mRNA_D-herbacea_F_contig1113.967.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig1113.967.1
Unique NamemRNA_D-herbacea_F_contig1113.967.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
BLAST of mRNA_D-herbacea_F_contig1113.967.1 vs. uniprot
Match: A0A6H5L580_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L580_9PHAE)

HSP 1 Score: 262 bits (670), Expect = 9.200e-80
Identity = 143/259 (55.21%), Postives = 182/259 (70.27%), Query Frame = 1
Query:    1 MEELVNTPMEPGQNPDDYFNQKRLLRIRTEKMGERISDRYFKDICVTGFTDNYKDVKMMMYRDPSFDVDQMQTTMRHMFLDEQSRNGTKGRIAGRGSVMTAVTSEQDIICYWCKNRGHSKKDCPKFKSR----TKPAGAAKWCSVHRTTTHRNEECYSQGATRP--TKNAS-VSLACTNCGHCTSADSKELTVDNTEPSHSDKPVINFAGSSDDFDGGFVYA--AGMPGR-FTPSAKGATLLVDSGASESFLDDELIPD 747
            MEEL N PM PG+NPDDYFNQK LLR + +KMGE ISDR FKDICV GF+D YKDVK+M++RDP+F+V  M +TMR++FLDEQSR G KGRIAGRG  M   T+  DIIC+ C   GH +++CPK K+R    TKPAGA KWCS H TT+H +EECY QG  RP  TK+++ V  AC+NC HC+SA  K+        S+++  V++F    D FD GF++A  + + GR F  S+ G  L+VDS ASE+  D+ LIPD
Sbjct:  156 MEELENNPMNPGENPDDYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMLSTMRNIFLDEQSRKGWKGRIAGRGFAM--ATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEECYQQGGKRPEDTKDSNKVFTACSNCTHCSSASKKD-------DSNNEVAVVDFTRDEDAFDSGFMFATCSRISGRNFAASSTGVRLVVDSEASETMFDNRLIPD 405          
BLAST of mRNA_D-herbacea_F_contig1113.967.1 vs. uniprot
Match: D7G6Q1_ECTSI (CCHC-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Q1_ECTSI)

HSP 1 Score: 250 bits (638), Expect = 9.310e-80
Identity = 139/262 (53.05%), Postives = 176/262 (67.18%), Query Frame = 1
Query:    1 MEELVNTPMEPGQNPDDYFNQKRLLRIRTEKMGERISDRYFKDICVTGFTDNYKDVKMMMYRDPSFDVDQMQTTMRHMFLDEQSRNGTKGRIAGRGSVMTAVTSEQDIICYWCKNRGHSKKDCPKFKSR-----TKPAGAAKWCSVHRTTTHRNEECYSQGATRP-TKNASVSLACTNCGHC----TSADSKELTVDNTEPSHSDKPVINFAGSSDDFDGGFVYAAGMPG-RFTPSAKGATLLVDSGASESFLDDELIPDLK 753
            ME+L NT MEPGQNPDDYFN K LLR + EKMGE+ISDRYFKD+CVTGFT  YK+VKM+M+RDP+F+V+ MQTTM HM LDEQSR G+KG IAGRG  M    SEQ+  C+ C  +GH +++C + + +     TKPAGA KWC  H TT + +EECY QGA RP T   S   A + C HC    +++D KELT    + + S K  I+ +   D+ D GF+YA    G     +A+G TLLV+ GA+E+  DD LIP LK
Sbjct:    1 MEKLDNTSMEPGQNPDDYFNHKHLLRHKVEKMGEKISDRYFKDMCVTGFTHEYKNVKMIMHRDPNFNVNHMQTTMHHMALDEQSRKGSKGGIAGRGFPMVTTASEQET-CFGCGEKGHIRRNCLQRRGKGRQRKTKPAGATKWCCFHFTTKNSDEECYGQGAKRPITDQISTDKAFSACAHCAHFSSTSDRKELTT--AKEASSTKAAIDSSTDGDESDEGFMYATTRTGMEVEANAEGVTLLVEIGATETMRDDRLIPHLK 259          
BLAST of mRNA_D-herbacea_F_contig1113.967.1 vs. uniprot
Match: A0A6H5KJB9_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJB9_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 2.260e-77
Identity = 138/263 (52.47%), Postives = 176/263 (66.92%), Query Frame = 1
