mRNA_D-herbacea_F_contig114.1070.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig114.1070.1
Unique NamemRNA_D-herbacea_F_contig114.1070.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
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BLAST of mRNA_D-herbacea_F_contig114.1070.1 vs. uniprot
Match: D8LJR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJR3_ECTSI)

HSP 1 Score: 501 bits (1290), Expect = 2.780e-170
Identity = 247/349 (70.77%), Postives = 292/349 (83.67%), Query Frame = 1 
Query:    4 EMRALAESKRKPLKGVRHVTVQPGQRSYLLTGQRGTGKSCVLNHLVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVFENLYDLPIQSLKRLKSLRDAHADQLKDISIKDPEVLARHEGAKTLLDLVDLGVDNEELAGTVHYDAMRELLATTEAKVLLAIDEYNELFQMSHWHYGDNKLEAPDLTATVPLVPAAKTTPTGLAFADEGLSSVANPEADKQTKKA-----ALPRLDKETGAACLPPPPANGIVVCATSSRYPPVKKLKKKKTWAPFEDVAGRLAKAVAIPVEPYSRHEMSRVVKQYSNVEQVLPEPLSEVEFAKLHAKSNGLAEWVFNTCQSAHYRVFVPE 1035
            EM+ALAESKRKPLKGVR V +QPGQRSYLLTG+RG+GKSCVL+H VLHARSTGWIVLFVPDGRNLVQKGIYCQPSPV E LYDLP+QS+KRLK+LR+AH DQLK+ISIKDPEVL RHEGAKTLLD++D+G+ ++E AGT HYD MRELLATTEAKV+LAIDEYNELFQMS WHYGDNKLEAP LTAT+PL+P   +T TGLAFAD+ ++++ANPE   + K+       +  +  ETGAACLPPPPANGIVVCA S RYPP+K+L+K K W PFE  AGRLA+AV+IPVEPY+R E  RV+K Y+ VE+V+ EPL  +E AK+HAKS+ L E VF+TC++  YR  V E
Sbjct:  330 EMKALAESKRKPLKGVRRVVIQPGQRSYLLTGRRGSGKSCVLDHAVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVLEGLYDLPVQSMKRLKTLREAHGDQLKNISIKDPEVLGRHEGAKTLLDVMDMGLADQEHAGTAHYDVMRELLATTEAKVMLAIDEYNELFQMSQWHYGDNKLEAPHLTATLPLLPPLVSTGTGLAFADDSVAALANPEVVAERKRTPAEAGGVAWMSPETGAACLPPPPANGIVVCAVSGRYPPLKRLRKNKKWVPFEATAGRLAQAVSIPVEPYTRREFLRVLKHYARVEEVVNEPLDTMEVAKVHAKSDSLPEHVFDTCRAGRYRTAVHE 678
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BLAST of mRNA_D-herbacea_F_contig114.1070.1 vs. uniprot
Match: A0A6H5KXH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXH7_9PHAE)

HSP 1 Score: 298 bits (763), Expect = 3.450e-92
Identity = 170/298 (57.05%), Postives = 205/298 (68.79%), Query Frame = 1 
Query:    4 EMRALAESKRKPLKGVRHVTVQPGQRSYLLTGQRGTGKSCVLNHLVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVFENLYDLP--IQSLKRLKSLRDAHADQLKDISIKDPEVLARHEGAKTLLDLVDLGVDNEELAGTVHYDAMRELLATTEAKVLLAIDEYNELFQMSHWHYGDNK-------LEAPDLTATVPLVPAAKTTPTGLAFADEGLSSVANPEADKQTKKAALPR-----LDKETGAACLPPPPANGIVVCATSSRYPPVKKLKKKKTWAPFEDVAGRLAKAVAIPV 855
            EM+ALAESKRKPLKGVR V +QPGQ         G G           AR+   I+   P             P+P    L   P  +QS+KRLK+LR+AH DQLK+ISIKDPEVL RHEGAKTLLD++D+G+ ++E AGT HYD MRELLATTEAKV+LAIDEYNELFQMSHW+YGD+K       LEAP LTAT+PL+P   +T TGLAFAD+ ++++ANPE   +TK+          +  ETGAACLPPPPANGIVVCA S RYPPVK+L+K K W PFE  AGRLA+AV++ V
Sbjct:  326 EMKALAESKRKPLKGVRRVVIQPGQ---------GGGAP---------ARAASSIM---PSST----------PAPAHPTLRSPPPVLQSMKRLKTLREAHGDQLKNISIKDPEVLGRHEGAKTLLDVMDMGLADQEHAGTAHYDVMRELLATTEAKVMLAIDEYNELFQMSHWYYGDSKASAAVSRLEAPHLTATLPLLPPLVSTGTGLAFADDSVAALANPEVVAETKRTPAEAGGGAWMSPETGAACLPPPPANGIVVCAVSGRYPPVKRLRKNKKWVPFEATAGRLAQAVSVRV 592
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BLAST of mRNA_D-herbacea_F_contig114.1070.1 vs. uniprot
Match: A0A836C8P4_9STRA (Mitochondrial ribosomal death-associated protein 3-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8P4_9STRA)

HSP 1 Score: 157 bits (396), Expect = 5.300e-39
Identity = 108/335 (32.24%), Postives = 156/335 (46.57%), Query Frame = 1 
