mRNA_D-herbacea_F_contig110.904.1 (mRNA) Desmarestia herbacea DmunF female
|
Overview
Homology
BLAST of mRNA_D-herbacea_F_contig110.904.1 vs. uniprot
Match: D8LTY8_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTY8_ECTSI) HSP 1 Score: 1196 bits (3095), Expect = 0.000e+0 Identity = 615/696 (88.36%), Postives = 648/696 (93.10%), Query Frame = 2
Query: 80 MSNDAVAVEAVVDAELGAVKELDEDVFAYILGIVLDVDSHGCDPETLAETVGQFLLSSGFVDTDEEAEEKCQALAKRLQKALGMEGASTQHKDEDDGHAPRLLDAPVKIQDQEGNDREGLDFMWGTDKVRDKFNQQMDWDKHLSKKDLRRAEREQLAFLKEIEKLTGTEADDGEEDISMMVLPDYSSGNNEKDIHVKNFNINVGGLELLDCADLKLAYGRKYGLIGRNGVGKTTLLRHMAAYDIEGFPRHHRVMHVRQEIKPSEKTVIQVVVDSDIERLQLIQQEKEILERQSRRAGAQDGG-----APVEGDDTAGVAADEAKLSEIYGRLGQIGAASAEARAAVILSGLGFSQDVQTYPKTLVLVSHDRQFLNEVSTDIVHFLSKKLHYYKGDYDTFVNVRTELAKNQRRAFEASSAKKQHMQEFIDKFRSNAKRASLVQSRIKALDKMEDVEDVEDEAKVTIKLPEPGPIGRPIVQIEGVTFGYDPTNPLFSNVHFGVDLESRIGIVGPNGAGKSTLLNLILDKLRPLRGEVRRNANLRIAHFTQHAAEQFDYRLNSVDNMIKLFPGAQDQEMRKFLGRFDISGPLALRPLKFLSGGQKSRVAFAKLAWSNPHVVIMDEPTNHLDLETIEGLIVALQAFKGGVMIVSHDQHFITQVCNELWVVGKGEVSKYPGDFEDYKKDQIAKRKASGPSL 2152
MS+ AVEAVV+ +LGAVKELDED+F YILGIV DVD+HGCDPETLAETVGQFLLSSGF DTDEE+EEKCQALAK LQ+ALGMEGAST HK+EDDGHAPRLLDAPVKIQDQEGND+EGLDFMWGTDKVRDKFNQQMDWDKHLSKKDLRRAEREQLAFLKEIE LTGTEADDGEEDISMMVLPDYSSGNNEKDIHVKNFNINVGGLELLDCADLKLAYGRKYGLIGRNGVGKTTLLRHMAAYDIEGFPRHHRVMHVRQEIKPSEKTVIQVVVDSD+ERL L++QEKEIL+RQ+RR P + D AGVAADEAKLS+IYGRLGQIGAASAEARAA ILSGLGFS +VQTYPKTL+LVSHDRQFLNEVSTDI+HFLSKKLHYYKGDYDTFVNVRTELAKNQRRA+EAS+AKK HMQEFIDKFRSNAKRASLVQSRIKAL+KMED DEAKVTI LPEPGPIGRPIVQIEGVTFGYD NPLFSNVHFGVDL+SR+GIVGPNGAGKSTLLNLILDKLRPL GEVRRN NLRIAHFTQHAAEQFDYRLNSVDNMIKLFPG Q+QEMRKFLGRFDISGPLALRPLKFLSGGQKSRVAFAKLAWS PHVVIMDEPTNHLDLETIE LI+ALQAFKGGVMIVSHDQHFI +VC+ELWVVG GEV+KYPG+F+DYK +QIAKRKA+G SL
Sbjct: 1 MSSSDAAVEAVVEKQLGAVKELDEDIFVYILGIVKDVDAHGCDPETLAETVGQFLLSSGFCDTDEESEEKCQALAKSLQQALGMEGASTTHKEEDDGHAPRLLDAPVKIQDQEGNDQEGLDFMWGTDKVRDKFNQQMDWDKHLSKKDLRRAEREQLAFLKEIELLTGTEADDGEEDISMMVLPDYSSGNNEKDIHVKNFNINVGGLELLDCADLKLAYGRKYGLIGRNGVGKTTLLRHMAAYDIEGFPRHHRVMHVRQEIKPSEKTVIQVVVDSDVERLMLMKQEKEILDRQARRXXXXXXXXXXXTTPSDDHDAAGVAADEAKLSDIYGRLGQIGAASAEARAATILSGLGFSTEVQTYPKTLLLVSHDRQFLNEVSTDIIHFLSKKLHYYKGDYDTFVNVRTELAKNQRRAYEASAAKKAHMQEFIDKFRSNAKRASLVQSRIKALEKMEDXXXXXDEAKVTIHLPEPGPIGRPIVQIEGVTFGYDAGNPLFSNVHFGVDLDSRVGIVGPNGAGKSTLLNLILDKLRPLSGEVRRNPNLRIAHFTQHAAEQFDYRLNSVDNMIKLFPGVQEQEMRKFLGRFDISGPLALRPLKFLSGGQKSRVAFAKLAWSKPHVVIMDEPTNHLDLETIEALILALQAFKGGVMIVSHDQHFINKVCSELWVVGSGEVAKYPGEFDDYKNEQIAKRKAAGASL 696
BLAST of mRNA_D-herbacea_F_contig110.904.1 vs. uniprot
Match: A0A836CKX3_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKX3_9STRA) HSP 1 Score: 812 bits (2098), Expect = 1.320e-284 Identity = 432/731 (59.10%), Postives = 539/731 (73.73%), Query Frame = 2
