mRNA_D-herbacea_F_contig11.872.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig11.872.1
Unique NamemRNA_D-herbacea_F_contig11.872.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
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BLAST of mRNA_D-herbacea_F_contig11.872.1 vs. uniprot
Match: D8LE99_ECTSI (ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE99_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 8.340e-48
Identity = 93/157 (59.24%), Postives = 115/157 (73.25%), Query Frame = 2 
Query:  155 QGLTFLLGAWSASSFVLPSALLTNRVTWTGRPATCISLNRAPCYAPRMAAGVAMPEVVIAKPSIGLVSNTES--QSSVRPEDKFKVLLFNDNGNTREYVSRSLVQVVGLPEEKAFYIMQQANDNGMAQVGVWHQEMADAYSSSLKERGLIADVFPVD 619
            Q L   L A ++++FV+P+         +GRP + ++          MAAGVAMPE+  A PSIG++   E   ++S+RPEDK+KVLLFNDNGNTREYVSRSLVQVVGL E  AF+IMQQANDNGMAQVG+WHQEMADAYS+SLKERGLIA+  P +
Sbjct:    6 QVLILALVASASTAFVVPAWTAMRPAAASGRPISALN----------MAAGVAMPEIKTAGPSIGVLDKKEVSFETSIRPEDKYKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQANDNGMAQVGIWHQEMADAYSTSLKERGLIAETHPAE 152
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BLAST of mRNA_D-herbacea_F_contig11.872.1 vs. uniprot
Match: A0A835ZJP8_9STRA (ATP-dependent Clp protease adaptor protein ClpS-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJP8_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.910e-25
Identity = 51/90 (56.67%), Postives = 68/90 (75.56%), Query Frame = 2 
Query:  350 LVSNTESQSSVRPEDKFKVLLFNDNGNTREYVSRSLVQVVGLPEEKAFYIMQQANDNGMAQVGVWHQEMADAYSSSLKERGLIADVFPVD 619
            L+    ++    P DKFKV+LFNDNGNTREYV+RSLVQV+G+ E  A+ IM  A+ NGMA VG+W+ E A+AYS  LK RGL++++FPV+
Sbjct:   44 LIQPGTAEDQPSPADKFKVMLFNDNGNTREYVARSLVQVIGMTESDAYDIMTMAHKNGMALVGIWNLERAEAYSDQLKTRGLVSEIFPVE 133
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BLAST of mRNA_D-herbacea_F_contig11.872.1 vs. uniprot
Match: A0A0M0LSS8_9EUKA (ATP-dependent clp protease adaptor protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0LSS8_9EUKA)

HSP 1 Score: 82.8 bits (203), Expect = 2.830e-15
Identity = 62/148 (41.89%), Postives = 82/148 (55.41%), Query Frame = 2 
Query:  185 SASSFVLPSALLTNRVTWTGRPATCISLNRAPCYAPRMAAGVAMPEVVIAKPSIGLVSNTESQSSVRPED--KFKVLLFNDNGNTREYVSRSLVQVV-GLPEEKAFYIMQQANDNGMAQVGVWHQEMADAYSSSLKERGLIADVFPVD 619
            SAS+ V+P+  L   VT      T +SL  A     R+A  V  P  V  K  +  ++ T+  S    E   K+KVLLFNDN N REYV+R LV  + G+ +  A+ +MQ+A+  GMA VGVW  E+A+AY   LK  GLIA V   D
Sbjct:   17 SASALVVPARALMPEVTPASASRTVLSLRTA-----RVAMQVDAP--VRPKVDVPQLAPTKPSSDKDNEKAKKYKVLLFNDNVNRREYVARILVGAIPGMSQADAYLVMQKAHKQGMAVVGVWVFEVAEAYCDKLKSGGLIASVTEED 157
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BLAST of mRNA_D-herbacea_F_contig11.872.1 vs. uniprot