Query:    1 MEELVNTPMEPGQNPDDYFNQKRLLRIRTEKMGERISDRYFKDICVTGFTDNYKDVKMMMYRDPSFDVDQMQTTMRHMFLDEQSRNGTKGRIAGRGSVMTAVTSEQDIICYWCKNRGHSKKDCPKFK------SRTKPAGAAKWCSVHRTTTHRNEECYSQGATRPTKNASVSLACTNCGHCTSAD----SKELTVDN-TEPSHSDKPVINFAGSSDDFDGGFVYAA----GMPGRFTPSAKGATLLVDSGASESFLDDELIP 744
            +++L  T MEPG+NPDD+FN+K  LR + EKMGE ISDR FKDICV GF+++YKD+KMM++RDPSFDV QMQ TMR++FLDEQ R  TKG+IAGRG  M   TS    IC+ C   GH +++CP  +       +TKPAGA KWCSVH TTTH +EECY+QGA RP +      ACT+C HC++      +K  T +  TE   ++K  I+F+   D F GGF+Y A    G    FT +A G + LVDSGASE+  DD LIP
Sbjct:  136 LDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGP--ICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPERTGKAFSACTHCVHCSTQSRDTHAKPTTTETPTETEKTEKAEIDFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETMFDDRLIP 396          
BLAST of mRNA_D-herbacea_F_contig1113.967.1 vs. uniprot
Match: A0A6H5KW66_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW66_9PHAE)

HSP 1 Score: 252 bits (644), Expect = 4.550e-75
Identity = 142/241 (58.92%), Postives = 168/241 (69.71%), Query Frame = 1
Query:    1 MEELVNTPMEPGQNPDDYFNQKRLLRIRTEKMGERISDRYFKDICVTGFTDNYKDVKMMMYRDPSFDVDQMQTTMRHMFLDEQSRNGTKGRIAGRGSVMTAVTSEQDIICYWCKNRGHSKKDCP----KFKSRTKPAGAAKWCSVHRTTTHRNEECYSQGATRPTKNASVSLA---CTNCGHCTSADSK-ELTVDNTEPSHSDKPVINFAGSSDDFDGGFVYAAGMPGR-FTPSAKGATLL 696
            MEEL+NTPMEP QNPDDYFNQK LLR + EKMGE ISD YF D CVTGFT+ YKDVKM+MYRDP F+VD+MQTTMRHMFLDEQSRNG KG IAGRG  MTA TSE+   C+ C  +GH  ++C     K K +TKPAGAAKWCSVH TT H +EEC+ QGATRP K+++   A   C +C HC S  +K EL +   E S S +  I+F+   +  +G F+YA    G    P A GAT L
Sbjct:  116 MEELINTPMEPRQNPDDYFNQKHLLRHKAEKMGETISDCYFNDECVTGFTNEYKDVKMIMYRDPDFNVDKMQTTMRHMFLDEQSRNGPKGSIAGRGFAMTATTSEEPT-CFDCGEKGHIWRNCSEKRGKGKKKTKPAGAAKWCSVHFTTRHSDEECFEQGATRPKKSSNTGKALSACASCTHCFSTSNKTELAMTKQEAS-STQAEIDFSAEGESEEG-FMYAIVHKGEDLKPMATGATPL 353          
BLAST of mRNA_D-herbacea_F_contig1113.967.1 vs. uniprot
Match: A0A6H5K4S9_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4S9_9PHAE)

HSP 1 Score: 252 bits (644), Expect = 1.410e-74
Identity = 136/263 (51.71%), Postives = 171/263 (65.02%), Query Frame = 1
Query:    1 MEELVNTPMEPGQNPDDYFNQKRLLRIRTEKMGERISDRYFKDICVTGFTDNYKDVKMMMYRDPSFDVDQMQTTMRHMFLDEQSRNGTKGRIAGRGSVMTAVTSEQDIICYWCKNRGHSKKDCPKFK------SRTKPAGAAKWCSVHRTTTHRNEECYSQGATRPTKNASVSLACTNCGHCTSADSKE-----LTVDNTEPSHSDKPVINFAGSSDDFDGGFVYAA----GMPGRFTPSAKGATLLVDSGASESFLDDELIP 744
            +++L  T MEPG+NPDD+FN+K  LR + EKMGE ISDR FKDICV GF+++YKD+KMM++RDPSFDV QMQ TMR++FLDEQ R  TKG+IAGR   M   TS    IC+ C   GH +++CP  +       +TKPAGA KWCSVH TTTH +EECY+QGA RP +      ACTNC HC++          +T    E   ++K  I F+   D F GGF+Y A    G    FT +A G + LVDSGASE+  DD LIP