Query: 101 VEAVVDAELGAVKELDEDVFAYILGIVLDVDSHGCDPETLAETVGQFLLSSGFVDTDEEAEEKCQALAKRLQKALGMEGASTQHKDEDDGHAPRLLDAPVKIQD--QEGNDREGLDFMWGTDKVRDKFNQQMDWDKHLSKKDLRRAEREQLAFLKEIEKLTGTEADDGEEDISMMVLPDYSSGNNEKDIHVKNFNINVGGLELLDCADLKLAYGRKYGLIGRNGVGKTTLLRHMAAYDIEGFPRHHRVMHVRQEIKPSEKTVIQVVVDSDIERLQLIQQEKEILERQSRRAGAQDGGAPVEGDDTAGVAADEAKLSEIYGRLGQIGAASAEARAAVILSGLGFS--------------------------------------------------QDVQTYPKTLVLVSHDRQFLNEVSTDIVHFLSKKLHYYKGDYDTFVNVRTELAKNQRRAFEASSAKKQHMQEFIDKFRSNAKRASLVQSRIKALDKMEDVEDVEDEAKVTIKLPEPGPIGRPIVQIEGVTFGYDPTNPL-FSNVHFGVDLESRIGIVGPNGAGKSTLLNLILDKLRPLRGEVRRNANLRIAHFTQHAAEQFDYRLNSVDNMIKLFPGAQDQEMRKFLGRFDISGPLALRPLKFLSGGQKSRVAFAKLAWSNPHVVIMDEPTNHLDLETIEGLIVALQAFKGGVMIVSHDQHFITQVCNELWVVGKGEVSKYPGDFEDYKKDQIAKRK 2134
V+AVV+++L A+K+LD DVF Y+ ++ DV+SH CD ETL ETVG FLLSSG ++ + E E K LA+ L+ ALG+ ++ +DE P+LLD V+++D +E + LDFMWGTDKVR +FNQ DWD+H+SKKD+R+AEREQ FL E+E LTG DDGE+DI+MMVLPDYSSGNNEKDIHV NF I +GGL LL+ ADLKL++GRKYGL G+NG+GKTTLLRHMA+YDIEGFPRHHRV+HVRQEIKPSE++V++VV+DSD+ERLQLI + K I R + RA DG + DD A A D + EIY R+ QI A +AE+RAA IL GLGF+ + ++ YPKTL+LVSHDR FLNEV TD +H KKL+YYKG+Y+TF VR+E KNQRRA+EA+ A+++HMQEFIDKFR NAKRASLVQSRIKALDKME++++VE+E LPEP IGRP++ +EGV+FGYD + L F NVHFGVD+ESRI IVGPNGAGKSTLLN+++DKL+P+ G V RN L+IA FTQH AEQFDYRLN+VDNM++++P +Q+MR FLG+F I+G +A RPLKFLSGGQKSRVAFA LA+SNPHV+IMDEPTNHLD+ETI LI AL+ FKG V+ VSHDQHFI+QVC ELWVVGKG+ +K+ G F DYK D +A +K
Sbjct: 5 VQAVVNSQLAALKQLDADVFEYVGSMLADVESHDCDEETLQETVGPFLLSSGMLEDESEVEAKISELAEALRVALGLANGGSKKRDEVIEARPQLLDKMVRMKDGEEEAGSKADLDFMWGTDKVRKQFNQVRDWDQHVSKKDMRKAEREQERFLAELEALTGGVEDDGEDDIAMMVLPDYSSGNNEKDIHVHNFGIEIGGLVLLEAADLKLSFGRKYGLTGKNGIGKTTLLRHMASYDIEGFPRHHRVLHVRQEIKPSERSVLEVVLDSDVERLQLINESKAIAARAAARA---DGTSSA--DDDAQAALDAVRTQEIYDRMNQIDAHTAESRAATILHGLGFTDAQMHGTTSALSGGWRMRVAIAGALFIQPEVLMLDEPTNHLDLEAVIWLQEYLKGYPKTLLLVSHDRAFLNEVCTDTIHLNEKKLNYYKGNYNTFEVVRSEQLKNQRRAYEANKAQREHMQEFIDKFRYNAKRASLVQSRIKALDKMEEIDEVENEIPFEFSLPEPTAIGRPVLGVEGVSFGYDAVHGLLFQNVHFGVDMESRIAIVGPNGAGKSTLLNVMMDKLKPVSGYVHRNPQLKIAAFTQHHAEQFDYRLNAVDNMLRMWPKVPEQDMRSFLGKFRITGNIATRPLKFLSGGQKSRVAFAALAYSNPHVIIMDEPTNHLDMETINALIQALREFKGAVICVSHDQHFISQVCTELWVVGKGKCNKFKGTFMDYKADIMATKK 730
BLAST of mRNA_D-herbacea_F_contig110.904.1 vs. uniprot
Match: A0A6H5JX12_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX12_9PHAE) HSP 1 Score: 652 bits (1683), Expect = 2.410e-225 Identity = 344/431 (79.81%), Postives = 360/431 (83.53%), Query Frame = 2
Query: 1010 AGVAADEAKLSEIYGRLGQIGAASAEARAAVILSGLGFSQDVQ--------------------------------------------------TYPKTLVLVSHDRQFLNEVSTDIVHFLSKKLHYYKGDYDTFVNVRTELAKNQRRAFEASSAKKQHMQEFIDKFRSNAKRASLVQSRIKALDKMEDVEDVEDEAKVTIKLPEPGPIGRPIVQIEGVTFGYDPTNPLFSNVHFGVDLESRIGIVGPNGAGKSTLLNLILDKLRPLRGEVRRNANLRIAHFTQHAAEQFDYRLNSVDNMIKLFPGAQDQEMRKFLGRFDISGPLALRPLKFLSGGQKSRVAFAKLAWSNPHVVIMDEPTNHLDLETIEGLIVALQAFKGGVMIVSHDQHFITQVCNELWVVGKGEVSKYPGDFEDYKKDQIAKRKASGPSL 2152
AGVAADEAKLSEIYGRLGQIGAASAEARAA ILSGLGFS +VQ TYPKTL+LVSHDRQFLNEVSTDI+HFLSKKLHYYKGDYDTFVNVRTELAKNQRRA+EAS+AKK HMQEFIDKFRSNAKRASLVQSRIKAL+KMED DEAKVTI LPEPGPIGRPIVQIEGVTFGYD NPLFSNVHFGVDL+SR+GIVGPNGAGKSTLLNLILDKLRPL GEVRRN NLRIAHFTQHAAEQFDYRLNSVDNMIKLFPG Q+QEMRKFLGRFDISGPLALRPLKFLSGGQKSRVAFAKLAWS PHVVIMDEPTNHLDLETIE LI+ALQAFKGGVMIVSHDQHFI +VC+ELWVVG GEV KYPG+F+DYK +QIAKRKA+G SL