Query:   76 QRSYLLTGQRGTGKSCVLNHLVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVFENLYDLPIQSLKRLKSLRDAHADQLKDISIKDPEVLARHE---GAKTLLDLVDL---------GVDNE------ELAGTVHYDAMRELLATTEAKVLLAIDEYNELFQMSHWHYG----------------DNKLEAPDLTATVPLVPAAKTTPTGLAFADEGLSSVANPEADKQTKKAALPRLDKETGAACLPPP--PANGIVVCATSSRYPPVKKLKKKKT-WAPFEDVAGRLAKAVAIPVEPYSRHEMSRVVKQYSNVEQVLPEPLSEVEFAKLHAKS 969
            QR++LL G RGTGKS  LNH V +AR+ GW+VLFVP+ R L++ GIYCQPS     +YD P+ + + +  L  AH  QL+++ ++D    AR+    G+   L + D+         GVD+E        A     D + ELL+T    VLLA+DEY+ELFQ S WHY                 ++K+    L   +  +P  K T             V  P          +P      G  C P P  P  G V+ A +  YPPV+K+K K   W  F+D  G  A    +   PYS  E +  +  Y+  +      L + + A++  K+
Sbjct:  241 QRAFLLRGARGTGKSAALNHAVHYARANGWVVLFVPEARKLLRTGIYCQPSARVAGMYDTPLHAQRMIAQLLAAHGPQLQELEVQDATRRARYAAFAGSSGRLSVADMAKPGLPAGKGVDDEVFEAAENAADGCFADIVEELLSTEAVPVLLAVDEYSELFQPSAWHYRRDVDHLAAFDIDDEDYEDKVREARLHVQLERIPGEKLT-------------VVAPF---------MPFRPPPDGGLCDPAPFTPRRGAVIAAETLHYPPVRKIKGKSVRWPYFDDFVGTSADPWTVETAPYSAEEFAAALGHYAACDMYDERALGDADVARVRIKT 553
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BLAST of mRNA_D-herbacea_F_contig114.1070.1 vs. uniprot
Match: A0A7S2DHI4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DHI4_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.670e-19
Identity = 83/276 (30.07%), Postives = 127/276 (46.01%), Query Frame = 1 
Query:   97 GQRGTGKSCVLNHLVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVFENLYDLPIQSLKRLKSLRDAHADQLKDISIKDPEVLARHEGAKTLLDLVDLGVDNEELAGTVHYDAMRELLATTEAKVLLAIDEYNELFQMSHWHYGDNKLEAPDLTATVPLVPAAKTTPTGLAFADEGLSSVANPEADKQTKKAALPRLDKETGAACLPPPPANGIVVCATSSRYPPV----KKLKKKKTWAPFEDVAGRLAKAVAIPVEPYSRHEMSRVVKQYSNVE 912
            G+RGTGK+  L H V  AR  GWI L +P GR LV  G++  PS   +  +D P  + + LK    AH+  L  ++++     +++    TL D++ +G+ +E+ A         EL+A TE  VL+AIDEYN LF+ + + +   +LE+  L     LV A K            L S +N                           PA G VV A S+R+P V    K+   K     +ED      KAV +P  P+S  +  + V+ + ++E
Sbjct:  125 GERGTGKTATLLHTVHWARREGWITLHIPSGRELVYGGLWVNPSSEKDGSFDQPQVAHQILKDFGAAHSHDLTALNLQ--HAASKNRYGSTLADVLQIGIADEDEATAALVVLKGELVAQTERPVLIAIDEYNALFEATPYSFAQKQLESEQLV----LVKAFK-----------DLHSPSNH--------------------------PARGAVVLADSNRFPAVVGHFKRNLSKDIDELYEDY-----KAVEVP--PFSSEQYVKCVELFDSLE 350
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BLAST of mRNA_D-herbacea_F_contig114.1070.1 vs. uniprot
Match: A0A484EHW5_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EHW5_BRELC)

HSP 1 Score: 98.6 bits (244), Expect = 5.060e-19
Identity = 80/313 (25.56%), Postives = 134/313 (42.81%), Query Frame = 1 
Query:   82 SYLLTGQRGTGKSCVLNHLVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVFENLYDLPIQSLKRLKSLRDAHADQLKDISIKDPEV-----LARHEG-----------AKTLLDLVDLGVDNEELAGTVHYDAMRELLATTEAKVLLAIDEYNELFQMSHWHYGDNKLEAPDLTATVPLVPAAKTTPTGLAFADEGLSSVANPEADKQTKKAALPRLDKETGAACLPPPPANGIVVCATSSRYPPVKKLKKKKTWAPFEDVAGRLAKAVAIPVEPYSRHEMSRVVKQYSNVEQVLPEPL-SEVEFAKLHAKS 969
            +YL+ G+RGTGKS  L+H+V  AR T W+VL++P+ R+   +  Y   SP  +  +D+ +  +  L+     H +Q+K I ++           +HE            A TL D+V  G+ +EELA     D   EL  TTE  VL+A+D+YN  FQ + + Y    +   D++                      +SS+ +  A    +   L                 NG+ V A +  +P     KK+  +           + +   + PY+  E++ V+  Y+ V  +   P  SE+ + +L  KS
