mRNA_D-herbacea_F_contig111.960.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig111.960.1 vs. uniprot
Match: A0A6H5KJF8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJF8_9PHAE) HSP 1 Score: 205 bits (522), Expect = 4.450e-62 Identity = 112/207 (54.11%), Postives = 132/207 (63.77%), Query Frame = 1
Query: 1 MDVLDVIEPEMQAVIEVDHSAGHAKMREDGLHVSNMNVKYGRKQKMLRVSVMVEGCLGPGEAKMYLANGKWGTVFSEGAVEVDLKLKVGDTQIVSFASDAPPPFCDCDAPPRDQVVGTTRNKRKRKSGKGGGADILQDGQGECATSGAGGVEDRIKEGYTSKSKGMKQVLWERGLWVDGMGTGEKLEPQKNMATVLSKLPDFRNERT 621
MDVL+ I+P+MQ V EVDHS+GH K REDGLHVSNMNVKYG KQK+LR SVM E CLGP EAKMY ANG+W T FSEGAV VD KL VG TQ +FA APPPF + DAP +D +K+ KG ++KEGY K+KG++Q LWERG W DGM TG + ++ VL LPDF+NERT
Sbjct: 110 MDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEECLGPEEAKMYFANGRWSTKFSEGAVCVDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKD-----------KKNAKG-----------------------KVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERT 282
BLAST of mRNA_D-herbacea_F_contig111.960.1 vs. uniprot
Match: A0A6H5JVH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVH4_9PHAE) HSP 1 Score: 202 bits (513), Expect = 2.780e-60 Identity = 111/207 (53.62%), Postives = 131/207 (63.29%), Query Frame = 1
Query: 1 MDVLDVIEPEMQAVIEVDHSAGHAKMREDGLHVSNMNVKYGRKQKMLRVSVMVEGCLGPGEAKMYLANGKWGTVFSEGAVEVDLKLKVGDTQIVSFASDAPPPFCDCDAPPRDQVVGTTRNKRKRKSGKGGGADILQDGQGECATSGAGGVEDRIKEGYTSKSKGMKQVLWERGLWVDGMGTGEKLEPQKNMATVLSKLPDFRNERT 621
MDVL+ I+P+MQ V EVDHS+GH K REDGLHVSNMNVKYG KQK+LR SVM E CLGP EAKMY ANG+W T FSEGAV VD KL VG TQ +FA APPPF + AP +D +K+ KG ++KEGY K+KG++Q LWERG W DGM TG + ++ VL LPDF+NERT
Sbjct: 84 MDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEECLGPEEAKMYFANGRWSTKFSEGAVCVDQKLTVGQTQTSTFAVCAPPPFFEWHAPRKD-----------KKNAKG-----------------------KVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERT 256
BLAST of mRNA_D-herbacea_F_contig111.960.1 vs. uniprot
Match: A0A6H5KQB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB9_9PHAE) HSP 1 Score: 201 bits (511), Expect = 4.200e-58 Identity = 119/237 (50.21%), Postives = 142/237 (59.92%), Query Frame = 1
Query: 1 MDVLDVIEPEMQAVIEVDHSAGHAKMREDGLHVSNMNVKYGRKQKMLRVSVMVEGCLGPGEAKMYLANGKWGTVFSEGAVEVDLKLKVGDTQIVSFASDAPPPFCDCDAPPRDQVVGTTRNKRKRKSGKGGGAD-----ILQDGQGECATSGAGGVED-------------------------RIKEGYTSKSKGMKQVLWERGLWVDGMGTGEKLEPQKNMATVLSKLPDFRNERT 621
+DVL+ I+P+MQ V EVDHS+GH K REDGLHVSNMNVKYG KQK+LR SVM EGCLG EAKMY ANG+W T FSEGAV VD KL VG TQ +FA APPPF + DAP +D+ K K K G G A + + G + S GV D ++KEGY K+KG++Q LWERG W DGM TG + ++ VL LPDF+NERT
Sbjct: 219 VDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEGCLGLEEAKMYFANGRWSTKFSEGAVCVDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKDKK----NAKGKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVNPFFEWDTPRKDKKNAKGKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERT 451
BLAST of mRNA_D-herbacea_F_contig111.960.1 vs. uniprot
Match: A0A6H5J4M4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4M4_9PHAE) HSP 1 Score: 193 bits (491), Expect = 2.320e-53 Identity = 104/181 (57.46%), Postives = 124/181 (68.51%), Query Frame = 1
