mRNA_D-herbacea_F_contig113.1041.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig113.1041.1 vs. uniprot
Match: A0A6H5JJ53_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJ53_9PHAE) HSP 1 Score: 1537 bits (3980), Expect = 0.000e+0 Identity = 924/1255 (73.63%), Postives = 1005/1255 (80.08%), Query Frame = 1
Query: 1 LLKSQHNSIGTALHAIDTTGTAINDRVGGVGGVAHASVGGVVGTA----LPQRRASASGPVGR---------SNGGPRGGPSGFDSSTSQGG--------GTILPRRTSTSNLPSMTGGXXXSGGMFDSVTTVGTPGSITGDASKTPVARGLARAATARPPDRG-GNMRALAS-------NGANGGAAIASRKPPKDLREAIEAGDVLAVGSFVRAMSQEDAEVELVAQDREQGTPLMQAAAGKNAQTYKAVMDAIRSRLGVETLMSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTAKYGWTPLHAAARGNAEAMSAVMTSLVNYMEADELKEQLSQSQDKESDLPTPLMFAAASSSLDSRSLSPLLSELLGCMCDIDEARRQRTAVDYAAAYGRLDTLSCLIAYGCEISDQTVTTLLSGDLAVGASAFNRCIWKGITTARNPLIPAHNVLRAVGRAAERDAKHRQFLLRMQSDVDELVQEMLQQLLPNMADFSDNHMDTGQGFAGVQWLLEPEMAGKRIPTFTGPLARALETRRLEFFSTNIVLAYVSRKFSRGLPGIFSGASWRMPDMHNRDTKRFVLGLPYGAAPDNVVGAVRMRMCVPFELIQGSALRRTSLIPGLQFNCVGLASRPDAFYEVPAVRMAFDVVTYLSMLALFCFVVKLDSPTSLPVQEIAFYAYMLGTMVNELGEARYLRKLRGQSELWNVVEAVLLGLVCAAFTARMIALWSTVVQEEAFFLAQLFFAIAAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGVVLLGFAMAMFALFGGTPPEVGEEDSPSTTSQEEDEGTT-GLLSVDPWG-RFLQTGDSADP-TLDPSTLDISEIYLPSFSTFSESALTMFRAMFGDFDFDEFSGVRYGPAGVGLMVAFLTIMGIMLLNLLIAFLSGAHADVKKQAKAKFHFTRTQIVQHWDRVVEHDVLPAPLNLVHRSMCLLLKLCVSKRRYPDMQTRIGCLLFWLVMGPLGAFLAIAMWFVSLPWSIWTLLFGGQAGKEVDRKSERLKYVVTAPGLVIIALMLGFLTIFVGDGSTDGPSGGRGLSSSRSARKDKLQRGGDYDLSGLLKKLANIGVDDLRRQLKNPLKDSQ-------VLPRDAKLGTTVEHVKHLRDDITSTTAHCFKEGIQDVTKQAEDRALRLEARMGSLEITLSKIQLMLEKAQAQQGAGA--------NEKAIGSGFNGSTVSGSRSTGSHTGSQ 3624
+ + Q S+GTALHAID T + G A A+ G + + RR+S +G VG SNGG G + + + G GT L RR ST L +M +G F+S+TT+GTP G + ++RGLARAA R + G G R AS NG GGA R+ P DLR AIEAGDVLAVGS VR MSQE+AEVELVAQDREQGTPLMQAAAGKN QTY AVMDAIRSRLGVE LM+EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TAKYGWTPLHAAARG M AVMT+LVNYMEADELKEQLSQS DK+SDLPTPLMFAAASSSLDSRSL+PLLSELLGCMCDIDEARRQRTAVDYAAAYGRLDTLSCLIAYGCEISDQTVTTLLSGDLAVGA+AFNRCIWKGITTARNPLIPAHNVLRAV RAA+RDAKHRQFLLRMQSDVDELVQEMLQQL PNMA F+DN+MDTGQGF VQWLLEPEM GKRI +FTGPLARALETRRLEFFSTNIVLAYVSRKFSRGLPG+FSGASW+MPDMHNRDT+RFVLGLPYGAAPDNVVGAVRMR+CVPFELIQGSALRRTSLIPGLQFNCVGLASRPDAFYEVPAVRMA DVVTYLSML LFCFVVKL+SPT +P +E+AFY YMLG MVNELGEARY+RKLRGQSELWNVVEAVLLGLVCAAFT RM+A S V++EEAFFLAQLFFA+AAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGV+LLGFAMAMFALFGG+ P + T G+L D G R L T D TLDP + DISEIYLPSFSTF ESALTMFRAMFGDFDF+EF+GVRYG AGVGLMVAFLT+MGI+LLNLLIAFL+GAH++V+ QAKAKFHFTRTQIVQHW+RVVEHDVLP+PLNLVH + C+LLK CV K +YP + RIGC LFWLVMGPLGA LAIAMWFVS+PWSIW LLFGGQA KEVDRKSERLKYV+TAPGLV+IAL LG LTIFVGDGS+DG SG G SSR+ RKDKLQRGGDYDL+GLLK+LANIGVDDLRRQLKNPLKDSQ VLPRDAK+GTTVEHVK LRDDIT TTA+ F+E ++ K A+DRA RLEARM SLEI L+KI +LE G +A S N SG RS GS G+
