mRNA_D-herbacea_F_contig111.944.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig111.944.1
Unique NamemRNA_D-herbacea_F_contig111.944.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
BLAST of mRNA_D-herbacea_F_contig111.944.1 vs. uniprot
Match: D7FI71_ECTSI (Ribosomal_L14e domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI71_ECTSI)

HSP 1 Score: 226 bits (576), Expect = 3.310e-70
Identity = 112/133 (84.21%), Postives = 124/133 (93.23%), Query Frame = 1
Query:    1 GFTRFVEIGRVVLVNYGPHEGKLAVIIDVVDNNKALVDGPDTGVPRQMIPFKRLSLTDFKLPIQRNSRAGTISKATKEADLIAKWDASSWAKKRARKIKRASMNDFDRFQVMVARKQKSAIIAKKVSELQAAA 399
            GFTRFVEIGRVVLVNYGP EGKLAVI+DV DNNKAL++GPDTGVPRQ+IPFKRL+LTDFKLPIQRN+R GTI  A KEADL AKW+ASSWAKK+A+K+KRA M DFDRF+VMVARKQKSAIIAKKV+ELQAAA
Sbjct:    2 GFTRFVEIGRVVLVNYGPDEGKLAVILDVADNNKALIEGPDTGVPRQLIPFKRLALTDFKLPIQRNARIGTIKAAAKEADLYAKWEASSWAKKKAKKVKRAQMTDFDRFKVMVARKQKSAIIAKKVAELQAAA 134          
BLAST of mRNA_D-herbacea_F_contig111.944.1 vs. uniprot
Match: A0A835YLN7_9STRA (Ribosomal protein L14-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLN7_9STRA)

HSP 1 Score: 177 bits (448), Expect = 5.320e-51
Identity = 87/135 (64.44%), Postives = 111/135 (82.22%), Query Frame = 1
Query:    1 GFTRFVEIGRVVLVNYGPHEGKLAVIIDVVDNNKALVDGPD--TGVPRQMIPFKRLSLTDFKLPIQRNSRAGTISKATKEADLIAKWDASSWAKKRARKIKRASMNDFDRFQVMVARKQKSAIIAKKVSELQAAA 399
            GFTRFVEIGRV L+NYGP EGKL  IIDVVD+NKAL+DGP+  TGV RQMIPFKRL+LTDFK+ I RN+R GT+ KA  EAD++AKW A++WA+KRA K KRAS+ D DRF++M+ARKQK+  +   +++L+ +A
Sbjct:    2 GFTRFVEIGRVALINYGPDEGKLCTIIDVVDHNKALIDGPEELTGVKRQMIPFKRLALTDFKVKILRNARQGTLKKAFAEADVLAKWGATAWARKRAAKAKRASLGDLDRFKLMIARKQKARAVNTALAKLKKSA 136          
BLAST of mRNA_D-herbacea_F_contig111.944.1 vs. uniprot
Match: F0YD47_AURAN (Ribosomal_L14e domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YD47_AURAN)

HSP 1 Score: 174 bits (441), Expect = 5.000e-50
Identity = 88/130 (67.69%), Postives = 107/130 (82.31%), Query Frame = 1
Query:    4 FTRFVEIGRVVLVNYGPHEGKLAVIIDVVDNNKALVDGP--DTGVPRQMIPFKRLSLTDFKLPIQRNSRAGTISKATKEADLIAKWDASSWAKKRARKIKRASMNDFDRFQVMVARKQKSAIIAKKVSEL 387
            F+RFVE+GRVVL+NYGP EGKLA IID+VD NK LVDGP   TGV RQ+IPFKR++LTD  + I +N+R  T++KA  EAD++AKWDASSWAKK A K KRAS+ DF RFQ+MVARKQ+SAI+A KV E+
Sbjct:    1 FSRFVEVGRVVLINYGPDEGKLATIIDIVDGNKCLVDGPATKTGVARQVIPFKRVALTDIVVKIPKNARQKTLNKAWDEADVLAKWDASSWAKKLAAKKKRASLTDFQRFQLMVARKQRSAIVAAKVKEM 130          
BLAST of mRNA_D-herbacea_F_contig111.944.1 vs. uniprot
Match: A0A6U0GYB4_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A6U0GYB4_9STRA)

HSP 1 Score: 171 bits (432), Expect = 1.240e-48
