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Homology
BLAST of mRNA_D-herbacea_F_contig11.859.1 vs. uniprot
Match: A0A6H5K6Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Q8_9PHAE) HSP 1 Score: 455 bits (1170), Expect = 4.710e-156 Identity = 232/261 (88.89%), Postives = 244/261 (93.49%), Query Frame = 1
Query: 46 MRRRGVGVAAVKRKEKNKEAYEAVGNKLAEENLSHISEMMNTFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEICLATRGVNGGLMALPELLQRLRTKGNRKNKQAISTDDVKRATSKLQVLGSGFTVLEIGKTTMVVSVPRELSSDHSAVLRLAEASGRVTEADVAKGLQWNGDRPRRVLDELMQEGMAWVDGDGAGHAMGGGGGHPAYFFPSLWHGERLLDEGVAE 828
MRRRGVGV AVKRKEKNKEA+EAVG ++AEENLSHIS MM TFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVE+CLATR VNGGLMALPELLQRLR KGNRK +Q IS DDV+RATSKLQVLGSGF +LEIGKTTMVVSVPRELSSDHSAVL LAEASGR+TEAD+++ LQW G RPRRVLDELMQEGMAWVDGDGAG AMGGGGG PAYFFPSLWHGERLLDEGV +
Sbjct: 1 MRRRGVGVGAVKRKEKNKEAFEAVGKRVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEVCLATRSVNGGLMALPELLQRLRAKGNRKKRQEISADDVRRATSKLQVLGSGFALLEIGKTTMVVSVPRELSSDHSAVLLLAEASGRITEADISEELQWEGGRPRRVLDELMQEGMAWVDGDGAGPAMGGGGGRPAYFFPSLWHGERLLDEGVGD 261
BLAST of mRNA_D-herbacea_F_contig11.859.1 vs. uniprot
Match: D8LQG3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQG3_ECTSI) HSP 1 Score: 402 bits (1033), Expect = 3.240e-135 Identity = 209/263 (79.47%), Postives = 224/263 (85.17%), Query Frame = 1
Query: 97 KEAYEAVGNKLAEENLSHISEMMNTFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGV-------------------DPLASNKGFWAEVLGVGDFYYELAVQIVEICLATRGVNGGLMALPELLQRLRTKGNRKNKQAISTDDVKRATSKLQVLGSGFTVLEIGKTTMVVSVPRELSSDHSAVLRLAEASGRVTEADVAKGLQWNGDRPRRVLDELMQEGMAWVDGDGAGHAMGGGGGHPAYFFPSLWHGERLLDEGVAE 828
++A+EAVG ++AEENLSHIS MM TFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIG D N+GFWAEVLGVGDFYYELAVQIVE+CLATR VNGGLMALPELLQRLR KGNRK +Q ISTDDV+RATSKLQVLGSGF+VLEIGKTTMVVSVPRELSSDHSAVL LAEASGR+TEAD+++ LQW G RPRRVLDELMQEGMAWVDGDGAG AMGGGGG PAYFFPSLW GERLLDEGV +
Sbjct: 5 RQAFEAVGKRVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGCERGRGKERDIARGVEGAKRDRDMHNRGFWAEVLGVGDFYYELAVQIVEVCLATRSVNGGLMALPELLQRLRAKGNRKKRQEISTDDVRRATSKLQVLGSGFSVLEIGKTTMVVSVPRELSSDHSAVLLLAEASGRITEADISEKLQWEGGRPRRVLDELMQEGMAWVDGDGAGPAMGGGGGRPAYFFPSLWQGERLLDEGVGD 267
BLAST of mRNA_D-herbacea_F_contig11.859.1 vs. uniprot
Match: A0A835YIN3_9STRA (EAP30/Vps36 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIN3_9STRA) HSP 1 Score: 304 bits (779), Expect = 8.740e-97 Identity = 166/281 (59.07%), Postives = 195/281 (69.40%), Query Frame = 1
Query: 46 MRRRGVGVAAVKRKEKNKEAYEAVGNKLAEENLSHISEMMNTFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIG----------------------VDPLASNKGFWAEVLGVGDFYYELAVQIVEICLATRGVNGGLMALPELLQRLRTKGNRKNKQAISTDDVKRATSKLQVLGSGFTVLEIGKTTMVVSVPRELSSDHSAVLRLAEASGRVTEADVAKGLQWNGDRPRRVLDELMQEGMAWVDGDGAGHAMGGGGGHPAYFFPSLWHGERLLDEGV 822
MRRRGVGVAAVK + + K+A+E VG A EN++H+ + TFKG LE+FARKYKK INQDPAFRQQFQ MCASIG +DPLASNKGFWAEVLGVGDFYYELAVQI E+C+ATR NGGLMAL ELLQRLR + ++K+ AIS DD+KRA +KL+VLG GF ++E+GKT MV+SVPRELS+D SAVL+ AE SG + + GL W DR RR L L Q+GMAWVD G G P +FFPSLW GE LL G
Sbjct: 1 MRRRGVGVAAVKHRAREKDAFEVVGQAAAAENMAHVQATLETFKGHLEDFARKYKKSINQDPAFRQQFQTMCASIGGMGKGRHGALREQCRPHNCASHLDPLASNKGFWAEVLGVGDFYYELAVQITEVCIATRETNGGLMALQELLQRLRARRSKKS-PAISLDDIKRAIAKLKVLGRGFALVEVGKTQMVLSVPRELSNDASAVLQAAEGSGHASVRALCVGLSWTQDRARRALTALAQDGMAWVDEQAPG-------GEPLFFFPSLWKGEHLLGGGA 273
BLAST of mRNA_D-herbacea_F_contig11.859.1 vs. uniprot
Match: W7TGH7_9STRA (EAP30 family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGH7_9STRA) HSP 1 Score: 269 bits (687), Expect = 3.580e-83 Identity = 147/275 (53.45%), Postives = 198/275 (72.00%), Query Frame = 1
Query: 52 RRGVGVAAVKRKEKNKEAYEAVGNKLAEENLSHISEMMNTFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEICLATRGVNGGLMALPELLQRLRTKGNRKNKQAISTDDVKRATSKLQVLGSGFTVLEIGKTTMVVSVPRELSSDHSAVLRLAEAS-GRVTEADVAKGLQWNGDRPRRVLDELMQEGMAWVDGDGAGHAMGGGGGHPAYFFPSLWHGERLLDEGVAES*ISR--GFCGQVEG 867
RRG GV ++KRKE+ KEA+ ++G +L EEN++H++ +M TFK SLE+FARK+KKDIN +P R +F MCA IGVDPLASNKGFWA++LGVGDFYYELAVQI+EICL TR +NGGL+ L +L QR++ R+ IST+D+K A +K+ +LG+GF++L+ GKTT+VVSVP ELSSDH+A+L++A+AS VT ++ + LQW R R LD +MQ GMAW+D A G G Y+FPSLW +EG+ ++ R G G+ EG
