mRNA_D-herbacea_F_contig110.917.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig110.917.1
Unique NamemRNA_D-herbacea_F_contig110.917.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
[Close]
BLAST of mRNA_D-herbacea_F_contig110.917.1 vs. uniprot
Match: D8LTY5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTY5_ECTSI)

HSP 1 Score: 296 bits (758), Expect = 6.340e-87
Identity = 241/666 (36.19%), Postives = 291/666 (43.69%), Query Frame = 2 
Query:  182 WTLGERVPITVTLENEAGVRVQDPHSHRVWTDAE--STLVRQGMKDG-VQLKVALEGEQAGRFLLDVTSCVNSA-------------SSGGESGRQCRREDGLILDLKTGTATGVVTILPAGR------------------CARQRPLGGKGEGAIERLEKTRARGLAPSAKEFRREETDGGSIGEVSLFIAFSSEWMSRFNRPVLPLGSLPAPVCPPPRNDNDSSGGLSWGCCRSAVPRERPPPFR-----------ARESVRSVRRLHFAVSNENNNGININ-------------NKGNKNXXXXXXXXXXXXXXXXXXXXXXXXXXXENASEQVQFRAEPPLPXXXXXXXXX------------------------------------------------VIELSAVESVSMGGFFGTVWDCSLVLSSFLASLGPSAVRGKRVVELGAGCGVVSAVCAFLGASEVVATDTADLLPLLTLNLQR-SCSGNRRVKVEEYTWGSPTQEHPALAGG-DFDLILCSDLLFDPAEWGALRESLCQL----GGER----------------------SVVYLAHRTRNVQELDFFGLLL-----EGERASWRRKLLLLDGGQ-GV----------ERVSGCL-------EGMLWKRECFPDVALYELSPI 1708
            WTLGE V +TV LE+EAGVRVQ PHS+ VW + +  S+  R G+  G V L+V LEGE+A RFLLDV+S +                SS  + GRQC    GL LDL TGTA G V +LP+ R                  CA                      G     K    E    G+  EV L I+ S  W  RFNRPVLPL SLPA V  PP +       ++       V    PP  R            R    +VRRL F V      G                 N G+K                                  +     P  P                                                         +IE+ A ES S+GGFFGTVWDCSL + +FLA+LGP+++ GKRVVELGA  G +SA+CA LGASEVVATDT DLLPLLT NL R SC G+  V+  EY WGSP   HPAL+ G  FD+++CSDLL+DPA W  L ESL QL    GG +                      +VVYLAHRTRN QE +FF  LL      G  A   R+    +GG+ GV          E V GC        EG++W+  CFPDVALYELSP+
Sbjct:   37 WTLGEPVAVTVALESEAGVRVQHPHSYHVWAEPQPSSSSARDGLATGAVPLRVTLEGERASRFLLDVSSSIEEGDGVGGGGADRHDDSSHADQGRQCAPFKGLTLDLSTGTAHGWVAVLPSSRPTEPRTPPDLDHEDSTPVCACPAVAAQXXXXXXXXXXXXXXXGEENGCKPEGEEGVVAGA--EVQLSISLSPAWARRFNRPVLPLESLPALVHSPPYH-------VAAVGATPTVATPTPPTGRLEGEGQKRAVIGRSGACNVRRLRFEVGVARGGGDRDTGRRTIREEEKREENSGSKFTANEAEGATVEDSHLAGAPARKHKGDCCGGPINISLPPPPSPPTTPASSWPSLSSSPVGNAATVSGSDGDGATSGLSSCXXXXXXXXXXXXXXXXERGNGIIEVCAAESASLGGFFGTVWDCSLKMGAFLAALGPASLEGKRVVELGAATGTLSALCAALGASEVVATDTKDLLPLLTFNLARNSCPGSLNVEACEYDWGSPVGHHPALSRGVGFDVVICSDLLYDPAGWEPLLESLRQLLAAAGGRQRQPARGRGAXXXXXSPTPPSAPAVVYLAHRTRNPQESEFFDALLGQEGGRGPAAEASRRGGPPEGGEEGVLSFRCRRLSEEGVGGCHDEGCRGGEGLVWRGGCFPDVALYELSPV 693
[Close]
BLAST of mRNA_D-herbacea_F_contig110.917.1 vs. uniprot
Match: A0A6H5JS56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS56_9PHAE)

HSP 1 Score: 256 bits (653), Expect = 4.120e-72
Identity = 226/672 (33.63%), Postives = 279/672 (41.52%), Query Frame = 2 
Query:  236 VRVQDPHSHRVWTDAE--STLVRQGMKDGV-QLKVALEGEQAGRFLLDVTS------CVNSASSGGESG---------------RQCRREDGLILDLKTGTATGVVTILPAGRCARQRPLGGKGEGAIERLEKTRARGLAPSAKEFRR--------------------EETDGGSIG-EVSLFIAFSSEWMSRFNRPVLPLGSLPAPVCPPPRNDNDSSGGLSWGCCRSAVPRERPPPFR-----------ARESVRSVRRLHFAVSNENNNGININNKGNKNXXXXXXXXXXXXXXXXXXXXXXXXXXXENASEQVQFRAE--------------PPLPXXXXXXXXX------------------------------------------------------------VIELSAVESVSMGGFFGTVWDCSLVLSSFLASLGPSAVRGKRVVELGAGCGVVSAVCAFLGASEVVATDTADLLPLLTLNLQR-SCSGNRRVKVEEYTWGSPTQEHPALA-GGDFDLILCSDLLFDPAEWGALRESLCQL---GGER-----------------------SVVYLAHRTRNVQELDFFGLLLEGERASWRRKLLLLDGG------QGV----------ERVSGCL-------EGMLWKRECFPDVALYELSPI 1708
            + +  PHSH VW + E  S+    G+  GV  L+V LEGE+A RFLLDV+S      CV +  S GE+G               RQC    GL LDL TG A G V +LPA R    R         ++  + T        A                         E  DG   G EV L I+ S  W+ RFNRPVLPL SLPA V       +D +  ++       V    PP  R            R    +VRRL F V      G    + G +                             + +E    + +              PP P                                                                     ++E+ A ES S+GGFFGTVWDCSL + +FLA+LGP ++ GKRVVELGA  G +SA+CA LGASEVVATDT DLLPLLT NL R SC G+  V+  EY WGSP   H AL+ GG FD++LCSDLL+DPA W  L ESL QL    GER                       +VVYLAHRTRN QE +FF +LL  E            GG      +GV          E V GC        EG++W+  CFPD+ALYELSP+