Sbjct:  124 AYLIDGERGTGKSFALHHIVQFARETNWVVLYIPNPRSWTHEAPYVMLSPYQQGKFDIDVYGVDLLQKFLHCHGEQIKSIPLRGEYSDRYYQTDKHESKPKNAEDCKGAALTLYDIVIGGIRDEELACQAVCDLKEELAQTTEFNVLIAVDDYNAWFQSTVFGYEGVDVGPDDISV---------------------ISSLKDIGAKGYNESRKL----------------KNGLFVAAVTENFPTKVHFKKQVDY-----------RKIRATMRPYTAEELATVISYYNQVNFLHGMPTESELAYFRLMTKS 388
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BLAST of mRNA_D-herbacea_F_contig114.1070.1 vs. uniprot
Match: A0A1V9Y7H5_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y7H5_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 2.740e-14
Identity = 52/165 (31.52%), Postives = 84/165 (50.91%), Query Frame = 1 
Query:   79 RSYLLTGQRGTGKSCVLNHLVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVFENLYDLPIQSLKRLKSLRDAHADQLKDISI---------------KDPEVLARHEGAK-TLLDLVDLGVDNEELAGTVHYDAMRELLATTEAKVLLAIDEYNELFQMSHWHY 525
            ++++L G+RGTGK+  L  +V  AR  GWIVLF P  R       Y   S   E  +D+ + ++  +K L + H +QL ++ I               K P+  + +     TLLD+ + G+ ++ L+ +   D   EL   T+  VL+AIDEYN LF+ + + Y
Sbjct:   15 KAFVLDGERGTGKTVALLQIVQFARENGWIVLFAPQVRAWCYDAPYVTKSAHIEGKFDIDVVAMDIIKQLIEFHGEQLAELLIQGDYADNKYYPRSFEKKPKSSSEYNKEDLTLLDMAENGLKDDLLSCSALVDLRAELAKVTKYPVLIAIDEYNTLFEKTVFGY 179
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BLAST of mRNA_D-herbacea_F_contig114.1070.1 vs. uniprot
Match: A0A388LU35_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LU35_CHABU)

HSP 1 Score: 75.1 bits (183), Expect = 5.720e-11
Identity = 55/190 (28.95%), Postives = 88/190 (46.32%), Query Frame = 1 
Query:   55 HVTVQPGQRSYLLTGQRGTGKSCVLNHLVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVFENLYDLPIQSLKRLKSLRDAHADQLKDISIKDPEVLA---------------------RHEGAK------------TLLDLVDLGVDNEELAGTVH--YDAMRELLATTEAKVLLAIDEYNELFQMSHW 519
            H+  +P  R++LL G  G+GKS  L   V  AR++GW+V +VP GR+ ++ G + + +    NL+D P+ +   L+ L ++H D L  + +K PE +                       +EGA             +L DLV  G+   +    V       +EL   T+  VL+AIDE+N  F  S +
Sbjct:  200 HIGRRPFGRNFLLDGPVGSGKSVALATAVHWARASGWLVFYVPSGRDWIKGGFFQKHAQT--NLWDTPVAAKNALQGLMNSHEDLLAALPLKVPEPIPVETIPTRPGRLGPAQSGEPANENEGASGSGAGEEISGGGSLRDLVSRGLKMTQANALVSCVVRVRKELSQVTDVPVLIAIDEFNSWFGYSDY 387
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BLAST of mRNA_D-herbacea_F_contig114.1070.1 vs. uniprot
Match: A0A067CQ98_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CQ98_SAPPC)

HSP 1 Score: 73.9 bits (180), Expect = 1.020e-10
Identity = 54/183 (29.51%), Postives = 91/183 (49.73%), Query Frame = 1 
Query:   76 QRSYLLTGQ----RGTGK--SCV-LNHLVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVFENLYDLPIQSLKRLKSLRDAHADQLKDISI--------------KDPEVLARHEGAK-TLLDLVDLGVDNEELAGTVHYDAMRELLATTEAKVLLAIDEYNELFQMSHWHYGDNKLEAPDLT 558
            +++++LT      RGT +  +CV L  +V  AR  GWIVLF P  R    +  Y   S   +  YD+ + ++  LK L  +H  QL ++ +              K P+  + ++ A  TLLD+ + G+ ++ L+     D   EL   T+  VL+AIDEYN LF+ + + Y  + +   D++
Sbjct:  123 EKAFVLTASVARARGTYRQATCVALLQIVNFARENGWIVLFAPHVRAWCYEAPYVTKSAHIQGKYDIDVVAMDVLKQLIQSHGHQLAELPLSADYGDKYYPHTFEKKPKSTSEYDKASLTLLDMAENGLKDDLLSCAALVDLRAELAKVTKFPVLIAIDEYNTLFEKTVFGYEGHDVAPRDIS 305
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BLAST of mRNA_D-herbacea_F_contig114.1070.1 vs. uniprot
Match: A0A8J5L9J4_ZINOF (Uncharacterized protein n=4 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5L9J4_ZINOF)

HSP 1 Score: 73.2 bits (178), Expect = 2.150e-10
Identity = 52/165 (31.52%), Postives = 74/165 (44.85%), Query Frame = 1 
