mRNA_D-herbacea_F_contig110.898.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig110.898.1 vs. uniprot
Match: D7G8B5_ECTSI (Mitochondrial carrier protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8B5_ECTSI) HSP 1 Score: 516 bits (1329), Expect = 1.230e-171 Identity = 301/450 (66.89%), Postives = 335/450 (74.44%), Query Frame = 1
Query: 214 MRFQCLSEEIAAAPVPMEITPPQRMLSACAGVLMTGVIVTPMDVVKTRVQAAQAEAVSRHAAASSLGSGGGGGCYSEPCDKCRQ-QGRPYTTSARA--------ASSSSM-----AVAGAGAVRQRPPALPSGTIAALNHIARWEGPRGLYRGLDISLVMAIPATVIYYTVYDDFLSRLEKAGAGKLLAPSVAGSTARVLATICMAPLELVRTRVQSE-----------KVVEEVIVGAARGGXXXXXXXXGAFARLPLV-SVGRALATVFREEGAAALWRGVGTTMWRDVPFSMVYWLGYENLKAGLGCGR--GKRREGVGGEGGR-TQSPAEERGSADFLLRSFTAGAMSGGVASLLTHPFDVVKTQQQVVLKGFDTDGGCEHRPPPPKRKPPGTFDVMRSIVDSRGPAGLFTGALARVGKVAPACAIMMFSYEAGKRFFGQRNAEAA 1476
M FQCLSE+IAAAPVPM++TP QRM+SACAGVL T ++VTPMDVVKTRVQAAQAE VS+ A SSL +G C +E C +C QGR YTTSARA ASS++ A A R+R PALP+GT+AAL HIARWEGPRGLYRGLD SLVMAIP+TV+YYTVYDDFL+RLEKAG G L AP+ AGS+AR+LAT+ MAPLELVRTR QS V G RG G + +PLV SVGR L VF+EEG AALWRGVGTTMWRDVPFSMVYWLGYENLKAGLGCGR G G GGR T AEERGSADFLLRS AGA+SG VASLLTHPFDVVKTQ+QV++ + GCEHRPPPP R+ PGTFDVMR+IV S+GPAGLFTGALARVGKVAPACAIMM SYEAGKRFFG+RNA AA
Sbjct: 1 MPFQCLSEDIAAAPVPMDVTPTQRMMSACAGVLATSLVVTPMDVVKTRVQAAQAEYVSQQTA-SSLNAGR---CGNENCHQCAAPQGRTYTTSARATLAGFDGTASSAARLALEAATTAAPPPRERIPALPTGTVAALMHIARWEGPRGLYRGLDASLVMAIPSTVLYYTVYDDFLARLEKAGVGNLAAPATAGSSARLLATVVMAPLELVRTRAQSHGXXXXXXXXXXXXXXXVATGPGRGA--------GLWGEIPLVGSVGRDLTKVFQEEGMAALWRGVGTTMWRDVPFSMVYWLGYENLKAGLGCGRKGGAPAASAAGGGGRGTAGLAEERGSADFLLRSLVAGAVSGMVASLLTHPFDVVKTQRQVLVDVVP-ESGCEHRPPPPPRREPGTFDVMRNIVKSKGPAGLFTGALARVGKVAPACAIMMISYEAGKRFFGERNAAAA 437
BLAST of mRNA_D-herbacea_F_contig110.898.1 vs. uniprot
Match: T1J4G9_STRMM (Uncharacterized protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1J4G9_STRMM) HSP 1 Score: 196 bits (498), Expect = 5.910e-52 Identity = 144/411 (35.04%), Postives = 201/411 (48.91%), Query Frame = 1
Query: 259 PMEITPPQRMLSACAGVLMTGVIVTPMDVVKTRVQAAQAEAVSRHAAASSLGSGGGGGCYSEPCDKCRQQGRPYTTSARAASSSSMAVAGAGAVRQRPPALPSGTIAALNHIARWEGPRGLYRGLDISLVMAIPATVIYYTVYDD----FLSRLEKAGAGKLLAPSVAGSTARVLATICMAPLELVRTRVQSEKVVEEVIVGAARGGXXXXXXXXGAFARLPLVSVGRALATVFREEGAAALWRGVGTTMWRDVPFSMVYWLGYENLKAGLGCGRGKRREGVGGEGGRTQSPAEERGSADFLLRSFTAGAMSGGVASLLTHPFDVVKTQQQVVL---KGFDTDGGCEHRPPPPKRKPPGTFDVMRSIVDSRGPAGLFTGALARVGKVAPACAIMMFSYEAGKRFFGQRNAE 1470
