mRNA_D-herbacea_F_contig111.945.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig111.945.1 vs. uniprot
Match: A0A6H5JV79_9PHAE (Cupin type-1 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JV79_9PHAE) HSP 1 Score: 302 bits (773), Expect = 1.090e-101 Identity = 147/194 (75.77%), Postives = 169/194 (87.11%), Query Frame = 1
Query: 1 QARISSFKPEDFAFSLGGPEPDNLLEGFQIRGVNVNQLPALQGLGISMALVNLDPCAINLPHIHPRATEMLYTIEGEQLRVAFVEENGGDGAVVNDLYQGDVAFFPQGLIHYQQNLDCKPATFLAALNSEDAGAVTITTRFFDLPSEAIQASLNFEDPQIKALIDSLPQAPAAARRECLARCGLNDDEDGSDFS 582
Q +I+ + PEDF FSLGGPEPD L++GFQ+R VNQLPAL G GISM LVNLDPCAINLPHIHPRATEM+Y I+GEQLRVAFVEENGG+GAVVNDL QGDVAFFPQGLIHYQQNLDC+PATFLAALN+ED GA+TITTRFF+LP EAIQAS+NFE+P ++ LI+SLP APAAAR++CL RC + E G+ FS
Sbjct: 30 QQQITLYNPEDFVFSLGGPEPDALVDGFQLRTAVVNQLPALDGQGISMGLVNLDPCAINLPHIHPRATEMVYVIKGEQLRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNEDPGAITITTRFFELPLEAIQASVNFEEPVLQNLIESLPDAPAAARQQCLQRCRMA--EPGNHFS 221
BLAST of mRNA_D-herbacea_F_contig111.945.1 vs. uniprot
Match: D8LDW6_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDW6_ECTSI) HSP 1 Score: 298 bits (763), Expect = 2.840e-100 Identity = 143/194 (73.71%), Postives = 162/194 (83.51%), Query Frame = 1
Query: 1 QARISSFKPEDFAFSLGGPEPDNLLEGFQIRGVNVNQLPALQGLGISMALVNLDPCAINLPHIHPRATEMLYTIEGEQLRVAFVEENGGDGAVVNDLYQGDVAFFPQGLIHYQQNLDCKPATFLAALNSEDAGAVTITTRFFDLPSEAIQASLNFEDPQIKALIDSLPQAPAAARRECLARCGLNDDEDGSDFS 582
Q +I+ F PEDF F+LGGPEPD ++GFQIR + Q+PAL G GI+MALVNLD C INLPHIHPRATEM Y I GE LRVAFVEENGG+GAVVNDL QGDV FFPQGLIHY+QNL C+P TFLAALN++D GAVTITTRFF+LPSEAIQASLNFEDP ++ LI+SLP APAAARR+CL RCGL D DG +S
Sbjct: 31 QQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQRLIESLPDAPAAARRQCLERCGLADGGDGFSYS 224
BLAST of mRNA_D-herbacea_F_contig111.945.1 vs. uniprot
Match: A0A507FDZ0_9FUNG (Cupin type-1 domain-containing protein n=2 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FDZ0_9FUNG) HSP 1 Score: 168 bits (426), Expect = 7.110e-49 Identity = 88/184 (47.83%), Postives = 115/184 (62.50%), Query Frame = 1
Query: 7 RISSFKPEDFAFSL-GGPEPDNLLEGFQIRGVNVNQLPALQGLGISMALVNLDPCAINLPHIHPRATEMLYTIEGEQLRVAFVEENGGDGAVVNDLYQGDVAFFPQGLIHYQQNLDCKPATFLAALNSEDAGAVTITTRFFDLPSEAIQASLNFE-DPQIKALIDSLPQAPAAARRECLARCGL 552
R+ F EDF L P+ + +G + +N+ +PAL G++M L+NL+PC NLPH+HPRA+E +Y I+G ++V F+EENG +VNDL QG F PQG IHYQ NL C+ A +AA N+ED G +TI +FF LP AI ASL DP+I+AL SLP PA ECL RCG
