mRNA_D-herbacea_F_contig11.873.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig11.873.1 vs. uniprot
Match: D8LE98_ECTSI (RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE98_ECTSI) HSP 1 Score: 952 bits (2460), Expect = 0.000e+0 Identity = 533/806 (66.13%), Postives = 610/806 (75.68%), Query Frame = 3
Query: 237 RGTTTLAILGLLAGFVNVDAFRLSPVRGAGLPSGLACTQQTSSVSRRGNASSAWRTAHRGLSMS-TLSALDDF-SATEEVDE-KDSQSNVMDELDAILGDAKTDSXXXXXXXXXXXXXXXXXXXXXXF----ASAASRTTKPAAKADSDVVDLNLDDLLGP-----PPQRFQGGGRSADGG------------------RDDWKEPSGSSYGGGGXXXYGGEFGAARGKFGADPEAAHQKAVRGDRLITQVEVSDDGACPVAEKDIDAQTVASLAKRGIDTFTPVQAITYDHILSGRDIIGKSRTGTGKTIAFGLPVIQHLARFAEDHKTRTSMRGRAPRFLVVCPTRELARQVYEELATLSRPFGLRAEVFHGGASYGPQEGALRQGLDILVATPGRVIDHLQRGNLNLGEVQHAVLDEADEMLNMGFADDIESIFSYVNVRECQVLLFSATVPSWVRNIASKYTDNPLTVDAVGKNDNKLATTVKHVAIEVSARHRATMLEDIITVYGKGSHAIVFTQTKRECDELAAGQAFKTLTSQVLHGDISQNQRDLTINQFRKGQFQVLVATDVAARGIDVSDIDLVVQYRPPRDSDTYVHRSGRTXXXXXXXVAVTLYADNEMNDIRRIEQGVGQGFKFERGPVPSAEQVMSLAGTVAREQIKAVSEEMVGYFMESAQELLAEGDSEDKEMLLARCLAAISRKTDVTRRSILSGEPDKVTVQMNAPRALTTGDVMFAVGKLARAAGFEAMVGKISVAKDPTTAVFDMSAKAAEQLVAFSKEQNLESIVFVLCTELPALQSINGMGRGG 2564
R +T LA+LGLLAGFVNVDAF L P G S +T+ S A + WR H GLSMS T SA+++ +AT EVD+ K +++VMDELDAILGD + DS SA T AA +S + DL+LDDLLGP PPQR+ GGG + GG + W P Y GEFGAA GK+G K ++GD++++ VEV ++GACPV EKD+D +TVA+L RGI+ FTPVQAITYDHILSGRDIIGKSRTGTGKTIAFGLPVIQHL RFAEDH+ RT RGR+PRFLVVCPTRELARQVY EL TL FGL+A+VFHGGA+YGPQ +L GLDILVATPGR++DHLQRG L+L +V+HAVLDEADEMLNMGFADDIE+IFSYV+V+ECQVLLFSATVPSWVRNIA+KYT NPLTVDAVGK+ NKLATTVKH++IEVS+RHR++MLEDIIT YGKGSHAIVFT +K ECDELA GQ FKTLTSQVLHGDISQ+QRD TI FR FQVLVATDVAARGIDVSDIDLVVQYRPPRD D+YVHRSGRT VAVTLYA+NE+ DIR+IEQGVGQGF+FERG VPSAEQVMSLAGTVAREQIK VS++MV +F ESAQELLAE +SEDKE+LLA+CLAAI+RKT VTRRS+L+GEPDKVTVQM APR LT+GDVMFAVGKL RAAGFE MVG+I++AKDPTTAVFDMS +AA+QLV FSKEQNLESI F +C LP LQ G GG
Sbjct: 4 RSSTALAVLGLLAGFVNVDAFSLIPAA-PGAVSSSVTRAKTAVASLEPPARNTWRARH-GLSMSSTSSAVENAGAATGEVDDSKPPRASVMDELDAILGDVQQDSGTKPASGGGMGAAAPLDQDLDSLLGSATSAPPATATVAAPKNSGLDDLDLDDLLGPGANSAPPQRYSGGGTAEGGGSFPAAGRGPPVGGASSDGQQAWGAPGQQQQ----RMSYSGEFGAASGKYGDTAARTASKELKGDQMVSLVEVGEEGACPVEEKDVDPKTVAALKARGIEKFTPVQAITYDHILSGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHQQRTYQRGRSPRFLVVCPTRELARQVYGELETLGSTFGLKADVFHGGAAYGPQMRSLSDGLDILVATPGRIMDHLQRGALDLSDVRHAVLDEADEMLNMGFADDIETIFSYVDVKECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKHVNKLATTVKHLSIEVSSRHRSSMLEDIITYYGKGSHAIVFTNSKAECDELADGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDDMVDFFRESAQELLAEEESEDKELLLAKCLAAIARKTHVTRRSMLTGEPDKVTVQMVAPRQLTSGDVMFAVGKLGRAAGFEPMVGRIAIAKDPTTAVFDMSTEAADQLVKFSKEQNLESIEFKMCPVLPVLQEAPGGRFGG 803