Sbjct:    1 MNIPHPHSHHVWAEPEPSSSSAHDGLAAGVVPLRVTLEGERANRFLLDVSSSIEEGECVGAGGSCGEAGGGADRHVDSSHADQGRQCAPSKGLTLDLSTGMAHGWVAVLPASRPTEPRT-----PPDLDHDDSTPVCACPAVAAXXXXXXXXXXXXXXXXGEENGCEPEGEDGVVAGAEVQLSISLSPAWVRRFNRPVLPLESLPAFV-------HDPAYHVAAVGATPTVATPTPPTGRLEGEGQRRAVIGRRDACNVRRLRFEVGVARGGGDR--DTGRRTPGEEERREEKSGSKFTPNEAEGATVEDSHLAEAPSRKHKGGYCRGPRNTSLPPPPSPPATPAWSRPSLSSSPVGNAPAMSGSEWDGATGGLSSCSAXXXXXXXXXXXXXXXXXXXXXXNDDKHGNKIVEVCAAESASLGGFFGTVWDCSLKMGAFLAALGPGSLEGKRVVELGAATGTLSALCAALGASEVVATDTKDLLPLLTFNLARNSCPGSVNVEACEYDWGSPVGHHLALSQGGGFDVVLCSDLLYDPAGWEPLLESLRQLLAAAGERQRQPTRRXXXXXXXXXXXXXXXXAVVYLAHRTRNPQESEFFDVLLGQEGGRGPAAEASQRGGPREGCEEGVLSFRCRRLSDEWVGGCHDEGCRGGEGLVWRGGCFPDIALYELSPV 658
[Close]
BLAST of mRNA_D-herbacea_F_contig110.917.1 vs. uniprot
Match: A0A6A6M872_HEVBR (Uncharacterized protein n=2 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6M872_HEVBR)

HSP 1 Score: 99.8 bits (247), Expect = 5.720e-20
Identity = 61/134 (45.52%), Postives = 81/134 (60.45%), Query Frame = 2 
Query: 1127 VWDCSLVLSSFLASLGPSAVRGKRVVELGAGCGVVSAVCAFLGASEVVATDTADLLPLLTLNLQRSCSGNRRVKVEEYTWGSPTQEHPALAGGDFDLILCSDLLFDPAEWGALRESLCQLGGERSVVYLAHRTR 1528
            +WD +LVLS +LA+  P   RGK V+ELGAG G+     A LGA  VV TD A LLP L  N++ +  GN+ V+V E  WGS          G+FD++L SD+ FDP + GAL  +L ++ GERS V+ A   R
Sbjct:   35 LWDSALVLSQWLAT-SPLDFRGKSVLELGAGTGLPGLTAARLGARLVVLTDVAPLLPSLLRNVEANELGNQ-VEVRELVWGSDESLSQIGDLGEFDVVLMSDVFFDPEQMGALGSTLKRVCGERSRVWAASEVR 166
[Close]
BLAST of mRNA_D-herbacea_F_contig110.917.1 vs. uniprot
Match: A0A5D6YE87_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YE87_9STRA)

HSP 1 Score: 105 bits (261), Expect = 6.180e-20
Identity = 74/195 (37.95%), Postives = 99/195 (50.77%), Query Frame = 2 
Query: 1079 ELSAVESVSMGGFFGTVWDCSLVLSSFLASLGPSAVRGKRVVELGAGCGVVSAVCAFLGASEVVATDTADLLPLLTLNLQ--------------RSCSGNRRVKVEEYTWGSPTQEHPALAGGDFDLILCSDLLFDPAEWGALRESLCQLGGERSVVYLAHRTRNVQELDFFGLL---LEGERASWRRKLLLLDG 1612
            E+   ES    G  G +WD  LVL+ +LA   P  V GKRVVELG+G G+V  VCA LGA   + TD A+++PLL  N+                + SG  R     + WG+   E  ALA    D+++ SD+++DP  +  L  SL  L  ER+VV +AHR+RN  E  FF LL      ER  W  +     G
Sbjct:  343 EVLLAESPGNLGIGGKLWDSCLVLARYLALHRPL-VAGKRVVELGSGLGLVGIVCALLGARATL-TDVAEVVPLLRYNIDLNFPASSSDSXXXGSAASGGGRPTAATHLWGT---EPAALATPHPDVVVLSDVVYDPEGYAPLVASLVALTMERTVVLMAHRSRNPMEHQFFELLGAQFALERVDWASEFAAAGG 532
[Close]
BLAST of mRNA_D-herbacea_F_contig110.917.1 vs. uniprot
Match: A0A485LH46_9STRA (Aste57867_21306 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LH46_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.260e-19
Identity = 60/160 (37.50%), Postives = 94/160 (58.75%), Query Frame = 2 
Query: 1082 LSAVESVSMGGFFGTVWDCSLVLSSFLASLGPSAVRGKRVVELGAGCGVVSAVCAFLGASEVVATDTADLLPLLTLNLQRSCSGNRRVKVEEYTWGSPTQEHPALAGGDFDLILCSDLLFDPAEWGALRESLCQLGGERSVVYLAHRTRNVQELDFFGLL 1561
            ++  ES    G  G +WD SL+L+++LA+  P+ V G+RV+ELG+G G+V   CA L  + VV TD  D++PLL  N++ +  G  R  V+   WG+      A     FD++L SD+++DP  +  L  SL +L    + + + HR+R+ QE DFF +L
Sbjct:  302 INLAESPGNLGIGGKLWDSSLILTAYLAAH-PTIVTGRRVIELGSGLGLVGLACACLDVASVVLTDMDDVVPLLAYNIELNGLG-ARAHVQPLCWGTSA----AHLRPPFDVVLLSDVVYDPHGYKPLINSLRELATPETTILMGHRSRHPQEKDFFDML 455
[Close]
BLAST of mRNA_D-herbacea_F_contig110.917.1 vs. uniprot
Match: A0A6G0XVS3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XVS3_9STRA)

HSP 1 Score: 102 bits (255), Expect = 2.200e-19
Identity = 57/160 (35.62%), Postives = 94/160 (58.75%), Query Frame = 2 
Query: 1082 LSAVESVSMGGFFGTVWDCSLVLSSFLASLGPSAVRGKRVVELGAGCGVVSAVCAFLGASEVVATDTADLLPLLTLNLQRSCSGNRRVKVEEYTWGSPTQEHPALAGGDFDLILCSDLLFDPAEWGALRESLCQLGGERSVVYLAHRTRNVQELDFFGLL 1561