Identity = 87/132 (65.91%), Postives = 108/132 (81.82%), Query Frame = 1
Query:    4 FTRFVEIGRVVLVNYGPHEGKLAVIIDVVDNNKALVDGPD--TGVPRQMIPFKRLSLTDFKLPIQRNSRAGTISKATKEADLIAKWDASSWAKKRARKIKRASMNDFDRFQVMVARKQKSAIIAKKVSELQA 393
            FTR+VEIGRVVL+NYGP  GKLA IID+VD NK LV+GP   TGV RQ+IP+KR++LTD K+ I RN+R+ T+  A  EAD + +W++SSWAKK A K KRAS++DFDRF+VMVARKQKSAII KK+ EL+A
Sbjct:    4 FTRYVEIGRVVLINYGPDAGKLATIIDIVDQNKCLVEGPADITGVTRQVIPYKRIALTDLKVKICRNARSKTLKAAWAEADTLKQWESSSWAKKLAAKKKRASLSDFDRFKVMVARKQKSAIIEKKIKELKA 135          
BLAST of mRNA_D-herbacea_F_contig111.944.1 vs. uniprot
Match: A0A7S0F6W3_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7S0F6W3_9STRA)

HSP 1 Score: 170 bits (431), Expect = 1.690e-48
Identity = 85/132 (64.39%), Postives = 108/132 (81.82%), Query Frame = 1
Query:    4 FTRFVEIGRVVLVNYGPHEGKLAVIIDVVDNNKALVDGPD--TGVPRQMIPFKRLSLTDFKLPIQRNSRAGTISKATKEADLIAKWDASSWAKKRARKIKRASMNDFDRFQVMVARKQKSAIIAKKVSELQA 393
            F R+VE+GRVVL+NYGP EGKLA IID+VD NK L+DGP   TG PRQ+I F R++LTD  + IQRN+R  ++ KA +E + ++KWDASSWAKK A + KRAS++DFDRF+VMVARKQK+ IIAKKV+EL+A
Sbjct:    3 FKRYVEVGRVVLINYGPDEGKLATIIDIVDQNKCLIDGPMEITGAPRQVISFTRIALTDLTVKIQRNARQKSLKKAWEEGETMSKWDASSWAKKLAARKKRASLSDFDRFKVMVARKQKNEIIAKKVAELEA 134          
BLAST of mRNA_D-herbacea_F_contig111.944.1 vs. uniprot
Match: A0A6U6K629_9STRA (Hypothetical protein n=2 Tax=Odontellaceae TaxID=2749909 RepID=A0A6U6K629_9STRA)

HSP 1 Score: 170 bits (430), Expect = 2.380e-48
Identity = 81/132 (61.36%), Postives = 109/132 (82.58%), Query Frame = 1
Query:    4 FTRFVEIGRVVLVNYGPHEGKLAVIIDVVDNNKALVDGPD--TGVPRQMIPFKRLSLTDFKLPIQRNSRAGTISKATKEADLIAKWDASSWAKKRARKIKRASMNDFDRFQVMVARKQKSAIIAKKVSELQA 393
            F+R+VE+GRVVL+NYGP  GKLA +ID+VD NK L+DGP+  TGV RQ+IP+KR++LTD K+ +QR++RA T+  A KE D + KW++SSWAKK A K KRA+++DFDRF+VMVA+KQK  I+AKKV E++A
Sbjct:    3 FSRYVEVGRVVLINYGPESGKLATVIDIVDQNKCLIDGPEEITGVSRQVIPYKRIALTDLKVNVQRSARAKTLKAAWKEGDTLNKWESSSWAKKLASKKKRANLSDFDRFKVMVAKKQKRYIVAKKVKEMKA 134          
BLAST of mRNA_D-herbacea_F_contig111.944.1 vs. uniprot
Match: A0A7S2S552_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S552_9STRA)

HSP 1 Score: 169 bits (429), Expect = 3.360e-48
Identity = 84/132 (63.64%), Postives = 107/132 (81.06%), Query Frame = 1
Query:    4 FTRFVEIGRVVLVNYGPHEGKLAVIIDVVDNNKALVDGPD--TGVPRQMIPFKRLSLTDFKLPIQRNSRAGTISKATKEADLIAKWDASSWAKKRARKIKRASMNDFDRFQVMVARKQKSAIIAKKVSELQA 393
            FTR+ E+GRVVL+N+GP  GKLA IID+VD NK LV+GP+  TGV R++IPF+RL LTDF + I RN+R+ T+  A KEAD+ AKW+A+SWAKK   K KRA ++DF RF+VMVARKQKSAII+KK+ EL+A
Sbjct:    3 FTRYAEVGRVVLINFGPDAGKLATIIDIVDQNKCLVEGPEDITGVSRKVIPFRRLQLTDFTVKISRNARSKTLKAAWKEADISAKWEATSWAKKLDNKAKRADLSDFGRFKVMVARKQKSAIISKKIKELKA 134          
