSSYVCR 1462
I QFFILSPRGD IISKD+RGD + FF KVKFWE GD PP F +DG+NYIY+R+S LL A ++ NVSP+ LELLNR+AKV KDYCGVL+EEAIR NF L+YELLDE LDYGYPQ TSTETL+N V N+ ++V+ +L + S+ T KT PS + PVA G +S Q+NEI+VDI+E+L+VLF+ +G VVNSSIDG IQMKS+LSGNPELRLALNEDLV+GK + +GSVV+DDCNFHEC +LDEFE+ R L F PPDGEF +LNYRI +FR PFRLFPS+ + PY+++V+ +VRA++PE G V++ +PVPR SV E+ +PG +AE+ ++ +V WTI+K G+SEL +R K+TL A ++E+GP++MQFEIPMYNVSNLQV+YL+I+E KSYNP+RWVRY+T SSSYVCR
Sbjct: 3 IGQFFILSPRGDCIISKDFRGDEHPTMHEDFFHKVKFWEKGDAPPIFFLDGVNYIYIRRSSLLLACTTRMNVSPASILELLNRVAKVVKDYCGVLTEEAIRCNFSLIYELLDEMLDYGYPQNTSTETLKNFVHNDAVIVNQQTVALNIMQSIGTGKTKPSIASNLPVA-LGSRSSKQKNEIYVDIVEKLTVLFNSNGVVVNSSIDGAIQMKSFLSGNPELRLALNEDLVIGKGST---YGSVVMDDCNFHECVRLDEFEASRTLHFVPPDGEFTVLNYRITGDFRSPFRLFPSIEETGPYKLDVLCLVRAEIPEGNHGAGVVINIPVPRATASVSFEMSVNMPGSSAEFISSSKKVQWTIRKMVGASELAIRCKLTLDQPATAAHKREIGPIAMQFEIPMYNVSNLQVKYLRISETHKSYNPYRWVRYITLSSSYVCR 436
BLAST of mRNA_D-herbacea_F_contig114.1072.1 vs. uniprot
Match: A0A7S1C3I7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C3I7_9STRA) HSP 1 Score: 533 bits (1373), Expect = 5.240e-180 Identity = 271/457 (59.30%), Postives = 349/457 (76.37%), Query Frame = 2
Query: 146 IAPISQFFILSPRGDTIISKDYRGDAVAGTTDAFFRKVKFWEGGDPPPCFAIDGMNYIYVRKSGLLFAVSSHCNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVDS--AKSLRLPSSLKTKTAPSSSVQKPVAGTGKKSGTQRNEIFVDILERLSVLFSQSGQVVNSSIDGCIQMKSYLSGNPELRLALNEDLVVGKSNGAPGFGSVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFVLLNYRINAEFRCPFRLFPSVADIDPYRMEVVVIVRADMPETAAGTNVMVRVPVPRNAVSVHTEV--ESRVPG-------------QTAEYSATDHRVVWTIKKFQGSSELTLRAKVTLPNVVNNASRKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFRWVRYVTQSSSYVCRV 1465
+A I QFFILSPRGDTIISK YRGD VAGT++ FFRKVKFW+G D PP F IDG+N+++++++GL F ++ NVSPSM +ELL+R+AKVFKDYCGVLSEE+IRKNFILVYELLDE +DYGY QGT+TETL+ +V NEPI++ S A +LP+ KT +S+V P++ G++ G ++NEIFVDILERL+VLF+ +G V+NS+IDG IQMKSYL+GNP LR+ALNEDLVVGK G +G+VVLDDCNFHE LDEFE + ++ PP+GEFV++NYRI ++FR PFR+FP V + PY++E+V+ VRAD+P ++ G NV+VR PVPR + +V E+ S+ G + AEY D V+W IKKFQG +E TLR K+TL + RKE+GP+S+ FEIPMYNVS+LQV+YL+IAE +KSY P RWVRYVTQSSSYVCR+
Sbjct: 41 VAMIGQFFILSPRGDTIISKQYRGDVVAGTSEIFFRKVKFWKG-DAPPVFVIDGINFLFIKRNGLYFVATTRFNVSPSMTIELLDRVAKVFKDYCGVLSEESIRKNFILVYELLDELVDYGYAQGTTTETLKAYVYNEPIVLASGGAGGFKLPTGGSGKTKSASAVHAPISLAGRRKG-KKNEIFVDILERLTVLFNSNGYVLNSTIDGSIQMKSYLTGNPPLRIALNEDLVVGKGGGG-AYGAVVLDDCNFHEVVNLDEFEDSKVMTLVPPEGEFVVMNYRITSDFRAPFRVFPFVEETSPYKVELVLKVRADIPASSYGANVLVRFPVPRTSATVTPEIGPSSQAVGTAAAGGADAGGSAEQAEYRGKDKEVLWLIKKFQGGTEHTLRTKITLSAPSTTSIRKEIGPISLNFEIPMYNVSSLQVKYLRIAEASKSYKPHRWVRYVTQSSSYVCRL 494
BLAST of mRNA_D-herbacea_F_contig114.1072.1 vs. uniprot