BLAST of mRNA_D-herbacea_F_contig11.873.1 vs. uniprot
Match: A0A836CKS6_9STRA (RNA helicase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKS6_9STRA) HSP 1 Score: 659 bits (1700), Expect = 5.300e-219 Identity = 345/548 (62.96%), Postives = 422/548 (77.01%), Query Frame = 3
Query: 930 AEKDIDAQTVASLAKRGIDTFTPVQAITYDHILSGRDIIGKSRTGTGKTIAFGLPVIQHLARFAEDHKTRTSMRGRAPRFLVVCPTRELARQVYEELATLSRPFGLRAEVFHGGASYGPQEGALRQGLDILVATPGRVIDHLQRGNLNLGEVQHAVLDEADEMLNMGFADDIESIFSYVNVRECQVLLFSATVPSWVRNIASKYTDNPLTVDAVGKNDNKLATTVKHVAIEVSARHRATMLEDIITVYGKGSHAIVFTQTKRECDELAAGQAFKTLTSQVLHGDISQNQRDLTINQFRKGQFQVLVATDVAARGIDVSDIDLVVQYRPPRDSDTYVHRSGRTXXXXXXXVAVTLYADNEMNDIRRIEQGVGQGFKFERGPVPSAEQVMSLAGTVAREQIKAVSEEMVGYFMESAQELLAEGDSE----DKEMLLARCLAAISRKTDVTRRSILSGEPDKVTVQMNAPRALTTGDVMFAVGKLARAAGFEAM-VGKISVAKDPTTAVFDMSAKAAEQLVAFSKEQNLESIVFVLCTELPALQSINGMGR 2558
A ++ T+ L +GI FTPVQA+TY+HIL+GRD+I KSRTGTGKTIAFGLPVIQHLARFA+D +R+S R AP +V +ELA L++P G+ E F+GGASYGPQE ALR+G+D++V TPGR+IDH+Q+GNL+L E++HAVLDEADEMLNMGFAD IE +F+ VN+ ECQVLLFSATVP WVR I++ Y NPL VDAVG DN+LATTVKH+AIE +R+RA MLED+I VYGKGS AIVFTQTKRECDELAAG AFKTL+SQVLHGDI QNQR++TI QFRKGQFQVLVATDVAARGID+S+IDLVVQYRPP D DTYVHRSGRT VTL+ADNE D+++IE+ +G+GFKFER VPSA QVM +AG VA + + VS ++V +F +A+ELLAE ++ D E LLARCLAAI+RKT++ +RSIL+GEPD TVQM A + +TTGDV FAV KLARA G + +GKI++ KD TAVFDM+ AA L+ + +Q L++I F LCTELP L + GR
Sbjct: 54 AAAEVIQSTIDVLLGKGITHFTPVQAVTYEHILAGRDMIAKSRTGTGKTIAFGLPVIQHLARFADDADSRSSKRYAAPLMRTYHLATNTYSKVADELAQLAQPHGMSVECFYGGASYGPQESALRRGVDVVVGTPGRLIDHVQKGNLDLSELKHAVLDEADEMLNMGFADAIEELFARVNIPECQVLLFSATVPDWVRRISAAYLKNPLQVDAVGTTDNRLATTVKHLAIETPSRNRAHMLEDVIAVYGKGSRAIVFTQTKRECDELAAGNAFKTLSSQVLHGDIGQNQREVTIGQFRKGQFQVLVATDVAARGIDISEIDLVVQYRPPTDPDTYVHRSGRTGRAGRLGTCVTLFADNERRDVQKIEKAIGKGFKFERAAVPSATQVMEVAGKVALKALDTVSADVVPFFTPAARELLAESQADGAELDTEQLLARCLAAIARKTEIQQRSILTGEPDMATVQMVAHQPMTTGDVTFAVNKLARAGGGPSPNIGKIAIGKDAHTAVFDMTQAAAAALIDVANDQELKAIKFTLCTELPELSTQEYGGR 601
BLAST of mRNA_D-herbacea_F_contig11.873.1 vs. uniprot
Match: A0A835ZP19_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZP19_9STRA) HSP 1 Score: 541 bits (1395), Expect = 6.350e-172 Identity = 289/486 (59.47%), Postives = 351/486 (72.22%), Query Frame = 3
Query: 924 PVAEKDIDAQTVASLAKRGIDTFTPVQAITYDHILSGRDIIGKSRTGTGKTIAFGLPVIQHLARFAEDHKTRTSMRGRAPRFLVVCPTRELARQVYEELATLSRPFGLRAEVFHGGASYGPQEGALRQGLDILVATPGRVIDHLQRGNLNLGEVQHAVLDEADEMLNMGFADDIESIFSYVNVRECQVLLFSATVPSWVRNIASKYTDNPLTVDAVGKNDNKLATTVKHVAIEVSARHRATMLEDIITVYGKGSHAIVFTQTKRECDELAAGQAFKTLTSQVLHGDISQNQRDLTINQFRKGQFQVLVATDVAARGIDVSDIDLVVQYRPPRDSDTYVHRSGRTXXXXXXXVAVTLYADNEMNDIRRIEQGVGQGFKFERGPVPSAEQVMSLAGTVAREQIKAVSEEMVGYFMESAQELLAEGDSE----DKEMLLARCLAAISRKTDVTRRSILSGEPDKVTVQMNAPRALTTGDVMFAVGKLAR 2369