Sbjct: 2 RRGYGVKSIKRKEQVKEAFTSLGKELQEENINHVTGLMATFKESLEDFARKHKKDINANPVLRAEFNKMCAGIGVDPLASNKGFWAQLLGVGDFYYELAVQIIEICLFTRSLNGGLICLSDLTQRVQ---KRRKVDKISTEDIKIAINKVHLLGAGFSLLQSGKTTLVVSVPTELSSDHAAILQMAQASDSHVTVGELVQKLQWVEKRVRLALDLMMQAGMAWLD------AQGADGSREVYWFPSLW------EEGLCQTQRDRVTGQGGREEG 261
BLAST of mRNA_D-herbacea_F_contig11.859.1 vs. uniprot
Match: A0A7S2W3J7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W3J7_9STRA) HSP 1 Score: 249 bits (637), Expect = 1.270e-75 Identity = 132/250 (52.80%), Postives = 179/250 (71.60%), Query Frame = 1
Query: 46 MRRRGVGVAAVKRKEKNKEAYEAVGNKLAEENLSHISEMMNTFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEICLATRGVNGGLMALPELLQRLRTKGNRKNKQAISTDDVKRATSKLQVLGSGFTVLEIGKTTMVVSVPRELSSDHSAVLRLAEA-SGRVTEADVAKGLQWNGDRPRRVLDELMQEGMAWVDGDGAGHAMGGGGGHPAYFFPSLW 792
MRRRGVGV VK +EK E Y+ +G +L ++ + H +E++ F+ LE+FA KYK I DP FR++FQ MC IGVDPLASNKG W E+LGVGDFYYEL VQI+EIC+ TR NGGL+++ +LL++LR NR ++Q +S+DDVKR+ SKL+ LGSGF++L++G+TTMV+SVP EL+ DHSAVL +A+ +G+VT V K L W DR R L+ ++ EGMAW+D H G +Y+F S+W
Sbjct: 7 MRRRGVGVGRVKNREKQTEKYKQLGAELQDDRVKHATEVLGQFRTQLEDFAEKYKSSIRSDPVFRKEFQDMCMEIGVDPLASNKGLWGELLGVGDFYYELGVQIIEICIRTRSSNGGLISMRDLLRKLRKDSNR-SRQEVSSDDVKRSVSKLKKLGSGFSLLQVGRTTMVLSVPVELNRDHSAVLEVAQRHAGQVTLDGVQKELGWAEDRATRALERMVTEGMAWIDR----HK-----GTTSYWFLSVW 246
BLAST of mRNA_D-herbacea_F_contig11.859.1 vs. uniprot
Match: UPI001E1D413E (vacuolar-sorting protein SNF8-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D413E) HSP 1 Score: 244 bits (622), Expect = 9.320e-74 Identity = 128/249 (51.41%), Postives = 176/249 (70.68%), Query Frame = 1
Query: 46 MRRRGVGVAAVKRKEKNKEAYEAVGNKLAEENLSHISEMMNTFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEICLATRGVNGGLMALPELLQRLRTKGNRKNKQAISTDDVKRATSKLQVLGSGFTVLEIGKTTMVVSVPRELSSDHSAVLRLAEASGRVTEADVAKGLQWNGDRPRRVLDELMQEGMAWVDGDGAGHAMGGGGGHPAYFFPSLW 792
MRRRG G+AA+K K + Y+ GN++AE+ + +S+ M TFK LE+F K+K +I +DP FR QFQ MCAS+GVDPLAS+KGFWAE+LGVGDFYYEL VQI+E+CLAT NGGL+++ EL ++L+ K K Q +S DD+ RA KL+ LG+GFTV+ +G T M+ SVP ELS DH+AV++ A++S VT++ + K L+W +R R L+ L++EG+ WVD D AG Y+FPSL+
Sbjct: 1 MRRRGAGIAAIKNKNLAQAKYKDKGNEIAEDQFAQMSKQMETFKSHLEDFTAKHKDEIRKDPEFRAQFQEMCASVGVDPLASSKGFWAEMLGVGDFYYELGVQIIEVCLATSHRNGGLISIEELKEKLK-KSRSKKSQDVSYDDLLRAIKKLKALGNGFTVIPVGGTYMIQSVPGELSMDHTAVIQQAQSSAHVTKSKLTKDLKWEEERANRALNYLVKEGLVWVD-DQAGSER-------EYWFPSLF 240
BLAST of mRNA_D-herbacea_F_contig11.859.1 vs. uniprot
Match: UPI000D7328BD (vacuolar-sorting protein SNF8-like n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D7328BD) HSP 1 Score: 241 bits (614), Expect = 1.310e-72 Identity = 130/253 (51.38%), Postives = 178/253 (70.36%), Query Frame = 1
Query: 52 RRGVGVAAVKRKEKNKEAYEAVGNKLAEENLSHISEMMNTFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEICLATRGVNGGLMALPELLQRLRTKGNRKNKQAISTDDVKRATSKLQVLGSGFTVLEIGKTTMVVSVPRELSSDHSAVLRLAEASGRVTEADVAKGLQWNGDRPRRVLDELMQEGMAWVDGDGAGHAMGGGGGHPAYFFPSLWHGERLL 810
RRG G+AA+K K + Y+ G ++AE+ +H+++ M FK +LE+FA K+K DI +DP FR QFQ MCASIGVDPLAS+KGFW+E+LGVGDFYYEL VQIVE+CLA+ NGGL+++ EL R+ R N Q IS DD+ RA KL++LG+GFTVL +G T +V SVP EL+ DH+ +L+LA+ SG V+++ V K L+W +R R L+ L++EGMAWVD D AG+ Y+FP+L+ + L
Sbjct: 2 RRGPGIAAIKNKNLAQARYKDKGTEIAEDQFAHMAKQMEIFKTNLEDFAAKHKDDIRKDPQFRLQFQEMCASIGVDPLASSKGFWSEMLGVGDFYYELGVQIVEVCLASSHRNGGLISIDELRDRVVASRGR-NSQDISIDDLLRAIKKLRILGNGFTVLTVGNTLLVQSVPGELTMDHTNILQLAQKSGYVSKSQVMKDLKWEEERSHRALEFLVKEGMAWVD-DQAGNER-------LYWFPTLFSDAKNL 245
BLAST of mRNA_D-herbacea_F_contig11.859.1 vs. uniprot
Match: A0A485LB62_9STRA (Aste57867_17359 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LB62_9STRA) HSP 1 Score: 240 bits (612), Expect = 6.360e-72 Identity = 130/260 (50.00%), Postives = 180/260 (69.23%), Query Frame = 1
Query: 46 MRRRGVGVAAVKRKEKNKEAYEAVGNKLAEENLSHISEMMNTFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEICLATRGVNGGLMALPELLQRLRTKGNRKNKQAISTDDVKRATSKLQVLGSGFTVLEIGKTTMVVSVPRELSSDHSAVLRLA-EASGRVTEADVAKGLQWNGDRPRRVLDELMQEGMAWVDGDGAGHAMGGGGGHPAYFFPSLWHGERLLDEGV 822
MRR +G+ AVK K++ K+AYE VG +L + +L+H+ E ++ FK +L+ FA KYK I +DP FR++FQVMCA IGVDPLAS KGFW+E+L +GDFYYELAVQI+E+C+ TR NGGL+A+ +LL L + Q IS DD+KR+ KL+VLG GF V+E+G TM+V+VP ELS DHS++L LA E G V+ +A+ L W+ +R L+ L++EGM W+D D +G +PAY+FPS+ D+GV