BLAST of mRNA_D-herbacea_F_contig111.944.1 vs. uniprot
Match: A0A7S2EK65_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EK65_TRICV)

HSP 1 Score: 171 bits (434), Expect = 3.750e-48
Identity = 85/132 (64.39%), Postives = 108/132 (81.82%), Query Frame = 1
Query:    4 FTRFVEIGRVVLVNYGPHEGKLAVIIDVVDNNKALVDGPD--TGVPRQMIPFKRLSLTDFKLPIQRNSRAGTISKATKEADLIAKWDASSWAKKRARKIKRASMNDFDRFQVMVARKQKSAIIAKKVSELQA 393
            FTR+VE+GRVVL+NYGP EGKLA IID+VD NK L+DGP   TGV RQ+IP+KR++LTD  + I RN+RA T+ KA  E D+ AKWD SSWAKK + K KRAS++DF RF+VMVA+K++SAI+AKK+ EL+A
Sbjct:   61 FTRYVEVGRVVLINYGPEEGKLATIIDIVDQNKCLIDGPADLTGVVRQVIPYKRIALTDITVKIARNARAKTLKKAWTEGDVQAKWDGSSWAKKLSSKKKRASLSDFGRFKVMVAKKKRSAIVAKKIKELKA 192          
BLAST of mRNA_D-herbacea_F_contig111.944.1 vs. uniprot
Match: A0A7S2SNQ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNQ8_9STRA)

HSP 1 Score: 168 bits (425), Expect = 2.330e-47
Identity = 83/130 (63.85%), Postives = 104/130 (80.00%), Query Frame = 1
Query:    1 GFTRFVEIGRVVLVNYGPHEGKLAVIIDVVDNNKALVDGPD--TGVPRQMIPFKRLSLTDFKLPIQRNSRAGTISKATKEADLIAKWDASSWAKKRARKIKRASMNDFDRFQVMVARKQKSAIIAKKVSE 384
            GF+RFVE+GRVVL+ YGP  GKLA +ID+VD NK LVDGP+  TGV RQ+I + R+ LTD K+ IQRN+RA T+  A KEAD +AKW+ S WAKK A K KRAS++DFDRF+VM+A+KQKS IIA+K+ E
Sbjct:   23 GFSRFVEVGRVVLITYGPSAGKLATVIDIVDQNKCLVDGPEEITGVSRQVISYSRIQLTDLKVNIQRNARAKTLKAALKEADTMAKWEGSEWAKKLAAKSKRASLSDFDRFKVMLAKKQKSKIIAQKIKE 152          
BLAST of mRNA_D-herbacea_F_contig111.944.1 vs. uniprot
Match: A0A6V2NE85_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2NE85_9STRA)

HSP 1 Score: 167 bits (423), Expect = 2.620e-47
Identity = 84/132 (63.64%), Postives = 107/132 (81.06%), Query Frame = 1
Query:    4 FTRFVEIGRVVLVNYGPHEGKLAVIIDVVDNNKALVDGPD--TGVPRQMIPFKRLSLTDFKLPIQRNSRAGTISKATKEADLIAKWDASSWAKKRARKIKRASMNDFDRFQVMVARKQKSAIIAKKVSELQA 393
            F+R+VE+GR+VL+NYGP  GKLA IID+VD NK L+DGP   TGV RQ+I + R++LTD K+ IQRN+RA T+  A  EAD+  KWD SSWAKK A K KRAS++DFDRF+VMVA+KQKS+II+KK+ EL+A
Sbjct:    3 FSRYVEVGRIVLINYGPDAGKLATIIDIVDQNKCLIDGPTEITGVVRQVISYTRIALTDLKVNIQRNARAKTLKAAWAEADIQNKWDGSSWAKKLATKKKRASLSDFDRFKVMVAKKQKSSIISKKMKELKA 134          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig111.944.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI71_ECTSI3.310e-7084.21Ribosomal_L14e domain-containing protein n=2 Tax=E... [more]
A0A835YLN7_9STRA5.320e-5164.44Ribosomal protein L14-domain-containing protein n=... [more]
F0YD47_AURAN5.000e-5067.69Ribosomal_L14e domain-containing protein (Fragment... [more]