Sbjct: 73 AGVAADEAKLSEIYGRLGQIGAASAEARAATILSGLGFSTEVQNGPTSALSGGWRMRVSIAGALFIEPDVLMLDEPTNHLDLEAVIWLQEYLKTYPKTLLLVSHDRQFLNEVSTDIIHFLSKKLHYYKGDYDTFVNVRTELAKNQRRAYEASAAKKAHMQEFIDKFRSNAKRASLVQSRIKALEKMEDXXXXXDEAKVTIHLPEPGPIGRPIVQIEGVTFGYDARNPLFSNVHFGVDLDSRVGIVGPNGAGKSTLLNLILDKLRPLSGEVRRNPNLRIAHFTQHAAEQFDYRLNSVDNMIKLFPGVQEQEMRKFLGRFDISGPLALRPLKFLSGGQKSRVAFAKLAWSKPHVVIMDEPTNHLDLETIEALILALQAFKGGVMIVSHDQHFINKVCSELWVVGSGEVVKYPGEFDDYKNEQIAKRKAAGASL 503
BLAST of mRNA_D-herbacea_F_contig110.904.1 vs. uniprot
Match: W7U344_9STRA (Abc transporter n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U344_9STRA) HSP 1 Score: 554 bits (1428), Expect = 5.450e-183 Identity = 332/765 (43.40%), Postives = 442/765 (57.78%), Query Frame = 2
Query: 143 LDEDVFAYILGIVLDVDSHGCDPETLAETVGQFLLSSGFVDTDEEAEEKCQALAKRLQKALG-----MEGASTQHKDEDDGHAPRLLDAPVKIQDQ-EGNDREGLDFMWGTDKVRDKFNQQMDWDKHLSKKDLRRAEREQLAFLKEIEKLTGTEADDGEEDISMMVLPDYSSGNNEKDIHVKNFNINVGGLELLDCADLKLAYGRKYGLIGRNGVGKTTLLRHMAAYDIEGFPRHHRVMHVRQEIKPSEKTVIQVVVDSDIERLQLIQQEKEILERQSRRAGAQDGGAPVEGDDTAGVAADEAKLSEIYGRLGQIGAASAEARAAVILSGLGFSQDVQ--------------------------------------------------TYPKTLVLVSHDRQFLNEVSTDIVHFLSKKLHYYKGDYDTFVNVRTELAKNQRRAFEASSAKKQHMQEFIDKFRSNAKRASLVQSRIKALDKMEDVEDVEDEAKVTIKLPEPGPIGRPIVQIEGVTFGYDPTNP-----------------------------------------------LFSNVHFGVDLESRIGIVGPNGAGKSTLLNLILDKLRPLRGEVRRNANLRIAHFTQHAAEQFDYRLNSVDNMIKLFPGAQDQEMRKFLGRFDISGPLALRPLKFLSGGQKSRVAFAKLAWSNPHVVIMDEPTNHLDLETIEGLIVALQAFKGGVMIVSHDQHFITQVCNELWVVGKGEVSKYPGDFEDYKKDQIAK 2128
LDE + Y+ ++ D P+ L +VG FLLS+ F D E C L+ L +A G AS + KD+ P LL AP+ ++ D + +D MWG DKVR N+Q +SK+ +SMM+LPDYSSG+ EKDI+V F + G ELL ADL++AYGR+YGLIG NG+GKTTLL+H+AA++IEGFPRHHRV+HV+QE++ S KTV++ V+ SD+ER L+++ E V AD +L+EIY RL IG+ SAEARAA IL+GL FS ++Q TY T++LVSHDR FLNEV+TDIV F +K L YY+G+YDTF VR+E AKNQRR +EA+ AK+ HMQ+FIDKFR NA RA+LVQSRIKAL+K+E V+ ED+ + LP P P+GRP++ IE V+FGY P LF NV FGVDLE+RIG+VG NGAGKSTLLNLILDKLRP G + R+ NLR+A FTQH +QFD RL++V+N +FP + QE+R +G+F +SG A++P++FLSGGQKSR AFA LA PH+VI+DEPTNHLD++TI+ LI AL+ F+GG+++VSHDQHFI QV ++++V G + ++ G F++YKK ++K
Sbjct: 23 LDEQIADYLTSVLEDDPLQ--KPDDLEASVGPFLLSTEFAKDDAEVSSLCLRLSSALSQAFGDDAGHQRAASFRGKDD----VPALLSAPLSFKENTSAADDKLMDLMWGKDKVRQARNEQFFNTSSISKR---------XXXXXXXXXXXXXXXXXXXXXVSMMILPDYSSGSGEKDINVLGFVLRFAGQELLSNADLRMAYGRRYGLIGANGIGKTTLLKHIAAFEIEGFPRHHRVLHVKQEVRSSGKTVLETVLQSDVEREALMEEXXXXXXXXXXXXXXXXXXXXXEE-----VEADSKRLTEIYERLNIIGSNSAEARAAAILNGLQFSLEMQASSTCDLSGGWRMRVALASALFIEPDLLLLDEPTNHLDLEAVLWLQEYLKTYKHTVLLVSHDRAFLNEVTTDIVEFKNKTLTYYRGNYDTFEAVRSEKAKNQRRLYEANMAKRAHMQDFIDKFRYNANRAALVQSRIKALEKLEVVDPPEDDTQFRFHLPIPEPLGRPVINIESVSFGYPKRGPGSVEDEGDGKRKKXXXQAGEEEAEDQHSENDKAEPVVPKVPAEIGKVLFENVDFGVDLETRIGVVGANGAGKSTLLNLILDKLRPTEGHIFRHHNLRLASFTQHHGDQFDLRLSAVENFESMFPKSDTQELRSLVGKFGLSGNDAIKPMRFLSGGQKSRAAFALLAHRKPHIVILDEPTNHLDMDTIQALIEALKEFRGGLLVVSHDQHFIEQVTSDIYVCGNNAIKRFNGTFDEYKKVALSK 767
BLAST of mRNA_D-herbacea_F_contig110.904.1 vs. uniprot