Sbjct: 18 MRRGKMGIGAVKWKQEQKKAYEEVGAQLEQNHLAHVQEQLDVFKTNLQTFAVKYKSQIKKDPEFRKRFQVMCAKIGVDPLASQKGFWSELLDMGDFYYELAVQIIEVCIRTRNKNGGLIAIQDLLTLLDARRG-PMMQKISDDDIKRSVKKLKVLGEGFNVIELGAKTMIVTVPVELSQDHSSILLLAQETQGVVSVPVLAEKLGWDSNRSSIALNVLLKEGMVWID-DQSGK-------YPAYYFPSMALANTATDDGV 268
BLAST of mRNA_D-herbacea_F_contig11.859.1 vs. uniprot
Match: A0A067BX53_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BX53_SAPPC) HSP 1 Score: 238 bits (607), Expect = 1.630e-71 Identity = 131/254 (51.57%), Postives = 173/254 (68.11%), Query Frame = 1
Query: 46 MRRRGVGVAAVKRKEKNKEAYEAVGNKLAEENLSHISEMMNTFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEICLATRGVNGGLMALPELLQRLRTKGNRKNKQAISTDDVKRATSKLQVLGSGFTVLEIGKTTMVVSVPRELSSDHSAVLRLA-EASGRVTEADVAKGLQWNGDRPRRVLDELMQEGMAWVDGDGAGHAMGGGGGHPAYFFPSLWHGER 804
MRR +G+ AVK K++ K+AYE VG +L + +L+H+ ++ FK +LE FA KYK I +DPAFR +FQVMC+ IGVDPLAS KGFW+E+L +GDFYYEL VQI+E+C+ TR NGGL+ + ELL RL K Q IS DD+KR+ KL+VLG GF V+E+G TM+V+VP ELS DHSA+L LA E G VT A +A+ L W+ +R L+ L++E M WVD G PAY+FPS+ G +
Sbjct: 1 MRRGKMGIGAVKWKQEQKKAYEEVGTQLTQSHLAHVQAQLDVFKTNLEAFAVKYKAQIKKDPAFRMRFQVMCSKIGVDPLASQKGFWSELLDMGDFYYELGVQIIEVCILTRPKNGGLIPIHELL-RLLDKKRGLRMQRISEDDIKRSVKKLKVLGEGFQVIELGAKTMIVTVPVELSQDHSAILLLAQETQGMVTTALLAEKLLWDVNRSTIALNVLLRESMVWVDDQNPGA--------PAYYFPSIAMGSQ 245
BLAST of mRNA_D-herbacea_F_contig11.859.1 vs. uniprot
Match: W4GXJ6_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GXJ6_9STRA) HSP 1 Score: 237 bits (605), Expect = 4.040e-71 Identity = 131/263 (49.81%), Postives = 176/263 (66.92%), Query Frame = 1
Query: 46 MRRRGVGVAAVKRKEKNKEAYEAVGNKLAEENLSHISEMMNTFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEICLATRGVNGGLMALPELLQRLRTKGNRKNKQAISTDDVKRATSKLQVLGSGFTVLEIGKTTMVVSVPRELSSDHSAVLRLAE-ASGRVTEADVAKGLQWNGDRPRRVLDELMQEGMAWVDGDGAGHAMGGGGGHPAYFFPSLWHGERLLDEGVAES 831
MRR +G+ AVK K+ K+AYE VG +L + +L+H+ E + FK +L+ FA KYK I +DP FR++FQVMCA IGVDPLAS KGFW+E+L +GDFYYELAVQI+E+C+ TR NGGL+A+ +LL L + Q IS DD+KR+ KL+VLG GF V+E+G TM+V+VP ELS DHS++L LA+ G VT A +A L W+ +R L+ L++EGM W+DG G G G AY+FPS+ G + S
Sbjct: 1 MRRGKMGIGAVKWKQDQKKAYEEVGAQLTQNHLTHVQEQLQVFKTNLQTFAVKYKSQIKKDPEFRKRFQVMCAKIGVDPLASQKGFWSELLDMGDFYYELAVQIIEVCILTRNKNGGLIAIQDLLALLDQRRG-PMMQKISDDDIKRSVKKLKVLGEGFNVIELGMKTMIVTVPVELSQDHSSILLLAQDTQGVVTVATLADRLGWDANRSTLALNVLLREGMVWLDG---GDQNGSG---AAYYFPSIALGPSTSSSSTSSS 256
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 408.7 |
| Seed ortholog evalue | 2.1e-111 |
| Seed eggNOG ortholog | 2880.D8LQG3 |
| Preferred name | SNF8 |
| KEGG ko | ko:K12188 |
| KEGG Pathway | ko04144,map04144 |
| KEGG Module | M00410 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0000429,GO:0000430,GO:0000433,GO:0000578,GO:0000741,GO:0000742,GO:0000746,GO:0000747,GO:0000814,GO:0003002,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005737,GO:0005768,GO:0005770,GO:0005829,GO:0005886,GO:0006355,GO:0006357,GO:0006403,GO:0006508,GO:0006511,GO:0006605,GO:0006623,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006862,GO:0006886,GO:0006914,GO:0006996,GO:0006997,GO:0007032,GO:0007034,GO:0007154,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007308,GO:0007309,GO:0007314,GO:0007350,GO:0007351,GO:0007389,GO:0007584,GO:0008022,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008283,GO:0008298,GO:0008358,GO:0008593,GO:0008595,GO:0009056,GO:0009057,GO:0009605,GO:0009790,GO:0009798,GO:0009880,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009948,GO:0009952,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0009994,GO:0010008,GO:0010256,GO:0010468,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010648,GO:0010796,GO:0010797,GO:0010941,GO:0012505,GO:0015031,GO:0015711,GO:0015748,GO:0015833,GO:0015865,GO:0015867,GO:0015868,GO:0015893,GO:0015931,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016236,GO:0016247,GO:0016482,GO:0016604,GO:0017157,GO:0019219,GO:0019222,GO:0019538,GO:0019941,GO:0019953,GO:0021700,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023057,GO:0030154,GO:0030163,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031902,GO:0031974,GO:0031981,GO:0031982,GO:0032456,GO:0032501,GO:0032502,GO:0032504,GO:0032509,GO:0032511,GO:0032535,GO:0032879,GO:0032991,GO:0033036,GO:0033365,GO:0033620,GO:0034613,GO:0035282,GO:0036257,GO:0036258,GO:0036452,GO:0042058,GO:0042059,GO:0042176,GO:0042221,GO:0042493,GO:0042802,GO:0042803