A0A6U0GYB4_9STRA1.240e-4865.91Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S0F6W3_9STRA1.690e-4864.39Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A6U6K629_9STRA2.380e-4861.36Hypothetical protein n=2 Tax=Odontellaceae TaxID=2... [more]
A0A7S2S552_9STRA3.360e-4863.64Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2EK65_TRICV3.750e-4864.39Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2SNQ8_9STRA2.330e-4763.85Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A6V2NE85_9STRA2.620e-4763.64Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig111contigD-herbacea_F_contig111:391665..397464 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score137.5
Seed ortholog evalue3e-30
Seed eggNOG ortholog2880.D7FI71
Preferred nameRPL14
KEGG koko:K02875,ko:K12867
KEGG Pathwayko03010,ko03040,map03010,map03040
KEGG ModuleM00177,M00179,M00355
Hectar predicted targeting categoryother localisation
GOsGO:0000184,GO:0000956,GO:0002181,GO:0003674,GO:0003676,GO:0003700,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005791,GO:0005829,GO:0005840,GO:0005844,GO:0005911,GO:0006139,GO:0006355,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006914,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009506,GO:0009507,GO:0009536,GO:0009719,GO:0009725,GO:0009733,GO:0009889,GO:0009892,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010605,GO:0010629,GO:0010941,GO:0012505,GO:0015031,GO:0015833,GO:0015934,GO:0016020,GO:0016070,GO:0016071,GO:0016072,GO:0016236,GO:0019219,GO:0019222,GO:0019439,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0030054,GO:0030684,GO:0030687,GO:0030867,GO:0031090,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0031984,GO:0032991,GO:0033036,GO:0033365,GO:0034470,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0042175,GO:0042221,GO:0042254,GO:0042273,GO:0042788,GO:0042886,GO:0042981,GO:0043043,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043523,GO:0043524,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0046483,GO:0046700,GO:0046907,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051179,GO:0051234,GO:0051252,GO:0051641,GO:0051649,GO:0055044,GO:0060255,GO:0060548,GO:0061919,GO:0065007,GO:0070013,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072599,GO:0072657,GO:0080090,GO:0090150,GO:0090304,GO:0097159,GO:0098552,GO:0098554,GO:0098556,GO:0098562,GO:0098588,GO:0098805,GO:0098827,GO:0140110,GO:1901214,GO:1901215,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903506,GO:1990904,GO:2000112,GO:2001141
EggNOG free text desc.ribosomal large subunit biogenesis
EggNOG OGsCOG2163@1,KOG3421@2759
Ec32 ortholog descriptionRibosomal protein L2 domain 2
