mRNA_D-herbacea_F_contig110.909.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig110.909.1 vs. uniprot
Match: A0A6H5JX01_9PHAE (DUF155 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX01_9PHAE) HSP 1 Score: 457 bits (1177), Expect = 2.310e-155 Identity = 241/315 (76.51%), Postives = 269/315 (85.40%), Query Frame = 1
Query: 1 MDSLYIDVIHSTTDLRGGIRKARDLARHAWE-DVAEEGEGGGWGGYVDGSVEDDRXXXXXXXXXXXXXXXXXXXXXXXVVTHKDVIYFPYGAVVFWGCSAAEEEEMLASLQRFIVAKVSDTELAESFDDMTFVYKHRDVRKSVPLKNDEITLDTRDPAEKLAYSCALAQSAKLFVFEERLDNTIESTAKYPQMLAATGKIPLTEVQIGRLVGQVLCEQNEVNLHSDILDTPEYFWEEDAWEPAYEALCAYLDIPLRVDNLNKRLTILRELLDVLSTQSTNAHATRLEVIIIYLIFIEVAIELVWNVIVKDVFHLI 942
MDSLYIDVIHSTTDLRGG+RKAR+L R AWE D +GE G GY D+ XXXXX V HKD+++FPYGAVVFWGCS AEE+E+L++L RF++ KVS+TELA+SFDDMTFVY+HR ++ VPLKNDEITLDT+DPAEKLAYSC+LAQSAKLFVFEERLDN IE+TAKYPQ+LAATGKIPLTEVQIGRLVG+VLCEQNEVNLHSDILDTPEYFWEEDAWEPAYEALCAYLDIPLRVDNLNKRL+ILRELLDVLSTQSTNAHATRLEVII+YLIF+EVAIELVWNVI+KDV L+
Sbjct: 264 MDSLYIDVIHSTTDLRGGLRKARELERPAWETDEYADGEEGYGDGY-------DQEQEEVDGTGVGXXXXXEDGGDDAVTRHKDIMFFPYGAVVFWGCSEAEEKEVLSNLTRFMMGKVSETELAQSFDDMTFVYRHRGGKRGVPLKNDEITLDTQDPAEKLAYSCSLAQSAKLFVFEERLDNIIETTAKYPQVLAATGKIPLTEVQIGRLVGRVLCEQNEVNLHSDILDTPEYFWEEDAWEPAYEALCAYLDIPLRVDNLNKRLSILRELLDVLSTQSTNAHATRLEVIIVYLIFVEVAIELVWNVIIKDVLRLV 571
BLAST of mRNA_D-herbacea_F_contig110.909.1 vs. uniprot
Match: D8LTX9_ECTSI (DUF155 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTX9_ECTSI) HSP 1 Score: 264 bits (675), Expect = 3.720e-83 Identity = 154/208 (74.04%), Postives = 176/208 (84.62%), Query Frame = 1
Query: 1 MDSLYIDVIHSTTDLRGGIRKARDLARHAWE-DVAEEGEGGGWGGYVDGSVEDDRXXXXXXXXXXXXXXXXXXXXXXXVVTHKDVIYFPYGAVVFWGCSAAEEEEMLASLQRFIVAKVSDTELAESFDDMTFVYKHRDVRKSVPLKNDEITLDTRDPAEKLAYSCALAQSAKLFVFEERLDNTIESTAKYPQMLAATGKIPLTEVQIG 621
MDSLYIDVIHSTTDLRGG+RKAR+L R AWE D + +GE G Y DG + XXXXXXXXXXXXXXXX V HKD+++FPYGAVVFWGCS AEE+E+L++L RF+V KVS+TELA+SFDDMTFVY+HR ++ VPLKNDEITLDT+DPAEKLAYSC+LAQSAKLFVFEERLDN IE+TAKYPQ+LAATGKIPLTEVQIG
Sbjct: 112 MDSLYIDVIHSTTDLRGGLRKARELERPAWEADESADGEDG----YGDGYDQXXXXXXXXXXXXXXXXXXXEDEGDDAVTRHKDIMFFPYGAVVFWGCSEAEEKEVLSNLTRFMVGKVSETELAQSFDDMTFVYRHRGGKRGVPLKNDEITLDTQDPAEKLAYSCSLAQSAKLFVFEERLDNIIETTAKYPQVLAATGKIPLTEVQIG 315
BLAST of mRNA_D-herbacea_F_contig110.909.1 vs. uniprot