Query: 1 MDVLDVIEPEMQAVIEVDHSAGHAKMREDGLHVSNMNVKYGRKQKMLRVSVMVEGCLGPGEAKMYLANGKWGTVFSEGAVEVDLKLKVGDTQIVSFASDAPPPFCDCDAPPRDQVVGTTRNKRKRKSGKGGGADILQDGQGECATSGAGGVE-DRIKEGYTSKSKGMKQVLWERGLWVDGM 540
+DVLDV EP MQ V+E+DHS+GH + REDGLHV NMNVKYG KQK+LR +VM EGCLGP EAKMYL+NGKW T F+EGA D+KLKVGDTQ +FA+ +PPPF + DAP +D V RK+ + E AT GAG D IKEGY K+KG K+ LWERG W +GM
Sbjct: 969 LDVLDVFEPNMQVVVEIDHSSGHTRQREDGLHVGNMNVKYGGKQKVLRDTVMTEGCLGPEEAKMYLSNGKWSTEFTEGAEVYDMKLKVGDTQTSTFAAGSPPPFYEWDAPRKDVKVA-------RKAKRXXXXXXXXXXGDEGATDGAGTKPMDMIKEGYEGKAKGSKKYLWERGWWKEGM 1142
BLAST of mRNA_D-herbacea_F_contig111.960.1 vs. uniprot
Match: A0A6H5JUX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX8_9PHAE) HSP 1 Score: 187 bits (474), Expect = 1.010e-51 Identity = 97/175 (55.43%), Postives = 115/175 (65.71%), Query Frame = 1
Query: 16 VIEPEMQAVIEVDHSAGHAKMREDGLHVSNMNVKYGRKQKMLRVSVMVEGCLGPGEAKMYLANGKWGTVFSEGAVEVDLKLKVGDTQIVSFASDAPPPFCDCDAPPRDQVVGTTRNKRKRKSGKGGGADILQDGQGECATSGAGGVEDRIKEGYTSKSKGMKQVLWERGLWVDGM 540
V EP+MQ V+E+DHS+GH + REDGLHV NMNVKYG KQK+LR +VM EGCLGP EAKMYL+NGKW T F+EGA D+KLKVGDTQ +FA+ +PPPF + DAP +D V D+ DG G D+IKEGY K+KG KQ LWE G W DGM
Sbjct: 568 VFEPDMQVVVEIDHSSGHTRQREDGLHVGNMNVKYGGKQKVLRDTVMTEGCLGPEEAKMYLSNGKWSTEFTEGAEVYDMKLKVGDTQTSTFAAGSPPPFYEWDAPRKDVKVARKAKXXXXXXXXXXXXDVAADGAGTKP-------RDKIKEGYEGKAKGSKQYLWEWGWWKDGM 735
BLAST of mRNA_D-herbacea_F_contig111.960.1 vs. uniprot
Match: A0A6H5L611_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L611_9PHAE) HSP 1 Score: 187 bits (474), Expect = 3.620e-51 Identity = 111/241 (46.06%), Postives = 131/241 (54.36%), Query Frame = 1
Query: 1 MDVLDVIEPEMQAVIEVDHSAG----------------------------------HAKMREDGLHVSNMNVKYGRKQKMLRVSVMVEGCLGPGEAKMYLANGKWGTVFSEGAVEVDLKLKVGDTQIVSFASDAPPPFCDCDAPPRDQVVGTTRNKRKRKSGKGGGADILQDGQGECATSGAGGVEDRIKEGYTSKSKGMKQVLWERGLWVDGMGTGEKLEPQKNMATVLSKLPDFRNERT 621
MDVL+ I+P+ Q V EVDHS+G H K REDGLHVSNMNVKYG KQK+LR SVM EGCLGP EAKMY ANG+W T F EGAV VD KL VG TQ +FA APPPF + DAP +D +K+ KG ++KEGY K+KG++Q LWERG W DGM TG + ++ VL LPDF+NERT
Sbjct: 659 MDVLEHIDPDKQIVFEVDHSSGPDAKPWTPVXXXXXXXXXXXXXXXXXXXXXXXXXHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEGCLGPEEAKMYFANGRWSTKFREGAVCVDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKD-----------KKNAKG-----------------------KVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERT 865
BLAST of mRNA_D-herbacea_F_contig111.960.1 vs. uniprot
Match: A0A6H5JUI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUI4_9PHAE) HSP 1 Score: 165 bits (418), Expect = 9.220e-44 Identity = 94/177 (53.11%), Postives = 111/177 (62.71%), Query Frame = 1
Query: 79 REDGLHVSNMNVKYGRKQKMLRVSVMVEGCLGPGEAKMYLANGKWGTVFSEGAVEVDLKLKVGDTQIVSFASDAPPPFCDCDAPPRDQVVGTTRNKRKRKSGKGGGADILQDGQGECATSGAGGV-EDRIKEGYTSKSKGMKQVLWERGLWVDGMGTGEKLEPQKNMATVLSKLPDF 606
RED LHV NMNVKYG KQK+LR +VM EGCLGP EAKMYL+NGKW T F+EGA D+KLKVGDTQ +FA+ +PPPF + DAP R V RK+ + E A GAG D+IKEGY K+KG KQ LWERG W +GM + +KN+ VL L DF
Sbjct: 587 REDRLHVGNMNVKYGGKQKVLRDTVMTEGCLGPEEAKMYLSNGKWSTEFTEGAEVYDMKLKVGDTQTSTFAAGSPPPFYEWDAPRRGVKVA-------RKAKRXXXXXXXXXXGDEGAADGAGTKPRDKIKEGYEGKAKGSKQYLWERGWWKEGMNASVGIADEKNIEKVLQALTDF 756
BLAST of mRNA_D-herbacea_F_contig111.960.1 vs. uniprot