Sbjct: 223 MYRHQAESVGTALHAIDRVQTISAAKSQRPGAAAAAAAGRLXXXXXXXXIGSRRSSHTGSVGVGRKGGSGPISNGGV--GSARVSAEAAANGNAAVAAVAGTALVRRVSTGQLNNMAS----TGSNFESMTTIGTPSGSGGGVNS--ISRGLARAAGLRSGNDGLGRARHSASSNNLAVSNGV-GGAIADKRELPTDLRSAIEAGDVLAVGSMVRTMSQEEAEVELVAQDREQGTPLMQAAAGKNVQTYTAVMDAIRSRLGVEALMNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAKYGWTPLHAAARGXXXXMGAVMTALVNYMEADELKEQLSQSHDKDSDLPTPLMFAAASSSLDSRSLNPLLSELLGCMCDIDEARRQRTAVDYAAAYGRLDTLSCLIAYGCEISDQTVTTLLSGDLAVGAAAFNRCIWKGITTARNPLIPAHNVLRAVSRAADRDAKHRQFLLRMQSDVDELVQEMLQQLPPNMAGFADNYMDTGQGFEAVQWLLEPEMGGKRISSFTGPLARALETRRLEFFSTNIVLAYVSRKFSRGLPGVFSGASWKMPDMHNRDTRRFVLGLPYGAAPDNVVGAVRMRLCVPFELIQGSALRRTSLIPGLQFNCVGLASRPDAFYEVPAVRMACDVVTYLSMLILFCFVVKLESPTKIPAKEVAFYVYMLGNMVNELGEARYVRKLRGQSELWNVVEAVLLGLVCAAFTFRMVAFGSDVIEEEAFFLAQLFFAMAAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGVILLGFAMAMFALFGGSAPSLDXXXXXXXXXXXXXXXDTEGVLWFDRGGARGLLTSSGDDSATLDPMSFDISEIYLPSFSTFPESALTMFRAMFGDFDFNEFAGVRYGSAGVGLMVAFLTVMGIVLLNLLIAFLTGAHSEVRSQAKAKFHFTRTQIVQHWNRVVEHDVLPSPLNLVHLATCVLLKPCVPKSKYPLLMMRIGCFLFWLVMGPLGAALAIAMWFVSIPWSIWHLLFGGQASKEVDRKSERLKYVITAPGLVMIALFLGLLTIFVGDGSSDGTSG-LGKHSSRNCRKDKLQRGGDYDLAGLLKRLANIGVDDLRRQLKNPLKDSQARPHTSQVLPRDAKMGTTVEHVKQLRDDITLTTANSFRESFRESGKMADDRAARLEARMSSLEIHLAKIAALLENGNTYNAGGGXXXXXXITTARATSSSNN---TSGYRSGGSQLGAS 1464
BLAST of mRNA_D-herbacea_F_contig113.1041.1 vs. uniprot
Match: A0A6H5KIV5_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIV5_9PHAE) HSP 1 Score: 197 bits (502), Expect = 5.940e-48 Identity = 233/854 (27.28%), Postives = 362/854 (42.39%), Query Frame = 1
Query: 1156 LDTLSCLIAYGCEISDQTVTTLLSGDLAVGASAFNRCIWKGITTARNPLIPAHNVLRAVGRAAERDAK-HRQFLLRMQSDVDELVQEMLQQLLPNMADFSDNHMDTGQGFAGVQWLLEPEMAGKRIPTF---------------TGPLARALETR-RLEFFSTN-IVLAYVSRKFSRGLPGIFSGASWRMPDMHNRDTKRFVLGLPYGAAPDNVVGAVRMRMCVPFELIQGS--ALRRTSLIPGLQFNCVGLASRPDAFYEVPAVRMAFDVVTYLSMLALFCFVVKLDSPTSLPVQEIAFYAYMLGTMVNEL-----GEARYLRKLRGQSELWNVVEAVLLGLVCAAFTARMIALWSTVVQEEAFFLAQLFFAIAAPLFFSRVLFLAQIDENLGLMVQ------------------ILFRMLKEVVRFGVVIGVVLLGFAMAMFALFGGTPPEVGEEDSPSTTSQEEDEGTTGLLSVDPWGRFLQTGDSADPTLDPSTLDISEIYLPSFSTFSESALTMFRAMFGDFDFDEFSGVRYGPAGVGLMVAFLTIMGIMLLNLLIAFLSGAHADVKKQAKAKFHFTRTQIVQHWDRVVEHDVLPAPLNLVHRSMCLLLKLCVSKRR----YPDMQTRIGCLLFWLVMGPLGAFLAIAMWFVSLPWSIWTLLFGGQAGKEVDRKSERLKYVVTAPGLVIIALML---------GFLTIFVGDGSTDGPSGGRGLSSSRSARKDKLQRGGDYDLSGLLKKLANIG----------VDDLRRQLKNPLKDSQVLPRDAKLGTTVEHVKHLRDDITSTTAHCFKEGIQDVTKQAEDRALRLEARM-GSLEITLSKIQLMLEK 3516
+ SCLI +G + + V+ L G A G A +C + +A NPL+ + + AA + RQ LR+Q++V++LV E+ ++L + F + + G G + PE R T +GPL AL+ R +LE F T +VL Y++R F+RGLPG+ + + + + + A G V + E+++GS L +L G QF + +RP Y VPAVRMA D++ YL MLALF V ++ V E+ F+ Y+LG ++ E+ G Y++ + WN ++ L AF R V + + + APL R LF AQ G M++ I+F + E++RF ++ V ++GFAM+ FALF + VG + +TS G + + F + ++PS E +L ES + F+G+ G L+ A+ +MGI+LLNLLIA LS A+ DVK+ + TRT +++H+ + V+ D+LP PLNL+ ++ L L S + + G +LFW V G +W +S P ++ +F + R S + V G+ + LML G L + DG GG R D +R +D + K L G V LR L NP+KD V + TTVEHVK LRD++T E + ++ A R LE M G ++ K+ + EK