PV KD+D +TV L +GI+ FTPVQ++TY+HIL GRDI+ +SRTGTGKTIAFGLPVIQHL RFA+D TRT+ RGR PRFLVVCPTRELA+QV +EL+ L+RP L+ E F+GG+SYGPQE ALR+GLDI+V TPGR+IDH+ +GNL+L E++HAVLDEADEMLNMGFADDIE IFS V++ CQVLLFSATVP WV+ I++ Y NPL+ A+ K N+ + T +A+ QVLHGDI QNQR++TI QFRK QFQVLVATDVAARGID+S+IDLVVQYRPP D DTYVHRSGRT V VTLYADNE D+++IE+ VG+GFKFER PVPS QVM +AGTVA + + AVSEE+V +F +A+EL+AE + D E LLARCLAAI+RKT++ +RS+L+GEPD TVQ+ A R LT GDVMFAV KLAR
Sbjct: 148 PVDSKDVDDKTVEILRSKGIEFFTPVQSVTYEHILGGRDIVARSRTGTGKTIAFGLPVIQHLGRFADDADTRTNTRGRRPRFLVVCPTRELAKQVADELSQLARPHNLQVECFYGGSSYGPQESALRRGLDIVVGTPGRLIDHINKGNLDLSELKHAVLDEADEMLNMGFADDIEEIFSKVDIPACQVLLFSATVPDWVKRISAAYLKNPLSFIALLKTHNRPSCT----------------------------YAV-----------------------QVLHGDIGQNQREVTIGQFRKSQFQVLVATDVAARGIDISEIDLVVQYRPPTDPDTYVHRSGRTGRAGRSGVCVTLYADNERRDMQKIERAVGKGFKFERAPVPSPAQVMEVAGTVALKSLTAVSEEVVPFFSSAAKELIAESTASEGGLDTEKLLARCLAAIARKTELQQRSMLTGEPDMATVQLTAHRPLTAGDVMFAVDKLAR 582
BLAST of mRNA_D-herbacea_F_contig11.873.1 vs. uniprot
Match: A0A7S2DBW6_9STRA (RNA helicase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DBW6_9STRA) HSP 1 Score: 496 bits (1276), Expect = 4.790e-155 Identity = 269/559 (48.12%), Postives = 369/559 (66.01%), Query Frame = 3
Query: 942 IDAQTVASLAKRGIDTFTPVQAITYDHILSGRDIIGKSRTGTGKTIAFGLPVIQHLARFAEDHKTRTSMRGRAPRFLVVCPTRELARQVYEELATLSRPFGLRAEVFHGGASYGPQEGALRQGLDILVATPGRVIDHLQRGNLNLGEVQHAVLDEADEMLNMGFADDIESIFSYVNVRECQVLLFSATVPSWVRNIASKYTDNPLTVDAVGKNDNKLATTVKHVAIEVSARH--RATMLEDIITVY-GKGSHAIVFTQTKRECDELAAGQAFKTLTSQVLHGDISQNQRDLTINQFRKGQFQVLVATDVAARGIDVSDIDLVVQYRPPRDSDTYVHRSGRTXXXXXXXVAVTLYADNEMNDIRRIEQGVGQGFKFERGPVPSAEQVMSLAGTVAREQIKAVSEEMVGYFMESAQELLAE-------GDSEDKEM--------LLARCLAAISRKTDVTRRSILSGEPDKVTVQMNAPRALTTGDVMFAVGKLARAAGFEAMVGKISVAKDPTTAVFDMSAKAAEQLVAFSKEQNLESIVFVLCTELPALQSINGMGRGG 2564
+ +TVA L+K+G FT +Q+ + + GRD+I +SRTGTGKTIAFGLP+++ +A + RGRAPR LV+ PTRELARQV EL TL R + VFHGGA YGPQEG+LR G+DILVATPGR++DHL RG L L +V+H VLDEADEML+MGF+ DIE + S+V++ Q LLFSAT PSW++ I+++Y +PL +DAVG N+ + ATTV H A+ V R ++LED+ITV G S IVFTQTKRE DEL++G AF+ L++ VLHGD+SQ QRD+T+ QF+ G+F+VLVATDVAARGID+S++D+VVQ P++SD+YVHR+GRT V++ LY + + R+E +G GFKF++ P+ V+S A A + V E ++ Y + A +L E ED+ + L+AR LA + KT+V S+++GE T+ + APRAL DV+FAV KLAR FE +GKI + KDP+ AVFD+ + A + + F +EQ+L+ F +C+ELP LQ + GG
Sbjct: 149 VHPRTVADLSKKGFTHFTDIQSQAFLPVFEGRDVIARSRTGTGKTIAFGLPIVEAIAASGRELD-----RGRAPRLLVMAPTRELARQVAAELGTLGRAYRFSVAVFHGGAPYGPQEGSLRNGIDILVATPGRILDHLNRGGLKLDDVRHVVLDEADEMLDMGFSKDIEEVLSFVDMDAAQTLLFSATTPSWIQRISAQYMTDPLRLDAVGANEQRTATTVAHKAMLVPDNDEVRMSLLEDVITVEAGVESKTIVFTQTKREADELSSGSAFRVLSAGVLHGDLSQKQRDVTLAQFKSGKFKVLVATDVAARGIDISNVDVVVQTSMPQNSDSYVHRAGRTGRAGKKGVSIVLYTQRQRRGVSRLEHEIGHGFKFQKHTAPTPSTVISAAADNAVAALPVVDETVLSYLKDPASKLYEEIIEKAQSNTPEDEAVDVADATSDLIARLLALATGKTEVKSWSLMTGELGITTLMVKAPRALKQSDVVFAVSKLARHGEFEINIGKIQLGKDPSEAVFDLPSSQALKFMQFVEEQDLQKFAFEVCSELPELQFVADRYGGG 702