,GO:0042886,GO:0042981,GO:0043067,GO:0043162,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043328,GO:0043632,GO:0043900,GO:0043903,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044703,GO:0044764,GO:0045013,GO:0045014,GO:0045022,GO:0045184,GO:0045324,GO:0045450,GO:0045732,GO:0045892,GO:0045921,GO:0045934,GO:0045990,GO:0046015,GO:0046618,GO:0046907,GO:0046983,GO:0047485,GO:0048284,GO:0048468,GO:0048469,GO:0048471,GO:0048477,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048599,GO:0048609,GO:0048856,GO:0048869,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051036,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051503,GO:0051603,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0055037,GO:0060255,GO:0060627,GO:0060810,GO:0060811,GO:0061635,GO:0061919,GO:0061984,GO:0061985,GO:0061986,GO:0061987,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070727,GO:0070887,GO:0070925,GO:0071496,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0071985,GO:0072594,GO:0072665,GO:0072666,GO:0080090,GO:0090066,GO:0097708,GO:0098588,GO:0098772,GO:0098796,GO:0098805,GO:0098927,GO:1901184,GO:1901185,GO:1901264,GO:1901564,GO:1901565,GO:1901575,GO:1902679,GO:1903506,GO:1903507,GO:1903530,GO:1903532,GO:1903541,GO:1903543,GO:1903772,GO:1903900,GO:1904669,GO:1990904,GO:2000112,GO:2000113,GO:2001141 |
| EggNOG free text desc. | protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway |
| EggNOG OGs | KOG3341@1,KOG3341@2759 |
| Ec32 ortholog description | Winged helix-turn-helix DNA-binding domain |
| Ec32 ortholog | Ec-10_005530.1 |
| COG Functional cat. | K |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko04131,ko04147 |
| Exons | 6 |
| Model size | 1648 |
| Cds size | 789 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622927507.8724513-UTR-D-herbacea_F_contig11:1016540..1016585 | 1622927507.8724513-UTR-D-herbacea_F_contig11:1016540..1016585 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig11 1016541..1016585 + |
| 1690790206.964114-UTR-D-herbacea_F_contig11:1016540..1016585 | 1690790206.964114-UTR-D-herbacea_F_contig11:1016540..1016585 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig11 1016541..1016585 + |
| 1622927507.9823637-UTR-D-herbacea_F_contig11:1028347..1029161 | 1622927507.9823637-UTR-D-herbacea_F_contig11:1028347..1029161 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig11 1028348..1029161 + |
| 1690790207.0383132-UTR-D-herbacea_F_contig11:1028347..1029161 | 1690790207.0383132-UTR-D-herbacea_F_contig11:1028347..1029161 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig11 1028348..1029161 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622927507.8855646-CDS-D-herbacea_F_contig11:1016585..1016642 | 1622927507.8855646-CDS-D-herbacea_F_contig11:1016585..1016642 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig11 1016586..1016642 + |
| 1690790206.979159-CDS-D-herbacea_F_contig11:1016585..1016642 | 1690790206.979159-CDS-D-herbacea_F_contig11:1016585..1016642 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig11 1016586..1016642 + |
| 1622927507.8990133-CDS-D-herbacea_F_contig11:1025153..1025323 | 1622927507.8990133-CDS-D-herbacea_F_contig11:1025153..1025323 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig11 1025154..1025323 + |
| 1690790206.9885378-CDS-D-herbacea_F_contig11:1025153..1025323 | 1690790206.9885378-CDS-D-herbacea_F_contig11:1025153..1025323 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig11 1025154..1025323 + |
| 1622927507.9143796-CDS-D-herbacea_F_contig11:1025787..1025926 | 1622927507.9143796-CDS-D-herbacea_F_contig11:1025787..1025926 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig11 1025788..1025926 + |
| 1690790206.9980602-CDS-D-herbacea_F_contig11:1025787..1025926 | 1690790206.9980602-CDS-D-herbacea_F_contig11:1025787..1025926 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig11 1025788..1025926 + |
| 1622927507.932058-CDS-D-herbacea_F_contig11:1026557..1026671 | 1622927507.932058-CDS-D-herbacea_F_contig11:1026557..1026671 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig11 1026558..1026671 + |
| 1690790207.0077713-CDS-D-herbacea_F_contig11:1026557..1026671 | 1690790207.0077713-CDS-D-herbacea_F_contig11:1026557..1026671 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig11 1026558..1026671 + |