Match: A0A7S2V4Q9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4Q9_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.950e-14
Identity = 47/102 (46.08%), Postives = 65/102 (63.73%), Query Frame = 2 
Query:  296 MAAGVAMPEVVIAKPSIGLVSNTESQSSVRPED--KFKVLLFNDNGNTREYVSRSLVQVVGLPEEKAFYIMQQANDNGMAQVGVWHQEMADAYSSSLKERGL 595
            +A+ V+M  V+  KP    +      +S +P +   +++LLFNDN NTREYV+R L  +VGL E KAF IM +A+ NGMA VG W  E+A+AY+ SL   GL
Sbjct:   54 LASFVSMSTVIENKP----IEKKGLDNSYQPANGGDYQILLFNDNMNTREYVARCLCTIVGLSEGKAFEIMLEAHKNGMAVVGSWRYELAEAYNESLNRHGL 151
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BLAST of mRNA_D-herbacea_F_contig11.872.1 vs. uniprot
Match: A0A7S4HUU8_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HUU8_9EUKA)

HSP 1 Score: 77.0 bits (188), Expect = 3.440e-13
Identity = 43/89 (48.31%), Postives = 58/89 (65.17%), Query Frame = 2 
Query:  356 SNTESQSSVRPEDKFKVLLFNDNGNTREYVSRSLVQVV-GLPEEKAFYIMQQANDNGMAQVGVWHQEMADAYSSSLKERGLIADVFPVD 619
            +N + Q + +   K+K+LLFNDN N REYV+R LV  V    +  A+ +MQ+A+ NGMA VGVW  E+A+AY   LK+ GLIA V   D
Sbjct:   70 ANPDQQKAPQKGKKWKLLLFNDNVNKREYVARVLVSSVPDFSQADAYKVMQKAHQNGMAVVGVWVFEVAEAYCDKLKQGGLIASVTEED 158
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BLAST of mRNA_D-herbacea_F_contig11.872.1 vs. uniprot
Match: A0A7S2VY96_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VY96_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 8.560e-13
Identity = 41/93 (44.09%), Postives = 58/93 (62.37%), Query Frame = 2 
Query:  344 IGLVSNTESQSSVRP-EDKFKVLLFNDNGNTREYVSRSLVQVVGLPEEKAFYIMQQANDNGMAQVGVWHQEMADAYSSSLKERGLIADVFPVD 619
            +GLV     +   R   D ++V ++ND  NTRE+VSR LVQ+VGL E  A+  M QA+ NG+A VG +  E A+ Y  +L E G++ D+ PVD
Sbjct:   90 VGLVEKKAMKDRERTGSDAWEVRIYNDVKNTREFVSRCLVQIVGLSETFAYQTMMQAHKNGLAAVGTYAFERAEMYHEALTENGIMCDMIPVD 182
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BLAST of mRNA_D-herbacea_F_contig11.872.1 vs. uniprot
Match: A0A7S2R9I8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9I8_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.090e-12
Identity = 35/75 (46.67%), Postives = 52/75 (69.33%), Query Frame = 2 
Query:  395 KFKVLLFNDNGNTREYVSRSLVQVVGLPEEKAFYIMQQANDNGMAQVGVWHQEMADAYSSSLKERGLIADVFPVD 619
            +++VLLFND  NT+EYV+R L+ V GL E  AF  M QA+ NGM  +G+W +E+A+ ++ +L E GL+  + P D
Sbjct:   92 RYRVLLFNDPMNTKEYVARQLMTVAGLSENNAFDCMMQAHRNGMGLIGIWMREVAEHHTQTLTEAGLLVSMMPDD 166
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BLAST of mRNA_D-herbacea_F_contig11.872.1 vs. uniprot
Match: A0A7S3B7I0_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3B7I0_9EUKA)

HSP 1 Score: 71.6 bits (174), Expect = 2.380e-11
Identity = 40/76 (52.63%), Postives = 51/76 (67.11%), Query Frame = 2 
Query:  395 KFKVLLFNDNGNTREYVSRSLV-QVVGLPEEKAFYIMQQANDNGMAQVGVWHQEMADAYSSSLKERGLIADVFPVD 619