P ++TP Q+M ++C G ++T V VTP+DVVK R+Q Q + CY C+ P + G + RP +GT+ A I + EG L+ GL +L+MA+PAT+IY+T Y+ F E+ +LAP +AGSTAR+LA ++PLELVRT++QS+K+V V +A+ + R EG +LWRG ++ RDVPFS +YW YE LKA G G SF AGA SGG+A++LT PFDVVKT +Q+ L + + R P +K T+ +++ I GP+ LFTG + RV KVAPACAIM+ S+E GK FF +RN E
Sbjct: 15 PYDLTPLQQMAASCTGAMITSVFVTPLDVVKIRLQTQQKAFMKNK-------------CYLF-CNGLMDHLCPCFSDKNG-----------GYLISRPTVRFNGTVDAFVKIVQIEGLASLWSGLPPTLLMAVPATMIYFTAYEQLRNYFTKMFEENKGYVMLAPMIAGSTARILAASVISPLELVRTKMQSKKMVYR--------------------------DVHKAVRDLVRHEGFGSLWRGYIPSVMRDVPFSAIYWSNYEYLKATYG------------------------GPTPTFGFSFLAGATSGGIAAVLTLPFDVVKTHRQIELGEKEIYSAKSVSRTRFLDPPQKSAKTYTILKRIYYQSGPSALFTGIVPRVIKVAPACAIMISSFEYGKAFFRKRNEE 350
BLAST of mRNA_D-herbacea_F_contig110.898.1 vs. uniprot
Match: A0A1Z5KY78_ORNMO (Uncharacterized protein (Fragment) n=1 Tax=Ornithodoros moubata TaxID=6938 RepID=A0A1Z5KY78_ORNMO) HSP 1 Score: 192 bits (488), Expect = 1.590e-50 Identity = 143/414 (34.54%), Postives = 205/414 (49.52%), Query Frame = 1
Query: 268 ITPPQRMLSACAGVLMTGVIVTPMDVVKTRVQAAQAEAVSRHAAASSLG---------SGGGGGCYSEPCDKCRQQGRPYTTSARAASSSSMAVAGAGAVRQRPPALPSGTIAALNHIARWEGPRGLYRGLDISLVMAIPATVIYYTVYDDFLSRLE-----KAGAGKLLAPSVAGSTARVLATICMAPLELVRTRVQSEKVVEEVIVGAARGGXXXXXXXXGAFARLPLVSVGRALATVFREEGAAALWRGVGTTMWRDVPFSMVYWLGYENLKAGLGCGRGKRREGVGGEGGRTQSPAEERGSADFLLRSFTAGAMSGGVASLLTHPFDVVKTQQQVVLKGFDTDGGCEHRPPPPKRKPPGTFDVMRSIVDSRGPAGLFTGALARVGKVAPACAIMMFSYEAGKRFFGQRNA 1467
ITP QRM+ +C G L T VTP+DVVK R+QA Q E V G +G G G + P + +G+ T G+ R P GT+ A IAR EG L+ GL +LVMA+PATVIY+T+YD +L G + P+++G+TARV + ++PLE+VRT++QS+K L +G+A+ ++ + G +L+ G+G T+ RDVPFS +YW YE LK G +RE SF AGA++G +A+++T PFDV+KT +Q+ L + G R+P T+ ++ ++ SRG LFTG + R+ KVAPACAIM+ +YE GK FF Q+NA
Sbjct: 13 ITPAQRMICSCTGALATSFFVTPLDVVKIRLQAQQKEFVKNKCFLYCNGLMEHTCYCLNGNGNGQQAVP----QNRGQASTF-------------GSSRYWYRRPGDFHGTLDAFVKIARNEGIGSLWSGLPPTLVMAVPATVIYFTIYDQLKDQLNLWLKTSPGHQPVYVPAISGATARVFSVSVISPLEMVRTKMQSKK--------------------------LSYREIGQAVKSLIQARGFTSLYTGLGPTLLRDVPFSCIYWCNYEGLKQYFG-----QRE-------------------PTFHFSFIAGAVAGTIAAVITLPFDVIKTHKQIELGEMELLAG---------RRPSSTYTLLTNLYRSRGLHALFTGIVPRIIKVAPACAIMISTYEIGKNFFRQKNA 350