| 1622927507.9518592-CDS-D-herbacea_F_contig11:1027638..1027815 | 1622927507.9518592-CDS-D-herbacea_F_contig11:1027638..1027815 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig11 1027639..1027815 + |
| 1690790207.0169208-CDS-D-herbacea_F_contig11:1027638..1027815 | 1690790207.0169208-CDS-D-herbacea_F_contig11:1027638..1027815 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig11 1027639..1027815 + |
| 1622927507.9670594-CDS-D-herbacea_F_contig11:1028215..1028347 | 1622927507.9670594-CDS-D-herbacea_F_contig11:1028215..1028347 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig11 1028216..1028347 + |
| 1690790207.0279634-CDS-D-herbacea_F_contig11:1028215..1028347 | 1690790207.0279634-CDS-D-herbacea_F_contig11:1028215..1028347 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig11 1028216..1028347 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig11.859.1 >prot_D-herbacea_F_contig11.859.1 ID=prot_D-herbacea_F_contig11.859.1|Name=mRNA_D-herbacea_F_contig11.859.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=263bp
MRRRGVGVAAVKRKEKNKEAYEAVGNKLAEENLSHISEMMNTFKGSLEEF ARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYEL AVQIVEICLATRGVNGGLMALPELLQRLRTKGNRKNKQAISTDDVKRATS KLQVLGSGFTVLEIGKTTMVVSVPRELSSDHSAVLRLAEASGRVTEADVA KGLQWNGDRPRRVLDELMQEGMAWVDGDGAGHAMGGGGGHPAYFFPSLWH GERLLDEGVAES* back to topmRNA from alignment at D-herbacea_F_contig11:1016541..1029161+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-herbacea_F_contig11.859.1 ID=mRNA_D-herbacea_F_contig11.859.1|Name=mRNA_D-herbacea_F_contig11.859.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=12621bp|location=Sequence derived from alignment at D-herbacea_F_contig11:1016541..1029161+ (Desmarestia herbacea DmunF female) CGCACTACAGGCGGGGTAATTGTACTGGAAGGGGGTGCCGCAGCCATGAG
GCGAAGAGGAGTTGGCGTAGCTGCTGTGAAGCGCAAGGAGAAAAACAAAG
AGGTGAGGCTATATTTTTCTTCAGAGAGCAAAAAACAAATTAATCAAGTG
TTCCACGTTATGCGATGCTTTATGCTTTGTTTCAGTCTGACCTGCGCTCT
TCTTTATGTCATCTCTGCTGCTTGTACTCGTCGTACACTCGTACGACAAG
AGATAAAATAATGCAATTCTACTGCTACACCACTTGTGGCTTGTGGCTCT
AGTTTATCGTATTAGAACTAAATCGGTAGGCACTACTATCACGAGGGCCC
CTAATAAATAGGCCCAAAACACCTATATTGACGTGTGTATCGCGAGACAG
ACGCGACGTGAATCGCGGACCTCGTTCGACTTTATCATTCGGTAGCAGTA
GACTTATCAACGATGCTACATTTTCAATCTTCGGGGAGGCGGGGGCGGGT
CGGGAAGGGTGTTTGCTCCCCCGTATTCACACCCTGTTTTGGGCCTATTT
GTCGATACACCACAAATCTGACCGCACCAAACCGCGGAGTGCGAGAGTCA
CACTGCACCCAAGGCAACGTTTGATTGCTTGTGAGTTGGCCCTTGATCAG
GCGAGGGCGATGTAGTTGGTTTGGGACCAATAAAATACGTCCCGAATCGC
AGGAGTGACGATGTTCTTTGTGTCGGCGTCGTGAAGCAAACTGTCGCTTG
GGCACGTTTTTGCTTGAAAAATTACGGGATAAGCTCACGCGGATAGGTGT
CACTCCTCCGATACTGCATAGACTCTGCTCAAACGTGGCGCATGGCGGTT
GCAGAAGATAATCATGAGCTATCGTGCAATAGCTCGTATGTCTCCGTGGG
CTGTCTGTGGGTGTCGCCGTGCGACGCAAGTAAGTGTTGGTACACCTCTC
ACAACAACTATCATACTACTACTCTAAGCACCACACTTTCTGCCTCTTCA
TTCTGGCAACTTGCTGTACAGTCCTGCTTTGTTCCTCTTCGAAGATTGAA
CGGATATTGGGGGGAAATTCCAGGTACCCATACGTGGTTGATAAGAGCCG
TCCACCCAGACTGTTATTATACTACTCTCATTACTGAGCCATGCACCTAC
ATGAAGTTTGTGTTCGTTGCCTTGCGGATTTCCCCTCACACCCTTGGCAT
GCGCCCTAAAATCCTGCGAGCCTGCCGGGCAGTTCACTGCCCGGTAGGCG
CCTTGTAAACCTATCTAGGATTGTCCCAAACGCTTGACAGCGCAGAGTTC
AACCATGGATCCTCGCCCCCGGATTTTCACGGCAAAACCCGCACACATGC
GAGTAACAAAAACGGCGTTACATTTCATTGCAAATAACGCCCTTCCTTTT
GCCCGTAACGGCGCAGCAAATCGTAAGAAATCCTAAAACACACCAATCAT
ATGCGGCAATGTTACCGATACGACTAAATCACCATCTGAAGGCACAAACC
CGCGGAGTGCGAGAGTCACACTACACCCAAAGCAACGTTTGATAGCTTGT
GAGTTGGCCCTTCATCAGGCGAGGACGATGTAGTTGGTTTGGGATCAATA
CCGCCCGAATCGCAGGAGCAACGATGTTCTTTGTGACAACGTCGTAAAGC
AAACAGTCACTTGAGCACGTTTTTGCTTGAAAAATTACGGGACAAGTTCA
CGCGGATAGGTATCACTCCTCCGATACTGCATGGGCTTTGCTCAAACGTG
GCATGCCGGCTGCAGCTAATCATGAGCTATCGTGTAATAGCTCGTATGTC
TCCGTGGGCTGTCTGTGGGTGTCGCCGTGCGACGCAAATGTAGGTACACC
TCTCACAACAACTACTCTGAGCACCACACTTTCTGCTTCTTCATTGTGGC
AACTTGCTGTACAGTCCTGTTTTGTTCCTCTTCGAATATTGAACAGATAT
TGAGGGGAAAATCCAGGTACCCATATGGGTTGATAAGAGCCGTCCACCTA
GGCTGTTATTATACTACTACTATTTCTGAGCCATGCGCCTACGATGAAGT
TTGTGTTCGTTGCCTCCTTGAGGATTTCCCTTGGCTTGCGCCCTACAATC
CTGCGAGCCTGCCGGGCAGTTCACTGCCCGGTAGGTGCCCTTGTATAGAT
ATATGATTGTTTCCACACCTGGAAGCACGTCTACCCTACCATTTTTTTTT
ATAGGATTCTTCGCAATCTTGCTCTATTTGATAGCTCTGCCAGTTATCGT
GATCCAAATTTTCGCAAAGGAGTTATGGGGTCCTTGGTAGACTGCCGTGA