Sbjct:  136 LDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRVFAMATKTSGP--ICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPERTGKTFSACTNCVHCSTQTGDTHAKPTITEPPKETEKTEKAEIGFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETMFDDRLIP 396          
BLAST of mRNA_D-herbacea_F_contig1113.967.1 vs. uniprot
Match: A0A6H5K3T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3T5_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 1.740e-74
Identity = 137/264 (51.89%), Postives = 175/264 (66.29%), Query Frame = 1
Query:    1 MEELVNTPMEPGQNPDDYFNQKRLLRIRTEKMGERISDRYFKDICVTGFTDNYKDVKMMMYRDPSFDVDQMQTTMRHMFLDEQSRNGTKGRIAGRGSVMTAVTSEQDIICYWCKNRGHSKKDCPKFK------SRTKPAGAAKWCSVHRTTTHRNEECYSQGATRPTKNASVSLACTNCGHCTSADSKELTVDNT------EPSHSDKPVINFAGSSDDFDGGFVYAA----GMPGRFTPSAKGATLLVDSGASESFLDDELIP 744
            +++L  T MEPG+NPDD+FN+K  LR + EKMGE ISDR FKDICV GF+++YKD+KMM++RDPSFDV QMQ TMR++FLDEQ R  TKG+IAGRG  M   TS    IC+ C   GH +++CP  +       +TKPAGA KWCSVH TTTH +EECY+QGA RP +      ACT+C HC S  S+++    T      E   +++  I+F+   D F GGF+Y A    G    FT +A G + LVDSGASE+  DD LIP
Sbjct:  136 LDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGP--ICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPERTGKAFSACTHCVHC-STQSRDIQAKPTTTEIPKETEKTEQAEIDFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETMFDDRLIP 396          
BLAST of mRNA_D-herbacea_F_contig1113.967.1 vs. uniprot
Match: A0A6H5JUN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN9_9PHAE)

HSP 1 Score: 253 bits (647), Expect = 2.460e-74
Identity = 137/264 (51.89%), Postives = 175/264 (66.29%), Query Frame = 1
Query:    1 MEELVNTPMEPGQNPDDYFNQKRLLRIRTEKMGERISDRYFKDICVTGFTDNYKDVKMMMYRDPSFDVDQMQTTMRHMFLDEQSRNGTKGRIAGRGSVMTAVTSEQDIICYWCKNRGHSKKDCPKFK------SRTKPAGAAKWCSVHRTTTHRNEECYSQGATRPTKNASVSLACTNCGHCTSADSKELTVDNT------EPSHSDKPVINFAGSSDDFDGGFVYAA----GMPGRFTPSAKGATLLVDSGASESFLDDELIP 744
            +++L  T MEPG+NPDD+FN+K  LR + EKMGE ISDR FKDICV GF+++YKD+KMM++RDPSFDV QMQ TMR++FLDEQ R  TKG+IAGRG  M   TS    IC+ C   GH +++CP  +       +TKPAGA KWCSVH TTTH +EECY+QGA RP +      ACT+C HC S  S+++    T      E   ++K  I+F+   D F GGF+Y A    G    FT +A G + LVDSGASE+  D+ LIP
Sbjct:  155 LDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGP--ICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPERTGKAFSACTHCVHC-STQSRDIHAKPTTTEIPKETEKTEKAEIDFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETMFDNRLIP 415          
BLAST of mRNA_D-herbacea_F_contig1113.967.1 vs. uniprot
Match: A0A6H5JZ53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ53_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 3.650e-74
Identity = 135/261 (51.72%), Postives = 179/261 (68.58%), Query Frame = 1
Query:    1 MEELVNTPMEPGQNPDDYFNQKRLLRIRTEKMGERISDRYFKDICVTGFTDNYKDVKMMMYRDPSFDVDQMQTTMRHMFLDEQSRNGTKGRIAGRGSVMTAVTSEQDIICYWCKNRGHSKKDCPKFKSR----TKPAGAAKWCSVHRTTTHRNEECYSQ--GATRP--TKNASVSLA-CTNCGHCTSADSKELTVDNTEPSHSDKPVINFAGSSDDFDGGFVYA--AGMPGR-FTPSAKGATLLVDSGASESFLDDELIPD 747