            ++  ES    G  G +WD SL+L+++LA+  P  VR +R +ELG+G G+V   CA+LG   V+ TD  D+ PLL  N++ +   ++ V V+   WG+  +    +    FD++L SD+++DP  +  L +SL  L    + + + HR+R+ QE +FF LL
Sbjct:  300 ITLAESPGNLGIGGKLWDSSLILTAYLAAH-PDIVRHRRAIELGSGIGLVGMSCAYLGVKTVILTDIDDVAPLLAYNVRLNDLQDQ-VAVQALWWGTSVE----MLEPPFDVVLMSDVVYDPTGYEPLVQSLKDLSTPSTTILMGHRSRHPQEKEFFNLL 453
[Close]
BLAST of mRNA_D-herbacea_F_contig110.917.1 vs. uniprot
Match: A0A446RN79_TRITD (Uncharacterized protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446RN79_TRITD)

HSP 1 Score: 93.2 bits (230), Expect = 5.740e-18
Identity = 59/139 (42.45%), Postives = 78/139 (56.12%), Query Frame = 2 
Query: 1127 VWDCSLVLSSFL---ASLGPSAVRGKRVVELGAGCGVVSAVCAFLGASEVVATDTADLLPLLTLNLQRSCSGNRRVKVEEYTWGSPTQEHPALAGGDFDLILCSDLLFDPAEWGALRESLCQLGGERSVVYLAHRTRNV 1534
            VWD ++VL+ FL   A  G  +VRG R V+LGAGCG+VSAV A LGA  V+ATD  D + LL  NL+ +        V E  WG   +  P       +L+L SD+++     G L  +LC+L G R+ V LA   RNV
Sbjct:   72 VWDSAVVLAKFLEHAADAGLLSVRGARAVDLGAGCGLVSAVAALLGA-RVLATDLPDRVRLLRKNLEENVGDGGSAAVAELVWGDGYELDPPP-----ELVLGSDVVYSEEAVGDLLATLCRLAGPRTTVLLAGELRNV 204
[Close]
BLAST of mRNA_D-herbacea_F_contig110.917.1 vs. uniprot
Match: UPI00189A6BD6 (protein N-lysine methyltransferase METTL21A n=1 Tax=Nematolebias whitei TaxID=451745 RepID=UPI00189A6BD6)

HSP 1 Score: 92.4 bits (228), Expect = 1.400e-17
Identity = 55/150 (36.67%), Postives = 89/150 (59.33%), Query Frame = 2 
Query: 1112 GFFGTVWDCSLVLSSFLASLGPSAVRGKRVVELGAGCGVVSAVCAFLGASEVVATDTADLLPLLTLNLQRSCSGNRRVKVEEYTWGSPTQEHPALAGGDFDLILCSDLLFDPAEWGALRESLCQLGGERSVVYLAHRTRNVQELDFFGLL 1561
            G    VWD ++V+S +L  LG   ++GKRV+ELGAG G+V  V A LGA  V  TD    L LL+ N++ + + ++ V V E +WG   + +PA   G FDL+L +D+++    + +L ++L  L  + +VV LA + R  ++ +F  +L
Sbjct:   41 GVAAVVWDAAVVMSLYL-ELGSIELKGKRVIELGAGTGLVGIVAALLGA-HVTITDREPALDLLSANVKTNLTPDQSVVVSELSWGMGLEHYPA---GGFDLVLGADIIYLEDTFQSLIQTLEYLSSDATVVLLACKIRYERDTNFLSML 185
[Close]
BLAST of mRNA_D-herbacea_F_contig110.917.1 vs. uniprot
Match: A0A8B8M0K5_ABRPR (protein N-lysine methyltransferase METTL21A-like n=1 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8M0K5_ABRPR)

HSP 1 Score: 91.7 bits (226), Expect = 2.580e-17
Identity = 52/134 (38.81%), Postives = 80/134 (59.70%), Query Frame = 2 
Query: 1127 VWDCSLVLSSFLASLGPSAVRGKRVVELGAGCGVVSAVCAFLGASEVVATDTADLLPLLTLNLQRSCSGNRRVKVEEYTWGSPTQEHPALAGGDFDLILCSDLLFDPAEWGALRESLCQLGGERSVVYLAHRTR 1528
            VW+ +++LS ++ +     +RGK+V+ELGAG G+     A LGA+ V+ TD   L+  L  N++ +  GN  VKV +  WG    E P    G+FDL+L SD+LFDP + GAL ++L  + G+ + V+ A   R
Sbjct:   36 VWESAIILSEWMTAQREMDLRGKKVLELGAGAGLPGLTAAMLGANHVLLTDVEPLIKALVRNVEANGLGNV-VKVRKLVWGR--DESP----GEFDLVLMSDVLFDPEQMGALAQTLKSVCGDHTRVWAATEVR 162
[Close]
BLAST of mRNA_D-herbacea_F_contig110.917.1 vs. uniprot
Match: D8RCM8_SELML (Uncharacterized protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RCM8_SELML)

HSP 1 Score: 91.3 bits (225), Expect = 4.280e-17
Identity = 60/154 (38.96%), Postives = 80/154 (51.95%), Query Frame = 2 
Query: 1127 VWDCSLVLSSFLAS--------------------LGPSAVRGKRVVELGAGCGVVSAVCAFLGASEVVATDTADLLPLLTLNLQRSCSGNRRVKVEEYTWGSPTQEHPALAGGDFDLILCSDLLFDPAEWGALRESLCQLGGERSVVYLAHRTR 1528
            VWDC+LVL+ +L S                    LG    + KRVVELGAG G+     A LGASEV+ TD A LLP L  N++ +     RV+V E  WG+   + PA      D +LCSD+L+D     AL ++L  L GE + + LA+  R
Sbjct:   30 VWDCALVLTHWLDSIAAIGESGGADIAPVSAELGLGHHGFKDKRVVELGAGTGLPGMAAALLGASEVILTDRAGLLPCLRRNVEAN-QLESRVRVLELEWGADCSQVPA----PVDFVLCSDILYDIEAVPALAKTLLDLSGESTRILLAYELR 178
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig110.917.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTY5_ECTSI6.340e-8736.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JS56_9PHAE4.120e-7233.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6A6M872_HEVBR5.720e-2045.52Uncharacterized protein n=2 Tax=Hevea brasiliensis... [more]