Query:   76 QRSYLLTGQRGTGKSCVLNHLVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVFENLYDLPIQSLKRLKSLRDAHADQLKDI--SIKDPEVLARHEGA--------------KTLLDLVDLGVDNEELAGTVHYDAMRELLATTEAKVLLAIDEYNELFQMSHWH 522
            ++  +L G    GKS  L  LV  ARS GW+V +VP GR+    G Y +   + + L+D P+Q+ K L+     +  +LK +   I DP +L    G                TL DL+  G+     A  V      EL    +  VL AID+YN  F  S +H
Sbjct:  182 KKQIVLDGPVSCGKSVALALLVHWARSEGWLVFYVPKGRDWTHGGFYYKN--LHKELWDTPVQAEKNLQDFLKFNEGRLKQLPCQIFDPILLGEGTGVGLMKGVDSMAMPEGSTLYDLIQTGIAYSHAAVGVLVRLREELSLVKDVPVLFAIDQYNNWFTFSEYH 344
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BLAST of mRNA_D-herbacea_F_contig114.1070.1 vs. uniprot
Match: A0A2R6XER2_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XER2_MARPO)

HSP 1 Score: 73.2 bits (178), Expect = 2.540e-10
Identity = 53/161 (32.92%), Postives = 74/161 (45.96%), Query Frame = 1 
Query:   88 LLTGQRGTGKSCVLNHLVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVFENLYDLPIQSLKRLKSLRDAHADQLKDISIKDPEVLARHEGA----------------KTLLDLVDLGVDNEELAGTVHYDAMRELLATTEAKVLLAIDEYNELFQMSHWH 522
            LL G   +GKS  L  LV  AR+ GW+V +VP GR+    G+Y +       LYD P+Q+   L+    +H   L  I  +  + L   EGA                 +L  LV+ G+   + + +V      EL    EA VLL IDE+N  F  SH+H
Sbjct:  262 LLDGFIKSGKSAALAMLVHWARAQGWLVFYVPSGRDWTSGGMYYKNEQT--GLYDTPVQARVALEGFLKSHRSLLDTIPCRVLKPLQLGEGAGVGKLRGAQELTLPEGASLRALVEKGIAVSQASVSVVLRIREELSLVQEAPVLLCIDEFNSWFTFSHFH 420
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig114.1070.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJR3_ECTSI2.780e-17070.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KXH7_9PHAE3.450e-9257.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C8P4_9STRA5.300e-3932.24Mitochondrial ribosomal death-associated protein 3... [more]
A0A7S2DHI4_9STRA1.670e-1930.07Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A484EHW5_BRELC5.060e-1925.56Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A1V9Y7H5_9STRA2.740e-1431.52Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A388LU35_CHABU5.720e-1128.95Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A067CQ98_SAPPC1.020e-1029.51Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A8J5L9J4_ZINOF2.150e-1031.52Uncharacterized protein n=4 Tax=Zingiber officinal... [more]
A0A2R6XER2_MARPO2.540e-1032.92Uncharacterized protein n=2 Tax=Marchantia polymor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig114contigD-herbacea_F_contig114:333958..338804 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score505.8
Seed ortholog evalue1.6e-140
Seed eggNOG ortholog2880.D8LJR3
Preferred nameDAP3
KEGG koko:K06072,ko:K17408
Hectar predicted targeting categoryother localisation
GOsGO:0000313,GO:0000314,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0005761,GO:0005763,GO:0005840,GO:0006412,GO:0006414,GO:0006415,GO:0006518,GO:0006807,GO:0006915,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008219,GO:0008637,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0012501,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0019866,GO:0022411,GO:0023052,GO:0031090,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032543,GO:0032984,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070013,GO:0070125,GO:0070126,GO:0071704,GO:0071840,GO:0097190,GO:0098798,GO:0140053,GO:1901564,GO:1901566,GO:1901576,GO:1990904