BLAST of mRNA_D-herbacea_F_contig110.898.1 vs. uniprot
Match: UPI0003568407 (solute carrier family 25 member 40 n=1 Tax=Tetranychus urticae TaxID=32264 RepID=UPI0003568407) HSP 1 Score: 192 bits (487), Expect = 1.670e-50 Identity = 141/411 (34.31%), Postives = 200/411 (48.66%), Query Frame = 1
Query: 268 ITPPQRMLSACAGVLMTGVIVTPMDVVKTRVQAAQAEAVSRHAAASSLGSGGGGGCYSEPCDKCRQQGRPYTTSARAASSSSMAVAGAGAVRQRPPALPSGTIAALNHIARWEGPRGLYRGLDISLVMAIPATVIYYTVYDDFLSRL-----EKAGAGKLLAPSVAGSTARVLATICMAPLELVRTRVQSEKVVEEVIVGAARGGXXXXXXXXGAFARLPLVSVGRALATVFREEGAAALWRGVGTTMWRDVPFSMVYWLGYENLKAGLGCGRGKRREGVGGEGGRTQSPAEERGSADFLLRSFTAGAMSGGVASLLTHPFDVVKTQQQV-------VLKGFDTDGGCEHRPPPPKRKPPGTFDVMRSIVDSRGPAGLFTGALARVGKVAPACAIMMFSYEAGKRFFGQRN 1464
ITP Q+M S+C G ++T +IVTP+DVVK R+QA + E + C C G S + S + GA +GT+ + HIAR EG L+ GL +L+MAIP+TVIY+T+YD +++ + L P AG ARV+A + ++PLELVRT++QSEK L +GRA+ ++ ++EG AL+RG+ T+ RDVPFS +YW GYE LK L C T P ++SF G ++G +A+++T PFDVVKT +Q+ V KG T ++ P T +++ + RG GLF G R+ KVAPACAIM+ +YE GK FF N
Sbjct: 11 ITPCQQMASSCTGAIITSLIVTPLDVVKIRIQAREKEFIRNKCFLY---------CNGLMDHICTCNGGNDPASMKMTHSERVKWFNRGAPF-------TGTLDGIVHIARNEGLTSLWSGLPPTLIMAIPSTVIYFTIYDQLRAKINLWNGKSLSEQPLWVPMTAGGCARVIAAVTISPLELVRTKMQSEK--------------------------LSYFDIGRAVKSLIQQEGILALYRGLVPTILRDVPFSAIYWAGYEGLKRRLNC---------------TIEPT--------FIQSFICGGIAGSLAAIITLPFDVVKTHRQIEIGQALIVAKGAQT-----------RKNPKSTVSIIKHLYFQRGLKGLFAGLSPRLIKVAPACAIMISTYEWGKSFFRLYN 345
BLAST of mRNA_D-herbacea_F_contig110.898.1 vs. uniprot
Match: UPI001CF632FA (solute carrier family 25 member 40 n=2 Tax=Thunnus TaxID=8234 RepID=UPI001CF632FA) HSP 1 Score: 191 bits (484), Expect = 3.630e-50 Identity = 147/415 (35.42%), Postives = 196/415 (47.23%), Query Frame = 1
Query: 229 LSEEIAAAPVPMEITPPQRMLSACAGVLMTGVIVTPMDVVKTRVQAAQAEAVSRHAAASSLGSGGGGGCYSEPCDKCRQQGRPYTTSARAASSSSMAVAGAGAVRQRPPALPSGTIAALNHIARWEGPRGLYRGLDISLVMAIPATVIYYTVYDDFLSRLE-KAGAGKLLAPSVAGSTARVLATICMAPLELVRTRVQSEKVVEEVIVGAARGGXXXXXXXXGAFARLPLVSVGRALATVFREEGAAALWRGVGTTMWRDVPFSMVYWLGYENLKAGLGCGRGKRREGVGGEGGRTQSPAEERGSADFLLRSFTAGAMSGGVASLLTHPFDVVKTQQQVVLKGFDTDGGCEHRPPPPKRKPPGTFDVMRSIVDSRGPAGLFTGALARVGKVAPACAIMMFSYEAGKRFFGQRNAE 1470