A0A5D6YE87_9STRA6.180e-2037.95Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A485LH46_9STRA1.260e-1937.50Aste57867_21306 protein n=1 Tax=Aphanomyces stella... [more]
A0A6G0XVS3_9STRA2.200e-1935.63Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A446RN79_TRITD5.740e-1842.45Uncharacterized protein n=1 Tax=Triticum turgidum ... [more]
UPI00189A6BD61.400e-1736.67protein N-lysine methyltransferase METTL21A n=1 Ta... [more]
A0A8B8M0K5_ABRPR2.580e-1738.81protein N-lysine methyltransferase METTL21A-like n... [more]
D8RCM8_SELML4.280e-1738.96Uncharacterized protein n=2 Tax=Selaginella moelle... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig110contigD-herbacea_F_contig110:677999..688863 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score251.5
Seed ortholog evalue7.7e-64
Seed eggNOG ortholog2880.D8LTY5
Hectar predicted targeting categoryother localisation
EggNOG free text desc.peptidase activity, acting on L-amino acid peptides
EggNOG OGsCOG3897@1,KOG2920@2759
Ec32 ortholog descriptionNicotinamide N-methyltransferase-like
Ec32 orthologEc-12_003880.1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size2053
Cds size1428
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig110.917.1prot_D-herbacea_F_contig110.917.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig110 685486..688542 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927517.9198132-UTR-D-herbacea_F_contig110:677998..6782311622927517.9198132-UTR-D-herbacea_F_contig110:677998..678231Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig110 677999..678231 +
1690790212.447984-UTR-D-herbacea_F_contig110:677998..6782311690790212.447984-UTR-D-herbacea_F_contig110:677998..678231Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig110 677999..678231 +
1622927517.937961-UTR-D-herbacea_F_contig110:685414..6854851622927517.937961-UTR-D-herbacea_F_contig110:685414..685485Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig110 685415..685485 +
1690790212.461313-UTR-D-herbacea_F_contig110:685414..6854851690790212.461313-UTR-D-herbacea_F_contig110:685414..685485Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig110 685415..685485 +
1622927518.0166085-UTR-D-herbacea_F_contig110:688542..6888631622927518.0166085-UTR-D-herbacea_F_contig110:688542..688863Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig110 688543..688863 +
1690790212.496538-UTR-D-herbacea_F_contig110:688542..6888631690790212.496538-UTR-D-herbacea_F_contig110:688542..688863Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig110 688543..688863 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927517.9814725-CDS-D-herbacea_F_contig110:685485..6856201622927517.9814725-CDS-D-herbacea_F_contig110:685485..685620Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig110 685486..685620 +
1690790212.4708407-CDS-D-herbacea_F_contig110:685485..6856201690790212.4708407-CDS-D-herbacea_F_contig110:685485..685620Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig110 685486..685620 +
1622927517.9963665-CDS-D-herbacea_F_contig110:686902..6878111622927517.9963665-CDS-D-herbacea_F_contig110:686902..687811Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig110 686903..687811 +
1690790212.4788976-CDS-D-herbacea_F_contig110:686902..6878111690790212.4788976-CDS-D-herbacea_F_contig110:686902..687811Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig110 686903..687811 +
1622927518.0068076-CDS-D-herbacea_F_contig110:688158..6885421622927518.0068076-CDS-D-herbacea_F_contig110:688158..688542Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig110 688159..688542 +
1690790212.4871228-CDS-D-herbacea_F_contig110:688158..6885421690790212.4871228-CDS-D-herbacea_F_contig110:688158..688542Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig110 688159..688542 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig110.917.1

