|
|
Homology
BLAST of mRNA_D-herbacea_F_contig110.911.1 vs. uniprot
Match: D8LTY1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTY1_ECTSI) HSP 1 Score: 516 bits (1328), Expect = 2.130e-178 Identity = 248/341 (72.73%), Postives = 285/341 (83.58%), Query Frame = 3
Query: 348 AAPDPDLHILEVTNDGSAINMEMLIHLKEIFHQQLPKMPKEYIVRLVFDRKHRSIVLTKKGVPIGGITYRAFLEQKFGEIAFCAVASNSQVQGHGSRLMNELKKVAVRTDITHFHTYADNYAIGYFQKHGFTKTLSMSRDRWVSYVKDYDGGTHMECYVHPTVPYMAQAEMFRKQREFLVRRIAEISTSTRVHPGLPAAAFEDGRIHPFDIPGVVEAGWTEEDLNAQNRRKSDRDALATTKELLTLWREVEKNDNAWPFREPVDLTEVADYGKVCPHPMDLSLIKEHLDDVEPKAYYDSKERLKADFDLMINNCKTYNAEDTDYWAAADALQKSIAEIFSR 1370
AA PD+ ILEVTN+G NMEMLIHLKEIFHQQLPKMPKEYIVRLVFDRKH SIVLTKKGVPIGGITYR F+EQKFGEIAFCAVASNSQVQG+GSRLMNELK VA+R D++HFHTYADNYAIGYF KHGFTK L+MSRDRW +YVKDYDGGTHMECYVHPTVPYM QAEMF Q +FL RIA+IS+S VHPGL AF H DIPGV EAGWT ++LNAQNRRK D DALA KELL +WRE+EK+D AW FREPVDLTEV DY + P+DLS+I+E+LD+++PK +Y +KE+L+ D DLMI NCK YN ++T++WAAA+ ++K IAEI+ R
Sbjct: 74 AAYGPDMRILEVTNNGDPSNMEMLIHLKEIFHQQLPKMPKEYIVRLVFDRKHHSIVLTKKGVPIGGITYRPFVEQKFGEIAFCAVASNSQVQGYGSRLMNELKMVAIREDLSHFHTYADNYAIGYFAKHGFTKNLTMSRDRWFNYVKDYDGGTHMECYVHPTVPYMKQAEMFEIQSQFLRERIADISSSKVVHPGLSEEAFHSLE-HHIDIPGVAEAGWTMDELNAQNRRKRDGDALAVNKELLAIWRELEKHDVAWVFREPVDLTEVTDYTSIIERPIDLSVIRENLDELDPKPFYLNKEQLREDLDLMIRNCKKYNGQETEFWAAAETMEKFIAEIYDR 413
BLAST of mRNA_D-herbacea_F_contig110.911.1 vs. uniprot
Match: A0A835ZI58_9STRA (Histone acetyltransferase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI58_9STRA) HSP 1 Score: 314 bits (805), Expect = 1.320e-100 Identity = 165/333 (49.55%), Postives = 219/333 (65.77%), Query Frame = 3
Query: 408 MEMLIHLKEIFHQQLPKMPKEYIVRLVFDRKHRSIVLTKKGVPIGGITYRAFLEQKFGEIAFCAVASNSQVQGHGSRLMNELKKVAVRTDITHFHTYADNYAIGYFQKHGFTKTLSMSRDRWVSYVKDYDGGTHMECYVHPTVPYMAQAEMFRKQREFLVRRIAEISTST--RVHPGLPAAAFEDGRIHPFDIPGVVEAGWTEEDLNAQNRRKSDRD-----------ALATTKELLTLWREVEKNDNAWPFREPVDLTEVADYGKVCPHPMDLSLIKEHLDDVEPKAYYDSKERLKADFDLMINNCKTYNAEDTDYWAAADALQKSIAEIFS 1367
MEMLI LK IF +QLPKMPKEYIVRLVFD +H+S+ L K VPIGGI YR F +Q+FGEIAFCAV +N QVQGHG+RLMN LK+ A+ +ITHF TYADN+AIGYF+K GFTK++SM R+RW Y+K YDGGT MECYVHP++PY M + Q E+++ R + + +PG + + + DIPG+ +AGWTEE L A +R K DR A+ ++LL LW +V ++ AWPF EPVD V DY +V P+DL +KE+++ Y S+ L+ D + M +NC+ YNAE +D+++AA L K I F+
Sbjct: 1 MEMLITLKNIFAKQLPKMPKEYIVRLVFDPRHKSLALCKGDVPIGGICYRPFYDQQFGEIAFCAVTANEQVQGHGTRLMNHLKQYALGENITHFLTYADNFAIGYFKKQGFTKSISMPRERWHGYIKHYDGGTLMECYVHPSIPYTRVPHMLQAQLEYVINRYRHKGEAAIFKAYPG-SQVPYSNVKDLLQDIPGLKDAGWTEE-LIAGDRSKGDRQRASKAQAAAAAAVLLKQDLLMLWNKVSASNWAWPFYEPVDTGIVTDYLEVIKEPIDLRTMKENIE----AGTYTSRAALQVDMEKMCHNCRVYNAEGSDWYSAAQNLSKVIKRAFN 327
BLAST of mRNA_D-herbacea_F_contig110.911.1 vs. uniprot
Match: W7TL82_9STRA (Histone acetyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TL82_9STRA) HSP 1 Score: 304 bits (778), Expect = 7.240e-94 Identity = 160/360 (44.44%), Postives = 222/360 (61.67%), Query Frame = 3
Query: 339 VATAAPDPDLHILEVTNDGSAINMEMLIHLKEIFHQQLPKMPKEYIVRLVFDRKHRSIVLTKKGVPIGGITYRAFLEQKFGEIAFCAVASNSQVQGHGSRLMNELKKVAVRTDITHFHTYADNYAIGYFQKHGFTKTLSMSRDRWVSYVKDYDGGTHMECYVHPTVPYMAQAEMFRKQREFLVRRIAEISTSTRVHPGLPA------AAFEDGRIHP-FDIPGVVEAGWTEEDLNAQNRRKSDRDALATTKELLTLWREVEKNDNAWPFREPVDLTEVADYGKVCPHPMDLSLIKEHLDDVEPKA-----YYDSKERLKADFDLMINNCKTYNAEDTDYWAAADALQKSIAEIFSR*LDR 1382
VA D+ V N+G+ N E L+ LK IF +QLPKMPKEYIVRLVFDR+HR++ L + + IGGI YR + Q+F EIAFCA+ + QV+G+G+RLMN LK+ A R + +F TYADNYAIGYF+K GF+KTL M R +W+ Y+KDYDG MECYVHPT+ Y+ ++ +QR ++ R+ S S ++PGL E GR+ ++PG+ EAGW + ++R +DR+ A L + REV + AWPF EPVD +EV DY V P+DLSLI+ + + + +A YY +KE L AD M NCK YN TDY+AA ++ + ++F + L +
Sbjct: 155 VAKPQASGDITFCLVENNGTPENSERLVALKNIFAKQLPKMPKEYIVRLVFDRRHRAVALCRGKLVIGGICYRPYPSQRFAEIAFCAIMATEQVKGYGTRLMNHLKEQAKREGLRYFLTYADNYAIGYFRKQGFSKTLGMPRAQWMGYIKDYDGAHLMECYVHPTINYLDVPDIIARQRAYIHSRLKVKSKSHVIYPGLACFKALKEGGKEGGRVRDVMEVPGIKEAGWNLRESGPVSQRDTDRERAALQLFLNGILREVYNHRAAWPFVEPVDTSEVPDYLDVVSDPIDLSLIERRIKEGQSEAGSGGGYYRNKEMLLADLMRMCRNCKKYNDPSTDYYAAGQEMEGFVRQLFKKALAK 514
BLAST of mRNA_D-herbacea_F_contig110.911.1 vs. uniprot
Match: K0RT38_THAOC (Histone acetyltransferase (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RT38_THAOC) HSP 1 Score: 299 bits (766), Expect = 3.250e-93 Identity = 165/349 (47.28%), Postives = 218/349 (62.46%), Query Frame = 3