Match: A0A835ZB52_9STRA (DUF155 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB52_9STRA) HSP 1 Score: 262 bits (669), Expect = 1.740e-80 Identity = 148/314 (47.13%), Postives = 189/314 (60.19%), Query Frame = 1
Query: 4 DSLYIDVIHSTTDLRGGIRKARDLARHAWEDVAEEGEGGGWGGYVDGSVEDDRXXXXXXXXXXXXXXXXXXXXXXXVVTHKDVIYFPYGAVVFWGCSAAEEEEMLASLQRFIVAKVSDTELAESFDDMTFVYKHR-DVRKSVPLKNDEITLDTRDPAEKLAYSCALAQSAKLFVFEERLDNTIESTAKYPQMLAATGKIPLTEVQIGRLVGQVLCEQNEVNLHSDILDTPEYFWEEDAWEPAYEALCAYLDIPLRVDNLNKRLTILRELLDVLSTQSTNAHATRLEVIIIYLIFIEVAIELVWNVIVKDVFHLI 942
D LY DVIHSTTD A D A ++ AE D E DR KD+ PYG ++FWG + AEE ++L+ +++F V VS++EL +S DDMTF + D ++S +K DE+ L T EKL+YS ALAQSAKLFVFEERL N IE T YP+ L TGKI LT++Q+ +L+G+VL E+NEVNLHSD+LD PE+FWE WEP Y+ LC YLD+PLR+ +NKRL +LRELLDVL Q TN HA RLEV++ ELVWNV V+D+ HL+
Sbjct: 155 DVLYSDVIHSTTDKLLTEEPAEDYATKEGDENAE-----------DSQAETDRESKYARDREREHERSQHSLLAVPSHIGKDMFILPYGCIIFWGFTPAEELKLLSEIRKFAVGPVSESELEQSQDDMTFCFVDAGDDKESRVIKADELVLSTDSALEKLSYSFALAQSAKLFVFEERLGNIIEQTRVYPEELKLTGKIQLTQMQMNKLIGRVLVERNEVNLHSDVLDKPEFFWETQTWEPEYQRLCTYLDMPLRLVVINKRLDVLRELLDVLHNQVTNTHAIRLEVVV----------ELVWNVGVRDIMHLV 447
BLAST of mRNA_D-herbacea_F_contig110.909.1 vs. uniprot
Match: A0A4D9D3S6_9STRA (DUF155 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3S6_9STRA) HSP 1 Score: 231 bits (589), Expect = 2.360e-67 Identity = 123/232 (53.02%), Postives = 157/232 (67.67%), Query Frame = 1
Query: 244 KDVIYFPYGAVVFWGCSAAEEEEMLASLQRFIVAKVSDTELAESFDDMTFVYKHRDVRKSVPLKNDEITLDTRDPAEKLAYSCALAQSAKLFVFEERLDNTIESTAKYPQMLAATGKIPLTEVQIGRLVGQVLCEQNEVNLHSDILDTPEYFWEEDAWEPAYEALCAYLDIPLRVDNLNKRLTILRELLDVLSTQSTNAHATRLEVIIIYLIFIEVAIELVWNVIVKDVFHL 939
K + FPYG VFWGC+ EEE ++ L F V VSD E ES+DD + Y S + + EITL + DP EKLA S +LAQSAKLFVFE+R+D TI ST P LA GK ++ +I +L G+V E+NE+NLHSDILDTPE+FWE D WEP Y LC YLD+P RV+ LNKRL ILRELL+VL TQ N+H+T+LE+I+I LI +EV ++ V + + D+ HL
Sbjct: 339 KHIFCFPYGCTVFWGCTKEEEERFISMLTPFAVELVSDMEREESYDDFAYFYG-----SSPQILHYEITLTSNDPEEKLALSFSLAQSAKLFVFEDRVDGTITSTKHIPIHLAEFGKTNVSRKEISKLTGKVFLERNEINLHSDILDTPEWFWEADLWEPRYVGLCKYLDLPNRVNILNKRLDILRELLNVLETQLDNSHSTKLELIVIALIIVEVVLQ-VLEIALNDLLHL 564
BLAST of mRNA_D-herbacea_F_contig110.909.1 vs. uniprot