>prot_D-herbacea_F_contig110.917.1 ID=prot_D-herbacea_F_contig110.917.1|Name=mRNA_D-herbacea_F_contig110.917.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=476bp
MKDGVQLKVALEGEQAGRFLLDVTSCVNSASSGGESGRQCRREDGLILDL
KTGTATGVVTILPAGRCARQRPLGGKGEGAIERLEKTRARGLAPSAKEFR
REETDGGSIGEVSLFIAFSSEWMSRFNRPVLPLGSLPAPVCPPPRNDNDS
SGGLSWGCCRSAVPRERPPPFRARESVRSVRRLHFAVSNENNNGININNK
GNKNMNNNIITNYTSNNNSNHNRDRGNNGGHENASEQVQFRAEPPLPPPP
PPPPPPVIELSAVESVSMGGFFGTVWDCSLVLSSFLASLGPSAVRGKRVV
ELGAGCGVVSAVCAFLGASEVVATDTADLLPLLTLNLQRSCSGNRRVKVE
EYTWGSPTQEHPALAGGDFDLILCSDLLFDPAEWGALRESLCQLGGERSV
VYLAHRTRNVQELDFFGLLLEGERASWRRKLLLLDGGQGVERVSGCLEGM
LWKRECFPDVALYELSPIRRAGGQG*
back to top

mRNA from alignment at D-herbacea_F_contig110:677999..688863+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig110.917.1 ID=mRNA_D-herbacea_F_contig110.917.1|Name=mRNA_D-herbacea_F_contig110.917.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=10865bp|location=Sequence derived from alignment at D-herbacea_F_contig110:677999..688863+ (Desmarestia herbacea DmunF female)
AAGTGTACTCGGACAGCTATCGCAACACAGACCCCCTTCATGCAGATCGC
GTCAATCTGCGCCATCCGTTGTAATTTTCTACGAGTATCATACCTCGCTT
GGTGATTCGTGCGCAGCGAATTAATTGATTCATCCGCATGTATCTCTCCC
GCAATATGTCTCGGTTATTCCCGCAGATCGTTGGACTCTAGGGGAACGGG
TGCCCATCACTGTCACACTCGAAAATGAGGCAGGTGAGTTAGAGACTAGC
GGGTTTACGATCGCATACTCGTACAGAGAAGAACGATAAACCTATCTCAG
GATTGTCCCAAACGCTTGACAGCGCAGAGTTCAACCATTGTTCCTCGCCC
CCGGATCTTCGCGGAAAAAACCGCACTTTTTTTTTTTTTTTTTCCGTCTC
ATATCTCCGCCCTATTCTTTCTCTAGCTCCATCTTTCTTCGTAACTCAGA
TCGGTGGTCACGTAGCAGGTGCTCCTCCCGCATTCCCACTACGGTACGTG
CCTACATTTTTGTCGCGAGAAGAGTGCAGCACTTTCTTCCCTCGTCGACT
TTCATCGAATTGTGCTTACTCACGCTCTCGCGTTTTCCGCGACTGAAGAT
GGCACAGAAAAGTGCCACCGGGGATCGAACCCCCAACTTCCGCCAACAGA
GGTGAACACCCTAACCACTAGAAGAGCATTCGGCCACCCTTTAAATACAA
GTAACAAAAACGGCGTTACATTTCATTGCAAATAACACCGTACTTTTTGG
TGTTTTTCGCTTGGTTCCAGTATTTTGGAGCCTGGGTGTACGTTTTGTTT
CCACTTTTCCACCCATATGGGTACCTGGAATTTTTTCGGTTGCGAGCCGT
TGTGGAAAAAACACAACCAACCTTAAACGTTGTGGCGGGCATCCACAACG
TTCCGCAACCTATCATTTGTCCTCCTCATCTCTCAATTAATTATTATTTT
TTATACTTCGAAGTATATATTTTTCTTATCTTCGCTCTATTCTTGCATTG
TACAGTATTATTTGTCTTCCCTGTTTACCATACTTAATTAAGTAACGCAG
CGTGTTTCCGACCCACATCCATATATATGGTAAGACCTTCCTAATACAGT
AATATCGTTTGGGTAGATTGCGGGCCGTTGTGGAAAAAACACAACCAACC
TTAAAACGTTGTGGCGGGCATCCACAACGTTCCGCAGCCTACCAAGTGTC
GCCTTGCCTAGGTCCTGGACTGGACATTATACAACGTCTAAGGTTCTGTG
GTAAATTAGTTGTACAGGGTCCTACAACATTGTTGTTTATAAACGTTTGT
TTGTATGATATATGATATACATACACTACATTCAAGACATTAATGAATTT
TCACTTTCGTAGGAGACGATTATGTGTGCCATACTGTACTGCTGTACTAC
TACTGTAGTCCTGCTGCGGTACTACTATCTATCGGAGACCGTGCAATATT
GGCAAACTGCGCTTAGATAGAAGAAACGCCTACCACTGGGGGATGATACA
TATATATGTATTTTCTCTCACTAAGGAGACAATAATGAATAATATATAAA
GGTAAGTAATTATAGTTTGAATTCATTAATTTTCACTCACGACGGAGACG
ATATATCAGGGGCAACGATGTTCATTGTGACGGCGTCGTGAAGCAAACAT
GCACTTGAGCACGATTTTGCTTGAAAAATGACGGGTCACGTTTCACGCGG
ATAGGTGTCACTCCTCCGATACTGCATTGACTTTGCTCAAACGTGGCATG
TCGGTTGCAGCTAATCATGAGTTATCGTGCAATAGCCCGTAGGTCTCCGT
GGGCTGTCTGGGGGTGTCGCCGTGCGACGCAAATGTAGGTACACCTCTCA
CAACAACTACTCTGACCACCACACTTTCTGCCTCTTCATTCTGGCAACGT
GATGCACAGTCCTGTTTGTTTCTCTTCGAAGATTGAATGGATCCTGGGGG
AAAATTCCAGGTACCCATATGGGTTGATAAGAGCCGTCCACCCAGACTGT
TATTATACTACTATTTCTGAGCCATGCACCTACGACGAAGTTTGTGTTCG
TTGCCTTGCGGATTTCCCCTCACACCCTTGGCATGCGCCCTGAAATCCTG
CGAGCCTGCCGGGCAGGTCACTGCCCGGTAGGCGCCTTGTATTTATTTAT
CGGTGATGGCCAAAACAAGGTATACCTTGCTGCTAAGTGGCCATAACAAG
GTGTAGGTTAGAACGAATACAACTGAGGCCGAATGGAGCCATATGATTGG
CCGAAACTGCGGAGCACCTTGTCCTGGCCGATATTTCGGACGGTATACCT
TACTTTGGCCACTCAATTCTCGGACGCTACCTTGTTTGGCCACCCCCTCA
CCCTGTTTTGGCCACCTCGCGAGAGGGCTGTTCGCCCAACCGACACACGC
ACAGAGACCTCTCGCTGTCGATGACACATGCTACAGGTGAGGTAGTTGTA
CATGGGGGTAAACGACAACACGCTTCTGCTGTCGACACCCCGATTATACT
GACTCTAACGGTGAGCGGACAGGTCAGTCAGTCACGAAATTGGACTGAAG
AATATTCACGGAACTCTCAGTGTCGACAGCAGAGGCATGTTGTCATTTAC
CCCCATGTACAACTACCCCACCTGTAGAAGCGTGTTGTCCTTTACCCCGA
TGTACAACTACCCCACCTGTAGCATGTGTCATCGACAGCGAGAGGTCTCT
ATGCGTACGTCGGTTGGGCGAACAGCCCTCTCGCGGGGTGGCCAAAACAG