Query: 381 VTNDGSAINMEMLIHLKEIFHQQLPKMPKEYIVRLVFDRKHRSIVL-----TKKGVP---IGGITYRAFLEQKFGEIAFCAVASNSQVQGHGSRLMNELKKVAVRTDITHFHTYADNYAIGYFQKHGFTKTLSMSRDRWVSYVKDYDGGTHMECYVHPTVPYMAQAEMFRKQREFLVRRIAEISTSTRV-HPGLPAAAFEDGRI--------HPFDIPGVVEAGWTEEDLNAQNRRKSDRDAL--ATTKELLTLWREVEKNDNAWPFREPVDLTEVADYGKVCPHPMDLSLIKEHLDDVEPKAYYDSKERLKADFDLMINNCKTYNAEDTDYWAAADALQKSIAEIFSR 1370
VTNDG+ NM L+ LK +F +QLPKMPKEYI RLVFDR+H+S+ + +K+ IGGI YRA+ E +FGEIAFCAV ++ QV+G+G++LMN LK AV I +F TYADNYAIGYF+K GFTK+L M + R+ Y+KDYDGGT MECY+HP++ Y+ E+ QREF+++RI +S S +V +P LPA F D + IPGV+EAGWT DL A RR D D A ELL + +V + AW FR+PVD EVADY V P+DL ++ + +Y SK+ L D M+ NCKTYN Y+ A +L+K + IF +
Sbjct: 92 VTNDGARANMIRLVGLKSLFSRQLPKMPKEYIARLVFDRRHKSLAILSADPSKRETDEEIIGGICYRAYPEMRFGEIAFCAVNASQQVKGYGTKLMNLLKMHAVGEGIEYFITYADNYAIGYFKKQGFTKSLQMHKSRYHGYIKDYDGGTVMECYIHPSIDYLRIPEVVAAQREFILQRIRHLSKSDKVKYPALPAG-FADRHVSGRNRDVARALAIPGVIEAGWTHRDLLASTRRAKDADQRKSALRAELLAIVSKVSEQQFAWCFRDPVDTDEVADYLDVISDPIDLKTMERRI---RRGDWYKSKQMLHVDMVRMVENCKTYNDRGNSYYDHAVSLEKFLPTIFPK 436
BLAST of mRNA_D-herbacea_F_contig110.911.1 vs. uniprot
Match: A0A485LR22_9STRA (Histone acetyltransferase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LR22_9STRA) HSP 1 Score: 301 bits (772), Expect = 2.060e-92 Identity = 167/368 (45.38%), Postives = 231/368 (62.77%), Query Frame = 3
Query: 309 GLEGDGESRVVAT----AAPDPDLHILE---VTNDGSAINMEMLIHLKEIFHQQLPKMPKEYIVRLVFDRKHRSIVLTK-KGVPIGGITYRAFLEQKFGEIAFCAVASNSQVQGHGSRLMNELKKVAVRTDITHFHTYADNYAIGYFQKHGFTKTLSMSRDRWVSYVKDYDGGTHMECYVHPTVPYMAQAEMFRKQREFLVRRIAEISTSTRVHPGLPAAAFEDGR-IHPFDIPGVVEAGWTEEDLNAQNRRKSDRDALATTKELLTLWREVEKNDNAWPFREPVDLTEVADYGKVCPHPMDLSLIKEHLDDVEPKAYYDSKERLKADFDLMINNCKTYNAEDTDYWAAADALQKSIAEIFSR*LDRP 1385
G E GE V+ + A + D +LE +TNDG+ M L+ LK IF +QLPKMPKEYIVRLVFDR H S+V+ K K +GGI YR FL FGEIAFCA+ ++ QV+G+G+RLMN LK+ ITHF TYADNYAIGYF+K GF+K +SM + W Y+KDYDGGT MEC +H + Y++ M ++QR+ L+ I + S + V+PGL +F D R ++ ++PGV EAGW + + +N R S RD+ ++L TLW+ + + +AWPF EPVD+ V DY P+DLS I++ +D+ + Y +K K D LM NC +YNA DT+Y+ AA L + I + + +D P
Sbjct: 213 GDEDSGEMNVIVSRDEMAKKEEDTGVLEFTVITNDGTPDRMVQLMTLKNIFSKQLPKMPKEYIVRLVFDRNHHSMVILKNKKTVVGGICYRPFLANHFGEIAFCAITASEQVKGYGTRLMNHLKEYVKTQGITHFLTYADNYAIGYFKKQGFSKVVSMVKSNWFGYIKDYDGGTLMECVIHQKINYLSITSMVQEQRKMLLEEIQKRSKANVVYPGL--TSFCDSRLVNIHNVPGVKEAGWNQTII--RNSRTS-RDSSTLKQQLQTLWKSLSNHRSAWPFHEPVDVNAVTDYLDYVKTPIDLSAIQKKVDENQ----YATKLAFKDDLILMCENCISYNAPDTNYYKAAKDLLEFIKKKVTNDVDAP 571
BLAST of mRNA_D-herbacea_F_contig110.911.1 vs. uniprot
Match: A0A2D4BFT5_PYTIN (Histone acetyltransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BFT5_PYTIN) HSP 1 Score: 290 bits (743), Expect = 4.950e-91 Identity = 155/326 (47.55%), Postives = 205/326 (62.88%), Query Frame = 3
Query: 381 VTNDGSAINMEMLIHLKEIFHQQLPKMPKEYIVRLVFDRKHRSIVLTKKGVP-IGGITYRAFLEQKFGEIAFCAVASNSQVQGHGSRLMNELKKVAVRTDITHFHTYADNYAIGYFQKHGFTKTLSMSRDRWVSYVKDYDGGTHMECYVHPTVPYMAQAEMFRKQREFLVRRIAEISTSTRVHPGLPAAAFEDGR-IHPFDIPGVVEAGWTEEDLNAQNRRKSDRDALATTKELLTLWREVEKNDNAWPFREPVDLTEVADYGKVCPHPMDLSLIKEHLDDVEPKAYYDSKERLKADFDLMINNCKTYNAEDTDYWAAADALQKSI 1352
++NDG +M L LK IF +QLPKMP+EYIVRLVFDR HRS+V+ K G IGGI YR F F EIAFCA+ + QV+G+G+RLMN LK+ + ITHF TYADNYAIGYF+K GF K +SM + W Y+KDYDGGT MEC +H + Y+ M + QR+ + +I E S + V+PGL F +GR + + +PGV EAGW+ + +N R RD + +L LW+ V + +AWPF EPVD T V DY P+DLSLI++ ++ YY +K KA+ D M NNC YN +T+Y+ AA LQ+ I
Sbjct: 22 ISNDGEPEHMVQLTTLKNIFARQLPKMPREYIVRLVFDRNHRSMVILKNGKHVIGGICYRPFEPNHFAEIAFCAINAADQVKGYGTRLMNHLKEYVKASGITHFLTYADNYAIGYFKKQGFAKVVSMPKSNWFGYIKDYDGGTLMECTIHHQINYLRITSMVQXQRKKIQEKIKERSKAHIVYPGL--TQFAEGRTMDIYMVPGVKEAGWSHAVI--RNSRVGTRDPGSLRTQLQQLWKAVSSHRSAWPFHEPVDTTIVVDYLDYIKEPVDLSLIQKRIE----SGYYLNKAAFKAELDTMCNNCTIYNTPETNYYKAAKDLQEFI 339
BLAST of mRNA_D-herbacea_F_contig110.911.1 vs. uniprot
Match: K3WUL4_GLOUD (Histone acetyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUL4_GLOUD) HSP 1 Score: 297 bits (760), Expect = 1.650e-90 Identity = 158/327 (48.32%), Postives = 206/327 (63.00%), Query Frame = 3
Query: 381 VTNDGSAINMEMLIHLKEIFHQQLPKMPKEYIVRLVFDRKHRSIVLTKKGVP-IGGITYRAFLEQKFGEIAFCAVASNSQVQGHGSRLMNELKKVAVRTDITHFHTYADNYAIGYFQKHGFTKTLSMSRDRWVSYVKDYDGGTHMECYVHPTVPYMAQAEMFRKQREFLVRRIAEISTSTRVHPGLPAAAFEDGRIHP-FDIPGVVEAGWTEEDLNAQNRRKSDRDALATTKELLTLWREVEKNDNAWPFREPVDLTEVADYGKVCPHPMDLSLIKEHLDDVEPKAYYDSKERLKADFDLMINNCKTYNAEDTDYWAAADALQKSIA 1355