Ec32 orthologEc-23_003620.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011,ko03019,ko03041
Exons4
Model size1219
Cds size261
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig111.944.1prot_D-herbacea_F_contig111.944.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig111 394294..396647 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927523.462808-UTR-D-herbacea_F_contig111:391664..3917661622927523.462808-UTR-D-herbacea_F_contig111:391664..391766Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig111 391665..391766 +
1690790214.5914214-UTR-D-herbacea_F_contig111:391664..3917661690790214.5914214-UTR-D-herbacea_F_contig111:391664..391766Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig111 391665..391766 +
1622927523.473453-UTR-D-herbacea_F_contig111:394254..3942931622927523.473453-UTR-D-herbacea_F_contig111:394254..394293Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig111 394255..394293 +
1690790214.605067-UTR-D-herbacea_F_contig111:394254..3942931690790214.605067-UTR-D-herbacea_F_contig111:394254..394293Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig111 394255..394293 +
1622927523.5162725-UTR-D-herbacea_F_contig111:396647..3974641622927523.5162725-UTR-D-herbacea_F_contig111:396647..397464Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig111 396648..397464 +
1690790214.6390183-UTR-D-herbacea_F_contig111:396647..3974641690790214.6390183-UTR-D-herbacea_F_contig111:396647..397464Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig111 396648..397464 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927523.4847655-CDS-D-herbacea_F_contig111:394293..3943831622927523.4847655-CDS-D-herbacea_F_contig111:394293..394383Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig111 394294..394383 +
1690790214.613228-CDS-D-herbacea_F_contig111:394293..3943831690790214.613228-CDS-D-herbacea_F_contig111:394293..394383Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig111 394294..394383 +
1622927523.4956248-CDS-D-herbacea_F_contig111:395430..3955291622927523.4956248-CDS-D-herbacea_F_contig111:395430..395529Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig111 395431..395529 +
1690790214.6212382-CDS-D-herbacea_F_contig111:395430..3955291690790214.6212382-CDS-D-herbacea_F_contig111:395430..395529Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig111 395431..395529 +
1622927523.5065384-CDS-D-herbacea_F_contig111:396575..3966471622927523.5065384-CDS-D-herbacea_F_contig111:396575..396647Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig111 396576..396647 +