GGTGAGGGGGTGGTCAAACAAGGTAGCGTCCGAGAGTTGAGTGGCTAAAG
TAAGGTATACCGTCCGAAATGTCGGCCAGGACAAGGTGCTCCGCAGTTTC
GGCCAATCCTATGGCTCCATTCGGCCTCAGTTGTATTCGTTCTAACCTAC
ACCTTGTTTTGGCCACTTAGCAGCAAGGTACACCTTGTTTTGGCCATCAC
CGTTTATTTATTTAGTTATTTTTCCCGTCCCATTTATTATCTTGGCTCTA
TTCTGCTGTCCGACTATTGCGGTACTAAACTGTTGTATTGCATCTTTGAA
CCATTATGTTTTGCCGCAGAGTTTACCGTCCCGATCCACCAGAACGCAGC
ATTGTCGTGCCACTGGCCCACTGCACACTGTTCGTAGTACAATTACAATT
ATTGATTTCTCGGTATGTTGCACGATCTGCAATTAATTTGCAATTGACTG
CTACGCCGTACGATGGTGTTTTGGTGTTGTTTTTAGTACAACTTACTTAA
CAAATTAATTGCAAATCTGTGATCTGTGCTGCTGTGTGATATACGAATCG
TGCGGTTGACCAGCACTCTACGCTCTGCGATAGCCACACCAGCCAGCTCT
CCTCTCCTCTCCTCTCCTCTCCTCTCTTCTCCTCGACATGCCTGAAGCTC
ATGGCCGGTGCCCGCGCTATACGATTGTTTTTGGTGACGTTCCTGTTGTT
GTTGCGTCTTGAGCTTCTGCAATAATTTTTGTTTTTTTGGTGGTCCTACT
AGAAGCGAGCTCTATAGACTAGATATACTGTCTATCTATCTGGTGTACAA
CTAACTACTGTTGCACAATTCAGCTGTCCGCTTTCCATTTGCTTTGGCAC
CGGTTGCATAGATAGGGCACTTTTATTGATGCGCCAAATCCAAATTATTT
GATTTTATAGTGCCCACATGCGGGGGAATTCGGGAGAATGTTAAAGCAAG
AACCAATCAGAAGTGAGCTTTAATGTGCATTAGTGATGTGCGAAACTGTG
CGATTGGTCACTTCTGCAGTTTTTTTTTGTTTTTTTTCCGTCCCATTCAC
TTCTGCCGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATTGATTCAT
CACATTAGCTCATCGTCCAAGATCTAGCCCGTGGTCACAAAAGTGCTGAG
CCCTATGTAGAAAGATCACTTCTGCCGATTGTTTCGCCGCAAACATGCCC
GAGTCAGGATCGCAGTCAGCCCAACGCAGCACGGTTACCCTCCCTTCTGC
CAGCGCGTACCAGCGAGCACTAGGCGATGTGGCACTTGAATTTGGTAGTA
TAGCTCCAACAACTGCTGTTGATTATCCGCCTCAGTTGGTTGCCGCCAGC
CGCCAGCGGTAGAGCCATGCAATTGGTCATGCAATTAACGGGTCTTGCAA
CTTTTGCTGTACTCGTCGTCATAGTGCAAGCGCTGTCCCGACTCCAATAC
CTACCTCCTTGGACCAAAACCAAGCATGGTGGAGCCGAGCGCTCCATCGC
CGCTAGACACAGCCACGGTGCAAGAGAACGGCGAGATAACTTCCACTCCC
AGGTGATGGTGCTTGTCGCCAGTGCAGCGTACGTGGATAGGCTATATACA
AAAGACTACTGCTTGGTCGACGCAACCCTCGCGCATTCCCAAAGCAAAGA
GCTTCGGACGACATCGCAAGCCGGGGGCGGGTTTCCCTACAACGCGACGG
GGCTGCCCTCTTCTGCCACCAGCGCAGCACAGCACAACATAGGTACGCGT
CTACAGATTATACATAAGAGACGATAGTATCAAGTAGTGTAGTTCTACCG
TACTACTACTGCTGTGTATGTATTGACTGTACAGCAGTAGATAGATGCTG
TCCGTAATTGAGTACTCCGTTTGATTTTTCTAATTTGAAAATGTCCATGT
TTACCGATGCTGCTGCGCCTGCCGCCGACGTTTGCGCATGTACTCGCCTG
TAAACTACTTTTGGTGGGTTAACTCACTCTCTGTCGACCACTTTTGTCTC
AAGAAAATGTTCATGTGGTCACCGGAGTACATTGGGGTGAGTCGATCACG
TCCTACGTCCGAACTGTGGTCGTGCTCGCGGGGAGCCGGGGTGCTGGATA
ATACTACGAGTATACCTCATCGCGGTTTTAGGTACGTCCGTCGGTGGATG
GTTACCGGACTAGGGGGGGTGTTGTCCCTCCACCGTGCGTGACGAGACAG
GTGGATAGATTGACCTGAGTGAAAGTTGGCAGATACTCATCATCACAACA
AATAAATAGTAGAGCTCCACGGCGCCTTCAACTCGCCGCGTTTTCGCTTG
TTCTTTGCGACAGGTACGCGGCTGCTAGGCTTGAAACCAGACCAAGGTTG
TTGGCGACGCGCTACTGGATCTTCCAACTCCTAGGATGGGAGTGTTTCGG
CCAGAATGGACGTCTACGTAGCATACCCGTTCTCGATTATTGTGGCAAGA
CCTAGCGCCATCAGCAGAACACGTGTTCGTCGCGCGGCAGATGGTCTTAC
CGCGGACAAGGGTTGTTCGGCGTCTTCGAAGTTAGTTCGTCAGTCGGTCG
TACATGGAGACGTCCATGAAAATTCACCGCCCTTCTGGTTCGTTATCGTA
GTCGACCAACGCCTGCGTAGCCGGTGGTAGATGTTATTTGGAAGTGGTGA
GAAGCAAATGTATACACCTCTCGGTTTAGAGCGTTCGCCAATCCGCAGCG
CTTCAACGGCCGCCATCCATCGGACCTCTAGCTGCGAGATATCTGACACA
AGAAGAAGTCATGGTCGATGTACAGGGTAGAAGGGCTCCGTTGTGCTCTA
TACCGCACGTTCTATTACGTAGGAAGTGTAGGCGATAGCAAGTAGTACAG
TAGTAGTCGAAATGCACATCATGGCAGAGGACGAGCAACAATAGGGATGC
CATACTTTTATCTGAGGATCGATAGATTGCGCGGCGACCGCAGTATCGAG
AGCAAATAATGTATTTGAAACGCATAAAAAATAGGGGGGAAAAAAAACAA
CACAAAGGGGAAAAAAAAGGAAAATAAAGGTCTGCGCGTGATTCGAACCC
ACGTACTCACGCTACGTGCTCGATTTTTTTTTTTATTGGCAAAAAAGTAC
CCCTATTTATGATATCGAAGCCGTTGCTTTATCCCCAGCATTGTCTCGAT
TATCTCGTCTTTCGTTTTGCAATTGGTTGCGGTGCGTTGCTTCTTTTGTC
TGTAGTGCTATTGTTGTTGCGTTTGGAGCACTTCCTACTTCCTATTGCCA
CGGTTCTGTGCTGTTGTTGTTGTACAGCCGTGGTATGATATAGCGTACGG
AGCTCGCGTCTATTTTGATATTTTGCTTCACGCTTTGTTTGCATGGTTCA
GTTCGTTGTTGTCCCACTTGGGCATACTGCTTTTAGTACATGCAATTAAT
TGCAAAGGTTATTTTTCCAGATCTGGTGTGATACTCATGTTGCTGTTGCA
CTGTTGTCTGTAGCACCGCCTAGCTTGCCTCTAGACATCACTGCCTCCTC
TCCTCTACATGTCTGAAACGCGTGGCCTGTGCATGTGCTACGTATACTGT
TGTTTTTGGTGAAGTTGTTGTTGGCTTTGAGCTTCGCAGTGACTACTGTT
GTACTGTAATTTGTTTTTTGTTGTTGTACTATCTATATGCTGTTTGTTGT
ATATATAGACTATACCGCGGTGTGTACGTAGCGTTTTGTGCTTCGCTTTC
TTTTTTGCTCCTCCTTCCGTTCCTCTCCACTCTCCACACTCCAAACAATG
TACCATATCAATATATGGGTATGTCCTTTAGCCTTGGCGATTCGCTTTCA