Match: A0A3F2RCQ5_9STRA (DUF155 domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A3F2RCQ5_9STRA) HSP 1 Score: 201 bits (511), Expect = 1.910e-59 Identity = 107/229 (46.72%), Postives = 153/229 (66.81%), Query Frame = 1
Query: 244 KDVIYFPYGAVVFWGCSAAEEEEMLASLQRFIVAKVSDTELAESFDDMTFVYKHRDVRKSVPLKNDEITLDTRDPAEKLAYSCALAQSAKLFVFEERLDNTIESTAKYPQMLAATGKIPLTEVQIGRLVGQVLCEQNEVNLHSDILDTPEYFWEEDAWEPAYEALCAYLDIPLRVDNLNKRLTILRELLDVLSTQSTNAHATRLEVIIIYLIFIEVAIELVWNVIVKDV 930
KD YF G VFWG + AEE+ L +L F V V E+ +DM ++Y + + ND ITL + +EKLA S A+AQS+KL VFEER+++TI T PQ LAATG I ++ I +L+G++ E+++VNL+SD+LD P++FWE+D +EP Y+ + YL + RV LN RL ILRELLDVLS Q + H T+LE+I+I+LI EVA+++VWN+++KD+
Sbjct: 16 KDAFYFATGCAVFWGLTRAEEQAHLMALGTFSVGPVKQVEV----EDMDYMYGDASI-----ICNDAITLSSNRASEKLAVSFAMAQSSKLDVFEERVEDTIRETKHVPQNLAATGSIQYSQSDISKLIGRLFIERSDVNLNSDMLDEPDFFWEDDEYEPLYKKVMKYLSVDNRVQILNTRLDILRELLDVLSQQLAHQHDTKLEMIVIWLIVAEVAVQVVWNILIKDI 235
BLAST of mRNA_D-herbacea_F_contig110.909.1 vs. uniprot
Match: A0A2D4BKL3_PYTIN (DUF155 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BKL3_PYTIN) HSP 1 Score: 206 bits (525), Expect = 7.280e-59 Identity = 114/229 (49.78%), Postives = 154/229 (67.25%), Query Frame = 1
Query: 244 KDVIYFPYGAVVFWGCSAAEEEEMLASLQRFIVAKVSDTELAESFDDMTFVYKHRDVRKSVPLKNDEITLDTRDPAEKLAYSCALAQSAKLFVFEERLDNTIESTAKYPQMLAATGKIPLTEVQIGRLVGQVLCEQNEVNLHSDILDTPEYFWEEDAWEPAYEALCAYLDIPLRVDNLNKRLTILRELLDVLSTQSTNAHATRLEVIIIYLIFIEVAIELVWNVIVKDV 930
KDV YF G VFWG + AEE+ L +L F V V E+ +DM + Y DV + V ND ITL + +EKLA S A+AQSAKL VFEER++ TI+ T PQ LA TG I ++ I +L+G++ E+N+VNL+SD+LD P++FWE+D +EP Y+ + YLD+ RV LN RL ILRELLDVLS Q + H T+LE I+I+LI EVA++LVWN+++KD+
Sbjct: 244 KDVFYFGTGCTVFWGLTRAEEQAHLRALAAFSVGPVKQVEV----EDMDYTYG--DVSRIV---NDAITLSSNRASEKLAISFAMAQSAKLDVFEERVEETIQKTKHIPQNLATTGSIQYSQSDISKLIGRLFIERNDVNLNSDMLDEPDFFWEDDEYEPLYKKMMKYLDVDNRVAILNTRLDILRELLDVLSQQLAHQHDTKLEWIVIWLIVAEVAVQLVWNILIKDI 463
BLAST of mRNA_D-herbacea_F_contig110.909.1 vs. uniprot
Match: A0A7S2S7I6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7I6_9STRA) HSP 1 Score: 202 bits (513), Expect = 7.680e-59 Identity = 110/233 (47.21%), Postives = 151/233 (64.81%), Query Frame = 1
Query: 241 HKDVIYFPYGAVVFWGCSAAEEEEMLASLQRFIVAKVS-DTELAESFDDMTFVYKHRDV-----RKSVP---LKNDEITLDTRDPAEKLAYSCALAQSAKLFVFEERLDNTIESTAKYPQMLAATGKIPLTEVQIGRLVGQVLCEQNEVNLHSDILDTPEYFWEEDAWEPAYEALCAYLDIPLRVDNLNKRLTILRELLDVLSTQSTNAHATRLEVIIIYLIFIEVAIELVWN 912