Sbjct: 41 RMKQFNHEDFITDLLHNPKSTEVGKGGSLAKMNLGSMPALARQGLAMVLINLNPCGANLPHVHPRASEAIYVIQGN-VQVGFIEENGAK-VIVNDLVQGQATFIPQGSIHYQVNLGCEQAVMIAANNNEDPGTLTIPAQFFKLPDGAIAASLGGTLDPEIRALNGSLPMNPAPGVEECLRRCGF 222
BLAST of mRNA_D-herbacea_F_contig111.945.1 vs. uniprot
Match: A0A0G4EJ88_VITBC (Cupin type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EJ88_VITBC) HSP 1 Score: 159 bits (402), Expect = 1.910e-44 Identity = 81/175 (46.29%), Postives = 110/175 (62.86%), Query Frame = 1
Query: 34 FAFSLGGPEPDNLLEGFQIRGVNVNQLPALQGLGISMALVNLDPCAINLPHIHPRATEMLYTIEGEQLRVAFVEENGGDGAVVNDLYQGDVAFFPQGLIHYQQNLDCKPATFLAALNSEDAGAVTITTRFFDLPSEAIQASLNFEDPQIKALIDSLPQAPAAA--RRECLARCGL 552
F F+ E D +G + G +V+Q PAL G G+S LV+L PC+IN PH+HPRATE++Y I+G ++ V F EENGG V ND+ +GD AFFP LIH+Q N C+PA F+A LNS+D G TI FF LP + + +L ++ ++ L + LP PA R EC +CGL
Sbjct: 147 FDFNTARAEADTNGQGGAVTGASVSQWPALSGHGLSHTLVDLAPCSINTPHVHPRATEIIYIIKG-RVSVGFAEENGGR-IVTNDVKEGDTAFFPHTLIHWQFNPTCEPAQFIATLNSDDGGVQTIAQAFFGLPDDVLATALGVDEYEVAVLREELPAGPALGLQREECRRKCGL 319
BLAST of mRNA_D-herbacea_F_contig111.945.1 vs. uniprot
Match: A0A0L0FR85_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FR85_9EUKA) HSP 1 Score: 154 bits (388), Expect = 1.080e-42 Identity = 80/187 (42.78%), Postives = 115/187 (61.50%), Query Frame = 1
Query: 10 ISSFKPEDFAFSLGGPEP---DNLLEGFQIRGVNVNQLPALQGLGISMALVNLDPCAINLPHIHPRATEMLYTIEGEQLRVAFVEENGGDGAVVNDLYQGDVAFFPQGLIHYQQNLDCKPATFLAALNSEDAGAVTITTRFFDLPSEAIQASLNFEDPQIKALIDSLPQAPAAARRECLARCGLNDD 561
+ +F EDF F D+L G I+ VN+ + P +Q G+S + ++ PC INLPH+HPRATE LY IEG Q+ + FV D ++NDL + V FFP+G +HYQQN++C+ A F++ L++ED G + +++ LP EA+ A+ N + I L LP+ PA AR ECLARCGL+ D
Sbjct: 102 LDNFDNEDFVFDFTDSNKVTVDSLGLGGNIQPVNLEEFPIMQLAGMSYSRFSIGPCGINLPHVHPRATESLYMIEG-QVTLGFVSTE--DRLIMNDLEKDQVTFFPKGHLHYQQNMNCENAEFISILDNEDPGVLVVSSALLSLPDEALTATFNEDQALIAQLRLGLPEGPARARSECLARCGLDMD 285
BLAST of mRNA_D-herbacea_F_contig111.945.1 vs. uniprot
Match: A0A0G4EG82_VITBC (Cupin type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EG82_VITBC) HSP 1 Score: 148 bits (374), Expect = 4.440e-41 Identity = 80/180 (44.44%), Postives = 104/180 (57.78%), Query Frame = 1
Query: 19 FKPEDFAFSLGGPEPDNLLEGFQIRGVNVNQLPALQGLGISMALVNLDPCAINLPHIHPRATEMLYTIEGEQLRVAFVEENGGDGAVVNDLYQGDVAFFPQGLIHYQQNLDCKPATFLAALNSEDAGAVTITTRFFDLPSEAIQASLNFEDPQIKALIDSLPQAPAAA--RRECLARCGL 552