            KFK+LLFNDN N REYV+R LV  +    +  A+ +MQ+A+ +GMA VGVW  E+A+AY   LK  GLIA V   D
Sbjct:   76 KFKLLLFNDNVNRREYVARVLVGNIPDFSQTDAYRVMQKAHKSGMAVVGVWVFEVAEAYCDRLKSGGLIASVTEED 151
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BLAST of mRNA_D-herbacea_F_contig11.872.1 vs. uniprot
Match: A0A6U6GRI4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6GRI4_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 3.540e-11
Identity = 35/76 (46.05%), Postives = 52/76 (68.42%), Query Frame = 2 
Query:  392 DKFKVLLFNDNGNTREYVSRSLVQVVGLPEEKAFYIMQQANDNGMAQVGVWHQEMADAYSSSLKERGLIADVFPVD 619
            + ++V ++ND  NTRE+V+R LVQ+VGL E  A+  M  A+ NG+A VG +  E A+ Y  +LK+ G+I D+ PVD
Sbjct:  107 EAWEVRIYNDGMNTREFVARCLVQIVGLTEMTAYQTMMDAHQNGIAVVGRYVYERAEMYHEALKKNGIICDLVPVD 182
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BLAST of mRNA_D-herbacea_F_contig11.872.1 vs. uniprot
Match: A0A7S2A9L9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9L9_TRICV)

HSP 1 Score: 71.2 bits (173), Expect = 6.460e-11
Identity = 35/76 (46.05%), Postives = 51/76 (67.11%), Query Frame = 2 
Query:  392 DKFKVLLFNDNGNTREYVSRSLVQVVGLPEEKAFYIMQQANDNGMAQVGVWHQEMADAYSSSLKERGLIADVFPVD 619
            + ++V ++ND  NTRE+V+R LVQ+VGL E  A+  M  A+ NG+A VG +  E A+ Y   LKE G+I D+ PV+
Sbjct:  106 EAWEVRIYNDGMNTREFVARCLVQIVGLTEFDAYQTMMHAHQNGIAVVGRYVYERAELYHDGLKENGIICDLVPVE 181
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig11.872.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE99_ECTSI8.340e-4859.24ATP-dependent Clp protease adaptor protein ClpS n=... [more]
A0A835ZJP8_9STRA1.910e-2556.67ATP-dependent Clp protease adaptor protein ClpS-do... [more]
A0A0M0LSS8_9EUKA2.830e-1541.89ATP-dependent clp protease adaptor protein n=1 Tax... [more]
A0A7S2V4Q9_9STRA1.950e-1446.08Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4HUU8_9EUKA3.440e-1348.31Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A7S2VY96_9STRA8.560e-1344.09Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2R9I8_9STRA1.090e-1246.67Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3B7I0_9EUKA2.380e-1152.63Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A6U6GRI4_9STRA3.540e-1146.05Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2A9L9_TRICV6.460e-1146.05Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig11contigD-herbacea_F_contig11:1245631..1251446 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score173.3
Seed ortholog evalue9.1e-41
Seed eggNOG ortholog2880.D8LE99
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.ATP-dependent Clp protease adaptor protein ClpS
EggNOG OGs2CYZ7@1,2S7DJ@2759
Ec32 ortholog descriptionATP-dependent Clp protease adaptor protein ClpS