Match: A0A7S3Q841_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q841_9STRA) HSP 1 Score: 542 bits (1396), Expect = 6.970e-178 Identity = 338/772 (43.78%), Postives = 467/772 (60.49%), Query Frame = 2
Query: 137 KELDEDVFAYILGIVLDVD--------SHGCDPET-LAETVGQFLLSSGFVDTDEEAEEKCQALAKRLQKALGMEGASTQHKDEDDGHAPRLLDAPVKIQDQEGNDREGLDFMWGTDK-VRDKFNQQMDWDKH-LSKKDLRRAEREQLAFLKE----IEKLTGTEADDGEEDI-SMMVLPDYSSGNNEKDIHVKNFNINV-GGLELLDCADLKLAYGRKYGLIGRNGVGKTTLLRHMAAYDIEGFPRHHRVMHVRQEIKPS--EKTVIQVVVDSDIERLQLIQQEKEILERQSRRAGAQDGGAPVEGDDTAG-----------------------VAADEAKLSEIYGRLGQIGAASAEARAAVILSGLGFSQDVQT--------------------------------------------------YPKTLVLVSHDRQFLNEVSTDIVHFLSKKLHYYKGDYDTFVNVRTELAKNQRRAFEASSAKKQHMQEFIDKFRSNAKRASLVQSRIKALDKMEDVEDVEDEAKVTIK------LPEPGPIGRPIVQIEGVTFGYDPTNP----LFSNVHFGVDLESRIGIVGPNGAGKSTLLNLILDKLRPLRGEVRRNANLRIAHFTQHAAEQFDYRLNSVDNMIKLFPGAQDQEMRKFLGRFDISGPLALRPLKFLSGGQKSRVAFAKLAWSNPHVVIMDEPTNHLDLETIEGLIVALQAFKGGVMIVSHDQHFITQVCNELWVVGKGEVSKYPGDFEDYKKDQI---AKRKA 2137
+++DED+ Y++G++ D D S D ++ + + +G FL SSG D+ + C A+ + K+ E A + KDE ++ ++ ++ +++ +MWGTD V N+Q D K +S KD R+ ++E KE IE L E +G+ + S+MVLPDY SG NEKDIH +N +++ G LLD ADLK A+ R+YGL+G+NGVGKTTLL+ +A+ +IEGFPRHHRV+HVRQE+K + + +V+Q V++SD ER L+ +EKE+L + + GA EG+ A + D +L ++Y RL + A SAE+RAA+ILSGL F+ D+Q Y T+V+VSHDR FLNEV +I+ F K+L YYKGDYDT+V E+ +NQ R ++A KKQHM +FI KFR+NAKRAS+VQSRIKA++KM D+E AKV I+ +P P P+GRPI+ I+ V+F Y + + V+FGVDL+SRIGI+G NGAGKSTLLNLI DKL+PL G V RN LRI FTQH+A++FD RL+SV+NM+ LFP A DQEMR F+GRF I G A++P+ LSGGQKSRVAF+ L++ PHV+IMDEPTNHLD+E+I+ LI A++ F+GG+M+VSHDQ+FIT C +LWVVG G+ K+ G FE YKK+ + AKR A
Sbjct: 29 EDIDEDLIDYLVGMICDGDTVTLTEVASADIDEDSEIYQAIGPFLESSGC--DDDLIIKACTAVKELALKSAPSESAGGK-KDEARKLRQGMVSMSTELDNKTEAEQDAERYMWGTDSGVAQYINEQKDAHKDTVSSKDKRKQKQELERIRKEYQSKIEALEREEEREGKNAVVSVMVLPDYDSGRNEKDIHCRNVQVSLDNGRCLLDNADLKFAHMRRYGLVGKNGVGKTTLLKAIASMEIEGFPRHHRVLHVRQEVKSAGTDMSVLQSVIESDAERNALLAKEKELLAKLENHKNDGENGASSEGEGAAENLTKKREELNKQLQKDDGDMDEEFSKDLKELDKVYARLNLLSADSAESRAAMILSGLQFTPDMQAGPTSALSGGWRMRVSLAASLFIEPDLLLLDEPTNHLDLEAVLWLESYLVEYKHTVVVVSHDRGFLNEVCNEIIEFDKKRLTYYKGDYDTYVRTSEEMVRNQMRVYQAYCDKKQHMMDFIVKFRANAKRASIVQSRIKAVEKM----DLEAPAKVEIEPVWRFSIPNPEPLGRPIIAIDDVSFDYHKSKKEAEYILQKVNFGVDLDSRIGILGANGAGKSTLLNLITDKLQPLSGSVSRNGRLRIGMFTQHSADKFDLRLSSVENMLALFPDATDQEMRSFIGRFQIQGGEAVKPMLMLSGGQKSRVAFSALSYQRPHVIIMDEPTNHLDMESIDALIEAVKDFRGGLMVVSHDQYFITNTCKDLWVVGDGKAEKFRGGFEAYKKETLERTAKRVA 793
BLAST of mRNA_D-herbacea_F_contig110.904.1 vs. uniprot
Match: B8CB70_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CB70_THAPS) HSP 1 Score: 523 bits (1346), Expect = 6.260e-173 Identity = 290/608 (47.70%), Postives = 397/608 (65.30%), Query Frame = 2
Query: 497 DKHLSKKDLRRAERE---QLAFLKEIEKLTGTEADDGEEDISMMVLPDYSSGNNEKDIHVKNFNINV-GGLELLDCADLKLAYGRKYGLIGRNGVGKTTLLRHMAAYDIEGFPRHHRVMHVRQEIKPS--EKTVIQVVVDSDIERLQLIQQEKEILERQSRRAGAQDGGAPVEGDDTAGVAADEAKLSEIYGRLGQIGAASAEARAAVILSGLGFSQDVQT--------------------------------------------------YPKTLVLVSHDRQFLNEVSTDIVHFLSKKLHYYKGDYDTFVNVRTELAKNQRRAFEASSAKKQHMQEFIDKFRSNAKRASLVQSRIKALDKMEDVEDVEDEAKVTIKLPEPGPIGRPIVQIEGVTFGYDPTNP--LFSNVHFGVDLESRIGIVGPNGAGKSTLLNLILDKLRPLRGEVRRNANLRIAHFTQHAAEQFDYRLNSVDNMIKLFPGAQDQEMRKFLGRFDISGPLALRPLKFLSGGQKSRVAFAKLAWSNPHVVIMDEPTNHLDLETIEGLIVALQAFKGGVMIVSHDQHFITQVCNELWVVGKGEVSKYPGDFEDYKKDQI---AKRKA 2137