1690790214.6300015-CDS-D-herbacea_F_contig111:396575..3966471690790214.6300015-CDS-D-herbacea_F_contig111:396575..396647Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig111 396576..396647 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig111.944.1

>prot_D-herbacea_F_contig111.944.1 ID=prot_D-herbacea_F_contig111.944.1|Name=mRNA_D-herbacea_F_contig111.944.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=87bp
MIPFKRLSLTDFKLPIQRNSRAGTISKATKEADLIAKWDASSWAKKRARK
IKRASMNDFDRFQVMVARKQKSAIIAKKVSELQAAA*
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mRNA from alignment at D-herbacea_F_contig111:391665..397464+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig111.944.1 ID=mRNA_D-herbacea_F_contig111.944.1|Name=mRNA_D-herbacea_F_contig111.944.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=5800bp|location=Sequence derived from alignment at D-herbacea_F_contig111:391665..397464+ (Desmarestia herbacea DmunF female)
GGGTTCACTCGGTTCGTGGAGATCGGGCGTGTGGTGCTCGTCAACTACGG CCCGCACGAGGGCAAGCTTGCTGTCATCATCGATGTTGTCGACAACAACA AGGTGTGTGTGTGTACTCTTTTGGGGCGGTTGCGGTGCCTGGCGGTGATG TACGGCTTGTTGGCAATTTTGCGGCGCTTTTTGCATTGGTACAAATCAAT GAGAGTCGACGAAGGAAGAAAGCGCTGCACACCCTTATGGCGATAAAAAT GTAGGCACGTACCGTAGTGGGGAGGATAGCCTGCTATGTGACCCCGGATC TGAGTTACGAAGAGAGATGGAGCTAGAGAAAGAATAAGGCAAACATCATT AATGGCACGAGAAATGTGTGTCTAGTATTTGAGTCCTCTGGAATGTGATG TTTTACCCAAGTTTGGTCGTTTCTGAAGGACTGACGCAACCCTCATCCCT CACTTCACTCTCCTGACACACGATAACAATACTCGTACTGATAAATAAAT AGGTAGGGCGGTGAGCTGATTGGTCCAACCTTTCACAGCCGAAAATGGCG GAGTTTCACACAAATGATTGACTTTGCGAAGCCTATGTACGCCCCTAGCC CCCCTCCTGGAGACAGAAAAATATGTCGTTTCTGCGCCTGTTGATCTACG TCAGCGTTCATATGTACTACTGTCAAAGTAGTTTGCTCGCGCACAACATG CGGTTCCATTTGTGACGTTGGTGCTATTAATGCCTTGCTATATCGAATGC CAACAGCGAATATCAAGGTGATGCAAGACACCAATCGGACACCAGCTGTA GAACATGGCAACTACTGTACTGTAGAATAAACTAAACATTAAAGTCGAAC GGGTAGGGTTTTGTGGAGATACGTTCAGGGGTTTGTGGTGCGGGGAAGGC AGATAGGTCGCAACAGCAATGCCTACTGTAATTGTAAAACTAGTTGCTTG CCAGATCGGTTGTATTGGTTGCTACCCAGTTGACAGCCCTGCAAGTATTC CATCCTAGTGAGGCGCTAACTAGTTACATGCAAGCAAGGCTTTCCACGGT GTACATAGAACCGAACCGCGGTGCGGTTTTTCTATTTGCAAAATCCTGTT ACGGTGCGGTGCGCATTATAAGAATTGGGAATTGTACCGGTGCGTTTCGG TAAAAACCGCACCGCACCGTAGCAAACTACTTGGTTTCAAAGTTTCTATG GCTTCTTCATTGTTATTGCAGTGAGAATTTAACGGTGCAGTTCAGTGCGG ATTTTTATTTTATAGAATCGTACGGTGCTGTGCGGTTTTGCCCGGAGGGG AAAATCATACGGTGCGCCTAACAAAAAACCACACACCGTAAAAAGCCTTG GTGACTCAACGCAAGACAGTTATTTTCGGTGATCTTTTGCGCTTGCTCGA AGCATGGTATTGTCAAGCCTCAAGGAAGTAATTTTTCGCATGTATACATG CCTAGTAGCGTTTCGTCAGCTCGTTTTGTTGTTTGATGCACTGGCTAGAA TGCTGGTATCCGGTGCAAGTGGTAATTGGCTCTGAAAATCTAGCTGTGGA CACAAGTAGTACGAAATGGGCGACACTTTTTTACGAGTATGTCAATGAAC TTACATACTTCGTAGTACACGAAAAAAATCAAAATTCGCGTGGAAGTTTG