HKD+I+FP+G VVFWGC EE +L+ L +S + EL ES D M F Y + P + D++ L + P EKLA S ALAQSAKLFVFE RLD TI S + P+ LA +G + LT ++ R++G++ + +VNLHSDILD PE+ WE + WEP++ LC+YLDI RV+ LNKRL ++RELLDVL TQ + +++RLE I+I LI IE+ E++W+
Sbjct: 74 HKDIIFFPFGCVVFWGCDHEEELGVLSFLSSAFSESLSTEAELQESHDTMAFTYNSNSAGPGNFAATTPRTRVLGDKVHLVSWHPLEKLAVSFALAQSAKLFVFEARLDVTINSVKRIPEELAESGSVSLTRNELSRMMGKLFIARTQVNLHSDILDEPEFLWEYEDWEPSFHKLCSYLDIDHRVELLNKRLDLIRELLDVLDTQLESKNSSRLEWIVIILIIIEILFEVLWD 306
BLAST of mRNA_D-herbacea_F_contig110.909.1 vs. uniprot
Match: F0WJI1_9STRA (Uncharacterized protein AlNc14C122G6706 n=3 Tax=Albugo TaxID=65356 RepID=F0WJI1_9STRA) HSP 1 Score: 206 bits (524), Expect = 9.530e-59 Identity = 112/229 (48.91%), Postives = 153/229 (66.81%), Query Frame = 1
Query: 244 KDVIYFPYGAVVFWGCSAAEEEEMLASLQRFIVAKVSDTELAESFDDMTFVYKHRDVRKSVPLKNDEITLDTRDPAEKLAYSCALAQSAKLFVFEERLDNTIESTAKYPQMLAATGKIPLTEVQIGRLVGQVLCEQNEVNLHSDILDTPEYFWEEDAWEPAYEALCAYLDIPLRVDNLNKRLTILRELLDVLSTQSTNAHATRLEVIIIYLIFIEVAIELVWNVIVKDV 930
KDV YF G VFWG S AEE+E L +L F + V E+ +DM +VY S + ND ITL + +EKLA S A+AQSAKL VFEER++ TI+ T PQ LA TG I ++ I +L+G++ E+N+VNL+SD+LD P++FWE+D +EP Y+ + YLD+ RV LN RL ILRELLDVLS Q + H T+LE I+I+LI EV +++VWN+++KD+
Sbjct: 245 KDVFYFATGCTVFWGLSRAEEQEHLRALISFSMGPVKQVEV----EDMDYVYGD-----SNRIVNDAITLSSNCASEKLAISFAMAQSAKLDVFEERVEETIQKTKHIPQNLATTGSIHYSQNDISKLIGRLFIERNDVNLNSDMLDEPDFFWEDDEYEPLYKKMMKYLDVDNRVQILNTRLDILRELLDVLSQQLAHQHDTKLEWIVIWLIVAEVVVQIVWNILIKDI 464
BLAST of mRNA_D-herbacea_F_contig110.909.1 vs. uniprot
Match: A0A8K1CNT9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNT9_PYTOL) HSP 1 Score: 204 bits (520), Expect = 2.220e-58 Identity = 110/229 (48.03%), Postives = 153/229 (66.81%), Query Frame = 1
Query: 244 KDVIYFPYGAVVFWGCSAAEEEEMLASLQRFIVAKVSDTELAESFDDMTFVYKHRDVRKSVPLKNDEITLDTRDPAEKLAYSCALAQSAKLFVFEERLDNTIESTAKYPQMLAATGKIPLTEVQIGRLVGQVLCEQNEVNLHSDILDTPEYFWEEDAWEPAYEALCAYLDIPLRVDNLNKRLTILRELLDVLSTQSTNAHATRLEVIIIYLIFIEVAIELVWNVIVKDV 930
KDV YF G VFWG + AEE+ L +L F V V E+ +DM + Y +S + ND ITL++ +EKLA S A+AQSAKL VFEER++ TI+ T PQ LA TG I ++ I +L+G++ +N+VNL+SD+LD P++FWE+D +EP Y+ + YLD+ RV LN RL ILRELLDVLS Q + H T+LE I+I+LI EVA+++VWN+++KD+