EggNOG free text desc.mitochondrial translation
EggNOG OGsKOG3928@1,KOG3928@2759
Ec32 ortholog descriptionMitochondrial ribosomal protein S23/S29
Ec32 orthologEc-12_002970.1
EC1.14.99.29
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko01000,ko03011,ko03029
Exons9
Model size1221
Cds size1032
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927540.7502108-UTR-D-herbacea_F_contig114:333957..3341401622927540.7502108-UTR-D-herbacea_F_contig114:333957..334140Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig114 333958..334140 -
1690790223.7241163-UTR-D-herbacea_F_contig114:333957..3341401690790223.7241163-UTR-D-herbacea_F_contig114:333957..334140Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig114 333958..334140 -
1622927540.9041383-UTR-D-herbacea_F_contig114:338798..3388041622927540.9041383-UTR-D-herbacea_F_contig114:338798..338804Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig114 338799..338804 -
1690790223.818621-UTR-D-herbacea_F_contig114:338798..3388041690790223.818621-UTR-D-herbacea_F_contig114:338798..338804Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig114 338799..338804 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927540.763422-CDS-D-herbacea_F_contig114:334140..3342531622927540.763422-CDS-D-herbacea_F_contig114:334140..334253Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig114 334141..334253 -
1690790223.7346084-CDS-D-herbacea_F_contig114:334140..3342531690790223.7346084-CDS-D-herbacea_F_contig114:334140..334253Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig114 334141..334253 -
1622927540.773441-CDS-D-herbacea_F_contig114:334668..3347471622927540.773441-CDS-D-herbacea_F_contig114:334668..334747Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig114 334669..334747 -
1690790223.7421997-CDS-D-herbacea_F_contig114:334668..3347471690790223.7421997-CDS-D-herbacea_F_contig114:334668..334747Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig114 334669..334747 -
1622927540.7830796-CDS-D-herbacea_F_contig114:335442..3357511622927540.7830796-CDS-D-herbacea_F_contig114:335442..335751Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig114 335443..335751 -
1690790223.756663-CDS-D-herbacea_F_contig114:335442..3357511690790223.756663-CDS-D-herbacea_F_contig114:335442..335751Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig114 335443..335751 -
1622927540.7941484-CDS-D-herbacea_F_contig114:336391..3365231622927540.7941484-CDS-D-herbacea_F_contig114:336391..336523Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig114 336392..336523 -
1690790223.7652285-CDS-D-herbacea_F_contig114:336391..3365231690790223.7652285-CDS-D-herbacea_F_contig114:336391..336523Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig114 336392..336523 -
1622927540.8119817-CDS-D-herbacea_F_contig114:337029..3370951622927540.8119817-CDS-D-herbacea_F_contig114:337029..337095Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig114 337030..337095 -
1690790223.7730424-CDS-D-herbacea_F_contig114:337029..3370951690790223.7730424-CDS-D-herbacea_F_contig114:337029..337095Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig114 337030..337095 -
1622927540.8233688-CDS-D-herbacea_F_contig114:337534..3376091622927540.8233688-CDS-D-herbacea_F_contig114:337534..337609Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig114 337535..337609 -