+TNDG+ +M L LK IF +QLPKMPKEYIVRLVFDR H S+V+ K G IGGI YR FL F EIAFCA+ + QV+G+G+RLMN LK+ + ITHF TYADNYAIGYF+K GF K +SM + W Y+KDYDGGT MEC +H + Y+ M KQR+ + +I E S + +PGL F +GR+ + IPGV EAGW++ + +N R RD + +L+ +W+ V + +AWPF EPVD T V DY P+DLSLI + ++ Y SK L+AD D M NC YN DT+Y+ AA LQ+ I+
Sbjct: 262 ITNDGTPEHMVQLTTLKNIFAKQLPKMPKEYIVRLVFDRNHHSMVILKNGTHVIGGICYRPFLPNHFAEIAFCAINAADQVKGYGTRLMNHLKEYVKKIGITHFLTYADNYAIGYFKKQGFAKVVSMPKPNWFGYIKDYDGGTLMECTIHYQIDYLRITSMVHKQRKAIQDKIKERSRAHITYPGL--TKFAEGRLMDIYMIPGVKEAGWSQATI--RNSRIGTRDPGSLKTQLMQIWKAVSSHRSAWPFHEPVDTTIVVDYLDYIKDPVDLSLIAKRIE----SGQYISKAALRADLDRMCENCTVYNTPDTNYYKAAKDLQEFIS 580
BLAST of mRNA_D-herbacea_F_contig110.911.1 vs. uniprot
Match: A0A7S2US18_9STRA (Histone acetyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US18_9STRA) HSP 1 Score: 290 bits (743), Expect = 1.680e-90 Identity = 152/340 (44.71%), Postives = 216/340 (63.53%), Query Frame = 3
Query: 390 DGSAINMEMLIHLKEIFHQQLPKMPKEYIVRLVFDRKHRSIVLTKKGVPIGGITYRAFLEQKFGEIAFCAVASNSQVQGHGSRLMNELKKVAVRTDITHFHTYADNYAIGYFQKHGFTKTLSMSRDRWVSYVKDYDGGTHMECYVHPTVPYMAQAEMFRKQREFLVRRIAEISTSTRVHPGLPAAAF----------EDGR--IHPFDIPGVVEAGWTEEDLNAQ---NRRKSDRDALATTKELLTLWREVEKNDNAWPFREPVDLTEVADYGKVCPHPMDLSLIKEHLDDVEPKAYYDSKERLKADFDLMINNCKTYNAEDTDYWAAADALQKSIAEIF 1364
D + +EMLI LK IF +QLPKMPK+YIVRLVFD +H+S+ L K G+P+GG+ YR++ Q+F EIAFCA+ + QV+G+G+ LMN LK+ + I F TYADNYAIGYF+K GF+ L M R++WV Y+K+YDGGT MECYVHP + ++ M R+QR+ ++ R+ IS + PGLP + F E GR + + G+ EAGW + L A +R + D++ LL +WR+V+ + ++W FREPVD+ +V+DY + HP+DL +KE LD +Y S+ +LKAD DLM++N YN +T Y+ AA L+ I F
Sbjct: 48 DATDEELEMLIILKNIFAKQLPKMPKDYIVRLVFDPRHQSMALVKGGIPVGGVCYRSYPTQQFAEIAFCAITATEQVKGYGTLLMNHLKEHVKQEGIRFFLTYADNYAIGYFKKQGFSTVLEMPREQWVGYIKEYDGGTLMECYVHPNMDFVDSTGMLRRQRQVILDRVRTISKAHIGRPGLPESLFKTISSDSKSGEAGREIVDLARVLGLAEAGWDLDKLTADLQASRAERDKNLQQA---LLAIWRKVKDHKSSWCFREPVDVEKVSDYLSIIKHPIDLRTMKERLDS---GTHYRSRGQLKADMDLMVDNAMQYNDANTTYYKAASELKPYIKVQF 381
BLAST of mRNA_D-herbacea_F_contig110.911.1 vs. uniprot
Match: A0A0P1B8E3_PLAHL (Histone acetyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B8E3_PLAHL) HSP 1 Score: 291 bits (746), Expect = 3.060e-90 Identity = 158/326 (48.47%), Postives = 207/326 (63.50%), Query Frame = 3
Query: 381 VTNDGSAINMEMLIHLKEIFHQQLPKMPKEYIVRLVFDRKHRSIVLTKKGVP-IGGITYRAFLEQKFGEIAFCAVASNSQVQGHGSRLMNELKKVAVRTDITHFHTYADNYAIGYFQKHGFTKTLSMSRDRWVSYVKDYDGGTHMECYVHPTVPYMAQAEMFRKQREFLVRRIAEISTSTRVHPGLPAAAFEDGRIHP-FDIPGVVEAGWTEEDLNAQNRRKSDRDALATTKELLTLWREVEKNDNAWPFREPVDLTEVADYGKVCPHPMDLSLIKEHLDDVEPKAYYDSKERLKADFDLMINNCKTYNAEDTDYWAAADALQKSI 1352
+TNDG+ +M L LK IF +QLPKMPKEYIVRLVFD+ HRS++L K G IGGI YR F F EIAFCA+ ++ QV+G+G+RLMN LK+ +IT+F TYADNYAIGYF+K GFTK +SM R W Y+KDYDGGT MEC +H + Y+ M +QR+ + +I E S + V+PGL F DGR+ + +PGV EAGW++ + +N R RD + +LL L + V + +AWPF EPVD + V DY P+DL LI + +D Y SK LKAD D M +NC YN DT+Y+ AA L++ I
Sbjct: 113 ITNDGTDEHMIQLTTLKNIFAKQLPKMPKEYIVRLVFDKNHRSMLLLKNGKHVIGGICYRPFESNHFAEIAFCAINASDQVKGYGTRLMNHLKEYVKIKNITYFLTYADNYAIGYFKKQGFTKNVSMDRPNWYGYIKDYDGGTLMECTIHTQINYLRITSMIHQQRKAIQDKIRERSRAKTVYPGL--TMFADGRLMDIYMVPGVKEAGWSQATI--RNSRIGTRDQGSLKSQLLQLLKAVSNHRSAWPFHEPVDTSVVVDYLDHVKDPVDLQLISKRID----SGAYISKAALKADLDKMCDNCTLYNTPDTNYYKAAADLREFI 430
BLAST of mRNA_D-herbacea_F_contig110.911.1 vs. uniprot
Match: A0A6G0XR84_9STRA (Histone acetyltransferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XR84_9STRA) HSP 1 Score: 295 bits (756), Expect = 3.450e-90 Identity = 161/363 (44.35%), Postives = 227/363 (62.53%), Query Frame = 3
Query: 324 GESRVVAT----AAPDPDLHILE---VTNDGSAINMEMLIHLKEIFHQQLPKMPKEYIVRLVFDRKHRSIVLTK-KGVPIGGITYRAFLEQKFGEIAFCAVASNSQVQGHGSRLMNELKKVAVRTDITHFHTYADNYAIGYFQKHGFTKTLSMSRDRWVSYVKDYDGGTHMECYVHPTVPYMAQAEMFRKQREFLVRRIAEISTSTRVHPGLPAAAFEDGR-IHPFDIPGVVEAGWTEEDLNAQNRRKSDRDALATTKELLTLWREVEKNDNAWPFREPVDLTEVADYGKVCPHPMDLSLIKEHLDDVEPKAYYDSKERLKADFDLMINNCKTYNAEDTDYWAAADALQKSIAEIFSR*LDRP 1385
GE V+ + A + D +LE +TNDG+ M L+ LK IF +QLPKMPKEYIVRLVFDR H S+V+ K K +GGI YR FL FGEIAFCA+ ++ QV+G+G+RLMN LK+ ITHF TYADNYAIGYF+K GF+K +SM++ W Y+KDYDGGT MEC +H + Y+ M ++QR+ ++ I + S + V+PGL +F D R ++ +PGV EAGW + +N R S RD+ ++L LW+ + +AWPF EPVD++ V DY HP+DLS I++ ++D + Y +K K D LM NC +YN+ +T+Y+ AA L + + + + +D P