ACTGGAATTTTCGGGGCGACCATCAGGTCGCAACGCCCATTGTTTTTCTG AGTAAACCGGCCACACTGGGTGCCCGCGTAACCCTTTACATAGTGCACCC CGCAAGAAAGTCCGGCGCCGTGTACCCAGGCGTGTCACAGCGTGAGTACG TGCTGTGCTCTCCGGCATATATCATTATTGTGATTTTATTTTACCCTTGT GCGAATATTGATGGTTACATAGTGCACCCCGCAAGAAAGTCCGGCGCCGT GTACCCAGGCGTGTCACAGCGTGAGTACGTGCTGTGCTCTCCGGCATATA TCATTATTGTGATTTTATTTTACCCTTGTGCGAATATTGATCGTTGAAAA CAACATCACAGGTGATTTTTTGCCGTGTCCAGCAAAAGTTTGCTAATCGT TTAGAAGGAGGCACAAAAATGCATTTGGAGCGATACACTGAAGCTATTGT CAATGAGCTATGCGAATGCTGTACCCTGTGCATGATGAAACCGAGGCATG TACCGGGGGGGGGGAGTGCGGGAATCGTAGACACCTGGCGATCACGGCTT GCTCTGGCACCGCGCTGAGCGATGGGTTCCTGTGAGCTGGACTTATCGAA ACCAAGGCATATACCGGGGGTGGGTGGGTGGGTGGGAAGGGAAACACTGT GACCACAGCTTTCTCGGGCAGCCGCGCTGAACCATGACCTTCTGTCAGCC GGACTGGGAAGTCAAAGTGGTTAATACAATAAAATGGCAGTTTGGATTGT GATTTTTCAGAGATTCTGGTTGGTTTCGGTCGTAGAGTGTGAATACACTT TTCTGGCAAGGAGCCCCTCTCTCTTTTTGGCGCCGTCAAAAATTAGCAAC TCGCTTCGCTCGTAACAAAACGATGGTTGTACTCTTGTGGCGTTTTTTGA CTGTCGTAACGTGCTCGCGTTGCATGGGTAATTGTTTTAGGCGCTCGTTG ATGGACCCGACACCGGCGTGCCCCGTCAAATGATCCCCTTCAAGCGACTC TCCCTCACGGACTTCAAGCTCCCCATCCAGCGCAACTCGCGCGCCGGTAC CATCAGCAAGGCGACCAAGGTGAGTGAATTTTTTTTTTCCGACTGGATAT TTAGAATTTTCGTTGTATATGCCCTAGTAGCACCAGCGTGGGCTGTTGAG AACTTTGTAACAATTTCTAGAACTACGAGTGACCCTAACATAGGGGCCAC AATATAATGATACGGAGCAAAACGCCAGTAAATATACTGTCAGACAGGTG TGCTAAAAATTAGTATCAACTCGAAATGCTGCTTCTTTTGTTGTACCGGG TTTTGATCGTATCGTATCACAACTCGTAGTGTCTTGCTCGTGGTTTGTGG TTGCAGTTCAGGAGTAACAGTTAGCGGGATGTGTGTTCGCGAAGTTATGT GGGAATGCCACCTAGCTCCGCACAGGGTGTAACATAGGACGACCAGAGAT TGCCTAGTTTGTTTTTTTTCGTGCTTCGTAGTGTGACTGTTAAGTTTTCT GACGTCTGTTGGTGGTGTCGGGACCCTGGTCATACTTAATGCAAAAACGA GCATTGCGGTAGTTCAATACCCTCTCGGGGCATTCTGATGACGATTGCCG TGTTACTTATCTCAAATTTCCACATGTTGCTTTGCGGGGGTGGTTGCTTA GTATGCAGGCATGGATTCCGCATTTGTTTGTTGCTCCTTGATTGGTGTTT TTATTTATTTTCGTCCCCTTTATCATCGTTCCTCTATTCTTTCTCTAGCT CCATAGCTCTTCGTAACTCAGATCCGGGGTTGCATAGTAGGCGTTCCTCC CGCGTTCCCACTACGGTACGTGCCTAATTTTTATCGCGAAAAGAGTGCAG CACTTTCTTTCCTTGTTGACTTCCATCGAATCGTGAGTCACGCTCTCCCA TTTTCAGTGAAGGAATTTGGCACAGAAAAGTGCCACGGTGAATCGAACCC GAACTTCCGCCAACAGAGGCGAACACCCTAACCATCAGACCAATGCGCCA CCCCTGTCTGATATGTTGCTGATCTACTTAAACAAAATTATTTTTCAACA CAGCAGTCAACGGTAGTGTGTGGTTAATATTTTTGTGTTTGGTTTCTATG ATAATTGTGTGAGCAGGAGGCTGACTTGATCGCTAAGTGGGACGCGTCTT CGTGGGCGAAAAAGAGGGCGAGGAAGATCAAGCGCGCGAGCATGAACGAC TTCGACCGTTTCCAGGTAGGTAGAGGTTGTTTTAGCCACGCGAAGCGTTT TTGTTTGTGGTTGGTATGGACCTAAACGAGGAAACCATAAGAGTAGCTCT GTAGGATGTAGTTCGTCGACATACACGCGTGTCTGCCGCAACGGTGCTAC GGTAGTATTTAATGCTGGCCGGAGGTTATTAGGTGTGTTACATCTCGTCC GTCGTGAGGATACTGTCTGTTCTTAAGCACTGCGGAAGTTCTCCTCGCGC TTGTGTTGGCATTCCCATGAGTGTGAAATAAGAGAACCTTAAAAACAAAA TAGAGGAACCTTCGAAAAAGCTGAACCGTGGAAATTGTGTGGAGCTGAAT CTTTATTTCTACCCATCCGGCGCAGGATAACAATGGTTGAAAAAAAATGG