            MEEL N PM PG+NPDDYFNQK  L ++ +KMGE ISDR FKDICV GF+D Y+DVK+M++RDP+F+V  MQ+TMR+++LDEQSR G KGRIAGRG  M   T+  DIIC+ C   GH +++CPK K+R    TKPAGA KWCS H TT+H +EECY Q  G   P  TK++S +   C++C HC+S  +K         S+++  V++F    D FD GF++A  + + GR F  S+ G  LLVD+GAS +  D+ L+PD
Sbjct:    1 MEELENNPMNPGENPDDYFNQKHPLCVQLDKMGEPISDRRFKDICVQGFSDEYEDVKLMLFRDPTFNVLDMQSTMRNIYLDEQSRKGWKGRIAGRGFAM--ATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEECYQQXQGGKCPEDTKDSSKAFTPCSDCTHCSSTCNKH-------DSNNEVTVVDFTRDEDAFDSGFMFATCSRISGRNFAASSTGVGLLVDTGASATMFDNRLMPD 252          
BLAST of mRNA_D-herbacea_F_contig1113.967.1 vs. uniprot
Match: A0A6H5L1Z9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z9_9PHAE)

HSP 1 Score: 252 bits (644), Expect = 9.140e-74
Identity = 136/264 (51.52%), Postives = 175/264 (66.29%), Query Frame = 1
Query:    1 MEELVNTPMEPGQNPDDYFNQKRLLRIRTEKMGERISDRYFKDICVTGFTDNYKDVKMMMYRDPSFDVDQMQTTMRHMFLDEQSRNGTKGRIAGRGSVMTAVTSEQDIICYWCKNRGHSKKDCPKFK------SRTKPAGAAKWCSVHRTTTHRNEECYSQGATRPTKNASVSLACTNCGHCTSADSKELTVDNT------EPSHSDKPVINFAGSSDDFDGGFVYAA----GMPGRFTPSAKGATLLVDSGASESFLDDELIP 744
            +++L  T MEPG+NPDD+FN+K  LR + EKMGE ISDR FKDICV GF+++YKD+KMM++RDPSFDV QMQ TMR++FLDEQ R  TKG+IAGRG  M   TS    IC+ C   GH +++CP  +       +TKPAGA KWCSVH TTTH +EECY+QGA RP +      ACT+C HC S  S+++    T      E   +++  I+F+   D F GGF+Y A    G    FT +A G + LVDSGASE+  D+ LIP
Sbjct:  136 LDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGP--ICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPERTGKAFSACTHCVHC-STQSRDIQAKPTTTEIPKETEKTEQAEIDFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETMFDNRLIP 396          
BLAST of mRNA_D-herbacea_F_contig1113.967.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE)

HSP 1 Score: 254 bits (648), Expect = 9.400e-74
Identity = 137/264 (51.89%), Postives = 175/264 (66.29%), Query Frame = 1
Query:    1 MEELVNTPMEPGQNPDDYFNQKRLLRIRTEKMGERISDRYFKDICVTGFTDNYKDVKMMMYRDPSFDVDQMQTTMRHMFLDEQSRNGTKGRIAGRGSVMTAVTSEQDIICYWCKNRGHSKKDCPKFK------SRTKPAGAAKWCSVHRTTTHRNEECYSQGATRPTKNASVSLACTNCGHCTSADSKELTVDNT------EPSHSDKPVINFAGSSDDFDGGFVYAA----GMPGRFTPSAKGATLLVDSGASESFLDDELIP 744
            +++L  T MEPG+NPDD+FN+K  LR + EKMGE ISDR FKDICV GF+++YKD+KMM++RDPSFDV QMQ TMR++FLDEQ R  TKG+IAGRG  M   TS    IC+ C   GH +++CP  +       +TKPAGA KWCSVH TTTH +EECY+QGA RP +      ACT+C HC S  S+++    T      E   ++K  I+F+   D F GGF+Y A    G    FT +A G + LVDSGASE+  D+ LIP