Sbjct: 207 GELNVIVSRDEMAKKEEDTGLLEFCVITNDGTPERMIQLMTLKNIFSKQLPKMPKEYIVRLVFDRNHHSMVILKNKKTVVGGICYRPFLPNHFGEIAFCAITASEQVKGYGTRLMNHLKEYVKTQGITHFLTYADNYAIGYFKKQGFSKVVSMTKSNWFGYIKDYDGGTLMECVIHQKINYLEITSMVQQQRQMILDAIKKRSKADIVYPGL--TSFCDSRLVNIHAVPGVKEAGWNQ--TLVRNSRTS-RDSSTLKQQLQILWKSFSNHRSAWPFHEPVDVSVVTDYLDFVKHPIDLSTIQKKIEDNQ----YPTKAAFKDDLILMCENCLSYNSSETNYYKAAKDLLEFVKKKVTSDVDGP 560
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 514.6 |
| Seed ortholog evalue | 4.5e-143 |
| Seed eggNOG ortholog | 2880.D8LTY1 |
| Preferred name | HAG1 |
| KEGG ko | ko:K06062 |
| KEGG Pathway | ko04330,ko04919,ko05166,ko05203,map04330,map04919,map05166,map05203 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0000123,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004402,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006325,GO:0006355,GO:0006464,GO:0006473,GO:0006475,GO:0006807,GO:0006996,GO:0007275,GO:0008080,GO:0008150,GO:0008152,GO:0009314,GO:0009416,GO:0009628,GO:0009653,GO:0009791,GO:0009889,GO:0009891,GO:0009893,GO:0009908,GO:0009987,GO:0010015,GO:0010321,GO:0010468,GO:0010484,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016407,GO:0016410,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019538,GO:0022414,GO:0022622,GO:0031248,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0034212,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043543,GO:0043966,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045893,GO:0045935,GO:0048364,GO:0048367,GO:0048518,GO:0048522,GO:0048580,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051239,GO:0051252,GO:0051254,GO:0051276,GO:0060255,GO:0061458,GO:0061733,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0090567,GO:0097159,GO:0099402,GO:1901363,GO:1901564,GO:1902493,GO:1902494,GO:1902680,GO:1903506,GO:1903508,GO:1905392,GO:1990234,GO:2000026,GO:2000112,GO:2001141 |
| EggNOG free text desc. | histone acetyltransferase activity |
| EggNOG OGs | COG5076@1,KOG1472@2759 |
| Ec32 ortholog description | GCN5-like GNAT family acetyltransferase |
| Ec32 ortholog | Ec-12_003920.1 |
| EC | 2.3.1.48 |
| COG Functional cat. | BK |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko03021,ko03036 |
| Exons | 6 |
| Model size | 1502 |
| Cds size | 1329 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622927517.0904822-UTR-D-herbacea_F_contig110:590445..590489 | 1622927517.0904822-UTR-D-herbacea_F_contig110:590445..590489 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig110 590446..590489 + |
| 1690790211.9633746-UTR-D-herbacea_F_contig110:590445..590489 | 1690790211.9633746-UTR-D-herbacea_F_contig110:590445..590489 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig110 590446..590489 + |
| 1622927517.1746814-UTR-D-herbacea_F_contig110:601518..601647 | 1622927517.1746814-UTR-D-herbacea_F_contig110:601518..601647 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig110 601519..601647 + |
| 1690790212.043027-UTR-D-herbacea_F_contig110:601518..601647 | 1690790212.043027-UTR-D-herbacea_F_contig110:601518..601647 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig110 601519..601647 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622927517.1008863-CDS-D-herbacea_F_contig110:590489..590876 | 1622927517.1008863-CDS-D-herbacea_F_contig110:590489..590876 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig110 590490..590876 + |
| 1690790211.9759839-CDS-D-herbacea_F_contig110:590489..590876 | 1690790211.9759839-CDS-D-herbacea_F_contig110:590489..590876 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig110 590490..590876 + |
| 1622927517.1101482-CDS-D-herbacea_F_contig110:595469..595655 | 1622927517.1101482-CDS-D-herbacea_F_contig110:595469..595655 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig110 595470..595655 + |
| 1690790211.987635-CDS-D-herbacea_F_contig110:595469..595655 | 1690790211.987635-CDS-D-herbacea_F_contig110:595469..595655 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig110 595470..595655 + |
| 1622927517.1202264-CDS-D-herbacea_F_contig110:597030..597185 | 1622927517.1202264-CDS-D-herbacea_F_contig110:597030..597185 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig110 597031..597185 + |
| 1690790211.9963505-CDS-D-herbacea_F_contig110:597030..597185 | 1690790211.9963505-CDS-D-herbacea_F_contig110:597030..597185 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig110 597031..597185 + |