+S + A PV +ITP QRM ++C G ++T ++VTP+DVVK R+QA + P K G+ + + G + P SGT+ A I R EG + L+ GL +LVMA+PATVIY+T YD + + K G +AP +AG+ ARV A ++PLEL+RT++QS+K+ + R EG +LWR +G T+ RDVPFS +YW YE K+ L C R RE L SF +GA SG +AS++T PFDVVKT++QV L + T VMR IV G GLF G L RV KVAPACAIM+ SYE GK FF + N E
Sbjct: 1 MSGQSRAPPVSDDITPLQRMAASCTGAILTSLLVTPLDVVKIRLQAQK-----------------------NPFPK----GKCFVYCNGLMDHICVCENGNSKAWYKAPGHFSGTLDAFIKIVRNEGIKALWSGLPPTLVMAVPATVIYFTCYDQLCAAVRVKMGDHAQMAPLLAGAVARVGAATVISPLELMRTKLQSQKLSYRELTNCVR--------------------------LAVETEGWRSLWRALGPTLLRDVPFSAMYWYNYERSKSWL-CERYNTRE-------------------PTLAISFISGAASGTIASIVTLPFDVVKTRRQVELGELQAMNLSS-------KASSSTISVMRKIVAQHGFGGLFAGFLPRVVKVAPACAIMISSYELGKAFFRKHNQE 335
BLAST of mRNA_D-herbacea_F_contig110.898.1 vs. uniprot
Match: UPI00081135B7 (solute carrier family 25 member 40-like n=1 Tax=Rhagoletis zephyria TaxID=28612 RepID=UPI00081135B7) HSP 1 Score: 191 bits (484), Expect = 3.720e-50 Identity = 147/415 (35.42%), Postives = 201/415 (48.43%), Query Frame = 1
Query: 268 ITPPQRMLSACAGVLMTGVIVTPMDVVKTRVQAAQAEAVSRHAAASSLGSGGGGGCYSEPCDKCRQQGRPYTTSARAASSSSMAVAGAGAVRQRPPALPSGTIAALNHIARWEGPRGLYRGLDISLVMAIPATVIYYTVYDDFLSRLEKAGAG-----KLLAPSVAGSTARVLATICMAPLELVRTRVQSEKVVEEVIVGAARGGXXXXXXXXGAFARLPLVSVGRALATVFREEGAAALWRGVGTTMWRDVPFSMVYWLGYENLKAGLGCGRGKRREGVGGEGGRTQSPAEERGSADFLLRSFTAGAMSGGVASLLTHPFDVVKTQQQVVLKGFDTDGGCEHRPPPPKRKPPGTFDVMRSIVDSRGPAGLFTGALARVGKVAPACAIMMFSYEAGKRFFGQRNAEAAASSAAAA 1497
ITP Q+M+++C+G L+T + VTP+DVVK R+QA Q + + G C Y + A + R PA GT+ A I + EG L+ GL +LVMA+PATV+Y+TVYD + L+K + P VAG TAR A ++PLE++RT++QS R +G+A+ + + EG +LW+G+ T+ RDVPFS +YW YEN K E+ + F SF AGA SG VA+++T PFDVVKT +Q+ L + + PPPK+ DVM +I RG +GLFTG + RV KVAPACAIM+ +YEAGK FF N AA AAA
Sbjct: 11 ITPLQQMVASCSGALLTSLFVTPLDVVKIRLQAQQKDFMKNKCFVYC------NGLMDHVC---------YCYNGHAKD-----------LWYRRPAYFEGTLDAFVKITKTEGITSLWSGLPPTLVMALPATVLYFTVYDQLRNSLKKKFKNDDESLQFWIPVVAGGTARTFAATLISPLEMIRTKMQSR--------------------------RFSYSEIGQAVKKMVKNEGFFSLWKGLNATLLRDVPFSCLYWANYENFKRIF-----------------------EQPNPTFGF-SFFAGACSGTVAAVVTLPFDVVKTHRQIELGEIEV---MKDNKPPPKK----ITDVMMNIYKQRGASGLFTGIVPRVVKVAPACAIMISTYEAGKAFFRGYNEAAAFPVVAAA 342
BLAST of mRNA_D-herbacea_F_contig110.898.1 vs. uniprot