GTGTGCCAACGGGACACCTTAAGCAGTGCCCTCCTTCGAGGTGGATCTGG
TCGCTGAAAGTTGAAAATGTGGTTCCAGGAGATTGAAATTGCTGTTTTTT
GTACTGTAGCCAAGTATATATTTTTCCTGCTGTAGAAGCAACACCATGTC
ATATTTATTGTACCTAGGTACCGCCGCCGATTTCCACCAAATGTCGAACC
GGGACGCCCTCGTGAAGACCGGCTGCGAGAGCATCGAAGTCACCGTGAGG
AAGCGCACCCTGCTATACGCGGGCCGCGTCGCGTGCATGGGCGATTACCG
ACTTCCGACCATCATCATGCGCGGGGAACTGGTCGGGGGAGCGCGATGGG
CTGGCAGACCCCAGCGGCAACTACAGGACTGCGTCAAGGAATACCTTCGC
GATTTTGGGATAGAGGAGAAATCCTGGATGGAGGCAGCTCGTAGAGGGGG
GTGGCGTTCTACCGTAGAGGAGGGAGCCACTAGGTATATGGCTGACTGGT
TCGCAGCGAAGAGCCGCGAGACACGCGAACGACACGCGGGTGAACTGTTC
GCTGTGTTGCCGTCGGCCCCCTAAGACGCACTGAGCACCCGCCCTCTTGT
GAAACGCGTACTTGTAAATTGTCTTTCATTGTTCGTGTTTGCCTGTTTTC
TGCTTATTATTGCTCTCTGTTTTCTTTGCCCTTGCTTTTCCCCCAGACGC
GGACAAGATGGAATCGGTGGAGGGGGTGGATTGAAATCCGTGGTGCCTGT
CCAGTGTCTTAGTTTTATTTGTGCCTCGTTTATGTTTTCGCTTTATTCTA
TTTTTTTTTTGTGTCTGCCTGTTCTCGTAGCCACTGTTATTTCCCAAGTC
GAGGAGGAGGATATGATATCAGTGGGGGTAGATTTGAGTTGTTTGTGGAG
AGGGGCCGGAGGGGTCGGTTTTATGCGGTTTTATTCGGTATAAAAAAAGG
TGCCTGCCTTTGTGACGACGGGTCCGCGCGATCGGGCTAATGTGACGGAA
ATTAATAAATAAATAAAATAAATAGAGTCTTTACCGATATAGTACTTCCA
TCTTAGACGAGAGACAATACACTTGTCACAATACAGACAGTAGTGGATAG
TTAGATTACCCGTATGACAACATCAGTAGTAGTGGTACAATATTGTTTGA
CTCGTATAATACTGCTTTCGTTTCATTTGCGATTTGGTATTCAATACTAC
TTCGAAGTATAATATTATTTAGTGACAGTAATAACGTGTTTGCGCGTAAG
AAAAATTACGTATCATAGTGTGTTTTCGTCGGTAAGTGTAGTCGAAAATG
AAGTTCTCCGTCGTGCGCATAAGCACATTTGGAATTTGCTTGAAACTAGC
TTATATTATGGATCTTGAGCGAAGAGCCATCATTTTGACAAGCTGCGAGC
AGTTTGAAATCTCTCGGTGCACAGGAGTATCACGTTCTCTCGAGGTAGGT
GTGCTGCACATCAGCGACACAATTGAACATCAGCAAGCGCCTCTCACACG
CCTCAAAATGCTGCATTACTACTTCTGGACAAGGCCGCAATCACGGTTGG
CTGCGACAAGCTTTACTGGTGGGTCGTATTCTTCGTTGATGGCTGTCTTC
GTCGCCCGCGACTAAAAAAAAAGCTTGACAACAACCGACACACACGCAAC
AACCACGAGTGAATGTCATCAGCGCTTACACAGTCACCACTGCACAGCCG
CTACTACTACTGTGCTGCTAGTCAGCGCCGTAGCACAACAACAGTAGTGC
AGCAGTTGTGTGTCTGGTGAAACCGTATGTGCTACTCATAGCGGCCCGGC
GCCCTTTGCCTACGATGATATCTCTATACGCTAGATAGTCAGCGCTGCGA
CTATTATAGTAGCACAGACAACAACAACAACAAAGTAGCTACTGTAGTGG
TGGCTATGCTTGGGTTACTTGATGTAAGCACGGCACAGACGCTGCAGGAG
CGGCGAAAAAAGAATTACGGATTTGCCAGGGAAGGCAAGGTACTGCCGTT
CGTTTTTGTTGTTTTTGCTGCTGCTGCTGGCGGCTCTACGCTCAACGCAC
ATGCCCACAGCGCTGGCGTTTGTTGTTTTTGGCGGCTGCACCCGACCAAT
CGGGAGAGTTGGCCAACCAGAGTACGTGGTCGTTACGGCCGATGGCTCTA
TGCAAAAATATTTGGCTCTAGTATAATTTGCCTTTCAAATTTTACTAACT
TAGGCGAATTAGTGCCAAAGCCTGTGGCATATTTGCTTAGCGGTCGGTAA
CCTATTCCCCCTAGCTGGTCGTTGCTTAGTATATTTTCTTATGCGCAAAA
ACGTTAATAATAATGACAATAATTGTTTGAATTGATTAATTTTCGCTTCC
GCAGGAGACGATATAGAGTGTTAACGTTTTTTAAACGTTTTGTTTTGTTT
TTTGAAATACATTTACGTATGTAGCTCGTAGCTCGTAGCTCTGCAGGAGG
GCCGTAGAATATACTCCGTTGCTCTCTCTCGATGCTCCTTCCTGGAACGC
AGTAGGTGTTGCAATAGCAAGGCCAGCGCCTATACTACGTGTTTGCGTCG
GCGTCAGATGATAAAATGGAGTTCTTTGGCGGGTTTTGACTGTCTGCGCG
CACTTGCTCAAGCTGGATCAGGAGAGCGGTTTTGTGAACATTTCGCTGTT
TTTGGAGGCACCCTACACTGCCCAACCTTAAGAGCTGTTACGGCGATCCA
AAATTTCGCAAAGGAGAAATGACATCCCTAGCTATGTAAGAGCCACACAG
AGTGAATCCTGGGCGAATGTGTGAACTCCTTCAAGGTGGACCTAGGCCGT
GAAAATTGCCTGTTTAGGCGGCGCAATTTCCTCGATCTAAGCTGCTAGCT
GCTTCCAGCCGCGGCGAACCGATTCTGTCCAACTAACTCCAGGGACGAAA
GTTTGTACCCAACTGCGTTTACAGCTTCATCTTGACTTGCTTGGGGTTCA
CTGTACGTTCTGCATCATTTGGAGACCTCTGTGGGGAGCACGGTGCTTGT
GAATAAGTGGTTCAAAAGACCTTGTAAGGGGCTGATATTGACCGAACCCA
GCTTTCAACACAACGAGGCGTTCTTGATCATACTTTTTTGTTTTGTTTTT
TGTGTGTGCTGCAACACAGGTGCAAGAGCAATACGTAACAAATACGTAGA
AAGTGTACGGTATACTGCCCTTGGTTTGGAAAAACAGCAAGGCCGTTTCA
TGTGTCAACCTGTACTCGAATCCGTAATTTACAACGTATGAATAATTTTG
CTCATTAAATTGCATGAAACGAAAATTATTATTTTTATTTACAAATACAG
CAGCCGTGACGTTCCAAAAAACCGGGTCGGGAGCCCGCCGGGTATCAACG
CTGAGACTCGATCGTATCATACACCAGACAACCACAGTGTAGTACTGTGT
GAAATACATTGTACATTATTAGATATAGATATTTTTAGATATTTTTCAAT
TAAGAATTTTCGGAAAACTCACCGTCCCGACGCACCACAGCGCACCATTT
TTTCGGAATGCGCTCCAGTATTTTCCGTGCGTCATCGTGTTACCCAGTAT
GTCAAACATCTCCACCGCTTGCCCTCATTGGCCCAATCTGTAAAATATCT
GCACTTTCTTTTTCGTTCCTCCTCCTGCTCGCCCCACACTCCACACCATG
TACCTGGTATATGTTATACCGACAGGGGTGGCGCAATGGTCTAATAATCA
TGGTGCTGCCTCTGTTTGGCGGAAGTTCTGGGTTCGATTCCCGGTGGCAT
TTTTCTGTGCCATTTTCCGTCGCGGAAAATGCGAGAGCGTGAGTGAGCAC
AATTCGATGAAAGTCGAAGAGGGAAGAAAGTGCTGCACTCTTCTCGCGAT
AAAAATGTAGGCACGTATCGTAGTGGGAAGGCGGGAGGAGTGCCTACTAT
GTTACCCCGGGTTTGAGTTACGAAGAGAGGTGAAGCTAGAGAAAGAATAG
GGCGAAGATAATAAAAGGGACGGGGAAAAAAAAAAATGTTGAAAATATAA
AGAAAATATCGTTTAACCTTGGCGAGTTGCTCTCATTCTTTGAGCGTTGC
GGCGTCAGCCGCAAAAACATTGTATCCAGTACCTGGTAGTACCTTTTGTT