F DF F + EG IRG Q PAL G G S + ++ PC+IN PH+HPRATEMLY +G +L V F EENGG V ND+ +G+ AFFP LIH+Q N C+PA F+ LNS+D G TI F LP++ + +LN ++ + L D LP PA R +C +CGL
Sbjct: 69 FGNSDFTFDFNEAQVLTNGEGGGIRGATPVQWPALSGHGFSQTVTDIAPCSINTPHLHPRATEMLYITKG-RLIVGFAEENGGR-IVTNDIKEGNSAFFPHTLIHWQFNPTCEPAQFVGTLNSDDGGVHTIAQALFGLPNDVLATALNVDEYDVTLLHDELPNVPALGLKRDQCRRKCGL 246
BLAST of mRNA_D-herbacea_F_contig111.945.1 vs. uniprot
Match: A0A0L0GAB9_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GAB9_9EUKA) HSP 1 Score: 144 bits (364), Expect = 4.760e-40 Identity = 76/185 (41.08%), Postives = 103/185 (55.68%), Query Frame = 1
Query: 10 ISSFKPEDFAFSLG----GPEPDNLLEGFQIRGVNVNQLPALQGLGISMALVNLDPCAINLPHIHPRATEMLYTIEGEQLRVAFVEENGGDGAVVNDLYQGDVAFFPQGLIHYQQNLDCKPATFLAALNSEDAGAVTITTRFFDLPSEAIQASLNFEDPQIKALIDSLPQAPAAARRECLARCGL 552
+ +F EDF F G D+ G + N+N P +Q ++ + PC INLPH+HPR TE Y IEGE L V FV E+G V+ND+ FFPQGL+HYQQN+ C+PA F++ L+S D G + I LP EAI A+ + ++ + + LP+ PA R ECL RCGL
Sbjct: 19 MDNFDAEDFVFDFSDFETGVRVDSDGNGGSSQPANINTFPVVQVANMAQTRFRIAPCGINLPHVHPRGTESAYMIEGE-LTVGFVMESGR--TVINDIKADQSTFFPQGLLHYQQNMGCEPAGFISILDSSDPGLLVIAAAVAGLPEEAIAAAFDEDEAFVAQMRMGLPKVPARGRAECLVRCGL 200
BLAST of mRNA_D-herbacea_F_contig111.945.1 vs. uniprot
Match: A0A836CNU2_9STRA (RmlC-like cupin domain-containing protein n=7 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNU2_9STRA) HSP 1 Score: 144 bits (363), Expect = 1.780e-39 Identity = 79/182 (43.41%), Postives = 102/182 (56.04%), Query Frame = 1
Query: 31 DFAFSLGGPEPDNLLEGFQIRGVNVNQLPALQGLGISMALVNLDPCAINLPHIHPRATEMLYTIEG--EQLRVAFVEENGGDGAVVNDLYQGDVAFFPQGLIHYQQNLDCKPATFLAALNSEDAGAVTITTRFF------DLPSEAIQASLNFEDPQIKALIDSLPQAPAAARRECLARCGL 552
DF F L G + G + ++ QLP+L G ++M + L+PC INLPH+HPRATE+LY ++ E + AFVEENGG + N + G+ AFFPQGL H Q N+ C PAT +AAL S+D G TITT D E + A+L Q+ LI P PA EC RCGL
Sbjct: 60 DFKFDLDGSKATTGNGGGSAQTLSAAQLPSLTGEKVAMVKLVLEPCGINLPHVHPRATEILYVVDAAAEGVLTAFVEENGGR-TIENTIVTGEAAFFPQGLTHVQVNMGCTPATMIAALGSDDFGVQTITTTALKGLAGADGLGEGLAAALGISQDQLAVLIGGFPDGPAIGAAECRQRCGL 240
BLAST of mRNA_D-herbacea_F_contig111.945.1 vs. uniprot
Match: A0A835YZF9_9STRA (RmlC-like cupin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZF9_9STRA) HSP 1 Score: 141 bits (356), Expect = 4.680e-39 Identity = 78/182 (42.86%), Postives = 102/182 (56.04%), Query Frame = 1