Ec32 orthologEc-00_001440.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1177
Cds size486
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig11.872.1prot_D-herbacea_F_contig11.872.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig11 1246186..1251310 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927509.968647-UTR-D-herbacea_F_contig11:1245630..12461851622927509.968647-UTR-D-herbacea_F_contig11:1245630..1246185Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig11 1245631..1246185 -
1690790208.204674-UTR-D-herbacea_F_contig11:1245630..12461851690790208.204674-UTR-D-herbacea_F_contig11:1245630..1246185Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig11 1245631..1246185 -
1622927510.0237129-UTR-D-herbacea_F_contig11:1251310..12514461622927510.0237129-UTR-D-herbacea_F_contig11:1251310..1251446Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig11 1251311..1251446 -
1690790208.2549703-UTR-D-herbacea_F_contig11:1251310..12514461690790208.2549703-UTR-D-herbacea_F_contig11:1251310..1251446Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig11 1251311..1251446 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927509.978329-CDS-D-herbacea_F_contig11:1246185..12462991622927509.978329-CDS-D-herbacea_F_contig11:1246185..1246299Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig11 1246186..1246299 -
1690790208.2169003-CDS-D-herbacea_F_contig11:1246185..12462991690790208.2169003-CDS-D-herbacea_F_contig11:1246185..1246299Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig11 1246186..1246299 -
1622927509.9899323-CDS-D-herbacea_F_contig11:1247041..12471521622927509.9899323-CDS-D-herbacea_F_contig11:1247041..1247152Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig11 1247042..1247152 -
1690790208.2262514-CDS-D-herbacea_F_contig11:1247041..12471521690790208.2262514-CDS-D-herbacea_F_contig11:1247041..1247152Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig11 1247042..1247152 -
1622927510.001632-CDS-D-herbacea_F_contig11:1250132..12502431622927510.001632-CDS-D-herbacea_F_contig11:1250132..1250243Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig11 1250133..1250243 -
1690790208.2353299-CDS-D-herbacea_F_contig11:1250132..12502431690790208.2353299-CDS-D-herbacea_F_contig11:1250132..1250243Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig11 1250133..1250243 -
1622927510.0129123-CDS-D-herbacea_F_contig11:1251160..12513101622927510.0129123-CDS-D-herbacea_F_contig11:1251160..1251310Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig11 1251161..1251310 -
1690790208.2441308-CDS-D-herbacea_F_contig11:1251160..12513101690790208.2441308-CDS-D-herbacea_F_contig11:1251160..1251310Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig11 1251161..1251310 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig11.872.1

