mRNA_D-herbacea_F_contig111.950.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig111.950.1 vs. uniprot
Match: A0A6H5JFE5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFE5_9PHAE) HSP 1 Score: 100 bits (250), Expect = 1.150e-19 Identity = 52/153 (33.99%), Postives = 85/153 (55.56%), Query Frame = 2
Query: 572 ERTTERMLRRNHSADDVDAARRAWTTLCDSVTSPALTNKIYACGSPSEAWEMLDNWYKPKGVVMLQQWTAKYESVRMYPGEDPQLYLSRVDDIVDMLEALGVHKTEGEVNMKIIGHLTHDYDVEQRTAFMQENLTRAQIDKIVRERYMRLNGT 1030
E T E L R + A V +R W+ + ++ N +Y+C S +EAW M+++W+ P Q A+ +S+ M EDP+L+ SRV + L A+G+ K++ EV ++ L YDVE+RT+ + +LTRA++ +VR RY L +
Sbjct: 55 EATDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWFLPSHPGDCQLLVAELDSITMSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKAS 207
BLAST of mRNA_D-herbacea_F_contig111.950.1 vs. uniprot
Match: A0A6H5JU47_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU47_9PHAE) HSP 1 Score: 100 bits (248), Expect = 1.280e-19 Identity = 50/149 (33.56%), Postives = 83/149 (55.70%), Query Frame = 2
Query: 584 ERMLRRNHSADDVDAARRAWTTLCDSVTSPALTNKIYACGSPSEAWEMLDNWYKPKGVVMLQQWTAKYESVRMYPGEDPQLYLSRVDDIVDMLEALGVHKTEGEVNMKIIGHLTHDYDVEQRTAFMQENLTRAQIDKIVRERYMRLNGT 1030
E L R + A V +R W+ + ++ N +Y+C S +EAW M+++WY P Q A+ +++ M EDP+L+ SRV + L A+G+ K++ EV ++ L YDVE+RT+ + +LTRA++ +VR RY L +
Sbjct: 74 EGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKAS 222
BLAST of mRNA_D-herbacea_F_contig111.950.1 vs. uniprot
Match: A0A6H5JBS7_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS7_9PHAE) HSP 1 Score: 100 bits (248), Expect = 1.900e-19 Identity = 50/149 (33.56%), Postives = 83/149 (55.70%), Query Frame = 2
Query: 584 ERMLRRNHSADDVDAARRAWTTLCDSVTSPALTNKIYACGSPSEAWEMLDNWYKPKGVVMLQQWTAKYESVRMYPGEDPQLYLSRVDDIVDMLEALGVHKTEGEVNMKIIGHLTHDYDVEQRTAFMQENLTRAQIDKIVRERYMRLNGT 1030
E L R + A V +R W+ + ++ N +Y+C S +EAW M+++WY P Q A+ +++ M EDP+L+ SRV + L A+G+ K++ EV ++ L YDVE+RT+ + +LTRA++ +VR RY L +
Sbjct: 74 EGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKAS 222
BLAST of mRNA_D-herbacea_F_contig111.950.1 vs. uniprot
Match: A0A6H5L646_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L646_9PHAE) HSP 1 Score: 100 bits (248), Expect = 2.160e-19 Identity = 51/149 (34.23%), Postives = 82/149 (55.03%), Query Frame = 2
Query: 584 ERMLRRNHSADDVDAARRAWTTLCDSVTSPALTNKIYACGSPSEAWEMLDNWYKPKGVVMLQQWTAKYESVRMYPGEDPQLYLSRVDDIVDMLEALGVHKTEGEVNMKIIGHLTHDYDVEQRTAFMQENLTRAQIDKIVRERYMRLNGT 1030
E L R + A V +R W+ + ++ N +Y+C S +EAW M+++WY P Q A+ E++ M EDP+L+ SRV + L A G+ K+E EV ++ L +DVE+RT+ + +LTRA++ +VR RY L +
Sbjct: 146 EGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELENITMSDDEDPKLFFSRVAQLETKLRAAGIAKSEQEVVQILVRQLPARFDVEKRTSLSKRDLTRAELQDVVRGRYATLKAS 294
BLAST of mRNA_D-herbacea_F_contig111.950.1 vs. uniprot
Match: A0A6H5JN41_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN41_9PHAE) HSP 1 Score: 100 bits (248), Expect = 2.220e-19 Identity = 50/149 (33.56%), Postives = 83/149 (55.70%), Query Frame = 2
Query: 584 ERMLRRNHSADDVDAARRAWTTLCDSVTSPALTNKIYACGSPSEAWEMLDNWYKPKGVVMLQQWTAKYESVRMYPGEDPQLYLSRVDDIVDMLEALGVHKTEGEVNMKIIGHLTHDYDVEQRTAFMQENLTRAQIDKIVRERYMRLNGT 1030
E L R + A V +R W+ + ++ N +Y+C S +EAW M+++WY P Q A+ +++ M EDP+L+ SRV + L A+G+ K++ EV ++ L YDVE+RT+ + +LTRA++ +VR RY L +
Sbjct: 146 EGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKAS 294
BLAST of mRNA_D-herbacea_F_contig111.950.1 vs. uniprot
Match: A0A6H5K2K1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2K1_9PHAE) HSP 1 Score: 100 bits (248), Expect = 2.510e-19 Identity = 50/149 (33.56%), Postives = 83/149 (55.70%), Query Frame = 2
Query: 584 ERMLRRNHSADDVDAARRAWTTLCDSVTSPALTNKIYACGSPSEAWEMLDNWYKPKGVVMLQQWTAKYESVRMYPGEDPQLYLSRVDDIVDMLEALGVHKTEGEVNMKIIGHLTHDYDVEQRTAFMQENLTRAQIDKIVRERYMRLNGT 1030
E L R + A V +R W+ + ++ N +Y+C S +EAW M+++WY P Q A+ +++ M EDP+L+ SRV + L A+G+ K++ EV ++ L YDVE+RT+ + +LTRA++ +VR RY L +