BLAST of mRNA_D-herbacea_F_contig11.873.1 vs. uniprot
Match: A0A7S2V2B9_9STRA (RNA helicase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2B9_9STRA) HSP 1 Score: 494 bits (1271), Expect = 7.790e-154 Identity = 276/570 (48.42%), Postives = 375/570 (65.79%), Query Frame = 3
Query: 849 EAAHQKAVRGDRLITQVEVSDDGACPVAEKDIDAQTVASLAKRGIDTFTPVQAITYDHILSGRDIIGKSRTGTGKTIAFGLPVIQHLARFAEDHKTRTSMRGRAPRFLVVCPTRELARQVYEELATLSRPFGLRAEVFHGGASYGPQEGALRQGLDILVATPGRVIDHLQRGNLNLGEVQHAVLDEADEMLNMGFADDIESIFSYVNVRECQVLLFSATVPSWVRNIASKYTDNPLTVDAVGKNDNKLATTVKHVAIEVSARHRATMLEDIITVYGKGSHAIVFTQTKRECDELAAGQAFKTLTSQVLHGDISQNQRDLTINQFRKGQFQVLVATDVAARGIDVSDIDLVVQYRPPRDSDTYVHRSGRTXXXXXXXVAVTLYADNEMNDIRRIEQGVGQGFKFERGPVPSAEQVMSLAGTVAREQIKAVSEEMVGYFMESAQELLAEGDSEDKEM------LLARCLAAISRKTDVTRRSILSGEPDKVTVQMNAPRA-LTTGDVMFAVGKLA-RAAGFEAMVGKISVAKDPTTAVFDMSAKAAEQLVAFSKEQNLESIVFVLCTELPAL 2534
E + K VR ++ + +E VAE +D + +LA +GI FT +Q + IL G+DIIG+SRTGTGKT+AF LP++Q L ++ + T RGR PR L++CPTRELA+QV E+ +S PF L+ F+GG++YGPQ ALR GLDI+V TPGRV+D + RG+L L +QHAVLDEADEMLNMGFA+D+E+IF + QVL+FSAT P WV+ I+S+YTD P+++DAVG + +LATTV HV+IEV +A +LED+I V+GKGS AIVF QTK ECD L AFK++++Q LHGD+SQ RD I QF+ +FQVLVATDVAARG+D+S +DLVVQ PP D+DT+VHRSGRT AV LY+ E I+R+E+ +G F+FE+ P+ +QVM A VA + V+ ++V YF + AQ++ E E +E+ LL++CLAAIS K D+ RSIL+G+PD +TV M R L D F V KL+ R + F ++GKI ++D + VFDM +AA+ LV + F +C +LP L
Sbjct: 178 EVSATKEVRNEQGMLAIE-------GVAE--VDDRIKKTLAAKGITHFTLIQEQSLKPILEGKDIIGRSRTGTGKTVAFTLPLLQKL----DEDPSATRQRGRDPRVLILCPTRELAKQVEAEINDMSTPFRLQTHCFYGGSAYGPQANALRGGLDIVVGTPGRVMDLINRGDLRLQNIQHAVLDEADEMLNMGFAEDVETIFGNFDTDSAQVLMFSATTPDWVKEISSRYTDKPVSIDAVGNSQTRLATTVNHVSIEVDRDLKAGILEDLIAVHGKGSRAIVFAQTKAECDHLTTS-AFKSVSAQPLHGDMSQKLRDTCIKQFKNHKFQVLVATDVAARGLDISGVDLVVQLNPPFDTDTFVHRSGRTGRAGQKGTAVMLYSAQEFGGIKRLERELG--FRFEKSSPPTTQQVMQAASNVAEHSLSEVNPKVVAYFEDKAQQMAEEVMPEGQEVPAELTNLLSKCLAAISGKKDIQERSILTGKPDMMTVMMKTERQQLEARDAFFVVNKLSNRGSDFSNLLGKIETSQDGMSLVFDMDIEAADSLVETATISPFRDFQFSICEKLPPL 731
BLAST of mRNA_D-herbacea_F_contig11.873.1 vs. uniprot
Match: A0A7S3ZWQ0_9STRA (RNA helicase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZWQ0_9STRA) HSP 1 Score: 478 bits (1230), Expect = 6.770e-148 Identity = 283/636 (44.50%), Postives = 378/636 (59.43%), Query Frame = 3