Sbjct: 154 VSVFSCLIKHGAAPTPRQVS--LVGRKA-GFEAARKCFLDAVCSAVNPLLVGMRLSLLLADAAGMGNEGQRQVALRLQNEVEDLVLEVFERLPQTVDGFREGDVG-GSGMDACSVVFAPEKIRPRDETIPSHLFQDGTGGTRVDSGPLEMALQARHQLELFCTQPLVLDYLNRAFTRGLPGLDASETGAQEADQFKLLMQRNASVQVNAGDGESSGEVSREL---LEVLEGSHSVLGSLTLSAGKQFILAQVVARPAFSYSVPAVRMAVDLLVYLLMLALFAKDVLWYKEGTVEVGEVVFFVYVLGAILVEITELWDGREEYMK------DHWNALDVAALAFCGGAFLVR--------VYDPESLWGRALYCAGAPLLLFRTLFFAQFMPAQGPMIEVKEARGYPSFLRDLGLSLIIFSLAGELLRFCTILLVTMMGFAMSFFALFRHSCT-VGSFQTYWSTSIALLRAMLGETKL--YDDFTVAAECCYDAVEPSDEFHCEDFLMECCHSVES--------------EHFNGL----VGKALLAAYNVVMGIILLNLLIAVLSEAYVDVKENIDTESKVTRTLVIRHYMKAVDQDMLPPPLNLIQHAVSTLAMLFGSLMGKTGVFRKAEFYSGLVLFWFVSGLFAVLAGSILWAISWPRGVF--MFFLRRSSHSGRVSGSAQLVALFCGVAMPLLMLYKWLWTSTCGALWRHLVDGGAWSNDGGASAGYDE-IRSDGSRRPRPHDDGIIGKTLERYGGTAGQGGALNVHQLREFLANPMKDPVVQRDEETRETTVEHVKLLRDNLTDMVG----ERVGELDAAATARFQSLETSMDGRVDALSEKVDRVDEK 958
BLAST of mRNA_D-herbacea_F_contig113.1041.1 vs. uniprot
Match: D7FLB1_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI) HSP 1 Score: 198 bits (503), Expect = 1.310e-47 Identity = 227/856 (26.52%), Postives = 363/856 (42.41%), Query Frame = 1
Query: 1156 LDTLSCLIAYGCEISDQTVTTLLSGDLAVGASAFNRCIWKGITTARNPLIPAHNVLRAVGRAAERDAK-HRQFLLRMQSDVDELVQEMLQQLLPNMADFSDNHMDTGQGFAGVQWLLEPEMAGKRIPTFTGPLARALETRR-LEFFSTNIVLA-YVSRKFSRGLPGI------------------------FSGASWRMPDMHNRDTKR-------FVLGLPYGAAPDNVVGAVRM---RMCVPFELIQGS---ALRRTSL----IPGLQFNCVGLASRPDAFYEVPAVRMAFDVVTYLSMLALFCFVVKLDSPTSLPVQEIAFYAYMLGTMVNELGEARYLRKLRGQSELWNVVEAVLLGLVCAAFTARMIALWSTVVQEEAFFLAQLFFAIAAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGVVLLGFAMAMFALFGGTPPEVGEEDSPSTTSQEEDEGTTGLLSVDPWGRFLQTGDSADPTLDPSTLDISEIYLPSFSTFSESALTMFRAMFGDFDF-DEFSGVRYGPAGVGLMVAFLTIMGIMLLNLLIAFLSGAHADVKKQAKAKFHFTRTQIVQHWDRVVEHDVLPAPLNLVHRSMCLLLKLCVSKRRYPDM-------QTRIGCLLFWLVMGPLGAFLAIAMWFVSLPWS--IWTLLFGGQAGKE---VDRKSERLKYVVTAPGLVIIA---LMLGFLTI-----------FVGDGSTDGPSGGRGLSSSRSARKDKLQRGGDYDLSGLLKKLANIGVDDLRRQLKNPLKDSQVLPRDAKLGTTVEHVKHLRDDITSTTAHCFKEGIQDVTKQAEDRALRLEARMGSLEITLSKIQLML 3510
+ LSCL+ Y + D LS + + A C + + + NP +P + A ++A + R+ LL +Q VD L+ E+L++L + F G G + EPE++ + GPL AL+ R+ ++ F T +L ++SR+F+ GLPG+ SG + D R + +L L + + R + P L+QG+ L T++ +PG QF GL PD +Y VPA+RM D+ YL ML F VV L E AF Y+L ++ E E R L ++ WN+++ + LGLV R + + +A++APL FSR+LF AQ+ G M+Q++F M E+V+FGVVI VV+LGFAM+ ALFG TF + LT+F+AM G+ DF F G +Y L V +L ++ +MLLNLLIA LS +H+ V+ +A +F ++ +I++H+ VV+ +LP P NLV L+L L V R Q +G + FWL +GP+ A +W +S ++ +W F +A + S ++Y++ V+ A LM +LT +V D P ++S + L G GL+ DL+ L++P+ D +V P + + TTVE++K LR+ + T + + + ++ R+ +E L+ I+ L