Sbjct: 218 KDVFYFGTGCTVFWGLTRAEEQAHLRALMAFSVGPVKQVEV----EDMDYTYG-----ESSRIFNDAITLESNRASEKLAISFAMAQSAKLDVFEERVEETIQKTKHIPQNLATTGSIQYSQSDISKLIGRLFIVRNDVNLNSDMLDEPDFFWEDDEYEPLYKKMMKYLDVDNRVQILNTRLDILRELLDVLSQQLAHQHDTKLEWIVIWLIVAEVAVQIVWNILIKDI 437
BLAST of mRNA_D-herbacea_F_contig110.909.1 vs. uniprot
Match: A0A8K1CLV5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CLV5_PYTOL) HSP 1 Score: 202 bits (515), Expect = 5.450e-58 Identity = 109/229 (47.60%), Postives = 152/229 (66.38%), Query Frame = 1
Query: 244 KDVIYFPYGAVVFWGCSAAEEEEMLASLQRFIVAKVSDTELAESFDDMTFVYKHRDVRKSVPLKNDEITLDTRDPAEKLAYSCALAQSAKLFVFEERLDNTIESTAKYPQMLAATGKIPLTEVQIGRLVGQVLCEQNEVNLHSDILDTPEYFWEEDAWEPAYEALCAYLDIPLRVDNLNKRLTILRELLDVLSTQSTNAHATRLEVIIIYLIFIEVAIELVWNVIVKDV 930
KDV YF G VFWG + AEE+ L +L F V V E+ +DM + Y +S + ND ITL++ +EKLA S A+AQSAKL VFEER++ TI+ T PQ LA TG I ++ I +L+GQ+ +N+VNL+SD+LD PE+FWE+D ++P Y+ + YLD+ RV LN RL ILRELLDVL+ Q + H T+LE I+I+LI EV +++VWN+++KD+
Sbjct: 190 KDVFYFGTGCTVFWGLTRAEEQAHLRTLTTFSVGPVKQVEV----EDMDYTYG-----ESSHIFNDSITLESNRASEKLAISFAMAQSAKLDVFEERVEETIQKTKHIPQNLATTGSIQYSQSDISKLIGQLFIVRNDVNLNSDMLDEPEFFWEDDEYQPLYKKMTKYLDVDNRVQILNTRLDILRELLDVLNQQLAHRHGTKLEWIVIWLIVAEVLVDVVWNMLIKDI 409 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig110.909.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig110.909.1 >prot_D-herbacea_F_contig110.909.1 ID=prot_D-herbacea_F_contig110.909.1|Name=mRNA_D-herbacea_F_contig110.909.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=322bp MDSLYIDVIHSTTDLRGGIRKARDLARHAWEDVAEEGEGGGWGGYVDGSVback to top mRNA from alignment at D-herbacea_F_contig110:575602..582564+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig110.909.1 ID=mRNA_D-herbacea_F_contig110.909.1|Name=mRNA_D-herbacea_F_contig110.909.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=6963bp|location=Sequence derived from alignment at D-herbacea_F_contig110:575602..582564+ (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig110:575602..582564+ >mRNA_D-herbacea_F_contig110.909.1 ID=mRNA_D-herbacea_F_contig110.909.1|Name=mRNA_D-herbacea_F_contig110.909.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1932bp|location=Sequence derived from alignment at D-herbacea_F_contig110:575602..582564+ (Desmarestia herbacea DmunF female)back to top |