Match: A0A6H5L5X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5X3_9PHAE) HSP 1 Score: 164 bits (416), Expect = 1.690e-43 Identity = 95/207 (45.89%), Postives = 119/207 (57.49%), Query Frame = 1
Query: 1 MDVLDVIEPEMQAVIEVDHSAGHAKMREDGLHVSNMNVKYGRKQKMLRVSVMVEGCLGPGEAKMYLANGKWGTVFSEGAVEVDLKLKVGDTQIVSFASDAPPPFCDCDAPPRDQVVGTTRNKRKRKSGKGGGADILQDGQGECATSGAGGVEDRIKEGYTSKSKGMKQVLWERGLWVDGMGTGEKLEPQKNMATVLSKLPDFRNERT 621
+DVL+V EP+MQ V+E+DHS+GH + REDGLHV NMNVKYG KQK+LR +V+ E CLGP E KMYL+NGKW T F EGA D+KLKVGDTQ +FA +PPPF + DAP +D V RK K K++G KQ L ERG W +GM + +KN+ VL L ++RT
Sbjct: 513 LDVLNVFEPDMQVVVEIDHSSGHTRKREDGLHVGNMNVKYGGKQKVLRDTVITEWCLGPEEGKMYLSNGKWSTEFPEGAEVYDMKLKVGDTQTSTFADGSPPPFYEWDAPGKDVKVA-----RKAKXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXKAQGSKQSLGERGWWKEGMNASVGIADEKNIEKVLQALTALESKRT 713
BLAST of mRNA_D-herbacea_F_contig111.960.1 vs. uniprot
Match: A0A6H5KXL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXL0_9PHAE) HSP 1 Score: 157 bits (398), Expect = 2.040e-41 Identity = 84/125 (67.20%), Postives = 94/125 (75.20%), Query Frame = 1
Query: 1 MDVLDVIEPEMQAVIEVDHSAGHAKMREDGLHVSNMNVKYGRKQKMLRVSVMVEGCLGPGEAKMYLANGKWGTVFSEGAVEVDLKLKVGDTQIVSFASDAPPPFCDCDAPPRDQVVGTTRNKRKR 375
MDVL+ I+P+MQ V EVDHS+GH K REDGLHVSNMNVKYG KQK+LR SVM E CLGP EAKMY ANG+W T FSEGAV VD KL VG TQ +FA APPPF + DAP +D T+N R R
Sbjct: 374 MDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEECLGPEEAKMYFANGRWSTKFSEGAVCVDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKD-----TKNARGR 493
BLAST of mRNA_D-herbacea_F_contig111.960.1 vs. uniprot
Match: A0A6H5JMQ7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMQ7_9PHAE) HSP 1 Score: 156 bits (395), Expect = 9.150e-41 Identity = 79/114 (69.30%), Postives = 91/114 (79.82%), Query Frame = 1
Query: 1 MDVLDVIEPEMQAVIEVDHSAGHAKMREDGLHVSNMNVKYGRKQKMLRVSVMVEGCLGPGEAKMYLANGKWGTVFSEGAVEVDLKLKVGDTQIVSFASDAPPPFCDCDAPPRDQ 342
MDVL+ I+P+MQ V EVDHS+GH K REDGLHVSNMNVKYG KQK+LR+SVM E CLGP EAK+Y ANG+W T FSEGAV VD KL VG TQ +FA APPPF + DAP +D+
Sbjct: 588 MDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRLSVMTEECLGPEEAKIYFANGRWSTKFSEGAVCVDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKDK 701 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig111.960.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig111.960.1 >prot_D-herbacea_F_contig111.960.1 ID=prot_D-herbacea_F_contig111.960.1|Name=mRNA_D-herbacea_F_contig111.960.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=208bp MDVLDVIEPEMQAVIEVDHSAGHAKMREDGLHVSNMNVKYGRKQKMLRVSback to top mRNA from alignment at D-herbacea_F_contig111:697472..698095- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig111.960.1 ID=mRNA_D-herbacea_F_contig111.960.1|Name=mRNA_D-herbacea_F_contig111.960.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=624bp|location=Sequence derived from alignment at D-herbacea_F_contig111:697472..698095- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig111:697472..698095- >mRNA_D-herbacea_F_contig111.960.1 ID=mRNA_D-herbacea_F_contig111.960.1|Name=mRNA_D-herbacea_F_contig111.960.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1248bp|location=Sequence derived from alignment at D-herbacea_F_contig111:697472..698095- (Desmarestia herbacea DmunF female)back to top |