DK ++K+L +A RE ++AFL+ E E + G+ +S MVLPDY SG NE+DIHV+N ++++ G LLD +LK A+ R+YGL+G+NGVGKTTLL+ +AA+++EG PRHHR++HVRQEI+ + + +V+Q V+D+D+ER LI++E R A D A AD +L E+Y RL +G+ SAE RA+ ILSGL F+ +Q+ Y TL++VSHDR FLNEV TD + F ++KL+YYKGDYDT+V E KN R ++A K++HM EFI KFR++A RA LVQSR+KA++KM+ E V E T +P P P+GRPI+ I+ V F Y+ + V+FGVDL+SRIGI+GPNGAGKSTLLNLI+D+L P +G + RN NLRI HFTQH+A++FD L++V+NM+ LF A+DQ MR FLGRF I G AL+P+ LSGGQKSRVAFA LA+ PHV++MDEPTNHLD+E+I+ L+ A++ F+GG+++VSHDQ FIT C ELWVVG+G+ +++ GDF +YKK+ + AKR A
Sbjct: 17 DKRKARKELEQARREYEAKVAFLESQE-----EGEAGKASVSSMVLPDYRSGRNERDIHVRNVSLSLDNGTSLLDDGELKFAHQRRYGLVGKNGVGKTTLLKAIAAFEVEGMPRHHRILHVRQEIRAAGGDISVLQAVMDADVERNTLIEEE--------RNADGNDADASFN--------ADLKRLDEVYERLQILGSDSAEGRASTILSGLQFTPSMQSGPTSALSGGWRMRVALAAALFIEPDLLMLDEPTNHLDLEAVLWLESYLQSYRHTLIVVSHDRSFLNEVCTDTIEFKNRKLNYYKGDYDTYVRTSEENVKNLMRVYQAYQDKREHMMEFITKFRASANRAKLVQSRVKAVEKMDSPEPVTIEPVWTFSIPNPEPLGRPIISIDDVWFDYNAPKDEWILQQVNFGVDLDSRIGILGPNGAGKSTLLNLIMDRLTPNKGSISRNGNLRIGHFTQHSADKFDLHLSAVENMLNLFSEAEDQAMRSFLGRFQIQGSDALKPMMMLSGGQKSRVAFASLAYQKPHVIVMDEPTNHLDMESIDALVGAVKDFRGGLIVVSHDQFFITNTCGELWVVGEGKTTRFRGDFNEYKKETLERTAKRVA 603
BLAST of mRNA_D-herbacea_F_contig110.904.1 vs. uniprot
Match: A0A7S2R4V8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R4V8_9STRA) HSP 1 Score: 524 bits (1350), Expect = 1.900e-171 Identity = 315/747 (42.17%), Postives = 436/747 (58.37%), Query Frame = 2
Query: 119 AELGAVKELDEDVFAYILGIVLDVDSHGCDPETLAETVGQFLLSSGFVDTDEEAEEKCQALAKRLQKALGMEGASTQHKD---EDDGHAPRLLDAPVKIQ-----DQEGNDREGLDFMWGTDKVRDKFNQQMDWDKHLSKKDLRRAEREQLAFLKEIEKLTGTEADDGEEDISMMVLPDYSSGNNEKDIHVKNFNINVGGLELLDCADLKLAYGRKYGLIGRNGVGKTTLLRHMAAYDIEGFPRHHRVMHVRQEIKPSEKTVIQVVVDSDIERLQLIQQEKEILERQSRRAGAQDGGAPVEGDDTAGVAADEAKLSEIYGRLGQIGAASAEARAAVILSGLGFSQDV--------------------------------------------------QTYPKTLVLVSHDRQFLNEVSTDIVHFLSKKLHYYKGDYDTFVNVRTELAKNQRRAFEASSAKKQHMQEFIDKFRSNAKRASLVQSRIKALDKMEDVEDVE--DEAKVTIKLPEPGPIGRPIVQIEGVTFGYDPT--NP-------------LFSNVHFGVDLESRIGIVGPNGAGKSTLLNLILDKLRPLRGEVRRNANLRIAHFTQHAAEQFDYRLNSVDNMIKLFPGAQDQEMRKFLGRFDISGPLALRPLKFLSGGQKSRVAFAKLAWSNPHVVIMDEPTNHLDLETIEGLIVALQAFKGGVMIVSHDQHFITQVCNELWVVGKGEVSKYPGDFEDYKKDQIAKRK 2134
A ++ +DED+ YI +V D E V FL+S+G +TD EAE AL RLQ AL + GA + +DDG P LL APV + Q + + DF+WGTDKVR N M+ +K+ RRA RE E ++ I+ M +P++ ++DI V F+IN GG LL A+L+L+YGR+YGL+G+NGVGKTTLL+HMAA+DI GFPRHHRV+HVRQE S+ TV+ V+ +D+E + L+Q+EK + S+ + AP + V+ KL ++Y RL I A AE RA+ ILSGLGFS+ + Q+Y T+++VSHDR FLNEV TDIV F LHYYKGD+DTF +++ NQ++ +EA + K+QHMQEF+DKFR+NAKRAS+VQSRIKA++KM+ E +EA P P P+GRPI+Q+E F Y + NP LF +V FGV++++RIGIVG NG GKSTLLNL+L LRP G+V RI FTQH ++ + ++N++++FP + +R LG+FD+SG +A+RP LSGGQKSRV FA LA+S PH+++MDEPTNHLD++TI+ LI A++ F+GGV++VSHDQHFI +VCNE+WVV V ++ G F +YK + +++