Sbjct: 531 IGALSCLLQYPT-MFDTADLIQLSRERS--AEWLRTCFLETVACSDNPFVPGMTLSIAFAKSASVAPEGERRKLLSLQERVDTLLLEILERLPQTVQGFDG-------GMTGCSAVFEPELSREDARGLPGPLRLALQERQHVQTFCTQPLLTDFLSRRFTYGLPGLRDTQNILGDRRELTNLARGGPGELMSGQKYLALDEEGRRKEDGRSLDRCLLLDLQDKIGQEGKLLDSRKIIDTLLSPCILLQGANCAGLWNTAVSLTFLPGAQFTIAGLVGMPDQYYRVPAMRMLLDLAVYLGMLVFFSTVVLFHEDGPLTPGEAAFAFYILAGIITEGQEMRRDFGLYA-ADHWNILDLLGLGLVTGGLIVRC--------ADGDNSWGRALYALSAPLIFSRLLFFAQMLRFHGPMIQVVFSMTAELVKFGVVIIVVMLGFAMSFHALFGDV-----------------------------------------------------------DTFGGTCLTLFKAMLGEVDFFGSFPGNQYDSVATALFVIYLVVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYRMVVDMCLLPPPFNLVQ----LILSLPVMVRDRSGQGTASTRAQEAVGRMAFWLALGPVAAACGTVLWVLSSLFAPFVWHTHFYSKAQARRGALSVGSLLVRYLIVFFWCVLGAPLYLMAFWLTAPMKWLKLRPWCWVWD-RRQAPY----IASWNPKSVNDLLEGNS---GGLV-------AGDLQMYLEDPIGDPEVRPDERRKQTTVENIKQLRNRLEKTILTHLDAKLDSIEQDRASSTDGVQVRLARMEENLAGIRAQL 1289
BLAST of mRNA_D-herbacea_F_contig113.1041.1 vs. uniprot
Match: A0A6H5JMG8_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMG8_9PHAE) HSP 1 Score: 195 bits (495), Expect = 7.700e-47 Identity = 188/637 (29.51%), Postives = 293/637 (46.00%), Query Frame = 1
Query: 1165 LSCLIAYGCEISDQTVTTLLSGDLAVGASAFNRCIWKGITTARNPLIPAHNVLRAV-----GRAAERDAKHRQFLLRMQSDVDELVQEMLQQLLPNMADFSDNHMDTGQGFAGVQWLLEPEMA------GKRIPTFTGPLARALET--RRLEFFSTNIVLAYVSRKFSRGLPGIFSGASWRMPDMHNRDTKRFVLGLPYGAA--PDNVVGAVRMRMCVPFELIQGSALRRTSLIPGLQFNCVGLASRPDAFYEVPAVRMAFDVVTYLSMLALFCFVVKLDSPTSLPVQEIAFYAYMLGTMVNELGEARYLRKLRGQS-ELWNVVEAVLLGLVCAAFTARMIALWSTVVQEEAFFLAQLFFAIAAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGVVLLGFAMAMFALFGGTPPEVGEEDSPSTTSQEEDEGTTGLLSVDPWGRFLQTGDSADPTLDPSTLDISEIYLPSFSTFSESALTMFRAMFGDFD-FDEFSGVRYGPAGVGLMVAFLTIMGIMLLNLLIAFLSGAHADVKKQAKAKFHFTRTQIVQHWDRVVEHDVLPAPLNLVHRSM---CLLLKLCVSKRRYPDMQTRIGCLLFWLVMGPLGAFLA-IAMWFVSLPWSIWTL 3012
LS L+ +G + + L A+ + C+++ + +A+N IP+ N+ A A+ERD R+ L R+Q DVD ++ E L +L + S G A LLEPE A G+R GPLARAL R + F +T + + ++ KF+RGLP + G S + + D + G A P +++G R V L + L + PG F G+ + P+++Y+VP +RMA D + + LA F V L SL + E+AF Y++ ++ E E + L G + W + L + AAF AR I S+ + +A+ +PL + R+L+ AQ+ + G +Q+L+ M E+ +F VV+GVV+LGFAM+ FALF E T + L F+AM G+ FD+F G ++ A L+V++L +M IMLLNLLIA LS AH V++ + +R ++ H+ VV D LPAP NL + C ++ L YP + +G ++FWLV+GP GA L I +W VS P +++ +
Sbjct: 425 LSMLLQHGTKPHPADLVILCR---AIDYEELDECLFQAVASAKNSFIPSLNLSFAFRDAIRSAASERD---RRVLARLQHDVDSILTETLDRLPQTVCGLSG-------GMAACTALLEPEEADDSSTYGER-----GPLARALGCPHRIVTFATTPLCMNFMLLKFTRGLPALNDGHSVLILEKSRLDVREEAKGHESLTALCPGSILGGFLPR--VGKLLWEDDRLAPLTFFPGAHFIATGVVALPNSYYKVPLMRMALDATVFTAALAFFTSRVLLFEKGSLTIAEMAFAIYVVAAIMLEATEMW--KDLAGYLLDRWKAPHFLALVVALAAFLARAIDSDSSWGRG--------LYAVGSPLMYWRLLYYAQVIPSQGSTIQVLYSMASELGQFFVVMGVVILGFAMSFFALFRDVKGE---------------------------------------------------------TLRGALLDAFQAMLGEVGLFDDFVGEKHDLAATVLLVSYLLVMTIMLLNLLIAVLSTAHGKVEEAVLIRV--SRARVYTHYRWVVATDALPAPFNLAQLVVLLPCQMVDLLFKSNTYPIARRGVGRIVFWLVLGP-GAILGGIFVWLVSTPKALFAI 971
BLAST of mRNA_D-herbacea_F_contig113.1041.1 vs. uniprot
Match: D8LM43_ECTSI (Ankyrin repeat Transient receptor potential channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM43_ECTSI) HSP 1 Score: 192 bits (489), Expect = 5.990e-46 Identity = 153/518 (29.54%), Postives = 235/518 (45.37%), Query Frame = 1