Query: 861 QKAVRGDRLITQVEVSDDGACPVA-EKDIDAQTVASLAKRGIDTFTPVQAITYDHILSGRDIIGKSRTGTGKTIAFGLPVIQHLARFAEDHKTRTSMRGRAPRFLVVCPTRELARQVYEELATLSRPFGLRAEVFHGGASYGPQEGALRQGLDILVATPGRVIDHLQRGNLNLGEVQHAVLDEADEMLNMGFADDIESIFS-------------------------------------YVNVRECQVLLFSATVPSWVRNIASKYTDNPLTVDAVGKNDNKLATTVKHVAIEVSARH--RATMLEDIITV-------------YGKGSHAIVFTQTKRECDELAAGQAFKTLTSQVLHGDISQNQRDLTINQFRKGQFQVLVATDVAARGIDVSDIDLVVQYRPPRDSDTYVHRSGRTXXXXXXXVAVTLYADNEMNDIRRIEQGVGQGFKFERGPVPSAEQVMSLAGTVAREQIKAVSEEMVGYFMESAQELLAEG---DSEDKEMLLARCLAAISRKTDVTRRSILSGEPDKVTVQMNAPRALTTGDVMFAVGKLARAAGFEA--------MVGKISVAKDPTTAVFDMSAKAAEQLVAFSKEQNLESIVFVLCTELPALQ-----SINGMGRG 2561
+ V G+ ++ E D P+A E I + LA+RGI TFT +Q +Y+ + GRD++GKSRTGTGKT+AFGLP+I+ LA + + RGR P LV+ PTRELA+QV++EL L+ G FHGG SYGPQEGALR+G+DILVAT GRVIDH+ RGNL L + H VLDEADEML+MGFADD+E IF R Q LLFSAT P W++ + ++ + + VD VG + ATTV H A+ V + RA++LEDII+V G IVFT TKRECDELA G AF+ L++QVLHGDI Q+QR+ T+ QFR+GQF VLVATDVAARGIDV +DLVVQ+R PRD++ YVHRSGRT AV LY D E D+R +E+ G KF+R PSA +V+ A A + V +++V +F+E+A++L A+ S++ L+ARCLAA++R+ ++ RS+L+GE D+ T+ M+APR L T DV++AV KL + VG + V K+P+ AVFD+ + A++L+AF +EQN F +C LP LQ NG G G
Sbjct: 66 EDVVVGEEVVPDAEPEKD---PMAIEGRISDRQAERLAERGITTFTEIQHRSYEPVFEGRDLLGKSRTGTGKTVAFGLPIIEKLAEMRSNGEYDHKRRGRGPAMLVLTPTRELAKQVHDELKYLADTHGFSTTCFHGGVSYGPQEGALRRGVDILVATVGRVIDHIDRGNLQLNDAYHVVLDEADEMLSMGFADDVERIFGECPAGKAKGMGSGGGAPAPDDAFDLDELLGEEAPPAPVAESRRPQTLLFSATSPGWIKKMTRRFMTDHVFVDVVGDATQQAATTVTHKAVLVPRSNDARASLLEDIISVELSQRQGQVTDEQQNGGGRVIVFTATKRECDELAGGPAFQRLSAQVLHGDIGQSQREATLAQFRRGQFSVLVATDVAARGIDVKGVDLVVQFRTPRDAEGYVHRSGRTGRAGRDGTAVVLYDDREERDVRSLERETG--VKFQRLGPPSAGRVLEAASLDAARALTRVQDDVVPHFLETAKQLCADELAETSDEAASLVARCLAAVARQNELRARSVLTGEADRTTLLMSAPRPLKTSDVVYAVSKLLERVPKQEGATPNDNDRVGAVRVCKEPSQAVFDVRSTTAQRLLAFCEEQNFNKFTFEVCEVLPQLQPQQRRDFNGGGGG 696
BLAST of mRNA_D-herbacea_F_contig11.873.1 vs. uniprot
Match: A0A7S4R924_9STRA (RNA helicase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R924_9STRA) HSP 1 Score: 463 bits (1191), Expect = 1.100e-141 Identity = 270/579 (46.63%), Postives = 361/579 (62.35%), Query Frame = 3
Query: 966 LAKRGIDTFTPVQAITYDHILSGRDIIGKSRTGTGKTIAFGLPVIQHLARFAEDHKTRTSMRGRAPRFLVVCPTRELARQVYEELATLSRPFGLRAEVFHGGASYGPQEGALRQGLDILVATPGRVIDHLQRGNLNLGEVQHAVLDEADEMLNMGFADDIESIFSYV---NVRECQVLLFSATVPSWVRNIASKYTDNPLTVDAVGKNDN-KLATTVKHVAIEVSARHRA--TMLEDIITV----------YGKGSH----------------------------------AIVFTQTKRECDELAAGQAFKTLTSQVLHGDISQNQRDLTINQFRKGQFQVLVATDVAARGIDVSDIDLVVQYRPPRDSDTYVHRSGRTXXXXXXXVAVTLYADNEMNDIRRIEQGVGQGFKFERGPVPSAEQVMSLAGTVAREQIKAVSEEMVGYFMESAQELLAEGDSEDKEMLLARCLAAISRKT-DVTRRSILSGEPDKVTVQM--NAPRALTTGDVMFAVGKLARAAG-------FEAMVGKISVAKDPTTAVFDMSAKAAEQLVAFSKEQNLESIVFVLCTE 2522