TTCTTTGAGCGTTGCGGCGTCAGCCGCAGAAACCTTGTAGTTTATACTAC
TGGTGTTATGTGCTGGAGTTGAATGTCAAACCGTTGCTGTTTCGAGTATA
TTGAATCCTCGTGCATAACGCAAACCGAGTAAAAAAGTAGACCCTCCGTG
CATCTTGGGTCGAATGCAATGCACGACGTACTCTGCCTGTTTCTACGAGT
AATGAATTTTACAATGCAGCGACAAGTTAACCACCGCATGGTCGTAACTG
CCTGTTGTGATCATAGCATTATGGCATCTATCGGTGAAAAACATATCGTA
CCTTGGGGTGTCATTTCATGCAACAGGCAAAATATGCCTACTCGTACACC
ACGTAAACCCAAAAATTTGGCAAGTGTCTTTTTGATTGCTCGAACACCTG
GCAATTGATTATTTTCAGGTCCCCTCGAAAACACCCGTCTGCAATATTTC
AATGATGGTTTTATCTTCAGCTTATCATACACCGATAGTGTTGATGCTCG
CTTGCACAACAACAGTAGTAGTATAATATTATACGAGTATTATTGACCAG
TTGGACGAAAGTTATGGTTGACCAATCATATTACAGTAACAACATCCAGG
AGCTTTTCACCCTCACACTCGCGATACAAGAGCGACACAGAGCGAACAGC
ATGTTTCCTCGATTTCAATGCCGAAGGCGTGTATTTTGACCCCCGCCAAC
GGTGCCGTAGAATTACTAGTACCGTGGGTGGTTGGGGGTTGGGTCGACCC
GGCACAAAAACTGAAAGCAATTAAGTATAAGTGTGTCAACCGTTAGATTT
TGTCTACTTGGTAACCAACCCTCCGCTTGCACGCCAAACGAAAACAACAA
ATGTATATTACTGCAGGAGTTCGAGTGCAAGACCCCCACAGCCATCGTGT
CTGGACGGACGCGGAATCGACGCTTGTTCGTCAGGGGATGAAGGATGGCG
TCCAGTTAAAGGTAGCGCTAGAGGGCGAGCAGGCGGGTCGATTTCTGCTG
GACGTGACCAGTTGCGTCAACAGCGCCTCCTCGGGCGGGGAAAGCGGCCG
ACAGTGTCGCCGTGAAGACGGGGTGCGTGTGTTCGTTGAGATGTAGCACC
TACACGTTTGGCACACGCTACAGTAGTAGTAACACGGTACAGTACAGTAG
TAGTAGTATACCATGATACGGTGTTACAGAATCCAAAGCTGTTAAATTGT
TATTTTTAATGTACAAATACATCAAATCAGCCGTGGTACGTTCCAAGCTG
GTTTTGGAGCCATATCGTCAACTTTACTGTGTGATGCTTCGGTCGCGCGA
ATGCTGTCGGTCCTCAGATATGGCATAGCGCAGTGACTCCCTTGGGTTGT
CCCAGGCTCTAGAGATAACTTATTGTTTCCACGGTTGTGTTGTTATTGCG
GGTGTGTTTTTCCACGAGTGATGTAGAAATAGGAAATAGGGGTTGATTTT
GTATTGTGCCGCTTTTGGTTGGCGAGGCTTCGAGTGTCGTCATCATATGA
TAGATATGTGTTACCGCGATATCGACAGAGGTAGGGCTGCTTGGCTGTTT
ACTGTTTACTACTATAATATATTACTCGTACTGTTTTCCGCTTTTAGTCG
AAATCTATGGTTGACACCGTTGTTTTCGTTGGTTGTTCATTTGGGTGCAC
AGCCGCGACCCAACCGGTATCTAACCCTGAACGGCACACCGTGTATTTGA
TAGGTGAGGTTGGCGGAGCCAAAAATGGCGCCTTCGGTGCGAGAAATCCA
GTGAAAAGGGTTTCTGATGTCTGTCAAAACAGCGTCAGATAACGGTCGAT
ATGGTTACATTTGGCCAATATTTGAAGTGGCGAATGCGTGAAGCACGTCT
CAGCGGGTTCAACGATCGTTGGGCAATTGGTAAAACTGCCCAATTACGTG
AGACGGCGTTCAACATAGTGAACTATGGTCAATAAGTGACTCGGGGAATG
CGTGAAGTATGTCTCAGCGGGTCCAATGATCGTTGAGGAATTGGTAAAAC
TGCCCAATATCGTCAGATAACGGTCAATATAGTTAATTTTGGTTGATACT
TGAAGCGGGGAATTTTTGCGCTTGTATCGAGACAATACGGGAATGTCACG
TTTGGAAAGTTCCTGTAATTCAATTATACGGCGCACACTGTGGATACAGT
TTGTATGGTCAACTGTAGTTTTTCGATAAGTCGGTAAAACAACGCTGTTG
ATACTTTATCGTGACCGCTATCCCGTTTCCTTCTTGTTCACGTAAAAACG
CCATTTTATTGAGCTATTGCCGAACGCTGCCTTTCTGTTTTTTTTTTTTC
ATTTTGGCTTTTCCTTTTGGGCCGCTGCCGTCCGTCGTTTGTCATATCCT
CCAGCTGATCCTCGATCTCAAAACTGGAACAGCAACGGGAGTGGTCACTA
TTTTACCGGCCGGTCGCTGTGCGCGACAGCGCCCATTAGGCGGAAAAGGA
GAGGGGGCAATCGAGCGCCTTGAGAAAACCCGTGCACGCGGGCTAGCACC
GTCGGCAAAGGAATTTCGGAGAGAAGAGACGGACGGGGGAAGCATCGGGG
AGGTTTCGCTCTTTATCGCGTTCTCGTCGGAGTGGATGTCGAGGTTTAAT
CGTCCGGTGCTCCCGTTAGGGTCTCTGCCCGCGCCCGTGTGTCCTCCTCC
GAGGAATGACAATGACAGTAGTGGTGGCCTTTCTTGGGGTTGTTGTCGTT
CGGCGGTGCCGCGGGAGAGGCCACCGCCGTTCCGAGCACGCGAAAGCGTG
CGTAGCGTTAGACGTCTGCACTTCGCCGTCAGCAACGAAAACAACAACGG
CATCAACATCAATAACAAAGGAAACAAAAACATGAATAACAACATCATCA
CCAATTACACGAGCAACAACAACAGCAACCACAACAGAGACAGAGGCAAC
AACGGTGGGCACGAAAATGCATCGGAACAGGTGCAATTTCGCGCGGAGCC
ACCGCTGCCACCACCACCACCACCACCACCACCGCCCGTAATCGAACTTA
GCGCGGTGGAATCCGTCTCCATGGGAGGGTTCTTCGGAACGGTCTGGGAC
TGTTCCTTGGTGCTCTCGTCATTCCTCGCCTCTCTCGGCCCGTCGGCGGT
CAGAGGAAAGAGGGTGGTGGAACTGGGGGCCGGCTGTGGGGTGGTGTCGG
CGGTGTGCGCGTTTCTGGGCGCGTCGGAAGTCGTTGCCACCGATACGGCG
GACCTGCTGCCCCTGCTAACGCTGAACTTGCAACGGAGCTGCTCGGGCAA
TCGTAGAGTCAAGGCGAGAAAAAGAAACGCGCTCTCGCGCACGGCGATTT
GTATTTATCTGCGTGTGTACGGGGGACAGGAGACCACATCGGTGGGTATC
ACCACCGCTTGTATGTGTCAAATACACAGCAGTTTATGATACCTTGTGCC
AAGCTTTTATGTGTTGTATTTTGTTATTTTGAATGTAATTTGTCTTTGAA
TCTCCGCCGGATGGGCAAAAAAAGTTAAACGTCGCCTCACAAATTTCTTC
CATCCCCTGTTTTTTTTTTTTTACGTCATGGTCAGCCCTGTCCCCCCTAC
CGCCTCCACCCGCCCGATGTTTTTGTTTGTGTTTTCTTTCTTTCTTTTTA
TCATTATTAGGTGGAAGAGTACACCTGGGGGTCGCCCACCCAAGAGCACC
CCGCCCTGGCCGGCGGTGACTTCGACCTGATCCTCTGCTCCGATTTGCTC
TTCGACCCGGCGGAGTGGGGTGCCCTTCGAGAGTCTCTCTGTCAGCTGGG