Sbjct:  136 LDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGP--ICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPERTGKAFSACTHCVHC-STQSRDIQAKPTTTEIPKETEKTEKAEIDFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETMFDNRLIP 396          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1113.967.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L580_9PHAE9.200e-8055.21CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G6Q1_ECTSI9.310e-8053.05CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KJB9_9PHAE2.260e-7752.47Uncharacterized protein (Fragment) n=2 Tax=Ectocar... [more]
A0A6H5KW66_9PHAE4.550e-7558.92CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K4S9_9PHAE1.410e-7451.71CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K3T5_9PHAE1.740e-7451.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUN9_9PHAE2.460e-7451.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZ53_9PHAE3.650e-7451.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L1Z9_9PHAE9.140e-7451.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHG5_9PHAE9.400e-7451.89Uncharacterized protein n=11 Tax=Ectocarpus sp. CC... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1113contigD-herbacea_F_contig1113:61831..62583 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size753
Cds size753
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927525.874178-CDS-D-herbacea_F_contig1113:61830..625831622927525.874178-CDS-D-herbacea_F_contig1113:61830..62583Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1113 61831..62583 +
1690790215.7986524-CDS-D-herbacea_F_contig1113:61830..625831690790215.7986524-CDS-D-herbacea_F_contig1113:61830..62583Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1113 61831..62583 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1113.967.1prot_D-herbacea_F_contig1113.967.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig1113 61831..62583 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig1113.967.1

>prot_D-herbacea_F_contig1113.967.1 ID=prot_D-herbacea_F_contig1113.967.1|Name=mRNA_D-herbacea_F_contig1113.967.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=251bp
MEELVNTPMEPGQNPDDYFNQKRLLRIRTEKMGERISDRYFKDICVTGFT
DNYKDVKMMMYRDPSFDVDQMQTTMRHMFLDEQSRNGTKGRIAGRGSVMT
AVTSEQDIICYWCKNRGHSKKDCPKFKSRTKPAGAAKWCSVHRTTTHRNE
ECYSQGATRPTKNASVSLACTNCGHCTSADSKELTVDNTEPSHSDKPVIN
FAGSSDDFDGGFVYAAGMPGRFTPSAKGATLLVDSGASESFLDDELIPDL
K
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mRNA from alignment at D-herbacea_F_contig1113:61831..62583+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig1113.967.1 ID=mRNA_D-herbacea_F_contig1113.967.1|Name=mRNA_D-herbacea_F_contig1113.967.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=753bp|location=Sequence derived from alignment at D-herbacea_F_contig1113:61831..62583+ (Desmarestia herbacea DmunF female)