1690790223.7805607-CDS-D-herbacea_F_contig114:337534..3376091690790223.7805607-CDS-D-herbacea_F_contig114:337534..337609Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig114 337535..337609 -
1622927540.8358514-CDS-D-herbacea_F_contig114:337968..3380801622927540.8358514-CDS-D-herbacea_F_contig114:337968..338080Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig114 337969..338080 -
1690790223.7879488-CDS-D-herbacea_F_contig114:337968..3380801690790223.7879488-CDS-D-herbacea_F_contig114:337968..338080Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig114 337969..338080 -
1622927540.8816395-CDS-D-herbacea_F_contig114:338282..3383561622927540.8816395-CDS-D-herbacea_F_contig114:338282..338356Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig114 338283..338356 -
1690790223.7984977-CDS-D-herbacea_F_contig114:338282..3383561690790223.7984977-CDS-D-herbacea_F_contig114:338282..338356Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig114 338283..338356 -
1622927540.8938286-CDS-D-herbacea_F_contig114:338726..3387981622927540.8938286-CDS-D-herbacea_F_contig114:338726..338798Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig114 338727..338798 -
1690790223.807701-CDS-D-herbacea_F_contig114:338726..3387981690790223.807701-CDS-D-herbacea_F_contig114:338726..338798Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig114 338727..338798 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig114.1070.1prot_D-herbacea_F_contig114.1070.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig114 334141..338798 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig114.1070.1

>prot_D-herbacea_F_contig114.1070.1 ID=prot_D-herbacea_F_contig114.1070.1|Name=mRNA_D-herbacea_F_contig114.1070.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=344bp
MRALAESKRKPLKGVRHVTVQPGQRSYLLTGQRGTGKSCVLNHLVLHARS
TGWIVLFVPDGRNLVQKGIYCQPSPVFENLYDLPIQSLKRLKSLRDAHAD
QLKDISIKDPEVLARHEGAKTLLDLVDLGVDNEELAGTVHYDAMRELLAT
TEAKVLLAIDEYNELFQMSHWHYGDNKLEAPDLTATVPLVPAAKTTPTGL
AFADEGLSSVANPEADKQTKKAALPRLDKETGAACLPPPPANGIVVCATS
SRYPPVKKLKKKKTWAPFEDVAGRLAKAVAIPVEPYSRHEMSRVVKQYSN
VEQVLPEPLSEVEFAKLHAKSNGLAEWVFNTCQSAHYRVFVPE*
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mRNA from alignment at D-herbacea_F_contig114:333958..338804-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig114.1070.1 ID=mRNA_D-herbacea_F_contig114.1070.1|Name=mRNA_D-herbacea_F_contig114.1070.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=4847bp|location=Sequence derived from alignment at D-herbacea_F_contig114:333958..338804- (Desmarestia herbacea DmunF female)
GGGGAGATGAGGGCGTTGGCGGAGTCGAAGCGGAAACCGCTGAAGGGCGT
TCGTCATGTCACGGTGCAGCCGGGTCAGGTGCGTGTTTGCGTGGGATATG
GTGTGGTGTGGTGTGGTGTGTTGTGGTTGGCTTGTCGCAGTGGCTACCTG
TGCTATCTGCAGTGCCATTGGAAACGACTCTGATATGTTGGAGAGGCAAC
CATTGCTCGCTGTACGACTTGCTGTACGTTACGTTTGTACTTCAATGCGC
CACCCCACGAACACCGTTACTGAGAGGCACACACAGTGGACAACAGCAAA
GTATGCCCAGGATAGTCCGTTTGAGATGGCGGAGTTTGAATGTGGTCGGG
CCCTCGAGACACGCGTACCTCTAAATGCATGCATGCTATTCTTGTGCAAT
TTTTGTAAGCTCCCTACCCGCATGCCTTGCCTTGTCGTGCTTTTTCAGCG
TTCGTACCTGCTGACTGGACAGAGGGGTACAGGCAAGAGTTGCGTCCTCA
ACCACCTTGTGCTGCACGCCAGGTAAGGGTAACGTACCCCCCCCCCCCTC
TGTGTTTTTGGATTGTGCCGCAAACTGAGAGCCGACCTCGGAAAGCGGCA
AACGTCGACGTACACATGCGTGCCACCAAGCGCCTCCCCCTATTTGATAC
GCGTTTTTCTTCGCTGCTGCGGGCGTCTTGATTTATCCGTGTATGTATGT
GTGTGTGTGTGTTTTACGTCGCAGGTCTACGGGGTGGATTGTGCTGTTCG
TACCCGACGGGAGGAACCTGGTGCAGAAAGGTATCTATTGCCAGCCGTCC