CGGGGAGCGCTCGGTGGTGTATCTCGCGCATCGCACGCGAAACGTGCAGG
AGCTAGACTTTTTTGGACTGTTGTTAGAAGGGGAGCGGGCGTCTTGGCGT
CGGAAGCTGCTGCTGTTGGACGGGGGGCAGGGCGTTGAACGGGTTTCGGG
TTGCCTGGAAGGGATGTTGTGGAAACGGGAGTGTTTTCCTGATGTGGCGC
TGTATGAGCTTTCACCAATACGCCGGGCCGGAGGCCAAGGATAAAAACGG
AGCTATGATGGAGAGACAGATGGGTTGTTGGCGTTTTTTTGCTAAAAGGG
GGACAGAGCAGCGTGGGGAAATTGTAAAATAGTACTAGTATTTCTTGTTG
CGTTCGACGATGGCGGCGCAAAGTTAGTTGGATAGATGCCGTCCCGCGCT
CATGTACAATCGAGCGCAGACGCTTCTTTTTTAAGTCCTCTTCAATGTAC
AGCCAACCTGGTACTACAGTGAAAGTGAGTCCCGTTTCACTCACGGCTAC
TGTAGATGACGCCTCAACCAAAAATACTGCGGCTGGCTGATTTTGTTGCG
CCATGTTATGGGGAC
back to top

Coding sequence (CDS) from alignment at D-herbacea_F_contig110:677999..688863+

>mRNA_D-herbacea_F_contig110.917.1 ID=mRNA_D-herbacea_F_contig110.917.1|Name=mRNA_D-herbacea_F_contig110.917.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2856bp|location=Sequence derived from alignment at D-herbacea_F_contig110:677999..688863+ (Desmarestia herbacea DmunF female)
ATGAAGGATGGCGTCCAGTTAAAGGTAGCGCTAGAGGGCGAGCAGGCGGG
TCGATTTCTGCTGGACGTGACCAGTTGCGTCAACAGCGCCTCCTCGGGCG
GGGAAAGCGGCCGACAGTGTCGCCGTGAAGACGGGATGAAGGATGGCGTC
CAGTTAAAGGTAGCGCTAGAGGGCGAGCAGGCGGGTCGATTTCTGCTGGA
CGTGACCAGTTGCGTCAACAGCGCCTCCTCGGGCGGGGAAAGCGGCCGAC
AGTGTCGCCGTGAAGACGGGCTGATCCTCGATCTCAAAACTGGAACAGCA
ACGGGAGTGGTCACTATTTTACCGGCCGGTCGCTGTGCGCGACAGCGCCC
ATTAGGCGGAAAAGGAGAGGGGGCAATCGAGCGCCTTGAGAAAACCCGTG
CACGCGGGCTAGCACCGTCGGCAAAGGAATTTCGGAGAGAAGAGACGGAC
GGGGGAAGCATCGGGGAGGTTTCGCTCTTTATCGCGTTCTCGTCGGAGTG
GATGTCGAGGTTTAATCGTCCGGTGCTCCCGTTAGGGTCTCTGCCCGCGC
CCGTGTGTCCTCCTCCGAGGAATGACAATGACAGTAGTGGTGGCCTTTCT
TGGGGTTGTTGTCGTTCGGCGGTGCCGCGGGAGAGGCCACCGCCGTTCCG
AGCACGCGAAAGCGTGCGTAGCGTTAGACGTCTGCACTTCGCCGTCAGCA
ACGAAAACAACAACGGCATCAACATCAATAACAAAGGAAACAAAAACATG
AATAACAACATCATCACCAATTACACGAGCAACAACAACAGCAACCACAA
CAGAGACAGAGGCAACAACGGTGGGCACGAAAATGCATCGGAACAGGTGC
AATTTCGCGCGGAGCCACCGCTGCCACCACCACCACCACCACCACCACCG
CCCGTAATCGAACTTAGCGCGGTGGAATCCGTCTCCATGGGAGGGTTCTT
CGGAACGGTCTGGGACTGTTCCTTGGTGCTCTCGTCATTCCTCGCCTCTC
TCGGCCCGTCGGCGGTCAGAGGAAAGAGGGTGGTGGAACTGGGGGCCGGC
TGTGGGGTGGTGTCGGCGGTGTGCGCGTTTCTGGGCGCGTCGGAAGTCGT
TGCCACCGATACGGCGGACCTGCTGCCCCTGCTAACGCTGAACTTGCAAC
GGAGCTGCTCGGGCAATCGTAGAGTCAAGCTGATCCTCGATCTCAAAACT
GGAACAGCAACGGGAGTGGTCACTATTTTACCGGCCGGTCGCTGTGCGCG
ACAGCGCCCATTAGGCGGAAAAGGAGAGGGGGCAATCGAGCGCCTTGAGA
AAACCCGTGCACGCGGGCTAGCACCGTCGGCAAAGGAATTTCGGAGAGAA
GAGACGGACGGGGGAAGCATCGGGGAGGTTTCGCTCTTTATCGCGTTCTC
GTCGGAGTGGATGTCGAGGTTTAATCGTCCGGTGCTCCCGTTAGGGTCTC
TGCCCGCGCCCGTGTGTCCTCCTCCGAGGAATGACAATGACAGTAGTGGT
GGCCTTTCTTGGGGTTGTTGTCGTTCGGCGGTGCCGCGGGAGAGGCCACC
GCCGTTCCGAGCACGCGAAAGCGTGCGTAGCGTTAGACGTCTGCACTTCG
CCGTCAGCAACGAAAACAACAACGGCATCAACATCAATAACAAAGGAAAC
AAAAACATGAATAACAACATCATCACCAATTACACGAGCAACAACAACAG
CAACCACAACAGAGACAGAGGCAACAACGGTGGGCACGAAAATGCATCGG
AACAGGTGCAATTTCGCGCGGAGCCACCGCTGCCACCACCACCACCACCA
CCACCACCGCCCGTAATCGAACTTAGCGCGGTGGAATCCGTCTCCATGGG
AGGGTTCTTCGGAACGGTCTGGGACTGTTCCTTGGTGCTCTCGTCATTCC
TCGCCTCTCTCGGCCCGTCGGCGGTCAGAGGAAAGAGGGTGGTGGAACTG
GGGGCCGGCTGTGGGGTGGTGTCGGCGGTGTGCGCGTTTCTGGGCGCGTC
GGAAGTCGTTGCCACCGATACGGCGGACCTGCTGCCCCTGCTAACGCTGA
ACTTGCAACGGAGCTGCTCGGGCAATCGTAGAGTCAAGGTGGAAGAGTAC
ACCTGGGGGTCGCCCACCCAAGAGCACCCCGCCCTGGCCGGCGGTGACTT
CGACCTGATCCTCTGCTCCGATTTGCTCTTCGACCCGGCGGAGTGGGGTG
CCCTTCGAGAGTCTCTCTGTCAGCTGGGCGGGGAGCGCTCGGTGGTGTAT
CTCGCGCATCGCACGCGAAACGTGCAGGAGCTAGACTTTTTTGGACTGTT
GTTAGAAGGGGAGCGGGCGTCTTGGCGTCGGAAGCTGCTGCTGTTGGACG
GGGGGCAGGGCGTTGAACGGGTTTCGGGTTGCCTGGAAGGGATGTTGTGG
AAACGGGAGTGTTTTCCTGATGTGGCGCTGTATGAGCTTTCACCAATACG
CCGGGCCGGAGGCCAAGGATAAGTGGAAGAGTACACCTGGGGGTCGCCCA
CCCAAGAGCACCCCGCCCTGGCCGGCGGTGACTTCGACCTGATCCTCTGC
TCCGATTTGCTCTTCGACCCGGCGGAGTGGGGTGCCCTTCGAGAGTCTCT
CTGTCAGCTGGGCGGGGAGCGCTCGGTGGTGTATCTCGCGCATCGCACGC
GAAACGTGCAGGAGCTAGACTTTTTTGGACTGTTGTTAGAAGGGGAGCGG
GCGTCTTGGCGTCGGAAGCTGCTGCTGTTGGACGGGGGGCAGGGCGTTGA
ACGGGTTTCGGGTTGCCTGGAAGGGATGTTGTGGAAACGGGAGTGTTTTC
CTGATGTGGCGCTGTATGAGCTTTCACCAATACGCCGGGCCGGAGGCCAA
GGATAA
back to top