GTGCCACCAGCGATGCTTTTTTTGTGTGAATGTGGACCCTCAAGAACGTT
ACTCGTAGCTATCTCAGATACCTGATACCTCAGTGTACAATGACCGGGAT
GATCTGAACTGTGAGTGCCTAGGAAGATGTTTGGCTCCCTTACACAAAAC
CGCCGAGACAGGAGGTATAGGGGGCTTGTGTGCAGTAGATGGGGTGTCTG
AGTGACGCGAGGTTTTATAGAAAAAATACGACAAAAAAAAAAAAAAACTC
AAACTCTTGGATACAGAGCAAAGCTACTGTAGAGGAACAGTACATACAAA
TATATATACAGTACAACAGGCAGGTATTACTCGCATTGTACGACGTAACA
CAGAAAGTCGGTAGTTTGTATTGCTTGCGTGCATCACCGTGCAAGGAAGC
TAGCGCTTTTTGACATCTCCACGCACAGTTGCCGGCACAATCTGAAAGAT
GGCTTCCTAGGAAGATGTGGGTCTCTTCTATAAGAAATCCATCGACACAG
ACAGTACAGGTGGCTTGTGTCAAAATAAAATATTGTCACGAGTGGTGTGA
GGTTTGGTAGTAAAGTGGCAAATACCGAAACATCGACTAGAACAAGTCGA
TGAGTATTTGTTACGACGATGTGATCGGGTTTCGGGCTGCCTCTGTTATT
TCGCGCCATGTGCTTCTAGCGTCGGTTCACCTTACTACCCTGACTGATAT
ATTGCGTTTTGGGTGAAGACCATTCGTCGTGTGTATAGGAAACATGCACT
TACTTTGTGATAAACCATGCGGCAAGGTCCGTTCGAGATAGTTAGGTCTG
CTAGGCATGCATTGTGTTTCATGTTCATCCATGTTTCCTCTGGTATTCCT
TTGTGGCTTGACAGCGTCTAGAGATCCACTGGGCGTTGGTTTGGTGTAGG
TTTCAGACCTTGGAAGGTCTTTTCCTCAAAAAGGGTCATAAGCCTATTAC
CCCTCGACTGCCCCTGTTTAGGCCCTCGGAAAATATTGGAAACGTGTCCA
ACTCCCTCCCGGGTATATTTATACTTGCGTATCCGTCCGTAACATATGGA
GCACGAAAGTGAAGGTAGAGATGGTCGATTTATCTCTCCATCCACATGTC
GTAGGCAGCGGGGAGTTGGCAGCAGTGTCTATGTGTCGATGATGAGTGAG
GTTACATCGAATGGTGTCATTGCAAGGGCGAGTGTACCCTGTTTCGCAGC
TGGCTCAGCAGCCATCTATCATAGCTGGGCGTATAGAACAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGTTCGGCGCTATAGTTAGCTGTGAATTTG
AAGACGTTTTCTGGAGCACAGCCAAAGCTCGCGCAACGAATTCGGAACGG
CTTGGCGCGAAAAAATATGCGTGGTGTAGTGCTATTTCTCACTCCCCTGC
CAGAAGTGGTTTTGGCCTGTTTCCGTTGCGTGTGCGTTTCGTAATGTTAA
TGTTGGTGGAATGGGCGAACCGCCGGTGGATTTGTCCTTTCAGCTTTGCT
GGTTGCTGACGCCAGTGTTAGTGTCCTCACGCAAACGCGAAGAAAACAGG
ACCGGATTTTTGTCAGTATTTTTGATGCCTTTTGGTGTGCGCCCAGTCTA
CAGTGGATGCTGTTGTTTGATGCACTTTGTTCTGTTGGTTGTGGCATCTG
GAATTGCGGGCTTAAAGGCGATAGTCTTGAGGGCAACGGCGGGGTCGCGA
GGAGAATGAATCGTAGAGATTGATGTGTTTTTACTAAACTCGATCTCAAA
CCATTGTGCAACGTATGTCAAGGGTGTGATATATGTACCCTGGCCACGTT
GGCATAGAGTATCACGGGCACATGGTTTTGGTCGACTCCCAACGAACGCC
CCACGGTCAGGGCTGTTGCTGTGCTTGTCCACGTTGATAGTTTCTGGTAA
AATGGTGTCTTAATAGCCTTTTTTTCGCGCTACAGTTACATTTATAAGTG
CTGGTTTACGAACCTCTAGAGCGGTCGATTGTGCTGTTGGGAGTTTTGCG
ATGATGCCTGACTATGGTGGAAACCTCAAGGTAGCACCTCACATTCAGGT
TTGATGTACGAAACATCGCGTTTGATGTGTCAACGCTGTCAACAAGCACC
TGGCTCAGTGCGCGCACATGTGTCAGCAAATCCGGCAAAAGCCGGCGTTA
AGGGGGTTTTCACGAAAGTTCGTGACCGTTACATGTCTTTTTTATCACCG
TACCATGCTGCAGGCATATGAGGCCGTTGGAAACAAGCTCGCCGAGGAAA
ATCTTAGCCATATTTCTGAGATGATGAACACGTTCAAGGGCAGCCTCGAA
GAGTTTGCGCGCAAGTACAAGAAGGACATCAACCAGGACCCGGCTTTCCG
GCAGCAGTTTCAAGTCATGTGTGCGAGCATTGGGTGAGTCGTGCACGGCT
GGCTTGGTGTTTTTTTTTCGTTTGTGCACGCTAAGTGGTAGGGTCAAGCG
CACTTCTCGCATACTGCGTTGTGGCGCGCTGTTGTTGCCCATATGTTATA
TTCTATACTCAGGACTCGTGCAGACTCCGTGGCGAATGGGATTAGTGGCC
TGAGCGTAAGGCTGCTGTTAGACGCGAAAAGTTTTGGACGGTATCGCTTT
CTCTTTACAGCATATACTTCGTATACGAGTAGCCGCGTGTAGCAACATTT
CTTGTGGGCGGAAATGTACCCATTTGCAATGCCCCTGTAGCTCTTTCTGG
TCCATCTTATCTCGTAAGAAACAAAAAGGCACTCTCTCGTTGTTGCCCGT
CTCGCGCTTATTTTTCTTGCGGGCGGTTGGATGGGTGGGTGGGTTGATGG
CTGCGATAATTCCGCCTTTTACCAATTTTCGTCATGTGGCGACAAAGAGT
GGACCCTTTGGCGTCGAACAAGGGCTTTTGGGCGGAGGTGCTCGGGGTCG
GTGACTTTTACTACGAGCTGGCTGTGCAGATCGTAGAGATCTGCTTGGCG
ACACGAGGCGTCAACGGCGGGCTTATGGCTTTACCGGTGAGCAAAAGCCT
ACACGGACGGTACAATTGGGGAAATGTGTGCAGGCTTGGAGCGCAGGGGC
GTACCTGACAGTTGTATAGAACGGCCGAGCAAACAGTGGAGGAATTTGAC
CAACATCGGACAACTGGGAAGCGTACAACGGTGGAGTAGAAAAGCGACAC
GCGCAATGTTGATGGCGGCTTCGTCGCTTGAGCGTATGGCTGTATATCGT
GATCGATAGTTTGCTTGTTGGGTAGTATCCATTTTCCCAGAATTTTCGCA
TTCTCCTGAGTCGTAAGAAACGGTACTTATCCTCAAAGGTAAAATGGTGC
CTCACAATTTTCTTGTTCGCTACAAGAGTCATACAGCTATGATACCATAC
GCTTTTTGCGGCGCGAGAGTGCCCCTGCATGAAAACATGCACTATGCCCC
AAATTGAACTCCCAGGTGCGTTAAACCTTGATTAAACGGAACCCCTTCGG
GCTCAAGATACTCAGGTGGGGCCGACCTCTCATCAAGTTTTTGATTGTGT
TGCCGCATCCCCACAATTGGATTGGCCCTTATGGTATTGTTTTCCGTCAC
GGGAGCTCTGCAGTGAAATATCCATGGCTCATTCCCTCCGACCGTTGTAT
TTTCGTGGTGTGCGCAGGAGTTGTTGCAACGCCTCCGTACGAAGGGAAAC
CGAAAAAACAAACAAGCGATCTCTACCGATGACGTCAAAAGAGCGACCTC
CAAGCTTCAGGTCCTCGGTAGCGGGTTCACGGTAAGGCACACGGGAGTAC
GGTGGATGCTAAAAAGTTTTTCACGGTCTATGCGGACTTGGTGGTATGCT
AGCATTTCACCGTGTGTGGTATGGTGCGTGTAGCCTATCGTTGATTGTGA
TTTGACTGTCTCATGATTTTGCTTTGTCTTGCAGTACACCAATCAAATGA
TGGCTTAATGGGTCTCGCGTTTTCTGATTGGCCGGCCGTGTTCCAAGATT
GATTCGATCTACGCTGGCGTCATCGAGGGTATACAGACACTGTCAACACC
GGCAGCAGACTGTAGGCATCCGCTCGGTATGCGCTTGCCTTTGGCCGGTC
GCGCCAAACTGGCCATCACATTGTGTACGGGTCATTGCCGATAAGGACGA