Sbjct: 9 AAAAVLEGVDEDLIDYICSVVSSGD---------LEAVPPFLISAGAAETDAEAE----ALCARLQAALALGGAEDESLPPPVKDDGDVPVLLKAPVSMGGGESFSQSSSKQMMTDFLWGTDKVRRDMNSSMETAHVTNKRTERRAARELEKARLRFE-AAAAQSSQANSQITRMAMPEFDGQPRDRDIRVAAFDINFGGRTLLSNAELRLSYGRRYGLMGKNGVGKTTLLQHMAAFDIPGFPRHHRVLHVRQEAAASDVTVLDTVLSADVELITLLQEEKAL----SQTLDSFGDEAPADK-----VSQTSEKLQQVYERLRFIDADGAEGRASSILSGLGFSETMKQTKLNDLSGGWRVRTALAGALFIQPHLLMLDEPTNHLDLEAVLWLQDYLQSYKHTVLVVSHDRTFLNEVCTDIVLFQDLGLHYYKGDFDTFERTQSDQLTNQKKVYEAYTEKRQHMQEFVDKFRANAKRASMVQSRIKAIEKMDAEAPPEPTEEAVFRFSFPVPEPLGRPILQLEEAAFSYSASLANPDAAEAAKASAAPVLFRDVDFGVEMDTRIGIVGKNGCGKSTLLNLLLGNLRPTEGQVHIKPTARIKVFTQHHSDMLSLAYSPIENLMQMFPKDPEAALRSHLGKFDVSGDMAIRPCSSLSGGQKSRVVFAALAYSRPHIIVMDEPTNHLDIQTIDALIHAVRDFRGGVILVSHDQHFINKVCNEIWVVADCSVRRFDGGFNEYKATALRQQR 732
BLAST of mRNA_D-herbacea_F_contig110.904.1 vs. uniprot
Match: A0A7S4RCN1_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RCN1_9STRA) HSP 1 Score: 512 bits (1318), Expect = 2.130e-166 Identity = 320/760 (42.11%), Postives = 448/760 (58.95%), Query Frame = 2
Query: 143 LDEDVFAYILGIVLDVDSHGCDPETLAET-----VGQFLLSSGFVDTDEEAEEKCQALAKRLQKALGMEGASTQHKDEDDGH---APRLLDAPVKIQDQEGNDREGLDFMWGTD-KVRDKFNQQMD-WDKHLSKKDLRRAEREQLAFLKEIE----KLTGTEADDGEEDISMMVLPDYSSGNNEKDIHVKNFNINV-GGLELLDCADLKLAYGRKYGLIGRNGVGKTTLLRHMAAYDIEGFPRHHRVMHVRQEIK--PSEKTVIQVVVDSDIERLQLIQQEKEILERQSRRAGAQDGG-------------APVEGDDTAGVAADEAKLSEIYGRLGQIGAASAEARAAVILSGLGFSQDVQT--------------------------------------------------YPKTLVLVSHDRQFLNEVSTDIVHFLSKKLHYYKGDYDTFVNVRTELAKNQRRAFEASSAKKQHMQEFIDKFRSNAKRASLVQSRIKALDKM--EDVEDVEDEAKVTIKLPEPGPIGRPIVQIEGVTFGYDPT----------NPLFSNVHFGVDLESRIGIVGPNGAGKSTLLNLILDKLRPLRGEVRRNANLRIAHFTQHAAEQFDYRLNSVDNMIKLFPGAQDQEMRKFLGRFDISGPLALRPLKFLSGGQKSRVAFAKLAWSNPHVVIMDEPTNHLDLETIEGLIVALQAFKGGVMIVSHDQHFITQVCNELWVVGKGEVSKYPGDFEDYKK---DQIAKRKA 2137
+DED+ +Y+ G++ + G E L+E +G FL S G +T + C A+ + + G AS + + DG ++ + ++ + F+WGTD K N+Q + + +S KD R+ +E KE E ++ EA+ G+ +S MVLPDYS G NEKDI V+N ++++ G +LD A+LK A+ R+YGL+G+NG+GKTTLL+ +A+ +I GFPRHHRV+HVRQE S+ +VI V+ +D+ER L+++EKE+L R G G A ++ D +L E+Y RL + + SAE+RA+VIL+GL F+ ++Q Y TLV+VSHDR FLNEV TD++ F + KL YYKG+YDT+V + KN R ++A K+ HM EFIDKFR NAKRA+LVQSRIKA++KM E E +E E +P P P+GRPIV I+ +F Y T L +V+FG+DL+SRIGI+G NGAGKSTLLNLI+DKL P G + RN LRI HFTQH+A++FD +L++V+NM+ F G DQEMR FLG+F I G A++P+ LSGGQKSRVAFA LA+ PHV+IMDEPTNHLD+E+I+ L+ A+Q F+GG+++VSHDQ FIT C ELWVVG+G+ +++ GDF +YKK ++ AKR A
Sbjct: 23 VDEDMVSYLAGMLTE----GHSVEELSENGGEEALGPFLESLGCDETV--LTKACNAVKEAA--SSGSSVASKKREVSTDGIRKLGKGAVNMASNLNSVSQHEVDANRFLWGTDSKTLQMTNEQREAHGEAVSTKDRRKQRQELERTRKEFEAQAARIAAEEAEHGKSAVSAMVLPDYSVGRNEKDIQVRNVSLSLDSGTAILDDAELKFAHQRRYGLVGKNGIGKTTLLKAIASMEIHGFPRHHRVLHVRQETSFGASDISVIDAVLQADVERNVLLEEEKELLVRLDAAGGTTGEGDAKSLLEKRQKLQAKIQTSSDGSFEKDLKRLDEVYARLNILSSDSAESRASVILAGLQFTPEMQRGPTSALSGGWRMRVSLAAALFIEPDLLLLDEPTNHLDLEAVLWLESYLQLYRHTLVVVSHDRGFLNEVCTDVIEFKNLKLTYYKGNYDTYVKTSDDNIKNSMRVYQAYQDKRAHMMEFIDKFRCNAKRATLVQSRIKAVEKMDLEAPEPIEIEPVWRFGIPNPEPLGRPIVSIDDASFDYKTTVEGGGKKPSGQYLLQDVNFGIDLDSRIGILGANGAGKSTLLNLIMDKLEPTSGSISRNGRLRIGHFTQHSADKFDLQLSAVENMMATFEGRGDQEMRSFLGKFQIQGVDAVKPMLMLSGGQKSRVAFATLAYYRPHVIIMDEPTNHLDMESIDALVEAVQDFRGGLVVVSHDQFFITSTCGELWVVGEGKATRFRGDFNEYKKLTLERTAKRVA 774