CCTGTGTTCGAGAACTTGTACGACCTCCCGATCCAGGCGAGTTCATTCTC
TGTTGTTATTTGTGATACCCTATTGTACGAGCCCCGTGCGCGCGTACCGC
TTGTGACGTCCTGCTTCTTAGGAACGTAATGATTTGGGTGAGCGGGCGAT
GCTAAACAGCTGCACCTTATGCAAGCATCTGAGATGTATTGGGTGGCAGC
CTGAACTTTTCTCGTGAAACTGTCCGTACCAGCCTTGTCGTCGTTTGGCG
ATTTTGTTTTTGCAGACCTTGATTTCGACACAGGCATTGTTGCCTCCTAC
AACGCTCTGTCGTCGACTTCCCTGCCAATCCCTTGTCTCCTGTCCTCTGC
GTCACGCCACGTTTTTGTTACCGCCGACTACCCGCCCCCCGCCAGTCGCT
TAAGAGACTCAAGTCCTTGCGGGATGCGCATGCCGATCAACTGAAAGACA
TCAGCATCAAGGATCCTGAGGTAAGCTTTCGGGGATGGTACTACCTTTCC
TACTACTGTGGGTGATGTAATTGGTTGCTTAGACATCCAGAGTTTTTGCG
GGCACCTACCCTGCTCCGCGAATTTCTGGTTAGCTTTCTTGTACGACCGT
TGTGGCATGCCGTAGGCGCGTGGTTGTGGCGAATAAACCCGTCGGGATTG
TGTTAGTTGCATTACACCCATACTCACTGCGTCGCGTAGGCGGTGTGGAG
TGCAGTGTGTTGAACAGACTGCATGTACTACTCCAGATATTATGTACCAC
GAATTGTATTTGGTGGGTAGGGACGTCTGCAGCGTAGTTTGCCGCATCGC
AGCGTGTGGTGAATCAGCGCTGACAAGGAGAGACCCAACGCGCTGACAGC
CTTGAGATTGACGTCGCGTTCGCCGTCGACGATGCCCGCTCGCTTGTAAC
TGTATGCAGGTGCTCGCCAGACACGAGGGCGCGAAGACGTTGCTGGATCT
GGTGGACCTAGGTGTCGACAACGAGGTAATATTATTAGCTGTACGAGGGA
AGTAGAAGCGTTTGGTCGTTTGTCGGGCCGGCTGGGGCGCGTGATTGTTG
TTGTGGGCAGCTTCGGGATGCGTCGTGGTTGCGTTTTTCGCGGGCCAGTG
GGGTGTAGTACGGGCTGCCAGAGAACGGCAGGGCGCAACGAGTGCTTGTT
GTGCTACCGATATAGGTCATGCCGTGTATGACGCTTTTTTTATTGGTTTT
TCAAATCGCTCATTGGCTGGTTTGTGCCGCGCGTGTGGGGGTTGGATGTG
CCAGTGGAGGCCCACCCCAACACTATCGCGCTCTCGTGCGCGGGTCTTGT
GGATTTTTCCACACGGAGGACGTTCGCACGGAGGGAGGGGGGGAGTCTCG
TGCTTCTCGGGGATACAATGTCAATGATATGATGAAGTTGCCACAGATTA
CGCTTGACGCCTACGTGGGGAGGCATGCGTTATCCTGGGAGGTGGGAGGT
GACACCCGCTGTGCAAACGGTTTGCTTGCAGGAATTGGCGGGCACCGTGC
ATTACGATGCTATGAGGGAGTTGCTGGCAACGACAGAGGCGAAGGTGCTG
CTGGCCATCGACGAGTACAATGAGCTTTTCCAGATGTCCCACTGGCACTA
CGGCGACAACAAGGTGAGAGACTTAGGAAATAGGGGGGAGAATGAGCATT
CAGAGAAGTGTATGGCGTGGCATAAAACTTTGCGGGCGGGCTACTTCCTC
ACATGTTCAACTGGGGCGGCAAGTGTCGTTTTTGCTTTAAATGCTGTTTT
TTTTGTGAGTTTGTGTGCTTTGTGCTGGCCTGCAGTTTTCGTTCTGGGGG
TCCAACTCTACGCGTTGTCGCCATTGCAACGATACACGCCGTCGGCGCGC
GTGATGACAGAGGGCGACGTACACCGAGCAGAATTTTTATTTGGTTTGTC
AAACTTGACTCGCTTACTGTAGGCGCACGCACCACAAGCTCGTTTATGGC
AGATTCTATTTACCGTCTACCTGCTGATAAGAGCGTGTGTGCTTTCATCG
GACACGTCTCACTCAACCATGATAGGGCGCGTCACTCTTAACCTATGAAG
TCAACACGAGGCCTTCAAATAAATAGCCCACCTATATTATGCAAACCCCT
CAATAGTGAAACACGATGCGTTCGAGACCTTCAAGATAAATAACCCCGCC
ATAATAAACCCCTCAATCATGAAACATGATGCGTTTGAGGCCTTCAGAAT
AAACAACGCCCCTTTATTATGCATCCCCCGGCCGCCGTGGTTTCCCATGA
CAGTTGGAGGCGCCGGACCTCACAGCCACAGTTCCTCTCGTTCCCGCTGC
AAAGACCACGCCCACGGGGCTAGCGTTTGCCGACGAAGGACTGTCGTCCG
TGGCCAACCCCGAGGCTGACAAGCAGACGAAGAAAGCCGCGCTGCCGCGC
CTGGACAAGGAAACAGGGGCCGCGTGCCTGCCGCCCCCACCTGCCAACGG
CATCGTCGTGTGCGCTACGTCGAGTCGTTATCCGCCCGTGAAGAAGCTCA
AAAAGAAGAAGACGTGGGCGCCGTTTGAGGATGTGGCCGGCAGACTGGCC
AAGGCGGTGGCGGTGAGGGTTCTCTCATGGTGTTATAAAGCAGTTAGTAG
TAGTATTGGAAATTATGTTTTTATGCTGTTTTGCGTGCTCGTACATTTTG
TTAAAAAAAAAAATAGTATGACGACTCCTGGATGTTGAGGTGTCGAGCTT
GAGTGAAGGCAACATGAAGGAGCTGCTTGTTGTCCGAGGCGTGTCTCTAT
GCTGTTGCTGTGATGACGGGGAGCCGCACGAAATGACGTGTGCCTGGCGT
AACGATGAGACCAGCGCGGCAAGCGTTGCACTACTACTGTGTTTGATGTG
TCGGGGTATAGAGTCTATGTACGTCGTCTCGCCTGGCCTGATACAACTTT
GACTTTCGTTTCAATTGCGTACAGAGTTTAAACTTGGAGCGACAAGGTTG
AGAAGCGTGCCAGATTTGGCGGGTTCTGTCTTGTGTAGTGCCGTCTTACG
TCCTACAATAGCGAGTCGGGCCTCGTCGTTTTGCGTGCTTGTCTTGGTCC
GTGACGTCTTACAACAGTGAGTCAGACCGCTTGAGTCTTGGCGTGTGAGG
GAATGTGATTTGTTTTTGTCTTGTGTAGGTATGACGGTGCCCGGGCGCGG
CAGTAGATAACCCTGTGATAGTGTTGGGGCAACTCCTGAACGAGCGCAAA
TTTACGCTGATGCCCTCGGTTGGTTGCCACCCTCTTATCCCTTCCCATGA
CTGGCAGATCCCAGTCGAGCCTTATTCCCGTCACGAGATGTCGCGCGTGG