| 1622927517.1364348-CDS-D-herbacea_F_contig110:599474..599686 | 1622927517.1364348-CDS-D-herbacea_F_contig110:599474..599686 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig110 599475..599686 + |
| 1690790212.004225-CDS-D-herbacea_F_contig110:599474..599686 | 1690790212.004225-CDS-D-herbacea_F_contig110:599474..599686 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig110 599475..599686 + |
| 1622927517.1526191-CDS-D-herbacea_F_contig110:599988..600189 | 1622927517.1526191-CDS-D-herbacea_F_contig110:599988..600189 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig110 599989..600189 + |
| 1690790212.012814-CDS-D-herbacea_F_contig110:599988..600189 | 1690790212.012814-CDS-D-herbacea_F_contig110:599988..600189 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig110 599989..600189 + |
| 1622927517.1631608-CDS-D-herbacea_F_contig110:601330..601518 | 1622927517.1631608-CDS-D-herbacea_F_contig110:601330..601518 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig110 601331..601518 + |
| 1690790212.0251417-CDS-D-herbacea_F_contig110:601330..601518 | 1690790212.0251417-CDS-D-herbacea_F_contig110:601330..601518 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig110 601331..601518 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig110.911.1 >prot_D-herbacea_F_contig110.911.1 ID=prot_D-herbacea_F_contig110.911.1|Name=mRNA_D-herbacea_F_contig110.911.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=443bp
MKVNDQSQASGSKRPCPIGPDTAAPEAKKPAATVVQGVQPGAVAGLGNLG GMVTGAGEINGGSTASASGMSGISSSGGGGGGGGSGAAGLEGDGESRVVA TAAPDPDLHILEVTNDGSAINMEMLIHLKEIFHQQLPKMPKEYIVRLVFD RKHRSIVLTKKGVPIGGITYRAFLEQKFGEIAFCAVASNSQVQGHGSRLM NELKKVAVRTDITHFHTYADNYAIGYFQKHGFTKTLSMSRDRWVSYVKDY DGGTHMECYVHPTVPYMAQAEMFRKQREFLVRRIAEISTSTRVHPGLPAA AFEDGRIHPFDIPGVVEAGWTEEDLNAQNRRKSDRDALATTKELLTLWRE VEKNDNAWPFREPVDLTEVADYGKVCPHPMDLSLIKEHLDDVEPKAYYDS KERLKADFDLMINNCKTYNAEDTDYWAAADALQKSIAEIFSR* back to topmRNA from alignment at D-herbacea_F_contig110:590446..601647+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-herbacea_F_contig110.911.1 ID=mRNA_D-herbacea_F_contig110.911.1|Name=mRNA_D-herbacea_F_contig110.911.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=11202bp|location=Sequence derived from alignment at D-herbacea_F_contig110:590446..601647+ (Desmarestia herbacea DmunF female) GCGGTTCGCACCACTCTGCACGGCCGAAAGCTTGGGGCTGAGCGATGAAG
GTCAACGATCAATCCCAAGCGTCAGGATCCAAGCGACCATGCCCCATCGG
TCCTGACACAGCTGCCCCCGAAGCGAAAAAACCGGCCGCTACTGTTGTGC
AGGGTGTACAACCGGGAGCAGTCGCCGGTTTAGGTAACCTCGGTGGGATG
GTGACGGGTGCAGGGGAGATCAATGGGGGCAGTACTGCTTCCGCTAGTGG
GATGAGTGGTATCAGCAGTAGTGGTGGTGGTGGTGGTGGTGGTGGTAGTG
GTGCGGCCGGATTAGAGGGTGATGGCGAGTCTCGAGTGGTTGCGACTGCG
GCACCTGACCCGGACCTGCACATCCTAGAGGTTACGAACGATGGCAGCGC
AATCAACATGGAGATGTTGATTCACCTCAAGGTATGATTTGGTGCACCGC
CTGCTTCTGTACACGGAGAGTAACCAGGGCAACGTATCGTTGTTGGGATG
TTTCGGCTGTTGGTGCTAACCAGTGGGGCACAAGCTCTCTATGGTGACCA
CAGAATGATAGTATGTCTATGATAGCAAACAAACAAATTGATTTGTTGCG
TTCGAAACACTTACTTACTGAACAGCAGCAACATCAGCAGTATTATACTT
CGAAGTACAAGGTACATGTTAAAGTAGATGTTTAAACGATTACCAGGTAT
GTTTTGCCGCAGAGCTCACCGTCCCGACGCACCAGAACGCAGCGTTGTCG
TGTCACTGGCCCACTGCACACTGTTTGTAGTACAATTACAATGATCGATA
TCTCTGTATGTTGCACGATCTGCATTTAATTTGCAATTGACTACAGTACT
ACGATGTACGATAGTGTTTTGGTGTTGTTTTTAGTACAATTAATTGCAAA
TCTGTCATGTGTTGTTGTTGTTGATTCATCACATTAGCTCATCGTCCAAG
ATCTAGCCCGTGGTCACAAAAGTGCTGAGCCCTATGTAGAAAGATCCGGA
AAACACAGAAAAAAAAAAAAAAAAAAAGCAAAAAGAAGGGGTACACAGGA
CCGAATAGGTACACCAACTCATACTGGGCGATGTGTAAACTGATCTACTA
ACACTACCGCAGGTATCCATTCGACTACGACACCCACAGTGTTCTCCCCC
GTTCCCACTACTAACGAACTCGTGCCTGCTGGCTACAGCAGTTGCTGTCT
GGAGTGCTGCCTGCACCGTATACACGAAGCACGGTGTGGTGGTAGTCCGG
AAATAAAAACAAGACAAAGGGGATACAACACAATTAAACTGTCGTCTGAA
GTGCTGTCAGAATGACGACCCGTGGGCAATGCAGTGAAAACAAAACGCCA
GCCAAAGCCTCCAAAGTAATCGACAATCACCAGGTCTTTCCCGAGCCATC
TATAGTAGGCACATAGTATCCACGTTACTGATATTGCAAGGGGGTCGTTC
CACAATAAAGGGTACAACGCAGGCAACAACTAACTAAGTAGGCCACGGAG
ATAACACAGGCATTTCTACCGCATCTCTCTACAAACCAGTAACAAAAGAA
ACAAGTACAAGTACCTCTCCGAAGAGGTCCACAGAAAAACGAAATTACTG
CGACAGCCATGATGCGCGCCGTCGCGGTGCCGATCTTGCCCGTGTGCTGC
TGCTGATGTCGCCCATGGCCACCCCATGCACCGTCAACCTCGACCCACTC
CATGGTAACCCCCAGCACCATCAATCTCGACCTGCTCCGGACACATGCTT
TGTTGTTGCTCCTTTCCAGCCGGTTCCTTTCTCAGCTACGTAGCGCCTCC
ATGCACTTGAGGTTCTGGTCTTATGAAAAAAAGTTCACGCTCAGGGTGAG