Match: A0A2R5G7K4_9STRA (AP-4 complex subunit mu n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G7K4_9STRA) HSP 1 Score: 528 bits (1360), Expect = 1.030e-178 Identity = 270/445 (60.67%), Postives = 338/445 (75.96%), Query Frame = 2
Query: 155 ISQFFILSPRGDTIISKDYRGDAVAGTTDAFFRKVKFWEG---GDPPPCFAIDGMNYIYVRKSGLLFAVSSHCNVSPSMFLELLNRLAKVFKDYCGVLSEEAIRKNFILVYELLDETLDYGYPQGTSTETLRNHVRNEPILVD---SAKSLRLPSSLKTKTAPSSSVQKPVAGTGKKSGTQRNEIFVDILERLSVLFSQSGQVVNSSIDGCIQMKSYLSGNPELRLALNEDLVVGKSNGAPGFG-SVVLDDCNFHECAKLDEFESMRQLSFTPPDGEFVLLNYRINAEFRCPFRLFPSVADIDPYRMEVVVIVRADMPETAAGTNVMVRVPVPR--NAVSVHTEVESRVPGQTAEYSATDHRVVWTIKKFQGSSELTLRAKVTLPNVVNNASRKEVGPVSMQFEIPMYNVSNLQVRYLKIAEFAKSYNPFRWVRYVTQSSSYVCR 1462
+SQF+ILSPRGDTIIS+++R D GT + FF VKFW+G + PPCF IDG+NYI++++SGL F ++ NVSP+ LELL RLAK+FKDYCGVLSEEAIRKNF+L+YELLDE LDYGYP +STE L+ HV NEP++VD A S ++P+ + KT PSSSV KPV KSG QRNEIFVDILERL++LF+ +G ++S IDG I MKSYLSGNP LRLALNEDLVVGK + A +G SVVLDDCNFHEC +LD+FESMR L+F PPDGEFVL+NYRI ++F PFR++P V + ++E+VV +RAD+P+ G NV +PVP N VS + + GQTAEY A DH+VVWTIKKFQG +E TLRAKV L ++ A R+E+GP+S+ FEIPM+N S LQV+YL+I E ++YNP RWVRYV+QS+SYV R
Sbjct: 4 VSQFYILSPRGDTIISRNFRSDVDKGTAEVFFHSVKFWKGDGGNEAPPCFNIDGVNYIFIKQSGLYFVCTTKYNVSPNFALELLARLAKLFKDYCGVLSEEAIRKNFVLIYELLDEVLDYGYPMVSSTEQLKVHVHNEPVMVDMIKQANSFKMPT-MNQKTTPSSSVYKPVT-LAAKSGQQRNEIFVDILERLTMLFNGNGYTLSSHIDGSIVMKSYLSGNPPLRLALNEDLVVGKGSEAANYGGSVVLDDCNFHECVRLDDFESMRLLNFVPPDGEFVLMNYRITSDFVAPFRIYPHVEENSSTQIEIVVKIRADLPQNNFGVNVQATMPVPTRSNGVSSRLDSGAAAAGQTAEYRAKDHKVVWTIKKFQGGAEHTLRAKVDLKEPMSPAIRREIGPISLSFEIPMFNASQLQVKYLRIVEQHRTYNPHRWVRYVSQSASYVSR 446 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig114.1072.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig114.1072.1 >prot_D-herbacea_F_contig114.1072.1 ID=prot_D-herbacea_F_contig114.1072.1|Name=mRNA_D-herbacea_F_contig114.1072.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=443bp MSIAPISQFFILSPRGDTIISKDYRGDAVAGTTDAFFRKVKFWEGGDPPPback to top mRNA from alignment at D-herbacea_F_contig114:343230..352112+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig114.1072.1 ID=mRNA_D-herbacea_F_contig114.1072.1|Name=mRNA_D-herbacea_F_contig114.1072.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=8883bp|location=Sequence derived from alignment at D-herbacea_F_contig114:343230..352112+ (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig114:343230..352112+ >mRNA_D-herbacea_F_contig114.1072.1 ID=mRNA_D-herbacea_F_contig114.1072.1|Name=mRNA_D-herbacea_F_contig114.1072.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2658bp|location=Sequence derived from alignment at D-herbacea_F_contig114:343230..352112+ (Desmarestia herbacea DmunF female)back to top |