TGCTCGGTAGGACCGTTTTTTTTTTAACTCGAGAGATATTGATGGTAGAC
CTTGACGGCAACCCACAGCATGTTGGTGGCTCCAGCTAAAACTCAAACAC
AAAGGGCTGTCGCAACCGGGTGTCCTGACTTTGCGACCGGGGGGGGGGGC
GAGTAATTGCTCGGGGCAAATTGGCGCCGTGACTATGCCCTCGACGACAC
ACAAACGTAGTCCACCCTTTGACGAAAAGGCTCATGTTTGCAGAGTGCCG
GCGGGAACTTGTGATATCTCTGGCACGTTTACACCGAACGCTGTTGCTGG
GCCTCGCTAACAAGGAGCAGATATGGTCTCATTGTCCACGTTCCCGTGTG
TGTTATGTTTCTGACGCCCGCCCTGTTCTCGTTGTCGCTTGAGCGCGGGA
AGTCAAACCCAGATACGTTTCAATCTAGCGATAATTGTTTTTACATGTAT
TTGCTGTTTCGAATGTATTAGAAAGGGGCAATCCCACACACCTTTCTCGG
TCGAGTGGTATCGTCGCATGCGCGGGCTGCCCTATATTGTATCAAGTAAG
CGGTCACTACTTATAGCATTCCCATCGCTATCGTGACAACGGCCCAAGGT
CCTCGAGATTGGGAAAACCACCATGGTTGTATCGGTGCCGCGCGAGCTCA
GCTCCGACCACTCAGCGGTGCTACGGTTGGCGGAAGCTTCCGGTCGCGTA
ACGGAAGCGGACGTGGCGAAAGGATTGCAATGGAACGGAGACCGGCCGCG
GAGAGTTCTGGACGAGCTCATGCAGGTACCGCGTGATATACTGTACGGAA
TCGTTTTTGTGGACAGGGTGTTATTCTAGTAACCTTAAGAGCGAAACACA
GCTATTAATAAGTACACGCCCGTCTTCCCTTCTTACTGGTCGGGTAACAA
TGATTGGCAAATCGATTGATTCCTATTGTTGTGTATATTGCGTGACGCGT
GTCTTGTTCGAGCATTCACATGGATATTCTCTTGCGCTTTTTTTTTTTTT
TATCTTCGGACGGATGGGTAAACATAAACCTTCAGCTCACAAATTTCCAC
GATTTTCATTTGTTAAGCTTTTTGAAGGTGCTCGTTGTTTTTTAAAGCTC
TCTTTAAAAAACTAAATGCTTTTTGGCCTTCTATTTTGTTTTTGTGTGAT
CGTGTCATATGTTGCGTTGATGCAGGAGGGCATGGCGTGGGTAGATGGCG
ATGGTGCTGGGCACGCGATGGGAGGCGGGGGTGGGCACCCTGCATATTTC
TTCCCGAGTCTCTGGCATGGGGAGCGATTGCTCGACGAGGGTGTGGCAGA
AAGTTGAATTTCGAGGGGTTTTTGTGGACAAGTAGAAGGTTGGAAAGTGT
ACACAGATTGGATGTTTTTGTTCACCAGCATCAATTTTTTTTTGTGGAAG
TCGCGTGAAAGGTGGCATCGTCTTGTTGCTGTGGCTACGATAGAGGGTTA
CCAGCTACGCGACGCGGATCCGTCGCCGTATTGGGAGGCTTGGATGTTTT
TCTGTCTCTCAACACACCGTTGTTACGCTATCGCAACAGCAAGTGTGCAA
GTAAGATGGAAGGATGTGGTGCCTTGGCTCCTGTAGTATACGAGTACGCT
ACTGAGAACACGGAGCTTGTTTGGCCCAACATTTATCCGGTGATGCTGGG
CAGCATGAATACTTGCTAAATAGTCAACCCTCATAGTCCAGGAGAACTTG
TTGGAGGAGCAAAGTAAATGAGGCGCCACGCGAAGGGCGTGGAGCCAGCG
TGTTTGCGGACGGATTTTGCGATGTGGCGTGACGTGACTCACCGACGTGC
GTCTTGGGGTGGGAGGCGGGGGCTTGTGTGTATCGTTCGCAGTTGTAAAC
AAGTGAAAGGTATACTGTAGGTGATTGTATGTACACCCTTATGGAGGCGT
TCAGCAATTGCCCACTCTAACCAATGCTTGTACCGGGCGGTAATGGCGAA
TCCGGTAAGCGTGAGGGCCTACGCCAATCAAACCCATCAAAAACCGTAAC
ATTGTGTGGCCTTGCGTACCTCTCCAACATACTTTTTGTATGTACCGTAA
ATTATAATTGCGTGTGTATCGGGTCTGCCTACCCACAACGTGACGTTGTA
ACCCATGAAACAACAGCAGGG back to topCoding sequence (CDS) from alignment at D-herbacea_F_contig11:1016541..1029161+ >mRNA_D-herbacea_F_contig11.859.1 ID=mRNA_D-herbacea_F_contig11.859.1|Name=mRNA_D-herbacea_F_contig11.859.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1578bp|location=Sequence derived from alignment at D-herbacea_F_contig11:1016541..1029161+ (Desmarestia herbacea DmunF female) ATGAGGCGAAGAGGAGTTGGCGTAGCTGCTGTGAAGCGCAAGGAGAAAAA CAAAGAGATGAGGCGAAGAGGAGTTGGCGTAGCTGCTGTGAAGCGCAAGG AGAAAAACAAAGAGGCATATGAGGCCGTTGGAAACAAGCTCGCCGAGGAA AATCTTAGCCATATTTCTGAGATGATGAACACGTTCAAGGGCAGCCTCGA AGAGTTTGCGCGCAAGTACAAGAAGGACATCAACCAGGACCCGGCTTTCC GGCAGCAGTTTCAAGTCATGTGTGCGAGCATTGGGCATATGAGGCCGTTG GAAACAAGCTCGCCGAGGAAAATCTTAGCCATATTTCTGAGATGATGAAC ACGTTCAAGGGCAGCCTCGAAGAGTTTGCGCGCAAGTACAAGAAGGACAT CAACCAGGACCCGGCTTTCCGGCAGCAGTTTCAAGTCATGTGTGCGAGCA TTGGAGTGGACCCTTTGGCGTCGAACAAGGGCTTTTGGGCGGAGGTGCTC GGGGTCGGTGACTTTTACTACGAGCTGGCTGTGCAGATCGTAGAGATCTG CTTGGCGACACGAGGCGTCAACGGCGGGCTTATGGCTTTACCGAGTGGAC CCTTTGGCGTCGAACAAGGGCTTTTGGGCGGAGGTGCTCGGGGTCGGTGA CTTTTACTACGAGCTGGCTGTGCAGATCGTAGAGATCTGCTTGGCGACAC GAGGCGTCAACGGCGGGCTTATGGCTTTACCGGAGTTGTTGCAACGCCTC CGTACGAAGGGAAACCGAAAAAACAAACAAGCGATCTCTACCGATGACGT CAAAAGAGCGACCTCCAAGCTTCAGGTCCTCGGTAGCGGGTTCACGGAGT TGTTGCAACGCCTCCGTACGAAGGGAAACCGAAAAAACAAACAAGCGATC TCTACCGATGACGTCAAAAGAGCGACCTCCAAGCTTCAGGTCCTCGGTAG CGGGTTCACGGTCCTCGAGATTGGGAAAACCACCATGGTTGTATCGGTGC CGCGCGAGCTCAGCTCCGACCACTCAGCGGTGCTACGGTTGGCGGAAGCT TCCGGTCGCGTAACGGAAGCGGACGTGGCGAAAGGATTGCAATGGAACGG AGACCGGCCGCGGAGAGTTCTGGACGAGCTCATGCAGGTCCTCGAGATTG GGAAAACCACCATGGTTGTATCGGTGCCGCGCGAGCTCAGCTCCGACCAC TCAGCGGTGCTACGGTTGGCGGAAGCTTCCGGTCGCGTAACGGAAGCGGA CGTGGCGAAAGGATTGCAATGGAACGGAGACCGGCCGCGGAGAGTTCTGG ACGAGCTCATGCAGGAGGGCATGGCGTGGGTAGATGGCGATGGTGCTGGG CACGCGATGGGAGGCGGGGGTGGGCACCCTGCATATTTCTTCCCGAGTCT CTGGCATGGGGAGCGATTGCTCGACGAGGGTGTGGCAGAAAGTTGAGAGG GCATGGCGTGGGTAGATGGCGATGGTGCTGGGCACGCGATGGGAGGCGGG GGTGGGCACCCTGCATATTTCTTCCCGAGTCTCTGGCATGGGGAGCGATT GCTCGACGAGGGTGTGGCAGAAAGTTGA back to top
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