Match: A0A443SUB8_9ACAR (Solute carrier family 25 member 40-like protein (Fragment) n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443SUB8_9ACAR) HSP 1 Score: 191 bits (484), Expect = 5.250e-50 Identity = 144/412 (34.95%), Postives = 201/412 (48.79%), Query Frame = 1
Query: 268 ITPPQRMLSACAGVLMTGVIVTPMDVVKTRVQAAQAEAVSRHAAASSLG-------SGGGGGCYSEPCDKCRQQGRPYTTSARAASSSSMAVAGAGAVRQ--RPPALPSGTIAALNHIARWEGPRGLYRGLDISLVMAIPATVIYYTVYDDFLSRLEK---AGAGKLLAPSVAGSTARVLATICMAPLELVRTRVQSEKVVEEVIVGAARGGXXXXXXXXGAFARLPLVSVGRALATVFREEGAAALWRGVGTTMWRDVPFSMVYWLGYENLKAGLGCGRGKRREGVGGEGGRTQSPAEERGSADFLLRSFTAGAMSGGVASLLTHPFDVVKTQQQVVL-KGFDTDGGCEHRPPPPKRKPPGTFDVMRSIVDSRGPAGLFTGALARVGKVAPACAIMMFSYEAGKRFFGQRN 1464
ITP Q+M+S+C G + T +IVTP+DVVK R+QA Q E + G G G +P D VR+ R P GTI + IA++EG L+ GL +LVMA+PATV+Y+T+YD +L K + P VAG++ARV A ++PLE++RT++QS K L + VG A+ + EG ALW+G+G T+ RDVPFS +YW+GYE+ K Q E+ S F SF AGA+SG +A+++T PFDVVKT +Q+ L + D R T ++++I RG +GLF G R+ KVAPACAIM+ +YE GK+FF + N
Sbjct: 28 ITPLQQMMSSCTGAVATSIIVTPLDVVKIRIQAQQKEFLRNKCFLYCNGLMEHICYCNGNGNGKGQPTDSIY-------------------------VRKWFRRPTHFRGTIDGIYKIAKYEGITSLWSGLPPTLVMAVPATVVYFTIYDQLRVKLRKFMHLNYQPVWLPMVAGASARVFAATLISPLEMIRTKMQSTK--------------------------LSYLEVGAAVKAMVNVEGKLALWKGLGPTLLRDVPFSAIYWVGYESFK---------------------QQFNEQEPSFRF---SFIAGAISGTIAAIITLPFDVVKTHRQIELGENMFRDSNKSTR----------TTALIKTIYAQRGISGLFAGLSPRIVKVAPACAIMISTYEFGKKFFRRMN 354
BLAST of mRNA_D-herbacea_F_contig110.898.1 vs. uniprot
Match: A0A7J5ZZN4_AMEME (Uncharacterized protein n=1 Tax=Ameiurus melas TaxID=219545 RepID=A0A7J5ZZN4_AMEME) HSP 1 Score: 191 bits (485), Expect = 5.670e-50 Identity = 145/400 (36.25%), Postives = 199/400 (49.75%), Query Frame = 1
Query: 268 ITPPQRMLSACAGVLMTGVIVTPMDVVKTRVQAAQAEAVSRHAAASSLGSGGGGGCYSEPCDKCRQQGRPYTTSARAASSSSMAVAGAGAVRQRPPALPSGTIAALNHIARWEGPRGLYRGLDISLVMAIPATVIYYTVYDDFLSRLE-KAGAGKLLAPSVAGSTARVLATICMAPLELVRTRVQSEKVVEEVIVGAARGGXXXXXXXXGAFARLPLVSVGRALATVFREEGAAALWRGVGTTMWRDVPFSMVYWLGYENLKAGLGCGRGKRREGVGGEGGRTQSPAEERGSADFLLRSFTAGAMSGGVASLLTHPFDVVKTQQQVVLKGFDTDGGCEHRPPPPKRKPPGTFDVMRSIVDSRGPAGLFTGALARVGKVAPACAIMMFSYEAGKRFFGQRN 1464
ITP Q+M+S+C+G L+T + VTP+DV+K R+QA S P K G+ + + G G +P SGT+ A I R EG + L+ GL +LVMA+PATVIY+T YD + L + G LAP +AGS ARV + ++PLEL+RT++QSE R + + + + EG ALWRG+G T+ RDVPFS +YW YE KA L C K E + +FT+GA+SG +AS++T PFDVVKT++QV L G + R P+ T+ VM+ IV G GLF G + R+ KVAPACAIM+ +YE GK FF ++N