Query: 1489 VQWLLEPEMAGKRIPTFTGPLARALETRRLEFFSTNIVLAYVSRKFSRGLPGIFSGASWRMPD----------MHNRDTKRFVLGLPYGAAPDNVVGAVRMRMCVPFELIQGSALRRTSLIPGLQFNCVGLASRPDAFYEVPAVRMAFDVVTYLSMLALFCF-VVKLDSPTSLPVQEIAFYAYMLGTMVNELGEARYLRKLRGQS-ELWNVVEAVLLGLVCAAFTARMIALW-----------------STVVQEEAFFLAQLFFAIAAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGVVLLGFAMAMFALFGGTPPEVGEEDSPSTTSQEEDEGTTGLLSVDPWGRFLQTGDSADPTLDPSTLDISEIYLPSFSTFSESALTMFRAMFGDFDFDEFSGVRYGPAGVGLMVAFLTIMGIMLLNLLIAFLSGAHADVKKQAKAKFHFTRTQIVQHWDRVVEHDVLPAPLNLVHRSMCLLLKLCVSKRRYPDMQTRIGCLLFWLVMGPLG 2955
VQ +LEPE+AG + GPLA+A+++R ++F T +V+ Y+ KFS GLP F WR M N D + ++ + G PD+ + +PGLQF G+A + AF+ VPA+R+A DV+ Y ++++F VV L + ++ + Y++G + ++ E + LR WNVVEA L + AF RM A W +V + +LAQ F A +AP +VLFL Q+ +LG ++ F ++ ++ RFG ++ V+ LGFA+A +A+FG + P DI+E + T+ S LT+F +M G+F F+ F G AG LMV FL +M I LLNLLIA L+ AHA ++ A + + I+ + R + D LP+PLN+ + CV R + +FWLV GP+
Sbjct: 531 VQEMLEPELAGLQPRDCAGPLAQAMQSRHVDFIYTPLVVDYLRLKFSAGLPNPFRETDWRREHGRVDRNLARFMVNEDESQLMVYILQGGCPDSP---------------------SWTYLPGLQFILAGVAGKTAAFFGVPAMRLALDVLVYTGVVSVFVLKVVVLRDVGRITAWDVLWLVYLVGAIWKQVHEVQEAGSLRVHLFNPWNVVEATKLASLSTAFFFRMHA-WVCDGHGEYFCGQLSTGSGSVNELNEVYLAQYFQAASAPFVLGKVLFLTQVHSSLGPLMHSAFNVIGDLTRFGALMLVITLGFALAFYAMFGSMSASL-----------------------------------------PDGGDIAE-----YDTYYSSILTLFSSMLGNFSFEVFKGAPMAEAGEVLMVFFLCVMNITLLNLLIAILATAHARLEGNADKEAVLSEAVIITQYRRAMRLDSLPSPLNVPQELIS-----CVLWRHKERAKEVFARAVFWLVSGPIA 975
BLAST of mRNA_D-herbacea_F_contig113.1041.1 vs. uniprot
Match: D7FR83_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR83_ECTSI) HSP 1 Score: 189 bits (480), Expect = 3.690e-45 Identity = 184/640 (28.75%), Postives = 295/640 (46.09%), Query Frame = 1
Query: 1165 LSCLIAYGCEISDQTVTTLLSGDLAVGASAFNRCIWKGITTARNPLIPAHNVLRAV-----GRAAERDAKHRQFLLRMQSDVDELVQEMLQQLLPNMADFSDNHMDTGQGFAGVQWLLEPEMA------GKRIPTFTGPLARALE-TRRLEFFSTN-IVLAYVSRKFSRGLPGIFSGASWRMPDMHNRDTKRFVLGLPYGAA--PDNVVGAVRMRMCVPFELIQGSALRRTSLIPGLQFNCVGLASRPDAFYEVPAVRMAFDVVTYLSMLALFCFVVKLDSPTSLPVQEIAFYAYMLGTMVNELGEARYLRKLRGQS-ELWNVVEAVLLGLVCAAFTARMI---ALWSTVVQEEAFFLAQLFFAIAAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGVVLLGFAMAMFALFGGTPPEVGEEDSPSTTSQEEDEGTTGLLSVDPWGRFLQTGDSADPTLDPSTLDISEIYLPSFSTFSESALTMFRAMFGDFD-FDEFSGVRYGPAGVGLMVAFLTIMGIMLLNLLIAFLSGAHADVKKQAKAKFHFTRTQIVQHWDRVVEHDVLPAPLNLVHRSM---CLLLKLCVSKRRYPDMQTRIGCLLFWLVMGPLGAFLA-IAMWFVSLPWSIWTL 3012
LS L+ +G + + L A+ + C+++ + +A+N IP+ N+ A A+ERD R+ L R+Q DVD ++ E L +L ++ S G A LLEPE+A G+R GPLARAL T R+ F+T + + ++ KF+RGLP + G S + + D + G A P +++G R V L L + PG F G+ + P+++Y+VP +RMA + + + + LA F V L L + E+AF Y++ ++ E E + L G + W + L + AAF AR I + W + +A+ +PL + R+L+ AQ+ + G +Q+L+ M E+ +F VV+GVV+LGFAM+ FALF E T + L F+AM G+ FD+F G ++ A L+V++L +M IMLLNLLIA LS AH V++ + +R ++ H+ VV D LPAP NL + C ++ + YP + +G ++FWL++GP GA L + +W VS P +++ +