Query: 31 DFAFSLGGPEPDNLLEGFQIRGVNVNQLPALQGLGISMALVNLDPCAINLPHIHPRATEMLYTIEG--EQLRVAFVEENGGDGAVVNDLYQGDVAFFPQGLIHYQQNLDCKPATFLAALNSEDAGAVTITTRFFDLPS------EAIQASLNFEDPQIKALIDSLPQAPAAARRECLARCGL 552
DF F L G G + ++ QLP+L G ++M + L+PC INLPH+HPRATE+LY ++ E + AFVEENGG + N + G+ AFFPQGL H Q N+ C PAT +AAL S+D G TITT + + E + A+L Q+ LI P PA EC RCGL
Sbjct: 9 DFKFDLAGSTATAGNGGGSAQTLSAAQLPSLTGEKVAMVKLVLEPCGINLPHVHPRATEILYVVDAAAEGVLTAFVEENGGR-TIENTVVAGEAAFFPQGLTHMQVNMGCTPATMIAALGSDDFGVQTITTTALEGLAGAEGLGEGLAAALGISQDQLAVLIGGFPDGPAIGAAECRQRCGL 189
BLAST of mRNA_D-herbacea_F_contig111.945.1 vs. uniprot
Match: A0A0L0FUE8_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FUE8_9EUKA) HSP 1 Score: 143 bits (360), Expect = 1.900e-38 Identity = 74/183 (40.44%), Postives = 103/183 (56.28%), Query Frame = 1
Query: 4 ARISSFKPEDFAFSLGGPEPDNLLEGFQIRGVNVNQLPALQGLGISMALVNLDPCAINLPHIHPRATEMLYTIEGEQLRVAFVEENGGDGAVVNDLYQGDVAFFPQGLIHYQQNLDCKPATFLAALNSEDAGAVTITTRFFDLPSEAIQASLNFEDPQIKALIDSLPQAPAAARRECLARCGL 552
A +++F EDF ++ G + N N +P +Q ++ + PC INLPH+HPR TE +Y IEG L V FV E G ++ND+ FFPQGL+HYQQN+ C+PA F++ LNS D G + I +LPSEA++A+ + + + L LP PA R ECL RCGL
Sbjct: 114 AFLNNFDAEDFVIDFATQPLESTGLGGTSQPANRNNVPVIQASNMAQTRFRIAPCGINLPHVHPRGTESVYIIEGA-LTVGFVTEGGR--LILNDVKTDQSTFFPQGLLHYQQNMACEPAGFISILNSSDPGLLVIPAALAELPSEALEATFDEDAAFVNQLRIGLPAGPARGRAECLRRCGL 293 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig111.945.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig111.945.1 >prot_D-herbacea_F_contig111.945.1 ID=prot_D-herbacea_F_contig111.945.1|Name=mRNA_D-herbacea_F_contig111.945.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=202bp QARISSFKPEDFAFSLGGPEPDNLLEGFQIRGVNVNQLPALQGLGISMALback to top mRNA from alignment at D-herbacea_F_contig111:415284..416667+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig111.945.1 ID=mRNA_D-herbacea_F_contig111.945.1|Name=mRNA_D-herbacea_F_contig111.945.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=1384bp|location=Sequence derived from alignment at D-herbacea_F_contig111:415284..416667+ (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig111:415284..416667+ >mRNA_D-herbacea_F_contig111.945.1 ID=mRNA_D-herbacea_F_contig111.945.1|Name=mRNA_D-herbacea_F_contig111.945.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1212bp|location=Sequence derived from alignment at D-herbacea_F_contig111:415284..416667+ (Desmarestia herbacea DmunF female)back to top |