Sbjct: 42 ITPLQQMVSSCSGALLTSLFVTPLDVIKIRLQA-----------------------QSTPLSK----GKCFLYCNGLMDHICVCENGNGKAWYKPQVRFSGTLDAFIRIVRMEGIKSLWSGLPPTLVMAVPATVIYFTSYDQICASLRLRMGEKADLAPLLAGSIARVGSATLISPLELIRTKLQSE--------------------------RQSYIELSGVIRSAVHNEGWLALWRGLGPTLLRDVPFSAMYWYNYEKGKAWL-CRYNKTTE-------------------PTVSIAFTSGAVSGSIASIVTLPFDVVKTRRQVEL------GELQARKLLPQASS-STYKVMKRIVAESGVKGLFAGFMPRLIKVAPACAIMISTYEFGKAFFRKQN 361
BLAST of mRNA_D-herbacea_F_contig110.898.1 vs. uniprot
Match: A0A6A4VRE7_AMPAM (Solute carrier family 25 member 40 n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4VRE7_AMPAM) HSP 1 Score: 190 bits (483), Expect = 1.030e-49 Identity = 154/425 (36.24%), Postives = 201/425 (47.29%), Query Frame = 1
Query: 280 QRMLSACAGVLMTGVIVTPMDVVKTRVQAAQ-AEAVSR----------HAAASSLGSGGGGGCYSEPCDKCRQQGRPYTTSARAASSSSMAVAGAGAVRQRPPALPSGTIAALNHIARWEGPRGLYRGLDISLVMAIPATVIYYTVYDDFLSRLEK-----AGAGKLLAPSVAGSTARVLATICMAPLELVRTRVQSEKVVEEVIVGAARGGXXXXXXXXGAFARLPLVSVGRALATVFREEGAAALWRGVGTTMWRDVPFSMVYWLGYENLKAGLGCGRGKRREGVGGEGGRTQSPAEERGSADFLLRSFTAGAMSGGVASLLTHPFDVVKTQQQVV----LKGFDTDGGCEHRPPPPKRKPPGTFDVMRSIVDSRGPAGLFTGALARVGKVAPACAIMMFSYEAGKRFFGQRNAEAAASSAAA 1494
Q+M ++C G ++T V +TP+DVVK R+QA Q A + R H G GG P CR P TS R+ P + +G++ A IAR EG R L+ GL +LV AIP+TV+Y+ YD L A P VAG+ ARV A+ +APLELVRTR+Q++ R+ +G A+ + REEG LW+G+ T+ RDVPFS VYW GYE LK G Q+P+ L SF AG+ +G VA+++T PFDVVKT Q+ L D+ GG RPP +P G +R I G GLF G + RV KVAPACAIM+ +YE GK FF +RN A AA
Sbjct: 19 QQMAASCTGAVLTSVTMTPLDVVKIRMQAQQRARSAQRCFLYCNGLMDHLCICVNGQSGGAASGCGPAAACRAA-EPAATSW---------------YRRPCPPVYTGSVDAALQIARAEGVRSLWSGLSPTLVSAIPSTVVYFATYDQSRQYLRARFGSAASPQPAWVPMVAGAAARVWASTLVAPLELVRTRMQAQ--------------------------RMRYTELGGAVRVLLREEGVRGLWKGLTPTLIRDVPFSAVYWAGYEGLKLAAG----------------QQTPS--------ALFSFAAGSAAGTVAAVVTLPFDVVKTHWQIEFGQRLGAPDSGGG---RPP----RPGGVLASLREIHGRAGVPGLFAGLVPRVVKVAPACAIMITTYEGGKAFFLRRNERRAREREAA 370
BLAST of mRNA_D-herbacea_F_contig110.898.1 vs. uniprot
Match: A0A139AME4_GONPJ (Mitochondrial carrier n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AME4_GONPJ) HSP 1 Score: 190 bits (482), Expect = 3.130e-49 Identity = 154/445 (34.61%), Postives = 209/445 (46.97%), Query Frame = 1