CCCTGGGAAATGGATGGTGTCTGGACAGTAATATAAATTATGGTACAATC GCAGCTGCTTATGGCGCGTCGTATATAGAGTATTTTATTAATAGAATACT GGCGAATTGCGGCAAAAGGGACAAGGAGGCACACGGCTGTGTTTTTTTTT TCCAGTGCTTTAGTACGTGCTCCGTCGTCGTGAGAGGTGGCTGTCGCTTT GTACGAATACACTTGGTGTGAGCCCAATAGTGATGTACAACGATGCGATA AGTTGCTTGTCCCTACTGTACTCGGTAGGGATTAGGAATCAATCACACCT CCATTCCCTTCGGACCGATTATTTTTGTAGTGGTCTACCACGGTACCGTC TAGTTAAGGCCGCGTCGACCAAGGTACTACGTAGACAAGTACGATGGGCT GCGTTCGTCTCTGTGATACTCCTTTGTTTGTTTTGCGCATTTTCCACCAG ATGGTTTGGTGGTGCATGCGGGCTGACAATGTTTACGATAATCCAAGAGG GTGTAATTTGTTTTTAGTGTGTTGAGTTGTGTTGCTGAGTGTCATGGATT GTAAATTGAACTTGTTTCTTGCATTTGCTCGTGACGCTCTCTACTGTGTG AACAATTTGCTCTGTTCGTGTTTGGTTTCTTTCTTGCTCGTCGGTTGGGT TGTGTGTACAGGTTATGGTCGCTCGCAAGCAAAAGAGCGCCATCATCGCC AAGAAGGTGTCGGAGCTCCAAGCGGCGGCTTAGACGTTCTGTGATTACTT ACGGTTGCCCACGCCATGGGGTGGTGGGGGAGGGGAGATGGAATGGGATG GGGGGAGCTTTATTGCAGCCAGTGCGGAAGCAGATCGTTGTGCAAGAGAG TTTGATCGATTGAGTTTGTTGAAACTGTCGTGTGGACTTGTTTTTTGTTG CCGTCGTATTTCTGGTTTGCCTGGCTCGTGAGTTGCTTCCTGCTGTTACG GTAGTTTGACGGTGACAGCAGCATCTTTCTCCTCGTGTTGGAGTTATCTA CGTATACCTGCGTCGTCGCTGATATCCCGACGTTTCTTTGCCCTGCCACG GTTAATTAAAAAAAATGAAAACTGATCCAATTGTGGGCGATGTTCACTGG GTATGGTTTGTTTGGTATTCTCACCAGTGGTGAAATTTGTGGCCGCGCTG CGGTTGTTCGCCGCTGCATCCGAAGTCTGCGCACCATACCCGTGGCGGTT CTTGGTCATGCACACTGAGTTTTACATATATATGGAATTGCGTACATACA TGTGAACACGGTGCAGCGGGACCTTCCTGCTGAACCCCCGACGCGTATAA ATATTTAGGTCGATGCTTGACGCAGCACGTGCATGCTTACATCTCACGTC AAGAACCTTCTAGTTGTGCCTGTGCGGCAAGTACTTTTTGGCATGGTGTA CAATATAGGCTTATGTGTTCGTTTTGTCCCGAGCGAGGTATGCGACTGAA GCTGAGCTGCCAGTCTTGATCGTACGTAAGGACTTGTGTTGAGGGATTTG CACTTTGCACCCATTCATTTCTATGGCACATTAGTTGACAACAAAATCGC
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Coding sequence (CDS) from alignment at D-herbacea_F_contig111:391665..397464+

>mRNA_D-herbacea_F_contig111.944.1 ID=mRNA_D-herbacea_F_contig111.944.1|Name=mRNA_D-herbacea_F_contig111.944.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=522bp|location=Sequence derived from alignment at D-herbacea_F_contig111:391665..397464+ (Desmarestia herbacea DmunF female)
ATGATCCCCTTCAAGCGACTCTCCCTCACGGACTTCAAGCTCCCCATCCA
GCGCAACTCGCGCGCCGGTACCATCAGCAAGGCGACCAAGATGATCCCCT
TCAAGCGACTCTCCCTCACGGACTTCAAGCTCCCCATCCAGCGCAACTCG
CGCGCCGGTACCATCAGCAAGGCGACCAAGGAGGCTGACTTGATCGCTAA
GTGGGACGCGTCTTCGTGGGCGAAAAAGAGGGCGAGGAAGATCAAGCGCG
CGAGCATGAACGACTTCGACCGTTTCCAGGAGGCTGACTTGATCGCTAAG
TGGGACGCGTCTTCGTGGGCGAAAAAGAGGGCGAGGAAGATCAAGCGCGC
GAGCATGAACGACTTCGACCGTTTCCAGGTTATGGTCGCTCGCAAGCAAA
AGAGCGCCATCATCGCCAAGAAGGTGTCGGAGCTCCAAGCGGCGGCTTAG
GTTATGGTCGCTCGCAAGCAAAAGAGCGCCATCATCGCCAAGAAGGTGTC
GGAGCTCCAAGCGGCGGCTTAG
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