>prot_D-herbacea_F_contig11.872.1 ID=prot_D-herbacea_F_contig11.872.1|Name=mRNA_D-herbacea_F_contig11.872.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=162bp
MFHRLPQGLTFLLGAWSASSFVLPSALLTNRVTWTGRPATCISLNRAPCY
APRMAAGVAMPEVVIAKPSIGLVSNTESQSSVRPEDKFKVLLFNDNGNTR
EYVSRSLVQVVGLPEEKAFYIMQQANDNGMAQVGVWHQEMADAYSSSLKE
RGLIADVFPVD*
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mRNA from alignment at D-herbacea_F_contig11:1245631..1251446-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig11.872.1 ID=mRNA_D-herbacea_F_contig11.872.1|Name=mRNA_D-herbacea_F_contig11.872.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=5816bp|location=Sequence derived from alignment at D-herbacea_F_contig11:1245631..1251446- (Desmarestia herbacea DmunF female)
CTTCACATCACATTAGGTCTGCCCTTGCTTTCAGCCAACACTTACTACGC
TTCTTGCTACTCGTGTAGGCCCTCGCGAACAACACTTTTCCCTTCCTAAG
AGGTGTGCTGCTGCTGTTGTGCTCCTTCCGCTCACCATGTTTCACCGACT
CCCTCAAGGGCTGACTTTCTTGCTAGGCGCATGGTCCGCGAGCTCGTTCG
TACTGCCGTCAGCGTTACTCACGAACCGCGTTACGTGGACAGGCCGACCT
GCGACGTGCATCTCGCTCAACAGGGCGCCGTGCTATGTGAGTGTTGGTTG
TGGAAGAGCTTTGGGGGATGTGTGTGTGTGTCTGTTGAGTAGGTGTTTCG
CAGGAAGCATTAGGTATTTTGTTTTTGCACTGTACGACTGACTGTTGTTA
TTGTTTCCTGTTTCCTTGGCTATGCTTGACTCCGTTGCGAAAATGCGAAT
TAAACAACGCAAACGTGAAATGATGGACAAGTGTTGCTTATTTATACGTT
GGGGACGTTGGGGACATGGTGTGATTTGTGGGTGTTGCTTTTTGCACTAG
CGTTGATTGCCACGAGAGAGGTCGGGCAAAGTTCACAATATTTCTTTGTG
GTATGGGCATGCGTTCTTCCTTCGCTTGTGCAGCGTCATGCTTCCCCTGA
ATATACATATTGTAGGAGTTGCGTACAAAGTATCATAGCGAACCAAAGGT
TTCGCTGAAAAAGCGTTGACTGAAGACCAGAATATTGATATTCCTCCGCT
ATGTACGATATCATATGGAGAGCTTTGTTGGCTGTACCCTCATACCCTCA
CTACTCAGTACTGTACTGACAATTTCTGCTGTACTATTGTTGTATACATA
CCTGCTGTGTACAATGTGACCCAAACCCTCGACAATCGATCATGTAGCAG
TGACAAGGTGTTGCATCGGCAAAAGTTCCTTCCGTGTATGTAATATGTAA
TGGCCGTGCCCCATCGCGTTCTGCAGTGGCTGACGTTCGTATTCGTGCAC
TCGATATTATTGTTGCACGTGTACGAATGCCTCCAGTCCATCCATGATAC
TATAATGCATACTACGCGTCTGCTACTACTATTCATACTACTGTCTGTTG
TCATATTGTACTGTTAGGTGGGTGCATTTGGCCGGTATGTGCTTGAGACG
CTATAGAGCTAACGAGTGCGTTCCATGTTTTGCTCTTGTGAACACTCTCT
CAGGCGCCCAGGATGGCTGCAGGCGTAGCGATGCCCGAAGTGGTGATCGC
CAAGCCGTCCATCGGTCTCGTGAGCAACACGGAGAGCCAAAGTTCTGTCA
GGCCCGAGGACAAGGTATGGGATGGAGTGGACCCCATTTATGTAGACAGA
TGTTATGATGATAGTATCATCGTTACCTTTCACGAGCACCGAGACGAAAC
AAGACGCAACCCAACCTCAACACAACTCAACAAAACACAACAACGCCAGC
AAGCACCACTGCCCAACACAGCCCAACCCAACGTGTTTATCCCAAACTAC
GAGCCCGACGATATTGCGAACCCAATGTGCTTATTCCAACACCACACAGC
CCAATTGTATACATACTCGTAATCCTTATATATTTTGTTTTTATTTTTAC
TTACAAATACATCAGCCGGGATGTTCCAAACTGGTTCGGGGGCCAGGGGA
TAATCGTCAACCTCACTGTTGTGTGATACTAACGTAACAAACAAAGCAAA
CATGTGCAGGCAGCTGCCGTTGGTCCGCACATAAGTTTTATGATACGGTA
TCATAGTTAGTTGTTGTGCTGTTGAAGAGAAACACGTTGCTATAATAGTT
CCCAGTCTTGTTGGTTATAATAGCTATCATAATACTAATAGCTGTTCGGT
GTTCTTCCCGTCAACCTGAGGTCGCGAGTTGTCGCTTTCACCTTACGTCG