L+ +GI FTPVQ + +++GRD+IG+SRTGTGKT+AFGLP I L E + +RGR P +++CPTRELARQV+EE+A ++RP GL + VFHGG SYGPQ ALRQGLDILV TPGRVIDHL RGN++L EV VLDEADEMLNMGFA+D+E I V N ++ Q LLFSAT P WV+ I ++Y + +++D+ + ATTV+H+AI+V H + ++LEDII V +GK IVFT+TKR+ DEL +G FK+LT+Q LHGD+ Q QRD T+ FR G F VLVATDVAARGID++D+DLV+Q+ PPRD DTYVHRSGRT +V L+ N+ DI +IE+ +G GFKFE PS E ++ A + ++V EE +F ++A LL G ED + ++ARCLAAISR++ +V RS+L+GE VTV+M N R ++ GDVMF V KL+R + F++ VGKI + +A+FDM + A++LV FSK+ + VF + E
Sbjct: 115 LSAKGITQFTPVQGEAFAPVVAGRDVIGRSRTGTGKTLAFGLPSITRLTAPDETGQVPPRLRGRKPSMVILCPTRELARQVHEEVAHVARPLGLFSAVFHGGVSYGPQASALRQGLDILVGTPGRVIDHLDRGNIDLSEVDIVVLDEADEMLNMGFAEDVEHILGGVGSANEKKTQFLLFSATTPPWVKEIGNQYQKDVISIDSTSDETGARTATTVRHMAIQVPPGHDSAKSILEDIIAVEISKDIDPHAFGKTKEQEELAAINPIAAXXXXXXXXKNANSAMQQKIFGKTIVFTETKRDADELVSGSIFKSLTAQALHGDVGQKQRDATLAAFRAGAFNVLVATDVAARGIDITDVDLVIQFEPPRDVDTYVHRSGRTGRAGRKGTSVLLFRPNQSRDIVKIERSLGHGFKFELAGPPSIEAALTAAAKTSAIACRSVPEETAKFFTDAAGSLLENG--EDPQEVVARCLAAISRRSSEVQSRSLLTGELGLVTVEMTNNRDRPVSPGDVMFTVSKLSRMSQRGDGNLTFDSDVGKIHSDFETGSAIFDMGVEDAKKLVEFSKDIDAGGAVFSILRE 691
BLAST of mRNA_D-herbacea_F_contig11.873.1 vs. uniprot
Match: A0A1Z5KKE6_FISSO (RNA helicase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KKE6_FISSO) HSP 1 Score: 459 bits (1182), Expect = 1.040e-140 Identity = 287/639 (44.91%), Postives = 375/639 (58.69%), Query Frame = 3
Query: 849 EAAH---QKAVRGDRLITQVEVSDDGACPVA-----EKDIDAQTVASLAKRGIDTFTPVQAITYDHILSGRDIIGKSRTGTGKTIAFGLPVIQHLARFAEDHKTRTSM--RGRAPRFLVVCPTRELARQVYEELATLSRPFGLRAEVFHGGASYGPQEGALRQGLDILVATPGRVIDHLQRGNLNLGEVQHAVLDEADEMLNMGFADDIESIFSYV---NVRECQVLLFSATVPSWVRNIASKYTDNPLTVDAVGKNDNKLATTVKHVAIEV--SARHRATMLEDIITVY------------------------------GKGSH--------AIVFTQTKRECDELAAGQAFKTLTSQVLHGDISQNQRDLTINQFRKGQFQVLVATDVAARGIDVSDIDLVVQYRPPRDSDTYVHRSGRTXXXXXXXVAVTLYADNEMNDIRRIEQGVGQGFKFERGPVPSAEQVMSLAGTVAREQIKAVSEEMVGYFMESAQELLAEGDSEDKEMLLARCLAAISRK-TDVTRRSILSGEPDKVTVQM-NAPRALTTGDVMFAVGKLARAAG------FEAMVGKISVAKDPTTAVFDMSAKAAEQLVAFSKEQNLESIVFVLCTELPALQSIN------GMGRGG 2564
E AH K +R D + T+ + +D + +D++ + L RGI FT VQ +D +L+GRD+IG+SRTGTGKT+AFGLP I L + + + RGR P LV+CPTRELARQV +ELA ++ P GL +VFHGG SY PQ AL QGLDI+V TPGRV+DHL RG L+L E+Q VLDEADEMLNMGFA+D+E I N + Q LLFSAT P WV I +Y N L +DA G D ++A+TV+H+A++V + +LEDII V K H IVF +TK+ DEL +G FK+LT+Q LHGD+SQ QRD T+N FR G F VLVATDVAARGID+ D+DLVVQ PPRD DTYVHRSGRT V+V ++ + DI RIE+ +G F+F+ PS E ++ A + + + EE+ +F ESA LLA+ D ED ++ARCLAAISR+ T V RS+L+GE VTVQM N R++ DV+F V KLAR + FE +GKI +A+D TA+FDMS + A++LV FSK+ + F + E+ + N GRGG
Sbjct: 59 EPAHIQGSKPMRTDLVATEEDFTDPNFLRTTNPRWIQAGLDSRVLDVLNSRGITHFTKVQGEAFDPVLAGRDVIGRSRTGTGKTLAFGLPSIARLNKLLANRREANGRLPRGRLPGMLVLCPTRELARQVKDELAAVAEPLGLYVDVFHGGVSYDPQSRALSQGLDIVVGTPGRVMDHLDRGTLSLNELQIVVLDEADEMLNMGFAEDVEVILEGAGKSNKDKTQCLLFSATTPKWVNEIGRRYQRNVLEIDATGNQDARVASTVRHLAVQVPPGVSAKKAILEDIIAVEISKDAGGDSESATDESENEFHNPVAAAAKKAKKQHLQQKIFGKTIVFCETKKMADELVSGGVFKSLTAQALHGDVSQKQRDATLNAFRAGAFNVLVATDVAARGIDIQDVDLVVQMDPPRDVDTYVHRSGRTGRAGNKGVSVLMFNPQQSRDIVRIERDLGHNFRFQLTGPPSIEAALNAAAKTSALACQGIPEEVSTHFEESAAALLADED-EDPVKVVARCLAAISRRATQVESRSLLTGEVGMVTVQMMNERRSVAPNDVLFTVSKLARLSRESADLTFENDIGKI-LARDDKTAIFDMSLEDAKKLVEFSKDVDAGGNTFSILKEMEVERGNNFGRVYSSPGRGG 695