Query: 202 GVWWMRFQCLSEEIAAAPVPMEITPPQRMLSACAGVLMTGVIVTPMDVVKTRVQAAQA-------------EAVSRHAAASSLGSGGGGGCYSEPC---DKCRQQGRP--YTTSARAASSSSMAVAGAGAVRQRPPALPSGTIAALNHIARWEGPRGLYRGLDISLVMAIPATVIYYTVY----DDFLSRLEKAGAGKLLAPSVAGSTARVLATICMAPLELVRTRVQSEKVVEEVIVGAARGGXXXXXXXXGAFARLPLVSVGRALATVFREEGAAALWRGVGTTMWRDVPFSMVYWLGYENLKAGLGCGRGKRREGVGGEGGRTQSPAEERGSADFLLRSFTAGAMSGGVASLLTHPFDVVKTQQQVVLKGFDTDGGCEHRPPPPKRKPPGTFDVMRSIVDSRGPAGLFTGALARVGKVAPACAIMMFSYEAGKRFFGQRNAE 1470
G W SE + P E TP QR++SA G +T ++VTP DVVK R+QA E ++ +G C +P + R P T A+ ++ AG+ A+ +GT + IAR+EG L+ GL +LVM +PATV+YY Y D L R + AP AG AR +A ++P+EL+RTR+QS E+ +G + + R +GA++LWRG+ T+WRDVPFS +YW GYE L+ L KRR PA + F SF +GA +G VA+ +T PFDV KT++Q+ TD H ++MR+IV G GL TG AR+ KVAPACAIM+ SYEAGK FF QRNAE
Sbjct: 17 GARWSEVDSPSEPLPQ-PQFAEPTPSQRVVSALGGAFLTSLVVTPFDVVKNRLQAGSTVVGSGGTPVRVPYEPITECCREVFVGIHDPVQCSHQPAIPQSRLRVGNFPRILMTGQAVAAGCALEAGAAGSTE----AVINGTWDGMIKIARYEGLSSLWSGLSPTLVMQVPATVVYYVGYESLRDTLLLRFHNYPNIEFYAPLFAGIMARTVAAFAISPIELIRTRMQSVAGNEKQFNNVLQG-----------------------VRNMMRAQGASSLWRGMAATLWRDVPFSGIYWSGYETLRDRL-----KRRY-----------PAWNETAVGFYSISFISGAAAGMVAATVTTPFDVAKTRKQI------TDSHGAHMK---------MMNLMRTIVQDEGWRGLTTGLTARIAKVAPACAIMISSYEAGKFFFRQRNAE 402 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig110.898.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig110.898.1 >prot_D-herbacea_F_contig110.898.1 ID=prot_D-herbacea_F_contig110.898.1|Name=mRNA_D-herbacea_F_contig110.898.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=435bp MRFQCLSEEIAAAPVPMEITPPQRMLSACAGVLMTGVIVTPMDVVKTRVQback to top mRNA from alignment at D-herbacea_F_contig110:288151..293296+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig110.898.1 ID=mRNA_D-herbacea_F_contig110.898.1|Name=mRNA_D-herbacea_F_contig110.898.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=5146bp|location=Sequence derived from alignment at D-herbacea_F_contig110:288151..293296+ (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig110:288151..293296+ >mRNA_D-herbacea_F_contig110.898.1 ID=mRNA_D-herbacea_F_contig110.898.1|Name=mRNA_D-herbacea_F_contig110.898.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2610bp|location=Sequence derived from alignment at D-herbacea_F_contig110:288151..293296+ (Desmarestia herbacea DmunF female)back to top |