ATATTAGTATAACAAACAGTACAGTAGTAGCATCGCACTACTGCTGTCAC
TAACACCTTGCCCCACCGGGGTATTTTGCTCACAGAAGACGCTTTTGTTC
ACAAACGTAACACATGATAACATGACAAACGCTCCGGAAAATTCCTTATC
GGCCTTGTGCTGAAATGGAAATTCTGTTTTTTGGTCGCAAGGAGCATGTC
GTGTCGTATGAACGCATTACTCTCAAGTACAGACAATAACATATTATTAA
TAATACCTGGTATAATAGTACACGAGTATCTAGTATTATTATTTTTACTT
GCAAAAGACATCGGCCGTGACGTTCCAAATTGGTTCGGGGGCCAGGAGAT
AATCGTCAACCTCACTGTGTGATACATCGGTCGCGCGGATTCTATCGGTT
CTCAGATAACTTGTAGCGCAGCGGCTCCCCTTGGGCGTCCCAGGCTCTAC
AGGATAAAATATGATACTGATACTATAATATCACATGATACATTATACTA
CAACAGTACTTACTACTAACTACTACTATCACTATATACTACTGTACTAC
TATAATACGACTATACGACTACGTACTGTTGTACTACTTTACTGTTGTTG
AAGTTTTAAAATTGCAATAGGATCATCTGTGTCTGTCATTCTACTACTGT
TGTTGTTGTGTGCTTTACTACTCCTTCCTGTTTTTTGAAGACGCTTTGTT
TGATGTCTGCGGTGCACAGCAAACTAGTAGATGATTGGTGCCAGCTCCTT
CACAATGGCCCCTATAAACTACCCGTCCCACAATATCTTGTATAGCTTGG
GAGTGTGTCAGTTACAGCCGATGTTTTTGTTCTTTTTAATGAGGGGCGAC
GCTATCTATGGTCTATGTGATTGTAGGTTGTCGCCTCTGTTAGACCTAAT
GAGAAGTTCGGGGTTCGATTCCCGGTGAAATAAAATGACACTTTTATGGC
CACCTTCCGTCGCGGAAAGCGCGAGAGGAGCGTAAGTAAGCACATTAATT
TAGTGACAGATGACGAGAGAAGAAATTGCTGTGCCCTTGTCGCGATAAAA
ATATAGGCACGTACCGTAGTGGGGAGGGGGGAGGATCGTCTACTACTGTA
TGTGACCCCGGGTCTGAGTTACGAACAGAAGAGATATGGAGCTACAGAAG
GAATAGGGCGAAGATAATAAATAGAATGGGGAAAAAAAGTATCCGTGTCG
AATGCGGACCACCCTGAATGCTTTAAAAGTTAGCTAAGCTTATTGGTTAC
ACGTGGACCTATTATATAGCTATTGATAGTATACATGCTCCCTCTTGATA
TTATATACCTGGTACATTATACGAAGTACGAGTTTAGCCTACCATTTTGC
GGATGTCATCAGAGTGTCTCCTATATGGGCGCTTGGGTTTCGTCTCGCCT
CTAATATTGAAAACACGTTCTACCTACGGGTACACGTACTTTTCCTTACT
CTTTTGGCACGATCTTTACGCCCTAACCGACATTTTGCCTTTCGGGTTTT
CCTTAACACCCTTGGCATGCGCCCTTAAATCCTGCGAGCCTGTCGGCCAT
GTTATATTATACCAGGTAGGATAATACATCGCTGAAGAGGAAACATGAGG
CCCGTTGGTAATGTAATGTATTAATAGGTGATACATCACTACTTTCTTCA
GTCTGACAGATGGACGCCGTGTTCAGAGAGGGTCTGTCTGTCTGTCTGTC
TGTCTCCCAGCTGCGTTTGAGATCCGCGTTCGCTGTATGTCGGGGTGGGC
GTTGTGTTGGTGTTCCTGCGGCACAAGCGTCCAAAAACGGAAGCGGTGTT
GCTTGTGTGAGATGCAAGCACTGCTTACAGTCTGTTGTTCAAGTACGACA
AACGAAAAAAGTTCAGTAAACATGTCCATCCACCGATGCCAGTGTTGAGG
GATACTGTACTGTACTGTACTGTACTCTACAGTGTACCAGATACTGTCGC
ACTGAATTATTAGCCCGACATGAAAATATCCACGGCATCCCCCTATCACA
CTTGCTCTACATAAGTAGAGCCCACTAACACGGCCTGGAAGCACAGTATA
GGCGAGTAAGAAGTCGTGGACGTAGTGGACGGCAGCAGTTATCATATCAT
AGTAGTGCAGTCTTATCATGTACACGTGAAAAGCTAGAAGACACTGCAAT
CCATACTGTCAAACGCAGAGGCGTTCCCATATGTCATGTGTTGACGTACG
GACTAATATTGTACGTATACGCTTCGTGTTGCCAAGCGAGCACTTCGTGA
AAGTACAACAGTAGTAGTTAGTTGGTGCCGGAAAGCTCCACGCCCCCCTC
CGTTGACGAAACAATGTAGAAAATGTAGAATCAATGCTACTGCTTTATTA
CGTGTCTGACCCCCTCCTGTGTGTGTGTTTCTCTTGACGGGCAGTTCAAA
GTCCTGCTGTTCAACGACAACGGCAACACGCGCGAGTACGTATCGAGGTC
CCTGGTGCAGGTGGTCGGCTTGCCGGAGGAAAAAGCGTTCTACATAATGC
AGCAGGTACCCACCACCCCCAGATATGTCCCGCCCTGAATAGCCAAATAC
TCAATTGCTTGGCGAGACTCGATTTCGGCTCCAAACCCTCGCGTTATGTA
TGTGGGTATGTGGGCAGGGGTGCAGTCTCTTGAGCTCCACTACCACCGAC