ATGGAGGAGCTCGTGAACACGCCGATGGAGCCCGGACAAAACCCGGACGA TTACTTCAACCAGAAACGTCTTCTTCGCATCAGGACCGAAAAAATGGGAG AACGCATCTCCGATCGATATTTCAAGGATATCTGCGTCACGGGGTTCACC GACAACTACAAAGACGTGAAAATGATGATGTACCGAGACCCCTCCTTCGA CGTCGACCAGATGCAGACCACCATGCGACACATGTTTCTCGACGAGCAGT CACGGAACGGGACGAAAGGACGCATCGCTGGGCGCGGCAGTGTCATGACA GCGGTGACATCGGAGCAGGACATCATCTGCTACTGGTGCAAGAATCGTGG GCACTCAAAGAAAGACTGCCCCAAGTTCAAGTCTCGGACCAAACCAGCTG GAGCAGCGAAGTGGTGCTCTGTCCACCGGACCACCACTCACCGCAACGAA GAATGCTACAGCCAAGGAGCAACGCGCCCGACCAAGAACGCGAGCGTATC CCTAGCGTGCACAAACTGCGGGCACTGCACTTCGGCAGACAGCAAGGAAC TCACCGTCGACAATACCGAGCCATCCCACAGCGATAAGCCGGTTATCAAC TTCGCCGGCAGCAGTGACGACTTTGATGGGGGTTTCGTGTACGCAGCCGG AATGCCGGGACGCTTCACCCCTAGTGCCAAGGGTGCAACTTTACTGGTTG ATAGCGGCGCGTCGGAATCCTTCCTCGACGACGAGCTCATCCCGGACCTC AAG
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Coding sequence (CDS) from alignment at D-herbacea_F_contig1113:61831..62583+

>mRNA_D-herbacea_F_contig1113.967.1 ID=mRNA_D-herbacea_F_contig1113.967.1|Name=mRNA_D-herbacea_F_contig1113.967.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1506bp|location=Sequence derived from alignment at D-herbacea_F_contig1113:61831..62583+ (Desmarestia herbacea DmunF female)
ATGGAGGAGCTCGTGAACACGCCGATGGAGCCCGGACAAAACCCGGACGA
TTACTTCAACCAGAAACGTCTTCTTCGCATCAGGACCGAAAAAATGGGAG
AACGCATCTCCGATCGATATTTCAAGGATATCTGCGTCACGGGGTTCACC
GACAACTACAAAGACGTGAAAATGATGATGTACCGAGACCCCTCCTTCGA
CGTCGACCAGATGCAGACCACCATGCGACACATGTTTCTCGACGAGCAGT
CACGGAACGGGACGAAAGGACGCATCGCTGGGCGCGGCAGTGTCATGACA
GCGGTGACATCGGAGCAGGACATCATCTGCTACTGGTGCAAGAATCGTGG
GCACTCAAAGAAAGACTGCCCCAAGTTCAAGTCTCGGACCAAACCAGCTG
GAGCAGCGAAGTGGTGCTCTGTCCACCGGACCACCACTCACCGCAACGAA
GAATGCTACAGCCAAGGAGCAACGCGCCCGACCAAGAACGCGAGCGTATC
CCTAGCGTGCACAAACTGCGGGCACTGCACTTCGGCAGACAGCAAGGAAC
TCACCGTCGACAATACCGAGCCATCCCACAGCGATAAGCCGGTTATCAAC
TTCGCCGGCAGCAGTGACGACTTTGATGGGGGTTTCGTGTACGCAGCCGG
AATGCCGGGACGCTTCACCCCTAGTGCCAAGGGTGCAACTTTACTGGTTG
ATAGCGGCGCGTCGGAATCCTTCCTCGACGACGAGCTCATCCCGGACCTC
AAGATGGAGGAGCTCGTGAACACGCCGATGGAGCCCGGACAAAACCCGGA
CGATTACTTCAACCAGAAACGTCTTCTTCGCATCAGGACCGAAAAAATGG
GAGAACGCATCTCCGATCGATATTTCAAGGATATCTGCGTCACGGGGTTC
ACCGACAACTACAAAGACGTGAAAATGATGATGTACCGAGACCCCTCCTT
CGACGTCGACCAGATGCAGACCACCATGCGACACATGTTTCTCGACGAGC
AGTCACGGAACGGGACGAAAGGACGCATCGCTGGGCGCGGCAGTGTCATG
ACAGCGGTGACATCGGAGCAGGACATCATCTGCTACTGGTGCAAGAATCG
TGGGCACTCAAAGAAAGACTGCCCCAAGTTCAAGTCTCGGACCAAACCAG
CTGGAGCAGCGAAGTGGTGCTCTGTCCACCGGACCACCACTCACCGCAAC
GAAGAATGCTACAGCCAAGGAGCAACGCGCCCGACCAAGAACGCGAGCGT
ATCCCTAGCGTGCACAAACTGCGGGCACTGCACTTCGGCAGACAGCAAGG
AACTCACCGTCGACAATACCGAGCCATCCCACAGCGATAAGCCGGTTATC
AACTTCGCCGGCAGCAGTGACGACTTTGATGGGGGTTTCGTGTACGCAGC
CGGAATGCCGGGACGCTTCACCCCTAGTGCCAAGGGTGCAACTTTACTGG
TTGATAGCGGCGCGTCGGAATCCTTCCTCGACGACGAGCTCATCCCGGAC
CTCAAG
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