Sbjct: 334 LSMLLQHGTKPHPTDLVILCR---AIDYEELDECLFQAVASAKNSFIPSLNLSFAFRDAIRSAASERD---RRVLARLQHDVDSILTETLNRLPQSVCGLSG-------GMAACTALLEPEVADDSSTYGER-----GPLARALGCTHRIVTFATTPLCMNFMLLKFTRGLPALKDGHSVLILEKSRLDIREEAKGHESLTALCPGSILGGFLPR--VGKLLWDDDRLAPLTFFPGAHFIATGVVALPNSYYKVPLMRMALEAMIFTAALAFFTSRVLLFEKGQLTIAEVAFAIYVVAAIMLEATEMW--KDLAGYLLDRWKAPHFLALVVALAAFLARAIDPDSSWGRGL-----------YAVGSPLMYWRLLYYAQVIPSQGSTIQVLYGMASELGQFFVVMGVVILGFAMSFFALFRDVKGE---------------------------------------------------------TIRGALLDAFQAMLGEVGLFDDFVGEKHDLAATVLLVSYLVVMTIMLLNLLIAVLSTAHGKVEEAVLIRV--SRARVYTHYRWVVATDALPAPFNLAQLVVLLPCKMVDVLFKGNTYPIARRGVGRIVFWLLLGP-GAILGGVFVWLVSTPKALFAI 880
BLAST of mRNA_D-herbacea_F_contig113.1041.1 vs. uniprot
Match: A0A6H5JB40_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB40_9PHAE) HSP 1 Score: 176 bits (445), Expect = 1.380e-40 Identity = 153/513 (29.82%), Postives = 222/513 (43.27%), Query Frame = 1
Query: 1774 PFELIQGSALRR--------TSLIPGLQFNCVGLASRPDAFYEVPAVRMAFDVVTYLSMLALFCFVVKLDSPTSLPVQEIAFYAYMLGTMVNELGE------ARYLRKL---------------------------------RGQSEL------------WNVVEAVLLGLVCAAFTARMIAL---WSTVVQEEAFFLAQLFFAIAAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGVVLLGFAMAMFALFGGTPPEVGEEDSPSTTSQEEDEGTTGLLSVDPWGRFLQTGDSADPTLDPSTLDISEIYLPSFSTFSESALTMFRAMFGDFDFDEFSGV-----------RYGPAGVGLMVAFLTIMGIMLLNLLIAFLSGAHADVKKQAKAKFHFTRTQIVQHWDRVVEHDVLPAPLNLVHRSMCLLLK-----------------LCVSKRRYPDMQTRIGC---------LLFWLVMGPLGAFLAIAMWFVSLPWSIWTLL 3015
P E +G + RR T+++P LQF+ GL +P FY VPAVR A + + YL ML LFC VKL +P E+AFY +M GT+ E+ E AR+ R RG + WN+++ + L V AF R++ + + FF+AQ F A +APL F+R+L L+QID LG M+QI++RML + +RFGV I VV+ GFA+A A+FG D G+ D+ E S+ +F + LT+F+A G+F F++F V R AG L+VA+L ++ +++LNLLIA LS AH +V + +FH RT+++ R V H +P P NLV + LL L K + + G LLF MG + L +W +SLPW W ++
Sbjct: 948 PEEQPRGRSTRRSDRNKLPHTTVLPMLQFSLAGLIGKPAVFYNVPAVRFALEFLHYLVMLGLFCACVKLQDSYRIPPAEVAFYVFMAGTLWREILEFCDGVPARHRRXXXXXXXXXXXXXXXXTAAQWASSKRSDTVDYEQGRGLKRVASAITRYLFYDTWNLLDTLTLSTVFLAFIFRLLGIREFGGPADPGDYFFVAQFFLAASAPLLFARLLRLSQIDSTLGPMIQIIWRMLSQTLRFGVFIVVVMAGFALAFNAVFGSC-----------------DAGS----------------------------DLDE----SYGSFGTAFLTVFKAPLGEFKFEDFDDVGGQCPYNPSPGRASDAGTFLLVAYLVVLAVVMLNLLIAVLSTAHGEVYANGEKEFHLARTRLILQSARAVAHRRIPPPFNLVQLVVGFLLDGVSELAWWAVRGADRCGLRQHKESFAPITYTYGWHTFDGMLQRLLFASTMGLVAVTLNALLWVLSLPWVAWRIV 1411
BLAST of mRNA_D-herbacea_F_contig113.1041.1 vs. uniprot
Match: D8LH99_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH99_ECTSI) HSP 1 Score: 174 bits (440), Expect = 5.600e-40 Identity = 142/486 (29.22%), Postives = 212/486 (43.62%), Query Frame = 1