GGCTGTGTTTATGGCGATCATCTTTTCCGATCATCATCGCCGACCTTCTA
CTATTTGGTTTTTCTCGGTATCTTTGCTTGCTGAGTATAGCTGCTAGAGT
CTAGTGGTGGGGCATCGACGGGTTGTCGTCCTATAGTGGGTGCTATTACC
TACGAATAGGGTGCTACATACGCGTCTCCAGCGCCGTTCAAAAATCGAAA
ATTGAACGTGGTGCGTACATTATTGCCGTGTTTTTCCAGCTCTTGTACAG
TTTATGTTCAAGGTTGCGCTCCTGAGTTGGCGTGACACGCCCACGAGTTG
GAGGCTGATTGTCGCGCACCACTTTGCAGCTATTACACCTGATATTGCAT
ACAGTAGTGTATACGAAGTGTTACATACCTTATTTCAGCTCGTGGAGCTA
ACTGTTTTTATTTACGCCGTTCTTGGGAAATTCCCAGAACGTGTTGTATC
GATTGTTTTTGACGCGCAAACAAGATGGAAGATACCTCCAACCACCTGTG
AACGGCCTGTTGTAGCGTGGTAACGAGGACTCGCGCTTGCTTCCGTTCCT
TTGATATTTCGTTTGCGTGCAAAAATGTCGCTGGCGTATCACACCAGGCG
AACGATAATGGCATGGCTCAGGTGGGGGTGTGGCATCAAGAGATGGCTGA
CGCCTACAGCTCTTCGCTCAAGGAAAGGGGCCTCATCGCCGACGTTTTCC
CTGTGGACTGAGAAAGCCGCATTTTTTTATAATTTGTTTTTTCTTGAGCA
CAGCTACCGCCTGTATAGCGGTGCCGCCACGCGGTGATACGGATTAAGCT
GTGTGTAAAGGTGTGCGTCAAGTTGACGATTTCACGGACGCGCCCGCTCT
TGTTTGCCCTGGATGTGCCGATGCTATAGAGGGCATGAGAAGACCGGGGA
CCTAGGGGTCACGAGAACGCCCCCGAGGGCGGAGGGTTTGCTAGGGGCTG
CTGATTCCAATAGGCTCGCCTCGTCTGTTTTATTGTTGTGTTTACTTGTC
TATTTGCGTCTGAATATTGGTAGTACTCCCGGTGGACGAACCTTTTGGCC
TGATGTACGTCTGATGTATGATGTATGTCAGGAAAGGGCTGCCGTCCCAG
TTGTCAGTGCTTTCGGAGTATGCTGTAGGTTTATTGTGCAAAGGGGGTCG
GGCTGGGTCGGAACCGGCGCAGATCTTAGGCTTCCCTCGACCACGACCAT
AATATGAAGATTCACCCGACCACCACGTGACAGGGTTTCTATTCAAGTCC
AGGATTGTAGGATAAG
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Coding sequence (CDS) from alignment at D-herbacea_F_contig11:1245631..1251446-

>mRNA_D-herbacea_F_contig11.872.1 ID=mRNA_D-herbacea_F_contig11.872.1|Name=mRNA_D-herbacea_F_contig11.872.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=972bp|location=Sequence derived from alignment at D-herbacea_F_contig11:1245631..1251446- (Desmarestia herbacea DmunF female)
ATGTTTCACCGACTCCCTCAAGGGCTGACTTTCTTGCTAGGCGCATGGTC
CGCGAGCTCGTTCGTACTGCCGTCAGCGTTACTCACGAACCGCGTTACGT
GGACAGGCCGACCTGCGACGTGCATCTCGCTCAACAGGGCGCCGTGCTAT
ATGTTTCACCGACTCCCTCAAGGGCTGACTTTCTTGCTAGGCGCATGGTC
CGCGAGCTCGTTCGTACTGCCGTCAGCGTTACTCACGAACCGCGTTACGT
GGACAGGCCGACCTGCGACGTGCATCTCGCTCAACAGGGCGCCGTGCTAT
GCGCCCAGGATGGCTGCAGGCGTAGCGATGCCCGAAGTGGTGATCGCCAA
GCCGTCCATCGGTCTCGTGAGCAACACGGAGAGCCAAAGTTCTGTCAGGC
CCGAGGACAAGGCGCCCAGGATGGCTGCAGGCGTAGCGATGCCCGAAGTG
GTGATCGCCAAGCCGTCCATCGGTCTCGTGAGCAACACGGAGAGCCAAAG
TTCTGTCAGGCCCGAGGACAAGTTCAAAGTCCTGCTGTTCAACGACAACG
GCAACACGCGCGAGTACGTATCGAGGTCCCTGGTGCAGGTGGTCGGCTTG
CCGGAGGAAAAAGCGTTCTACATAATGCAGCAGTTCAAAGTCCTGCTGTT
CAACGACAACGGCAACACGCGCGAGTACGTATCGAGGTCCCTGGTGCAGG
TGGTCGGCTTGCCGGAGGAAAAAGCGTTCTACATAATGCAGCAGGCGAAC
GATAATGGCATGGCTCAGGTGGGGGTGTGGCATCAAGAGATGGCTGACGC
CTACAGCTCTTCGCTCAAGGAAAGGGGCCTCATCGCCGACGTTTTCCCTG
TGGACTGAGCGAACGATAATGGCATGGCTCAGGTGGGGGTGTGGCATCAA
GAGATGGCTGACGCCTACAGCTCTTCGCTCAAGGAAAGGGGCCTCATCGC
CGACGTTTTCCCTGTGGACTGA
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