TTCAACCAGGCTCTTCCCCGTTCGTCGCCGCTCGTCTCCCTCCCACTTTG
GCGGCGAATCCGGCTTCTAGACGGTATAGCTCCCTCTCTGCATCCTAGAC
CGTGCCGTCTTTCAGCCTATGGTGTGCTGCTGTGTGATACGAGTCGTAGC
GGTTGACCAGCACTCTATGCTCTGCGATAGCCACACCAGCCAGCTCTCCT
CTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCT
CTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCGACA
TGCCTGAAGCTCATGGCCGGTCCCCGCGCTATACGATTGTTTTTGGTGGC
GCTCCTGTTGTTGGGTCTTGAGCTTGTGCAATAATATTTGTTTGTTTGGT
TGTCCTGCTAGAAGCGGGCTCTAAATTATAGACTAAATAATATACTGTCT
ATCTGATGTACAACTAACTAAGGGCCTGGCCTAACAAAATTGAAAAATTC
TGAGGGTCTGTCTTATCAAAATTTTAAGAATTCAGAATTTTGCAAAATTC
AAGAGACGCCTCTATATATGAAACTGACTAGACATATTTAAAACTCGATC
GACGCGGATATCTTGATATTTGGCGCTTTATTTTGTAAGCCGATTTTCGC
CCACACACCTTTTGCTATTTAAAACTGAAAAAGCGCTTATTTGTCCATAT
GCATGTCGTATTTAAAACTCGATTAACCAACAAAAGGCACGAGCATCGCC
GCTACTTGCTACAACAACTTACTATTACTGTACCACTATCACACTGACTG
TTGTACTACAGTAGTAGTAGTACTACAATTCGGTAGCTACAACAGTAGTA
GTTGTACTGTTTTATGTATGGTGATACGACATGATGACACAACACAATAA
TAGTGGTACGAGTAACGAGTACGTCGTAGCACAGCCAAAGCACGCAAACC
AACCCATGACACAGCAAAGCACAACACAGCACAGCAAAATACAACCCAGC
ATAAACAAGGCAACGCAACAGAACTCAACTCAACTTAAGCGTAACGTGCC
TTTCCCACATGATGTGGAGTACGAGCGTACGAGCGTGTTGAAAAAAAATG
ATTTAGTTTGGTATACAGCAGTGTCCATCTATCTGACGAAAACCAAAGAG
ATACGGGAATGGGGCTGCTGCTGCCAAGAGAGGCACGGCACACACGTGGC
GTGGCCAACAGCAGCTTTGCTACCTGGCACAACAGGGGTGCAGTCCTGTC
CTATATGCTGTGTGTCTGTGCTGTCCTCTCTCTGTTGTGCTGGCGTGTGA
GTTGCGGGAGTTTTTTGCATCCAGCAACCAATTTTGGATCTCATCTGAAA
CAAGAACACAAATATACGCTTGGTGGGAATTCCCACCAAGCGTATATTCG
CGAAAATATCGACATATTCGTGTTTGCGTTTAAAACTCGATATGCACTTA
ATTTGGCTCTAAAAGGCCAATAAGCGCTTATTTTTGAGTTTTAAATATGT
CTAATGATTGGCCGGCCCTTCTGCGTAGTTGTTATGAGCAAGAAATTCCT
GAATTCTGAAGGTTGAAGAAAAGAAGTAGCGCAGCACTTAATTTGTTCAG
GATTCACAATTCAGCAAATAAACGCCTCGACTGTTGGAACTCGCTCAGGA
GCTGCAACATAGCACAGTACTGAACAAGGTGCTGCGAAGCCCGTAGCGCC
ACACCCGAGGCCGCAGTACAAGGCACACTACACAGGAGGATCACAAACAT
AACGAAGAGGTGTCATGCGTCCCAGTTGACCCACACAGAAGCTGCAATAT
AGCACAACAGTACTGCGAGCTCGCGCCAAGAGCAAAAACATGTTGTGATT
TTCGCGGATCGCCGAACTGGCAAAGCAGGCCGGCGGTATCGAGCTGTGTA
ATAAGTACGCGAACCAACTAGAGGCCTGCTGCGTCCTTTGTGGGCGTGTT
GTCGTCGTGTACGTGTTGCGGTGGTGCAATTGTTTTTTTTGTGCGATTGG
CGTTGTTTGCTTGTAAGTTCAAAGGTCGAGAAAGTTGATAGGACACAAAC
GGTAATTTTCAGCAAAAAATTCAGAATTTTACAAAATTCTGAATTCTTAA
TATTTGGATAAGACAGACCCTGAGGATCTGTCTTGACAAAATTTTAGATT
TCAGAATTTTGCAAAAATTCAGTAGACGCCTCCATATGAAACTCTATCAT
TGGCCAGCCCTTCTGCGTCGTTTATCAAGAGCAAGAAATTCCTGAATTCT
GAAGGTTGAAGAAAAGAAGTAGCGCAGCACTTGATTTGTTCAGGATTCAC
AATTCAGCAAATAAACGCCTCGACTGTTGGAACTCGCCCAGGAGCTGCAT
AGCACAGTACTAAACAAGGTGCTGCGAAGCCCGTAGCGCCGCACTCGAGG
TCGCAGTACAAGGCAGACGACACAACAGGATCACAAAGATAACGAAGAGG
TGTCATGCGTCCCAGTTGATCCACACAGAAGCTGCAATATAGCACAACAG
TACTGCGAGCTCGCGCCAAGAGCAAAAACATGTTGTGATTTTCGCGGATT
GCCGAATTGGCAAAGCAGGCCGGCAGTATCGAGTAGTTGTGTAATAAGCA
CGCGAACCAACTAGAGGCCTGCTGCGTCCTTTGTGGGCGTGTTGTCGTCG
TCTACGTGTTGCGGTGGTGCAATTGGGTTTCTTGTGCGATAGGCATTGTT
TGCTTGTAAGTTCAAAGGTCGAGAAATTTGTTAAGACGCAAACGGTAATT
TTCAGCAAAAAAAAATCTGAATTTTTCAAAATTCTGAATTCTTAATATTT
TGACAAAACAGACCCTAATTCAAGACATTAACTAATTTTTAATTTTCACT
TTCGTAGGAGACAATATGACAAACAACAACAAAACCAACAACAACAACAA
GTATGCAGCAGAGACATGGTACAGTTCAGTACAACAGTAGTAGCACGACA
GCAGCAGACAGCGAGAAGAAAAACAACACCGATACGAGTACACCAGACGG
ATTTTGACGTTTCTAATTTATTTTCTTGGATACTATCATCATACTGTACT
ATTGTGTTATATGATATCACCAGCTTCTTATGTTTGTCTTTTTTTTTTTT
TTTTTTTTGTATCATGTTTTCTAATGTCTTGCGTATTTTTTCTCTCTCCC
GATATCCTGTCGTTAAATTGTCAGGAAATCTTCCACCAGCAGCTGCCGAA
GATGCCGAAGGAGTACATAGTCCGTCTCGTGTTCGACCGCAAGCACCGGT
CGATCGTGTTGACGAAGAAGGGGGTTCCCATTGGCGGCATTACGTACCGC
GCCTTCCTCGAGCAGAAGTTCGGCGAGATTGCTTTCTGCGCCGTCGCGAG
CAATTCGCAGGTATGTTAACATTTTACAAATTCCGGAGTGTGATATTCAC
ATAAACAACAGTATGTTAGATAGTATCGATGGTACAGTAGTAATCGTTAA
GAGTACTCGAACAAAGGCCAACGCTCTCTCTATATAGAGTACACCAACAA
ACGTCATCGCTCTGTATACAGCAGAGTTCTCCAACCAAGGTAAAAACACT
CTGCCCGATAACCGCGTCTGTACAGTGTAGTGATTTGTCGTGTTGGTAGT
GGTACACGGGGGGGGGGGGGGGGGCTCATTTCATGCTTGGCCGTAGTCAT
ATGACCATAGATCCTCGCATCCCTACAATGCCGAGACGGAGCACGTCGGG
TTTTCACCGACCAGGCAGACATCGCGTGCACCAAGCGCGAAGCGTCGTGA
GGTGTTCGGCGATTCGCATGAAGTGTGAGCTGCATCCTACTAAGAACCAC
TTGTGAGGTGGACTTTGTTGCATATGGATGACAGCTTCGAATGAACAGTT
TGTTTTCTGGTGTGGCCACTTCCAGAGACAGCCATGGGTATACTATGTAA
CTGCCTCGTGGGTGCCTTACCATATATACACTACGTGATACCATCCCACT
TGCGCAGAGTTCAGGTTCTCCACCCCGCACAATATGATCTAACTCGACAA
CCAGCCATAGGGTAACCGCCAAAAAGCAAAGAAAAAAAAACGGCACCGTG
GTTGTCTAGCTCACATAGCGAGTGGCGTGTTTTACAGCGTCGTTGCCAAC