Sbjct: 146 EGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKAS 294
BLAST of mRNA_D-herbacea_F_contig111.950.1 vs. uniprot
Match: A0A6H5LA89_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA89_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 6.720e-19 Identity = 50/149 (33.56%), Postives = 81/149 (54.36%), Query Frame = 2
Query: 584 ERMLRRNHSADDVDAARRAWTTLCDSVTSPALTNKIYACGSPSEAWEMLDNWYKPKGVVMLQQWTAKYESVRMYPGEDPQLYLSRVDDIVDMLEALGVHKTEGEVNMKIIGHLTHDYDVEQRTAFMQENLTRAQIDKIVRERYMRLNGT 1030
E L R + A V +R W+ + ++ N +Y+C S + AW M+++WY P Q A+ +++ M EDP+L+ SRV + L A+G+ K+E EV ++ L YDVE+RT+ +LTRA++ +VR RY L +
Sbjct: 146 EGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAGAWRMMEDWYLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSEQEVVRILVRQLPARYDVEKRTSLSNRDLTRAELQDVVRGRYATLKAS 294
BLAST of mRNA_D-herbacea_F_contig111.950.1 vs. uniprot
Match: A0A6H5KWA2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWA2_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 2.220e-18 Identity = 51/149 (34.23%), Postives = 83/149 (55.70%), Query Frame = 2
Query: 584 ERMLRRNHSADDVDAARRAWTTLCDSVTSPALTNKIYACGSPSEAWEMLDNWYKPKGVVMLQQWTAKYESVRMYPGEDPQLYLSRVDDIVDMLEALGVHKTEGEVNMKIIGHLTHDYDVEQRTAFMQENLTRAQIDKIVRERYMRLNGT 1030
E L R + A V +R W+ + ++ L NK+Y+C S +EAW M+ +W+ P Q A+ ++V M E+P+L+ SRV + L A+ + K+E EV ++ L YDVE+RT+ + +LTRA++ +VR RY L +
Sbjct: 146 EGYLTRQYGAQLVVEHKRTWSFILEAAVGGPLENKMYSCHSVAEAWRMMADWFLPSHPADCQLLVAELDTVTMNNDENPKLFCSRVAQLETKLRAVVIAKSEQEVVQILVRQLPARYDVEKRTSLPKRDLTRAELQDVVRGRYATLKAS 294
BLAST of mRNA_D-herbacea_F_contig111.950.1 vs. uniprot
Match: A0A6H5JVD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVD9_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 2.070e-17 Identity = 47/146 (32.19%), Postives = 80/146 (54.79%), Query Frame = 2
Query: 593 LRRNHSADDVDAARRAWTTLCDSVTSPALTNKIYACGSPSEAWEMLDNWYKPKGVVMLQQWTAKYESVRMYPGEDPQLYLSRVDDIVDMLEALGVHKTEGEVNMKIIGHLTHDYDVEQRTAFMQENLTRAQIDKIVRERYMRLNGT 1030
L R + A V +R W+ + ++ N +Y+C S +EAW M+++WY P Q A+ + + M E+P+L+ SRV + L A+G+ K++ EV ++ YDVE+RT+ + +LTRA++ +VR RY L +
Sbjct: 149 LIRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELDDITMSDDENPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQYPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKAS 294
BLAST of mRNA_D-herbacea_F_contig111.950.1 vs. uniprot
Match: A0A6H5JXN1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN1_9PHAE) HSP 1 Score: 58.5 bits (140), Expect = 9.990e-6 Identity = 30/77 (38.96%), Postives = 47/77 (61.04%), Query Frame = 2
Query: 800 MYPGEDPQLYLSRVDDIVDMLEALGVHKTEGEVNMKIIGHLTHDYDVEQRTAFMQENLTRAQIDKIVRERYMRLNGT 1030
M EDP+L+ SRV + L A+G+ K++ EV ++ L YDVE+RT+ + +LTRA++ +VR RY L +
Sbjct: 1 MSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKAS 77 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig111.950.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig111.950.1 >prot_D-herbacea_F_contig111.950.1 ID=prot_D-herbacea_F_contig111.950.1|Name=mRNA_D-herbacea_F_contig111.950.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=289bp MASASRASDSATGGLDTIEDLRRELLEMRRERKAEQQQSREELKDLQEKLback to top mRNA from alignment at D-herbacea_F_contig111:481909..482938+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig111.950.1 ID=mRNA_D-herbacea_F_contig111.950.1|Name=mRNA_D-herbacea_F_contig111.950.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=1030bp|location=Sequence derived from alignment at D-herbacea_F_contig111:481909..482938+ (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig111:481909..482938+ >mRNA_D-herbacea_F_contig111.950.1 ID=mRNA_D-herbacea_F_contig111.950.1|Name=mRNA_D-herbacea_F_contig111.950.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1734bp|location=Sequence derived from alignment at D-herbacea_F_contig111:481909..482938+ (Desmarestia herbacea DmunF female)back to top |