TGAAGCAGTACAGCAACGTAGAACAGGTCCTCCCAGGTGAGACGAAAATT
GCGAGATTGACCCGTTTTTTTATTTTGGGGGTGGGGACATGGCGAGGGGG
GTGAGTGCTTATTTACGTACTGTAGTTTCACCGCTCGGCCATTCGACAGT
TGGCCGTGCTTCGCTGGAGTCATGCCGAGGTTTTAGGACAATGAGGCGTT
ACACACATGATACACGTACTCCAACGGGCAAACATGTGTACGAGTTGACA
ACAGTTTCGCACAAAGTGCGATAGTTATAGACGGGCTCACGGTGACCGTT
TTTTTTTTCTTCTTCAAAACAGCCTTGTAGAGCTCTGCACACGTTATACA
AACACTACTCGTAGGGGTTACGATGTAACACCGCGGCTCGTGCCGCTGTC
CGCGAAACTCCGATTGTTGTTTGCCGGGAAACGATGCGCTTTGCCGTGCA
GAGCCCCTGAGCGAGGTGGAATTCGCCAAGTTGCACGCCAAGTCGAACGG
TCTCGCGGAGTGGGTGTTCAACACCTGCCAATCAGCTCACTACCGCGTGT
TTGTTCCCGAATGAGGCATTATCGACGTAACTGCCGTCGCATTTTGGGCG
GAGGCACGTGTTGCGCCACGTCACTAAAGCGGGTTCGTTCCCAATGAGTC
ATTATCGATGTAGCTGCCGTCGCCTTTAGGGCGGAGGCACGTGTGGCGCC
ACAGTGGAGCGTGCCTTTTTTTTGCTTTTTTTTTTATAGGTCCGTGG
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Coding sequence (CDS) from alignment at D-herbacea_F_contig114:333958..338804-

>mRNA_D-herbacea_F_contig114.1070.1 ID=mRNA_D-herbacea_F_contig114.1070.1|Name=mRNA_D-herbacea_F_contig114.1070.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2064bp|location=Sequence derived from alignment at D-herbacea_F_contig114:333958..338804- (Desmarestia herbacea DmunF female)
ATGAGGGCGTTGGCGGAGTCGAAGCGGAAACCGCTGAAGGGCGTTCGTCA
TGTCACGGTGCAGCCGGGTCAGATGAGGGCGTTGGCGGAGTCGAAGCGGA
AACCGCTGAAGGGCGTTCGTCATGTCACGGTGCAGCCGGGTCAGCGTTCG
TACCTGCTGACTGGACAGAGGGGTACAGGCAAGAGTTGCGTCCTCAACCA
CCTTGTGCTGCACGCCAGCGTTCGTACCTGCTGACTGGACAGAGGGGTAC
AGGCAAGAGTTGCGTCCTCAACCACCTTGTGCTGCACGCCAGGTCTACGG
GGTGGATTGTGCTGTTCGTACCCGACGGGAGGAACCTGGTGCAGAAAGGT
ATCTATTGCCAGCCGTCCCCTGTGTTCGAGAACTTGTACGACCTCCCGAT
CCAGGTCTACGGGGTGGATTGTGCTGTTCGTACCCGACGGGAGGAACCTG
GTGCAGAAAGGTATCTATTGCCAGCCGTCCCCTGTGTTCGAGAACTTGTA
CGACCTCCCGATCCAGTCGCTTAAGAGACTCAAGTCCTTGCGGGATGCGC
ATGCCGATCAACTGAAAGACATCAGCATCAAGGATCCTGAGTCGCTTAAG
AGACTCAAGTCCTTGCGGGATGCGCATGCCGATCAACTGAAAGACATCAG
CATCAAGGATCCTGAGGTGCTCGCCAGACACGAGGGCGCGAAGACGTTGC
TGGATCTGGTGGACCTAGGTGTCGACAACGAGGTGCTCGCCAGACACGAG
GGCGCGAAGACGTTGCTGGATCTGGTGGACCTAGGTGTCGACAACGAGGA
ATTGGCGGGCACCGTGCATTACGATGCTATGAGGGAGTTGCTGGCAACGA
CAGAGGCGAAGGTGCTGCTGGCCATCGACGAGTACAATGAGCTTTTCCAG
ATGTCCCACTGGCACTACGGCGACAACAAGGAATTGGCGGGCACCGTGCA
TTACGATGCTATGAGGGAGTTGCTGGCAACGACAGAGGCGAAGGTGCTGC
TGGCCATCGACGAGTACAATGAGCTTTTCCAGATGTCCCACTGGCACTAC
GGCGACAACAAGTTGGAGGCGCCGGACCTCACAGCCACAGTTCCTCTCGT
TCCCGCTGCAAAGACCACGCCCACGGGGCTAGCGTTTGCCGACGAAGGAC
TGTCGTCCGTGGCCAACCCCGAGGCTGACAAGCAGACGAAGAAAGCCGCG
CTGCCGCGCCTGGACAAGGAAACAGGGGCCGCGTGCCTGCCGCCCCCACC
TGCCAACGGCATCGTCGTGTGCGCTACGTCGAGTCGTTATCCGCCCGTGA
AGAAGCTCAAAAAGAAGAAGACGTGGGCGCCGTTTGAGGATGTGGCCGGC
AGACTGGCCAAGGCGGTGGCGTTGGAGGCGCCGGACCTCACAGCCACAGT
TCCTCTCGTTCCCGCTGCAAAGACCACGCCCACGGGGCTAGCGTTTGCCG
ACGAAGGACTGTCGTCCGTGGCCAACCCCGAGGCTGACAAGCAGACGAAG
AAAGCCGCGCTGCCGCGCCTGGACAAGGAAACAGGGGCCGCGTGCCTGCC
GCCCCCACCTGCCAACGGCATCGTCGTGTGCGCTACGTCGAGTCGTTATC
CGCCCGTGAAGAAGCTCAAAAAGAAGAAGACGTGGGCGCCGTTTGAGGAT
GTGGCCGGCAGACTGGCCAAGGCGGTGGCGATCCCAGTCGAGCCTTATTC
CCGTCACGAGATGTCGCGCGTGGTGAAGCAGTACAGCAACGTAGAACAGG
TCCTCCCAGATCCCAGTCGAGCCTTATTCCCGTCACGAGATGTCGCGCGT
GGTGAAGCAGTACAGCAACGTAGAACAGGTCCTCCCAGAGCCCCTGAGCG
AGGTGGAATTCGCCAAGTTGCACGCCAAGTCGAACGGTCTCGCGGAGTGG
GTGTTCAACACCTGCCAATCAGCTCACTACCGCGTGTTTGTTCCCGAATG
AAGCCCCTGAGCGAGGTGGAATTCGCCAAGTTGCACGCCAAGTCGAACGG
TCTCGCGGAGTGGGTGTTCAACACCTGCCAATCAGCTCACTACCGCGTGT
TTGTTCCCGAATGA
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