BLAST of mRNA_D-herbacea_F_contig11.873.1 vs. uniprot
Match: A0A7S3V908_9STRA (RNA helicase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V908_9STRA) HSP 1 Score: 462 bits (1189), Expect = 1.800e-140 Identity = 274/603 (45.44%), Postives = 361/603 (59.87%), Query Frame = 3
Query: 936 KDIDAQTVASLAKRGIDTFTPVQAITYDHILSGRDIIGKSRTGTGKTIAFGLPVIQHLARFAEDHKTRTSM----RGRAPRFLVVCPTRELARQVYEELATLSRPFGLRAEVFHGGASYGPQEGALRQGLDILVATPGRVIDHLQRGNLNLGEVQHAVLDEADEMLNMGFADDIESIFSYV---NVRECQVLLFSATVPSWVRNIASKYTDNPLTVDAVGKNDNKLATTVKHVAIEV--SARHRATMLEDIITV---------------------------------YGKGSHA---------IVFTQTKRECDELAAGQAFKTLTSQVLHGDISQNQRDLTINQFRKGQFQVLVATDVAARGIDVSDIDLVVQYRPPRDSDTYVHRSGRTXXXXXXXVAVTLYADNEMNDIRRIEQGVGQGFKFERGPVPSAEQVMSLAGTVAREQIKAVSEEMVGYFMESAQELLAEGDSEDKEMLLARCLAAISRKTD-VTRRSILSGEPDKVTVQMN--APRALTTGDVMFAVGKLARAA------GFEAMVGKISVAKDPTTAVFDMSAKAAEQLVAFSKEQNLESIVFVLCTELPALQSINGMGRGG 2564
K +D + + +L+ +GI TFT VQ ++ +L+GRD+IG+SRTGTGKTIAFG P I +A A+ + S RGR FLV+CPTRELARQV +EL+ + +P L +FHGG SY PQ ALR G+DILV TPGRVIDH+QRGNLNL E VLDEADEMLNMGFADD+E I V N ++ Q LLFSAT P W++ I Y NP+++DA N + ATTV+H+AI+V + ++LEDII V G++A IVFT+TKR+ DEL +G FK+L++Q +HGDI Q QRD T+N FR G F VLVATDVAARGID+ D+DLVVQ+ PPR+ DTYVHRSGRT +V L+ + DI +IE+ VG FKFE PS+E M A + ++V + YF E+A LLA G E E ++A+CLAAISR+ V RS+L+GE T++M+ R +T GDVM+ + KL+R + GF++ VGKI AVFD+ A++L+ FSK+ + F + EL L+ GRGG
Sbjct: 187 KGMDQRLIDTLSAKGITTFTEVQGKAFEPVLAGRDVIGRSRTGTGKTIAFGFPTIHRIAEMAKTNGNMDSYGKMRRGRGVSFLVLCPTRELARQVGDELSLVGKPLNLYTTIFHGGVSYDPQARALRNGIDILVGTPGRVIDHIQRGNLNLSECDTVVLDEADEMLNMGFADDVELILDGVGSSNEQKTQCLLFSATTPRWIKEIGRNYQSNPISIDASADNSARTATTVRHIAIQVPPGPDSKKSILEDIIAVEISKDIDKAKIAGEDKEEEDLSHNPIAMAAXXXXXXGNNAMQQKIFGKTIVFTETKRDADELVSGGVFKSLSAQAIHGDIGQKQRDATLNAFRAGAFNVLVATDVAARGIDIKDVDLVVQFSPPREVDTYVHRSGRTGRAGQKGTSVLLFDPRQARDIVKIERSVGHNFKFELAGPPSSEMAMIAASKTSAIACQSVPDSTSAYFKEAATNLLAGG--EPAEDIIAKCLAAISRRAGGVESRSLLTGEGGLATIEMSNTTGRPVTPGDVMYTISKLSRMSKQGDDLGFDSDVGKIKSNAQTGVAVFDVGVDDAKKLIDFSKDIDAGGAQFRILKELE-LERDQNFGRGG 786
BLAST of mRNA_D-herbacea_F_contig11.873.1 vs. uniprot
Match: A0A7S2H5C4_9STRA (RNA helicase (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H5C4_9STRA) HSP 1 Score: 454 bits (1169), Expect = 1.020e-138 Identity = 264/570 (46.32%), Postives = 354/570 (62.11%), Query Frame = 3