Query: 1810 TSLIPGLQFNCVGLASRPDAFYEVPAVRMAFDVVTYLSMLALFCFVVKLDSPTSLPVQEIAFYAYMLGTMVNELGE-------------ARYLRKLRGQS-----------------------------------ELWNVVEAVLLGLVCAAFTARMIALWSTVVQEEAFFL--AQLFFAIAAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGVVLLGFAMAMFALFGGTPPEVGEEDSPSTTSQEEDEGTTGLLSVDPWGRFLQTGDSADPTLDPSTLDISEIYLPSFSTFSESALTMFRAMFGDFDFDEFS------------GVRYGPAGVGLMVAFLTIMGIMLLNLLIAFLSGAHADVKKQAKAKFHFTRTQIVQHWDRVVEHDVLPAPLNLVH-----------------------RSMCLLLKLCVSKRRYPDMQTRIGCLLFWLVMGPLGAFLAIAMWFVSLPWSIWTL 3012
++++PGLQF+ G+ +P+ FY+VP +R AF++ +YL ML LFCF V L S+P E+ FY + G + E+ E R + K G + + WN ++ +G + AF RMIAL ++ FFL AQ F+A++APL FSR+L L+QID LG M Q+++RM+ +RF I +V+L FA+A A+F GE P T ++D A P D +F TF +S +T+F G DF+ F G R AG+ L+V ++ M ++LLNLLIA LS H V A+ +FH R +++ RVV P PLNL+ RS +LK + ++ ++ + L F G L+ +W VS+PW W L
Sbjct: 982 STMLPGLQFSLAGIQGKPETFYKVPVIRFAFEIFSYLVMLVLFCFSVLLKEHDSIPWGEVTFYVFAAGLLWREILEFRDGMPARRHKPPKRQVSKNDGSTRTGSEQPLSFPRISRLGTGNRFNRMVSAFTRYVFYDTWNFLDTSTIGCILVAFIFRMIAL------DDKFFLFHAQFFYALSAPLLFSRLLVLSQIDATLGPMTQVIWRMMSHTLRFSAFIAMVMLSFALAFHAVFH----TCGEYSEPQCTLDDDD---------------------AFPLRD------------AFGTFGDSFVTVFTYALGGPDFEAFQLAGSDCRCDLPEGAR--NAGIFLLVVYMITMTVVLLNLLIAVLSTTHGKVYANAEKEFHHARARLIYQSARVVSRSRPPPPLNLIKLVCGILLDAGTEVWRVGVWVTRGRSQARMLKPFSTTHQWKTLEGGLQRLEFAFTFGVAAVGLSTILWIVSVPWVAWCL 1422
BLAST of mRNA_D-herbacea_F_contig113.1041.1 vs. uniprot
Match: A0A6H5KCQ6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCQ6_9PHAE) HSP 1 Score: 162 bits (409), Expect = 7.010e-37 Identity = 184/693 (26.55%), Postives = 296/693 (42.71%), Query Frame = 1
Query: 1102 DEARRQRTAVDYAAAY-GRLDTLSCLIAYGCEISDQTVTTLL------SGDLAV---GASAFNRCIWKGITTAR---NPLIPAHNVLRAVGRAAERDAKH-------RQFLLRMQSDVDELVQEMLQQLLPNMADFSDNHMDTGQGFAGVQWLLEPEMAGKRIPTFTG---PLAR----------ALETRRLEFFSTNIVLAYVSRKFSRGLPGIFSGASWRMPDMHNRDTKRFVLGLPY-----GAAPDNVVGAVRMRMCVPFELIQGSALRR-------TSLIPG---LQFNCVGLASRPDAFYEVPAVRMAFDVVTYLSMLALFCF-VVKLDSPTSLPVQEIAFYAYMLGTM-------VNELGEARYLRKLRGQSELWNVVEAVLLGLVCAAFTARMIALW-----------------STVVQEEAFFLAQLFFAIAAPLFFSRVLFLAQ--IDENLGLMVQILFRMLKEVVRFGVVIGVVLLGFAMAMFALFGGTPPEVGEEDSPSTTSQEEDEGTTGLLSVDPWGRFLQTGDSADPTLDPSTLDISEIYLPSFSTFSESALTMFRAMFGDFDFDEFSGVRYGPAGVGLMVAFLTIMGIMLLNLLIAFLSGAHADVKKQAKAKFHFTRTQIVQHWDRVVEHDVLPAPLNLVHRSMCLLLKLCVSKRRYPDMQTRIGCLLFWLVMGPLG 2955
DE+ Q TA+D AA +L + CL+A G + + V LL G +AV G +A C + + NPLIP N+ A+ A + +H R LL+M++D++ LV +L+ L P+ + D G A +P++ K PT T P+++ A+E + + + ++R + G A+ + D+ + ++ G P + G + E + A++ T L+ L+F G+A + AF+ VPA+R+A DV+ Y ++++F VV L + ++ + Y++G + V+E+ EA LR WNVVEA L + AF RM A W +V + +LAQ F A +AP +VLFL Q + +LG ++ F ++ ++ RFG ++ V+ LGFA+A +A+FG + P DI+E + T+ S LT+F +MFG+F F+ F G AG LMV FL +M I LLNLLIA L+ AHA ++ A + + I+ + R + D LP+PLN+ + CV R + +FWLV GP+