BLAST of mRNA_D-herbacea_F_contig110.904.1 vs. uniprot
Match: W4FIM2_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FIM2_9STRA) HSP 1 Score: 499 bits (1286), Expect = 9.820e-163 Identity = 304/724 (41.99%), Postives = 423/724 (58.43%), Query Frame = 2
Query: 143 LDEDVFAYILGIVLDVDSHGCDPETLAETVGQFLLSSGFVDTDEEAEEKCQALAKRLQKALGMEGASTQHKDEDDGHAPRLLDAPVKIQDQ----EGNDREGLDFMWGTDKVRDKFNQQMDWDKHL-SKKDLRRAEREQLAFLKEIEKLTGTEADDGEEDISMM-----VLPDYSSGNNEKDIHVKNFNINVGGLELLDCADLKLAYGRKYGLIGRNGVGKTTLLRHMAAYDIEGFPRHHRVMHVRQE----IKPSEKTVIQVVVDSDIERLQLIQQEKEILERQSRRAGAQDGGAPVEGDDTAGVAADEAKLSEIYGRLGQIGAASAEARAAVILSGLGFSQDV--------------------------------------------------QTYPKTLVLVSHDRQFLNEVSTDIVHFLSKKLHYYKGDYDTFVNVRTELAKNQRRAFEASSAKKQHMQEFIDKFRSNAKRASLVQSRIKALDKM--EDVEDVEDEAKVTIKLPEPGPIGRPIVQIEGVTFGYDPTNP-LFSNVHFGVDLESRIGIVGPNGAGKSTLLNLILDKLRPLRGEVRRNANLRIAHFTQHAAEQFDYRLNSVDNMIKLFPGAQDQEMRKFLGRFDISGPLALRPLKFLSGGQKSRVAFAKLAWSNPHVVIMDEPTNHLDLETIEGLIVALQAFKGGVMIVSHDQHFITQVCNELWVVGKGEVSKYPGDFEDYKK 2113
LDE + Y++ I+ D D G DP L +T+ FLLSSGF D ++EA C +L +Q A + A+ DD + LD ++D E ++ MWG + +R N MD + S++ +R+ +++L+ L E D +ED M VLPD S+ N EKDIHV N +N G +L LKL +GR+YGLIG+NG GKTTLLR M+ Y+IE FPRH R+ HV QE + E +V+ VV+ +D ER L+ +EK++LE ++ +++ RL QI + SAE+RA IL+GL F + V +TYPKTL++VSHDR FLN+V+TD ++ ++L Y++G++ +F N + EL KNQR+A+EA K HMQEFID+FR NAK+A LVQSR+KAL+K+ VE+ ED + P P P+GRPI+ +E V FGY P LF +V+FG+D+ SRIGI+G NG+GKSTL+NL+L KL P G+ RN +RI+ FTQH + D +V+NM++LFPG + E R LGRF++SG LA++P + LSGGQKSRV FA L W PHVV++DEPTNHLD+ETI+ LI AL+ +KGGV+IVSHDQHF+ +C ELWVVG +V+++ G +YKK
Sbjct: 17 LDEALVDYMVSILSDYD--GSDP--LVDTIAPFLLSSGFTDDEDEANRYCSSLQAAMQDAGLLATAA------DDTF--KKLDVVQSMEDMSRATEAEMNGIMERMWGFENIRKTKNYSMDACANTQSQRQIRKEAKKELSEL---------EKDKMDEDEDRMWEDTRVLPDMSTDNGEKDIHVDNVTMNFKGQTILSNTSLKLIFGRRYGLIGKNGAGKTTLLRFMSHYEIEKFPRHVRMQHVEQESASKLSLVEDSVLSVVLAADYERTLLLAEEKQLLESNDNPE----------------------RIHKVHERLQQIDSDSAESRARTILAGLQFPESVVDGPAKALSGGWRMRTALAGALFMSPDLLLLDEPTNHLDLEAVMWLEKYLETYPKTLIVVSHDRNFLNQVTTDTIYLAKQQLSYHRGNFQSFENTQEELLKNQRKAYEAQQMKVSHMQEFIDRFRCNAKKAPLVQSRVKALEKIMRTAVEEPEDPRAFKMNFPPPEPLGRPIISVENVAFGYGDGRPELFHDVNFGIDMSSRIGILGVNGSGKSTLINLMLGKLDPTHGKCVRNPRVRISTFTQHHVDSLDLGKTAVENMMELFPGHEPDEFRTHLGRFNLSGELAMKPTRKLSGGQKSRVGFAVLTWRLPHVVVLDEPTNHLDIETIDALIDALRNYKGGVVIVSHDQHFVNSICTELWVVGDRKVTRFQGSMAEYKK 697
BLAST of mRNA_D-herbacea_F_contig110.904.1 vs. uniprot
Match: A0A2D4BP10_PYTIN (ABCF/EF-3b transporter-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BP10_PYTIN) HSP 1 Score: 498 bits (1283), Expect = 3.630e-162 Identity = 309/721 (42.86%), Postives = 426/721 (59.08%), Query Frame = 2