Query: 966 LAKRGIDTFTPVQAITYDHILSGRDIIGKSRTGTGKTIAFGLPVIQHLARFAEDHKTRTSMRGRAPRFLVVCPTRELARQVYEELATLSRPFGLRAEVFHGGASYGPQEGALRQGLDILVATPGRVIDHLQRGNLNLGEVQHAVLDEADEMLNMGFADDIESIFSYV---NVRECQVLLFSATVPSWVRNIASKYTDNPLTVDAVGKNDN-KLATTVKHVAIEVSARHRA--TMLEDIITV------------------------------------------------YGKGSHAIVFTQTKRECDELAAGQAFKTLTSQVLHGDISQNQRDLTINQFRKGQFQVLVATDVAARGIDVSDIDLVVQYRPPRDSDTYVHRSGRTXXXXXXXVAVTLYADNEMNDIRRIEQGVGQGFKFERGPVPSAEQVMSLAGTVAREQIKAVSEEMVGYFMESAQELLAEGDSEDKEMLLARCLAAISRKT-DVTRRSILSGEPDKVTVQMNAPRA--LTTGDVMFAVGKLARAA-------GFEAMVGKISVAKDPTTAVFDMSAKAAEQLVAFSKE 2483
L+ +GI TFTPVQ ++ I++GRD+IG+SRTGTGKT+AF LP I L E+ + + RGR P +V+CPTRELARQV EE+ +SRP L + VFHGG SYGPQ ALRQGLDILV TPGR++DHL RGN +L EV VLDEADEMLNMGFA+D+E+I V N ++ Q LLFSAT P WV+ I +Y ++ +++DA + + ATTV+H+AI+V + ++LEDII V +GK IVFT+TKR+ DEL +G FK+LT+Q LHGD+ Q QRD T+ FR G F VLVATDVAARGID++D+DLVVQ+ PPRD+DTYVHRSGRT +V L+ + DI RIE+ +G GFKFE PS E +S A + + + +E +F ++A LL +G ED + ++ARCLAAISR++ +V RS+L+GE VTV+M R ++ GDVMF V KL++ + F++ VGKI + +A+FDM + A++LV FSK+
Sbjct: 180 LSAKGITTFTPVQGEAFNPIVAGRDVIGRSRTGTGKTLAFTLPSITRLTAPDENGEVKYRGRGRKPSMIVLCPTRELARQVQEEILQVSRPLSLYSTVFHGGVSYGPQASALRQGLDILVGTPGRIMDHLDRGNTDLSEVDIVVLDEADEMLNMGFAEDVETILEGVGSANEKKTQFLLFSATTPPWVKEIGEQYQEDVISIDATSEEAGARTATTVRHMAIQVPPGQDSAKSILEDIIAVEISKDVDPHALGKKKXXXXXLAELNPIAAAXXAEKRKTNANSDMQQKIFGK---TIVFTETKRDADELVSGGVFKSLTAQALHGDVGQKQRDATLAAFRAGAFNVLVATDVAARGIDINDVDLVVQFEPPRDTDTYVHRSGRTGRAGRKGTSVLLFRPYQSRDIVRIERSLGHGFKFELAGPPSIESALSAAAKTSAIACRGIPDETANFFQDAASSLLEDG--EDPQQVVARCLAAISRRSAEVQSRSLLTGELGLVTVEMTNSRGRPVSPGDVMFTVSKLSKMSQRGEGDLNFDSDVGKIHADFETGSAIFDMGVEDAKRLVEFSKD 744 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig11.873.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig11.873.1 >prot_D-herbacea_F_contig11.873.1 ID=prot_D-herbacea_F_contig11.873.1|Name=mRNA_D-herbacea_F_contig11.873.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=872bp MSPQRGTTTLAILGLLAGFVNVDAFRLSPVRGAGLPSGLACTQQTSSVSRback to top mRNA from alignment at D-herbacea_F_contig11:1251545..1268811+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig11.873.1 ID=mRNA_D-herbacea_F_contig11.873.1|Name=mRNA_D-herbacea_F_contig11.873.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=17267bp|location=Sequence derived from alignment at D-herbacea_F_contig11:1251545..1268811+ (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig11:1251545..1268811+ >mRNA_D-herbacea_F_contig11.873.1 ID=mRNA_D-herbacea_F_contig11.873.1|Name=mRNA_D-herbacea_F_contig11.873.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=5232bp|location=Sequence derived from alignment at D-herbacea_F_contig11:1251545..1268811+ (Desmarestia herbacea DmunF female)back to top |