CGACGCCAACCCGGGGGGGGGCTAGCGTTGGTGTTAGTGTTCAGTGTTGC
AGTGTTAGCGTTCGTTCGCTTGTGTTAAAAAAAGAGAGAGTTTTCCTGTG
AAGTAGGGGTGGCGTTCATCGTATGTATCTCCTGCAGGCAGGCAGGCAGG
CAGGCAGGCAGGCAGGCAGGTGTGTGTGTGTGTGTGTTTCGTGGGGTTGG
CGCGTGCGATGGACGCGAAAGCGTTTTCGTTTAAGTTGTTGCCAGTTTTA
GCCTCGATGGTCGCTGTGTTGGCGTATTTTTTTCTTGTTGTCTCTCCTTG
TTTATGCGGAGCTTCATTATCATACCTGGTGTGTACTATTAGTACGGTGA
TCATACGTAGCGTTTTTGTTGTTGTCAACCATGACGCGTGTATTTTTTAT
CATTATATTTTTGTTATCTTACAATGTGCAGCGTAAAATTTAGCATCGAT
CACACTCATAAAACGTTTACAGAAAAAAGAACAAGAAAACTAACTCGAGG
GAAACCAAATTCGAGGGAAACCAAATAAGGAAACCTATGCATAAACCAAA
CCCCTTTGTACTTTTGTACCTATCTTTACGTGTATTGTATTTTGCGCTTG
CTTGCTGTGTGTATCGTGTCGTGTGCCGTGAAAAGGTGCAAGGGCACGGC
AGCCGTCTGATGAATGAGCTTAAGAAGGTGGCCGTGAGGACGGACATAAC
GCACTTCCACACGTACGCCGACAACTACGCCATCGGCTACTTCCAAAAAC
ACGGCTTCACCAAGACGCTCTCCATGTCGCGTGATCGCTGGTGAGGAGGC
GAAGAATGCCTAAGGGGCGGGGGGGGGTCCTCGTGTTTTGTGTGTGCCTT
GTCCGTAAAGAGCCGTTTTGATCATGCGTCCCCCGTTTAGACGGGGTCAA
CCGTTGTACCCGTATGAGCGGTTTGGTCCGTGTCGTGGTCGTTGGCCATC
GGCGTTGCCCCGGGGGAGGAGGAAGGAGGGGGGGGAGGCGTACTAATGTT
TCGATTGTCGTTTTTGCTACGTTTTTCATTATTTCTCGTTGTTCCCCGGT
AGGTAACGGCCTTTTTTTTCCCGGCAAATAAATATTTGGGAAAGTATCTC
TCGGTGTTTTTTTTTTTGCATTTTTGCATTTTTGCATTTTGGTGTCTCCA
CCGTGCCGGTCAACGTCGGACGCCTAAAAACAAAAATACGAAAAATTTGC
AAACGTGAAAGCAATACGATAAAAAAAAAACACCCCGATAAAAACACACA
AAAACGAGTGTATGTCGTTAATATATAACTATGCTACAGCACCACACATG
TTGCTCACAACACAACAGCGAAACACCAAGCGTATTGTTACAGTCCTGTT
ACAGATTTCTGGTATTTTTTTAAGCCACGAGTGTTTTGTGCTCCCGTCGA
CACAAGCTCAAACAAAGAAAAGAAAAGGGATTATATAACGTTTTATGCGT
ACGTTTTGGCACAGGAGCTAAGCGGGGAAGGGTAGGCTTCGTTTGGTATC
TGTGTCTGTCTACCTGCCCATCGTTTTGTTTTGTGTCAATTGCTTCTCTT
GCTATTTGTTGGGGGAAGCATGCTACACAGTACGAGTATGCAAATATGAC
ACAATTGGTACTTCGAAGCGCACTTGTAAGGGTTAGGGCCTGTCCAAACG
GGACAAAAAAAAAAATGGAATGAAAAAACGAAATGAAAATGTCATTTCGT
TTTTTTTCCGAGAAACAAAGACATTTTGTGTCCAAACGAACACACGACAC
ATAAAATCGAAAATGGCAGCAGTGACAACCACCCGAAAACAAGCAAACGA
CTACTACCGTCTGTATGTACCAGTTTGGGCGACGGCGCGTACGTGTGCTA
TTGACATCGCAGCTGAGTACACTCGAAGCGGACATGCGAGACATCCGTCG
GATTAGGTGGTGCTCGTGGTCCGGGTGTCACCCTTGAGAGTGCTCCTAAA
AAGTTTTGTTTTGATCGTCGCATGCAGCTATGATAGATGGTGGTTGTTCA
CAATTCGGTACTATACAGACTACGATCGCATACCACACATCGTGAAAAAC
ATTATCGCCACGCAGCCTGTCACGGCCGCCCCGGCAACACCAGCTTTGCC
GCGTGCGCTTTCTGATCATGCCATAGCCATGTGGTCACCTGGCGCCGCAG
GCAGGCAAGACTGCGGTAGCAGCATGTCCCATGGAACCTCAGAGCGAGGT
TTGCAAACCAAGAACGTTCGCAACATCACAGCTCATTCCCATTCCCGATA
AAAAAGAGGTCCCAGGACATTAAAATTATCGGGAATGGAAATGACTTCCA
TGCGAAATTAAAAGTCCGAATTGGTGGTCTACAGCCAATTACACCAATCA
AAGGCAAAGCCTCTTTCGATCTGATTTCGCTTTTTCATTTCGCTTTTTCA
TTTCGCTTTTTTTTTACCCGTTTGGACAGCCCCTTAGCTATGATTTTGAA
GAGTTTGGCGTATAGATTAGAGCCATTCAGATATTACACCATATTTTTTA
GTTACTGTAATAGTTGTGACACCCGAGGGAGACGATATATGTGCGTGGGT
GGACGAGGTATTTTGTCACCATATTTTGCGTTTGCATGCATGCGCGTTTT
TGTTGTCGTTGTTGTTGTTGTCTACGTGTCTTTTTTTTGTCGTCGTGTAT
TGTCTTGACATGGTTGTTGTCTTGATATAGATAGGCCCGTCTTTTCTACC
CCAGGACATCCATTCAGCGTACTCAAAGAATCTGTTCCGATATACTGATT
ATTCTACCCTATGATGTAAGAGAGACATGACATGATTTTTACGTGCGTCA
CGAGCTACTTGTTGTGTCGAAAGGGATGCGTGGTCAATGGTCAAATGGCG
TAAGGTAAACAACTAAGAAGTGCCCCCCCCCCCCCCTTCCGGCCCCCCCC
CCCCTATGGTCATACGACTGCGGCCATGCACGAAATGAGCACCGCCCCGC
CTCCCTACCACCGTCCATCCACATTTAGTCCAAAATACTCACAGGCATAT
GTGTAACGTGTGTGTGTGTGTAACGTGTGTGTGTGTGTGTGTGTGTGTGT
TTCTTTTTTTGTCGGGGTTACGCTGGAAGGGTGTCGTACGTGAAGGACTA
CGACGGCGGAACGCACATGGAGTGCTACGTACACCCCACCGTGCCGTACA
TGGCGCAGGCAGAAATGTTCAGGAAGCAGCGAGAGTTCTTGGTCAGGCGG
ATCGCGGAAATTTCCACCAGCACCCGCGTACACCCCGGGCTGCCCGCTGC
CGCTTTCGAAGACGGCCGCATTCACCCCTTCGATATTCCTGGTGAGTGAG
AGAACGGAGGCAATCAGGCATAAACACCCAGTTATCGATTATTGAGGCGT
TTTTGTGCATCCTGGGGAGGGGCGGTACGGGACGGAGGGCGGGCGGGGGG
GGCGGGGGAGCGGGTTACAATATCGAGTACTTGTGTTGAGACATACAGTT
GCCGTACTATGTAATAGTAGAACGGGTTTTAGCACTCCTCTGAGGATGCT
GTCCAGTTTTACTGTATACCCGGTACTGTAGTTCTGTTGTTTTTGTTTTA
TTGTTCTCCCCCCTCCCGTTTTTCCGGGGGTTACACCAAAAAGGCGTGGT
TGAGGCGGGTTGGACGGAGGAAGACCTGAACGCGCAGAACCGGCGGAAGA
GCGACCGCGACGCCCTGGCGACGACGAAGGAGCTGCTGACGCTGTGGAGA
GAGGTGGAGAAAAACGACAACGCCTGGCCGTTCCGCGAGCCCGTTGACTT
GACGGAGGTTGCGGACTACGGGAAAGTCTGTCCGCATCCGATGGGTAAGT
TTAAGTTTAGGATGATGTGTGTTTGTAACAAACGTATTGTCTTCGGTAAC
GTAGTACAATAGTGCTGCCATTGCTTGGGAGCGGGGGGTTTCAGCAAAAG
CTTTTTGGTGTTGTTGGGTCAACCATGTTGTCAACCATAGTTGGTGTCGA
ACTTTGTTGCTGTTGCTGTTGTCAACCGTTGTTGTTTTTGGGTTCGTGTG
TGGTTGTGTACATGTGTGACCGACTAAGCAACGCAAAACCGACGTACAGT
AGTTATCAGGACAGCGACGTTTTTGGTTTGTTTAGAGGCGCGATCACAGG
CAATCGTGTTCCCGTGAACAAGTTTGAAGTGTAAGGGTGTGGCTAGTAGG