Sbjct: 16 DESEAQLTALDLAARPPAKLGVIKCLLACGAIPTARVVQRLLRTCSEDGGAVAVSGSGLAAVRECFLGAMIASEWAVNPLIPGLNLYTAINAARRQVGRHVKACGAMRNNLLQMKNDINALVLSVLRHL-PDTVEGFDRFSTPAAGNAAGTGAAKPKLGKKTNPTLTPAKLPVSKVSTFEEDHDGAVEEGNATAATKLNLTSTIARGVTAASSGRLEAAAADLDDVPASEVGTSLVQEMLEPELAGLQPRDCAGPLAQARRACGETSKSFAMQSRHVDFIYTPLVVDYLRLKFILAGVAGKTAAFFGVPAMRLALDVLVYTGVVSVFVLKVVVLRDVGRITAWDVLWLVYLVGAIWKQVWMVVHEVQEAGSLRVHLFNP--WNVVEATKLASLSTAFFFRMHA-WVCDGHGEYFCGQLSTGSGSVNELNEVYLAQYFQAASAPFVLGKVLFLTQARVHSSLGPLMHSAFNVIGDLTRFGALMLVITLGFALAFYAMFGSMSASL-----------------------------------------PDGGDIAE-----YDTYYSSILTLFSSMFGNFSFEVFKGAPMAEAGEVLMVFFLCVMNITLLNLLIAILATAHARLEGNADKEAVLSEAVIITQYRRAMRLDSLPSPLNVPQELIS-----CVLWRHKERAKEVFARAVFWLVSGPIA 653
BLAST of mRNA_D-herbacea_F_contig113.1041.1 vs. uniprot
Match: D8LH97_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH97_ECTSI) HSP 1 Score: 161 bits (407), Expect = 3.230e-36 Identity = 121/395 (30.63%), Postives = 182/395 (46.08%), Query Frame = 1
Query: 1813 SLIPGLQFNCVGLASRPDAFYEVPAVRMAFDVVTYLSMLALFCFVVKLDSPTSLPVQEIAFYAYMLGTM---------------------------------VNELGEARYLRKLRGQS------ELWNVVEAVLLGLVCAAFTARMIALWSTVVQEEAFFLAQLFFAIAAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGVVLLGFAMAMFALFGGTPPEVGEEDSPSTTSQEEDEGTTGLLSVDPWGRFLQTGDSADPTLDPSTLDISEIYLPSFSTFSESALTMFRAMFGDFDFDEFS------------GVRYGPAGVGLMVAFLTIMGIMLLNLLIAFLSGAHADVKKQAKAKFHFTRTQIVQHWDRVVEHDVLPAPLNLV 2844
+++PGLQF+ G+ +P+ F++VP +R +++ +YL ML LFC V L P +P E+ FY + G + ++ LG ++ + WN ++ + + AF RMIA + + E F AQ F+A++APL FSR+L L+QID LG M Q+++RM+ ++RF I +V+L FA+A A+F GE P T ++D A P D +F TF +S LT+F + G +FD F G R AG+ +MV + M ++LLNLLIA LS AH +V A+ +FH R ++V R V H P PLNLV
Sbjct: 857 TILPGLQFSLAGILGKPETFFKVPVIRFVYEIFSYLVMLVLFCSSVLLKEPDFIPRDEVIFYIFAAGLLWREVLEFLDGVPTRRHRTSGGPRTEEGGRVEPGISHLGAGSNFNRMVSAFTRYVFYDTWNFMDTSTICCIFVAFIFRMIARFDS---EFDLFYAQFFYALSAPLLFSRLLVLSQIDATLGPMTQVIWRMMSHMLRFSAFIAMVMLSFALAFHAVFH----TCGEHSEPQCTLDDDD---------------------AFPLRD------------AFGTFGDSLLTVFSSALGGPEFDLFDDAGSDCRCNLPRGAR--SAGISMMVVYTITMSVVLLNLLIAVLSTAHDEVYVNAEKEFHLARARLVVQSARSVAHRRPPPPLNLV 1209 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig113.1041.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig113.1041.1 >prot_D-herbacea_F_contig113.1041.1 ID=prot_D-herbacea_F_contig113.1041.1|Name=mRNA_D-herbacea_F_contig113.1041.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=1119bp MTGGGGGSGGMFDSVTTVGTPGSITGDASKTPVARGLARAATARPPDRGGback to top mRNA from alignment at D-herbacea_F_contig113:738394..766358- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig113.1041.1 ID=mRNA_D-herbacea_F_contig113.1041.1|Name=mRNA_D-herbacea_F_contig113.1041.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=27965bp|location=Sequence derived from alignment at D-herbacea_F_contig113:738394..766358- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig113:738394..766358- >mRNA_D-herbacea_F_contig113.1041.1 ID=mRNA_D-herbacea_F_contig113.1041.1|Name=mRNA_D-herbacea_F_contig113.1041.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=6714bp|location=Sequence derived from alignment at D-herbacea_F_contig113:738394..766358- (Desmarestia herbacea DmunF female)back to top |