Query: 143 LDEDVFAYILGIVLD-VDSHGCDPETLA----ETVGQFLLSSGFVDTDEEAEEKCQALAKRLQKALGMEGASTQHKDEDDGHAPRLLDAPVKIQDQEGND------REGLDFMWGTDKVRDKFNQQMDWDKHL-SKKDLRRAEREQLAFLKEIEKLTGTEADDGEEDISMMVLPDYSSGNNEKDIHVKNFNINVGGLELLDCADLKLAYGRKYGLIGRNGVGKTTLLRHMAAYDIEGFPRHHRVMHVRQE----IKPSEKTVIQVVVDSDIERLQLIQQEKEILERQSRRAGAQDGGAPVEGDDTAGVAADEAKLSEIYGRLGQIGAASAEARAAVILSGLG---------------------------------------FSQDVQTYPKTLVLVSHDRQFLNEVSTDIVHFLSKKLHYYKGDYDTFVNVRTELAKNQRRAFEASSAKKQHMQEFIDKFRSNAKRASLVQSRIKALDKM---EDVEDVEDEAKVTIKLPEPGPIGRPIVQIEGVTFGYDPTNPL-FSNVHFGVDLESRIGIVGPNGAGKSTLLNLILDKLRPLRGEVRRNANLRIAHFTQHAAEQFDYRLNSVDNMIKLFPGAQDQEMRKFLGRFDISGPLALRPLKFLSGGQKSRVAFAKLAWSNPHVVIMDEPTNHLDLETIEGLIVALQAFKGGVMIVSHDQHFITQVCNELWVVGKGEVSKYPGDFEDYKKDQIAK 2128
LDE + Y+ +V+ V+ H D LA E+V FLLS+GFVD D A + C LA +L + G+ G T KD+ R LD+ I++ D +E +D MWG +R K N +M+ S + +R+A + L L E + E D EDI +LPD S N E+DIHV F +N G LL LKL GR+YGLIG+NG GKTTLLR ++ Y++EGFPRH R+ V QE + K+V++VV+ SD ER L+++EKE+L D T+G ++L +IY RL I + +AE+RA ILSGL ++ Y KT+++VSHDR FLN V+TDI+H ++KL YYKGDY+TF EL + QR+A+EA K + MQEFID+FR+NAKRA+LVQSR+KALDK+ E +++ EDE + P +GRPI+ ++GV+F Y+ +PL F +VH G+D+ SRIGI+G NG+GKSTL+N +L KLRP G V N +RI+ F+QH + D ++V+NM L+PG + R LGRF++SG LA++P + LSGGQKSRV FA + W PHVV++DEPTNHLD+ETI+ LI AL+ FKGGV++VSHDQHF+ VC ELWVVG +V ++ G ++YK + K
Sbjct: 19 LDEHILEYLGSVVVGLVEEHPADVAALAALMEESVAPFLLSTGFVDDDSAATQCCTRLAAQLFER-GVCGDGTARKDD-----VRRLDSTHSIEELARADGSVQQAQELMDRMWGFHDIRKKTNAEMEAAMSTQSARQVRKAVK--LGKLMEERDIAAAELDREWEDI--RILPDLSQDNGERDIHVPRFTMNFKGKTLLSDTSLKLVQGRRYGLIGKNGAGKTTLLRFISHYELEGFPRHVRIQLVEQESASKLSLETKSVLEVVLASDYERHMLLEEEKELL-----------------ADTTSGTX-HSSRLKQIYDRLTAIDSDTAESRARTILSGLHALSGGWRMRTALAGALFMAPDLLLLDEPTNHLDLEAVIWLEHYLEKYEKTMIVVSHDRNFLNSVTTDIIHLNNQKLTYYKGDYNTFEKTEKELMRQQRKAYEAQQLKIKQMQEFIDRFRANAKRAALVQSRVKALDKILREELIDEPEDERAFKMHFPPAEALGRPIIAVDGVSFRYNENSPLLFKDVHMGIDMSSRIGILGVNGSGKSTLINXMLGKLRPSGGGVTHNPRVRISTFSQHHIDSLDLSKSAVENMKTLYPGIEPDLFRSHLGRFNLSGELAIKPTRTLSGGQKSRVGFAIMTWRLPHVVVLDEPTNHLDMETIDALIDALKNFKGGVVVVSHDQHFVNXVCEELWVVGNEKVERFHGSMDEYKTRVLKK 711 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig110.904.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig110.904.1 >prot_D-herbacea_F_contig110.904.1 ID=prot_D-herbacea_F_contig110.904.1|Name=mRNA_D-herbacea_F_contig110.904.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=692bp MSNDAVAVEAVVDAELGAVKELDEDVFAYILGIVLDVDSHGCDPETLAETback to top mRNA from alignment at D-herbacea_F_contig110:443969..468386- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig110.904.1 ID=mRNA_D-herbacea_F_contig110.904.1|Name=mRNA_D-herbacea_F_contig110.904.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=24418bp|location=Sequence derived from alignment at D-herbacea_F_contig110:443969..468386- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig110:443969..468386- >mRNA_D-herbacea_F_contig110.904.1 ID=mRNA_D-herbacea_F_contig110.904.1|Name=mRNA_D-herbacea_F_contig110.904.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=4152bp|location=Sequence derived from alignment at D-herbacea_F_contig110:443969..468386- (Desmarestia herbacea DmunF female)back to top |