GTACCTACTACAGGCATTCTTGCAATAGTCTACCCGAGACTGTAGTACGT
TTTTTAGTAGGTCTCTCAATACCCTACCCGAATATTTCGTACATTTAGCA
CCCGGGTACGGGTATATTATATTCAACACACCCTTGGGAGATTTCTACGG
TCTTCTTTGTGTGCTGTAATGTATGTATCGATAGTACTGTCTAAGCACAT
TAAATGCCCCGATCGTGGCCCGATTTATCCGAGAGGCCGTGGTCACGGGG
TACGAGGACGAAGGTTCGGCGATGCTGAACACCCAAACCGCGAACGAAAA
AGGAAGATATGCGCCCGCGAAATTTGGCAGTGTTGACACAGACCGATCGT
TGCCGTGATTATTTTATGGTTGATTGATGGTCCCCGTCCGTAACGTACTA
GCTAACGCCAAATGTTTGGTAACATCGATTGTTGCGCCCGGTGTAACGTT
TGCTCTCCCCCCTTTGCATTGTGCCTCGTGTTTTGTGGGGGTGATAAAAC
AACCATCACATCGACAACAACAAACAATAACAACAATAATGGTTGACAAC
AACAATTGTTGACAACGACATCAACCATGGTTGACAATGACCATGGTTGA
CAACATTTTTTTACGGCCGTGTAACGTTTTATTCCCCTCTTGCATTGTGA
CTGCCTCATGTTTATGGGGGCGACAAAACAACAACAACAACAACAACAAC
CACATTAACAATTGTTGACAATAACAACAATAATAACGACAATGGTTGAC
AACGACGATGACATCGACCATGATGACGTCGCAAGACTTGAGCTTGATCA
AGGAGCACCTCGACGACGTGGAGCCGAAGGCGTACTACGACAGCAAGGAG
CGCTTGAAGGCCGACTTCGACCTCATGATCAACAACTGCAAGACGTACAA
CGCCGAGGACACGGACTACTGGGCGGCCGCGGACGCGCTTCAGAAGTCGA
TCGCTGAGATATTCAGCCGCTGACTTGACCGACCTACCTTTCGGCATCCT
GCGTAGTAGAGAAATAAGTTTTGATCCTGGAAGCGATAATATCGCTTTTT
TTATCGTCTATGGTGTAGATTTCATGGCGATTTTATGGTTGTACAGGCGG
GG back to topCoding sequence (CDS) from alignment at D-herbacea_F_contig110:590446..601647+ >mRNA_D-herbacea_F_contig110.911.1 ID=mRNA_D-herbacea_F_contig110.911.1|Name=mRNA_D-herbacea_F_contig110.911.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2658bp|location=Sequence derived from alignment at D-herbacea_F_contig110:590446..601647+ (Desmarestia herbacea DmunF female) ATGAAGGTCAACGATCAATCCCAAGCGTCAGGATCCAAGCGACCATGCCC CATCGGTCCTGACACAGCTGCCCCCGAAGCGAAAAAACCGGCCGCTACTG TTGTGCAGGGTGTACAACCGGGAGCAGTCGCCGGTTTAGGTAACCTCGGT GGGATGGTGACGGGTGCAGGGGAGATCAATGGGGGCAGTACTGCTTCCGC TAGTGGGATGAGTGGTATCAGCAGTAGTGGTGGTGGTGGTGGTGGTGGTG GTAGTGGTGCGGCCGGATTAGAGGGTGATGGCGAGTCTCGAGTGGTTGCG ACTGCGGCACCTGACCCGGACCTGCACATCCTAGAGGTTACGAACGATGG CAGCGCAATCAACATGGAGATGTTGATTCACCTCAAGATGAAGGTCAACG ATCAATCCCAAGCGTCAGGATCCAAGCGACCATGCCCCATCGGTCCTGAC ACAGCTGCCCCCGAAGCGAAAAAACCGGCCGCTACTGTTGTGCAGGGTGT ACAACCGGGAGCAGTCGCCGGTTTAGGTAACCTCGGTGGGATGGTGACGG GTGCAGGGGAGATCAATGGGGGCAGTACTGCTTCCGCTAGTGGGATGAGT GGTATCAGCAGTAGTGGTGGTGGTGGTGGTGGTGGTGGTAGTGGTGCGGC CGGATTAGAGGGTGATGGCGAGTCTCGAGTGGTTGCGACTGCGGCACCTG ACCCGGACCTGCACATCCTAGAGGTTACGAACGATGGCAGCGCAATCAAC ATGGAGATGTTGATTCACCTCAAGGAAATCTTCCACCAGCAGCTGCCGAA GATGCCGAAGGAGTACATAGTCCGTCTCGTGTTCGACCGCAAGCACCGGT CGATCGTGTTGACGAAGAAGGGGGTTCCCATTGGCGGCATTACGTACCGC GCCTTCCTCGAGCAGAAGTTCGGCGAGATTGCTTTCTGCGCCGTCGCGAG CAATTCGCAGGAAATCTTCCACCAGCAGCTGCCGAAGATGCCGAAGGAGT ACATAGTCCGTCTCGTGTTCGACCGCAAGCACCGGTCGATCGTGTTGACG AAGAAGGGGGTTCCCATTGGCGGCATTACGTACCGCGCCTTCCTCGAGCA GAAGTTCGGCGAGATTGCTTTCTGCGCCGTCGCGAGCAATTCGCAGGTGC AAGGGCACGGCAGCCGTCTGATGAATGAGCTTAAGAAGGTGGCCGTGAGG ACGGACATAACGCACTTCCACACGTACGCCGACAACTACGCCATCGGCTA CTTCCAAAAACACGGCTTCACCAAGACGCTCTCCATGTCGCGTGATCGCT GGTGCAAGGGCACGGCAGCCGTCTGATGAATGAGCTTAAGAAGGTGGCCG TGAGGACGGACATAACGCACTTCCACACGTACGCCGACAACTACGCCATC GGCTACTTCCAAAAACACGGCTTCACCAAGACGCTCTCCATGTCGCGTGA TCGCTGGGTGTCGTACGTGAAGGACTACGACGGCGGAACGCACATGGAGT GCTACGTACACCCCACCGTGCCGTACATGGCGCAGGCAGAAATGTTCAGG AAGCAGCGAGAGTTCTTGGTCAGGCGGATCGCGGAAATTTCCACCAGCAC CCGCGTACACCCCGGGCTGCCCGCTGCCGCTTTCGAAGACGGCCGCATTC ACCCCTTCGATATTCCTGGGTGTCGTACGTGAAGGACTACGACGGCGGAA CGCACATGGAGTGCTACGTACACCCCACCGTGCCGTACATGGCGCAGGCA GAAATGTTCAGGAAGCAGCGAGAGTTCTTGGTCAGGCGGATCGCGGAAAT TTCCACCAGCACCCGCGTACACCCCGGGCTGCCCGCTGCCGCTTTCGAAG ACGGCCGCATTCACCCCTTCGATATTCCTGGCGTGGTTGAGGCGGGTTGG ACGGAGGAAGACCTGAACGCGCAGAACCGGCGGAAGAGCGACCGCGACGC CCTGGCGACGACGAAGGAGCTGCTGACGCTGTGGAGAGAGGTGGAGAAAA ACGACAACGCCTGGCCGTTCCGCGAGCCCGTTGACTTGACGGAGGTTGCG GACTACGGGAAAGTCTGTCCGCATCCGATGGGCGTGGTTGAGGCGGGTTG GACGGAGGAAGACCTGAACGCGCAGAACCGGCGGAAGAGCGACCGCGACG CCCTGGCGACGACGAAGGAGCTGCTGACGCTGTGGAGAGAGGTGGAGAAA AACGACAACGCCTGGCCGTTCCGCGAGCCCGTTGACTTGACGGAGGTTGC GGACTACGGGAAAGTCTGTCCGCATCCGATGGACTTGAGCTTGATCAAGG AGCACCTCGACGACGTGGAGCCGAAGGCGTACTACGACAGCAAGGAGCGC TTGAAGGCCGACTTCGACCTCATGATCAACAACTGCAAGACGTACAACGC CGAGGACACGGACTACTGGGCGGCCGCGGACGCGCTTCAGAAGTCGATCG CTGAGATATTCAGCCGCTGAACTTGAGCTTGATCAAGGAGCACCTCGACG ACGTGGAGCCGAAGGCGTACTACGACAGCAAGGAGCGCTTGAAGGCCGAC TTCGACCTCATGATCAACAACTGCAAGACGTACAACGCCGAGGACACGGA CTACTGGGCGGCCGCGGACGCGCTTCAGAAGTCGATCGCTGAGATATTCA GCCGCTGA back to top
|